Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95918.t1 | XP_013466866.1 | 82.4 | 482 | 85 | 0 | 1 | 482 | 1 | 482 | 2.60E-236 | 827.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95918.t1 | O64890 | 58.8 | 473 | 193 | 2 | 8 | 479 | 16 | 487 | 1.1e-161 | 571.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95918.t1 | A0A072VGL9 | 82.4 | 482 | 85 | 0 | 1 | 482 | 1 | 482 | 1.9e-236 | 827.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95918.t1 | MTR_1g037340 | 82.365 | 482 | 85 | 0 | 1 | 482 | 1 | 482 | 0.0 | 814 |
| MS.gene95918.t1 | MTR_8g099410 | 53.548 | 465 | 209 | 5 | 25 | 482 | 28 | 492 | 1.68e-175 | 503 |
| MS.gene95918.t1 | MTR_8g099410 | 53.548 | 465 | 209 | 5 | 25 | 482 | 28 | 492 | 3.83e-174 | 503 |
| MS.gene95918.t1 | MTR_3g080190 | 49.794 | 486 | 226 | 7 | 6 | 479 | 24 | 503 | 5.65e-169 | 486 |
| MS.gene95918.t1 | MTR_5g085730 | 49.689 | 483 | 229 | 7 | 6 | 479 | 17 | 494 | 5.40e-168 | 484 |
| MS.gene95918.t1 | MTR_4g074960 | 52.564 | 468 | 208 | 6 | 25 | 481 | 28 | 492 | 2.07e-167 | 486 |
| MS.gene95918.t1 | MTR_5g093590 | 49.385 | 488 | 230 | 8 | 11 | 481 | 13 | 500 | 1.07e-163 | 473 |
| MS.gene95918.t1 | MTR_5g010000 | 48.478 | 460 | 227 | 5 | 25 | 481 | 40 | 492 | 2.62e-144 | 423 |
| MS.gene95918.t1 | MTR_3g080810 | 47.107 | 484 | 234 | 10 | 12 | 482 | 20 | 494 | 2.76e-144 | 423 |
| MS.gene95918.t1 | MTR_5g009970 | 47.174 | 460 | 233 | 5 | 25 | 481 | 41 | 493 | 1.50e-141 | 416 |
| MS.gene95918.t1 | MTR_8g104820 | 47.346 | 471 | 232 | 8 | 22 | 482 | 27 | 491 | 8.26e-140 | 411 |
| MS.gene95918.t1 | MTR_3g117500 | 46.960 | 477 | 231 | 8 | 19 | 482 | 18 | 485 | 6.28e-137 | 404 |
| MS.gene95918.t1 | MTR_4g035930 | 44.958 | 476 | 248 | 8 | 11 | 481 | 1 | 467 | 9.05e-133 | 392 |
| MS.gene95918.t1 | MTR_3g010330 | 47.346 | 471 | 232 | 9 | 20 | 482 | 19 | 481 | 9.72e-133 | 393 |
| MS.gene95918.t1 | MTR_4g035955 | 45.378 | 476 | 245 | 9 | 11 | 481 | 1 | 466 | 2.48e-131 | 389 |
| MS.gene95918.t1 | MTR_1g088190 | 46.497 | 471 | 219 | 9 | 20 | 482 | 34 | 479 | 1.54e-126 | 377 |
| MS.gene95918.t1 | MTR_3g105230 | 42.857 | 476 | 254 | 9 | 1 | 468 | 1 | 466 | 1.54e-126 | 377 |
| MS.gene95918.t1 | MTR_4g035975 | 43.600 | 500 | 252 | 13 | 1 | 481 | 1 | 489 | 1.97e-124 | 372 |
| MS.gene95918.t1 | MTR_3g023740 | 43.469 | 490 | 259 | 9 | 1 | 482 | 1 | 480 | 8.61e-124 | 370 |
| MS.gene95918.t1 | MTR_3g113720 | 42.184 | 467 | 253 | 9 | 26 | 481 | 58 | 518 | 1.87e-121 | 365 |
| MS.gene95918.t1 | MTR_5g009970 | 45.455 | 418 | 218 | 5 | 67 | 481 | 9 | 419 | 1.37e-120 | 360 |
| MS.gene95918.t1 | MTR_8g075990 | 42.949 | 468 | 250 | 9 | 26 | 482 | 64 | 525 | 3.63e-111 | 339 |
| MS.gene95918.t1 | MTR_5g009970 | 44.110 | 399 | 213 | 5 | 86 | 481 | 1 | 392 | 2.52e-108 | 327 |
| MS.gene95918.t1 | MTR_1g037320 | 95.625 | 160 | 7 | 0 | 86 | 245 | 1 | 160 | 6.50e-99 | 299 |
| MS.gene95918.t1 | MTR_1g037320 | 96.774 | 124 | 4 | 0 | 356 | 479 | 166 | 289 | 1.27e-80 | 252 |
| MS.gene95918.t1 | MTR_2g028480 | 38.945 | 493 | 253 | 13 | 25 | 482 | 111 | 590 | 6.62e-86 | 276 |
| MS.gene95918.t1 | MTR_3g082440 | 37.597 | 516 | 269 | 17 | 8 | 481 | 87 | 591 | 1.95e-84 | 273 |
| MS.gene95918.t1 | MTR_3g090540 | 35.249 | 522 | 281 | 17 | 6 | 481 | 73 | 583 | 5.49e-84 | 271 |
| MS.gene95918.t1 | MTR_5g009970 | 45.317 | 331 | 171 | 5 | 154 | 481 | 1 | 324 | 3.22e-81 | 255 |
| MS.gene95918.t1 | MTR_1g088190 | 45.513 | 312 | 139 | 7 | 20 | 324 | 34 | 321 | 9.77e-69 | 223 |
| MS.gene95918.t1 | MTR_7g108925 | 45.570 | 158 | 84 | 2 | 326 | 482 | 43 | 199 | 6.48e-42 | 149 |
| MS.gene95918.t1 | MTR_4g047570 | 60.177 | 113 | 25 | 2 | 268 | 379 | 1 | 94 | 3.59e-33 | 121 |
| MS.gene95918.t1 | MTR_0393s0050 | 45.205 | 146 | 76 | 3 | 318 | 461 | 13 | 156 | 5.28e-33 | 124 |
| MS.gene95918.t1 | MTR_4g128810 | 36.667 | 150 | 89 | 4 | 335 | 482 | 189 | 334 | 9.31e-20 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95918.t1 | AT2G44570 | 58.678 | 484 | 192 | 3 | 7 | 482 | 9 | 492 | 0.0 | 577 |
| MS.gene95918.t1 | AT2G44550 | 58.526 | 475 | 195 | 2 | 8 | 481 | 16 | 489 | 0.0 | 562 |
| MS.gene95918.t1 | AT2G44540 | 57.505 | 473 | 200 | 1 | 8 | 479 | 16 | 488 | 0.0 | 554 |
| MS.gene95918.t1 | AT2G44560 | 57.353 | 476 | 202 | 1 | 8 | 482 | 16 | 491 | 0.0 | 540 |
| MS.gene95918.t1 | AT1G64390 | 52.941 | 476 | 215 | 6 | 14 | 482 | 16 | 489 | 7.78e-179 | 515 |
| MS.gene95918.t1 | AT4G11050 | 53.846 | 468 | 209 | 5 | 21 | 481 | 22 | 489 | 5.39e-176 | 505 |
| MS.gene95918.t1 | AT4G11050 | 53.846 | 468 | 209 | 5 | 21 | 481 | 22 | 489 | 3.60e-175 | 506 |
| MS.gene95918.t1 | AT4G11050 | 53.846 | 468 | 209 | 5 | 21 | 481 | 22 | 489 | 4.93e-175 | 506 |
| MS.gene95918.t1 | AT2G32990 | 50.320 | 469 | 224 | 6 | 20 | 479 | 34 | 502 | 4.38e-164 | 474 |
| MS.gene95918.t1 | AT2G44570 | 55.528 | 398 | 170 | 2 | 4 | 394 | 6 | 403 | 1.32e-152 | 441 |
| MS.gene95918.t1 | AT1G48930 | 50.108 | 465 | 219 | 5 | 25 | 479 | 30 | 491 | 1.52e-148 | 438 |
| MS.gene95918.t1 | AT1G23210 | 49.170 | 482 | 230 | 8 | 10 | 482 | 11 | 486 | 3.40e-146 | 427 |
| MS.gene95918.t1 | AT1G02800 | 49.787 | 470 | 223 | 7 | 19 | 482 | 37 | 499 | 4.51e-146 | 427 |
| MS.gene95918.t1 | AT1G70710 | 47.737 | 486 | 239 | 8 | 6 | 482 | 7 | 486 | 1.58e-141 | 416 |
| MS.gene95918.t1 | AT4G02290 | 48.188 | 469 | 230 | 7 | 21 | 482 | 48 | 510 | 3.71e-139 | 410 |
| MS.gene95918.t1 | AT4G23560 | 45.549 | 483 | 250 | 7 | 3 | 481 | 1 | 474 | 1.64e-135 | 400 |
| MS.gene95918.t1 | AT1G71380 | 47.035 | 489 | 240 | 10 | 3 | 482 | 1 | 479 | 1.96e-134 | 397 |
| MS.gene95918.t1 | AT4G39010 | 46.581 | 468 | 235 | 9 | 25 | 482 | 29 | 491 | 3.63e-132 | 392 |
| MS.gene95918.t1 | AT1G22880 | 46.626 | 489 | 242 | 10 | 3 | 482 | 1 | 479 | 5.01e-132 | 391 |
| MS.gene95918.t1 | AT3G43860 | 45.155 | 485 | 250 | 7 | 5 | 482 | 9 | 484 | 6.68e-131 | 388 |
| MS.gene95918.t1 | AT3G43860 | 45.155 | 485 | 250 | 7 | 5 | 482 | 9 | 484 | 6.68e-131 | 388 |
| MS.gene95918.t1 | AT4G09740 | 44.306 | 483 | 256 | 7 | 3 | 481 | 1 | 474 | 1.13e-130 | 387 |
| MS.gene95918.t1 | AT1G19940 | 45.752 | 459 | 236 | 9 | 25 | 476 | 48 | 500 | 3.42e-127 | 380 |
| MS.gene95918.t1 | AT1G19940 | 45.752 | 459 | 236 | 9 | 25 | 476 | 48 | 500 | 3.42e-127 | 380 |
| MS.gene95918.t1 | AT1G75680 | 44.667 | 450 | 236 | 8 | 26 | 468 | 58 | 501 | 6.74e-116 | 351 |
| MS.gene95918.t1 | AT4G39000 | 44.798 | 471 | 237 | 10 | 25 | 481 | 25 | 486 | 2.50e-115 | 348 |
| MS.gene95918.t1 | AT4G38990 | 44.556 | 496 | 240 | 13 | 7 | 481 | 8 | 489 | 3.77e-115 | 348 |
| MS.gene95918.t1 | AT4G02290 | 45.050 | 404 | 209 | 7 | 86 | 482 | 1 | 398 | 1.78e-104 | 318 |
| MS.gene95918.t1 | AT1G22880 | 44.938 | 405 | 205 | 9 | 86 | 482 | 1 | 395 | 1.03e-101 | 310 |
| MS.gene95918.t1 | AT1G19940 | 45.429 | 361 | 190 | 6 | 25 | 379 | 48 | 407 | 9.31e-95 | 293 |
| MS.gene95918.t1 | AT4G39010 | 43.802 | 363 | 191 | 7 | 25 | 378 | 29 | 387 | 8.21e-94 | 290 |
| MS.gene95918.t1 | AT1G65610 | 35.397 | 517 | 288 | 16 | 2 | 481 | 83 | 590 | 8.75e-81 | 263 |
| MS.gene95918.t1 | AT5G49720 | 37.219 | 489 | 267 | 14 | 25 | 482 | 108 | 587 | 1.18e-80 | 263 |
| MS.gene95918.t1 | AT1G22880 | 47.289 | 332 | 159 | 7 | 3 | 327 | 1 | 323 | 1.60e-79 | 251 |
| MS.gene95918.t1 | AT4G24260 | 36.605 | 489 | 270 | 14 | 25 | 482 | 108 | 587 | 3.04e-79 | 259 |
| MS.gene95918.t1 | AT4G38990 | 44.193 | 353 | 164 | 7 | 7 | 354 | 8 | 332 | 4.81e-77 | 245 |
| MS.gene95918.t1 | AT4G24260 | 35.574 | 357 | 197 | 10 | 25 | 352 | 108 | 460 | 2.71e-48 | 173 |
| MS.gene95918.t1 | AT4G24260 | 35.783 | 313 | 171 | 8 | 25 | 310 | 108 | 417 | 8.32e-47 | 169 |
Find 104 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTGCTCCTTCTAATATATT+AGG | 0.137971 | 1.3:+21041663 | None:intergenic |
| ATATTCCAGTAGTGGGTTTA+AGG | 0.201253 | 1.3:-21043069 | MS.gene95918:intron |
| GGGCAGCAGCATGGCTTTAT+AGG | 0.201278 | 1.3:-21042867 | MS.gene95918:CDS |
| TGCTGAAACTGCTGCTGCTT+TGG | 0.209306 | 1.3:-21043359 | MS.gene95918:CDS |
| ATGCAGTATCAGCCATAAAA+TGG | 0.222631 | 1.3:-21043543 | MS.gene95918:CDS |
| ACCATGTAACTCATATTTCT+TGG | 0.229577 | 1.3:+21041816 | None:intergenic |
| ATGTTCTTCATCGATCTTAT+AGG | 0.238276 | 1.3:+21043399 | None:intergenic |
| AGTAGGAATGACTTCCAATT+AGG | 0.250474 | 1.3:-21041606 | MS.gene95918:CDS |
| CCCCTCTCCATGTTACTCTT+TGG | 0.263890 | 1.3:+21045179 | None:intergenic |
| TCGATCTTATAGGAATTTCT+AGG | 0.273352 | 1.3:+21043409 | None:intergenic |
| CTGCTCCTTCTAATATATTA+GGG | 0.279844 | 1.3:+21041664 | None:intergenic |
| CTGGTCTTTCCCAACATTGA+TGG | 0.294669 | 1.3:+21043446 | None:intergenic |
| ATGAGTTACATGGTGGGATA+TGG | 0.319706 | 1.3:-21041807 | MS.gene95918:CDS |
| GCTGGAGACAATTTGAAGTT+AGG | 0.329508 | 1.3:-21043652 | MS.gene95918:CDS |
| TAGTAGTTGGCTCCCCTAAT+TGG | 0.338232 | 1.3:+21041592 | None:intergenic |
| ACAAACAGGATGAATTACTA+TGG | 0.338358 | 1.3:-21042888 | MS.gene95918:intron |
| CCTTCTAATATATTAGGGTT+TGG | 0.339168 | 1.3:+21041669 | None:intergenic |
| AAGAGAAGTCTCCAGAGATT+TGG | 0.359356 | 1.3:-21042220 | MS.gene95918:CDS |
| ACTTCTCCATACAAAATGTT+TGG | 0.372887 | 1.3:+21043487 | None:intergenic |
| TTGGAGGTGCAGACGACATT+GGG | 0.375469 | 1.3:-21042813 | MS.gene95918:CDS |
| ACTTCTGTTGCACCTTTAGT+TGG | 0.383502 | 1.3:-21041570 | MS.gene95918:CDS |
| AATGTTGCTTGTGCTGATTA+TGG | 0.385786 | 1.3:-21045265 | MS.gene95918:CDS |
| CTCCATGTTACTCTTTGGTT+AGG | 0.387995 | 1.3:+21045184 | None:intergenic |
| GTAGGAATGACTTCCAATTA+GGG | 0.388741 | 1.3:-21041605 | MS.gene95918:CDS |
| CTTAAAGATGGCCAAGATGC+TGG | 0.392573 | 1.3:-21045148 | MS.gene95918:CDS |
| TGCAGTATCAGCCATAAAAT+GGG | 0.392743 | 1.3:-21043542 | MS.gene95918:CDS |
| TACTGCATTTGTATACTCAT+TGG | 0.395438 | 1.3:+21043558 | None:intergenic |
| AGACAAGTATTTAGAATAAG+TGG | 0.398598 | 1.3:+21042052 | None:intergenic |
| CCAAACCCTAATATATTAGA+AGG | 0.400990 | 1.3:-21041669 | MS.gene95918:CDS |
| GTGCAAGATCAATGTTTAGT+TGG | 0.403090 | 1.3:-21042789 | MS.gene95918:CDS |
| CAACATTGATGGTCTGAATC+AGG | 0.407431 | 1.3:+21043457 | None:intergenic |
| GTTTGTTATGGTTTCAACAA+TGG | 0.414301 | 1.3:-21042115 | MS.gene95918:CDS |
| TTTGTTATGGTTTCAACAAT+GGG | 0.422337 | 1.3:-21042114 | MS.gene95918:CDS |
| TTGTATTGAGTCCAAATCTC+TGG | 0.428483 | 1.3:+21042209 | None:intergenic |
| CATGTTACTCTTTGGTTAGG+AGG | 0.436984 | 1.3:+21045187 | None:intergenic |
| GGCAGCAGCATGGCTTTATA+GGG | 0.439461 | 1.3:-21042866 | MS.gene95918:CDS |
| TGCAAGATCAATGTTTAGTT+GGG | 0.447959 | 1.3:-21042788 | MS.gene95918:CDS |
| TGCATTGCTATCGGAGGGCT+CGG | 0.448179 | 1.3:-21043323 | MS.gene95918:CDS |
| TATCACCTTAAACCCACTAC+TGG | 0.448534 | 1.3:+21043064 | None:intergenic |
| GCTAAATACTATGATTACCT+TGG | 0.461392 | 1.3:-21042832 | MS.gene95918:CDS |
| CACATCTCTTGTTCAAGCTC+AGG | 0.464765 | 1.3:-21041976 | MS.gene95918:intron |
| ATGGAGCACAATAGAGTTCA+AGG | 0.466441 | 1.3:-21043596 | MS.gene95918:CDS |
| CTAGGTGTTGACATATCCTC+TGG | 0.468045 | 1.3:+21043427 | None:intergenic |
| GCTCCATGATAGCATTGTTA+TGG | 0.468136 | 1.3:+21043612 | None:intergenic |
| TGCTTCTCTTGCATTGCTAT+CGG | 0.471475 | 1.3:-21043332 | MS.gene95918:CDS |
| ATACCATCTTGACATGTAAC+TGG | 0.472002 | 1.3:+21041717 | None:intergenic |
| GCAAAAGTATATTCCAGTAG+TGG | 0.472543 | 1.3:-21043077 | MS.gene95918:CDS |
| TTACCATAACAATGCTATCA+TGG | 0.480734 | 1.3:-21043615 | MS.gene95918:CDS |
| CCATACAAAATGTTTGGTTG+TGG | 0.488548 | 1.3:+21043493 | None:intergenic |
| AGTAATTTACCCCAGCATCT+TGG | 0.495332 | 1.3:+21045137 | None:intergenic |
| TGATTCAGACCATCAATGTT+GGG | 0.495893 | 1.3:-21043455 | MS.gene95918:CDS |
| CTGATTCAGACCATCAATGT+TGG | 0.497406 | 1.3:-21043456 | MS.gene95918:CDS |
| GCTTTATAGGGCCACAGCCT+TGG | 0.498504 | 1.3:-21042854 | MS.gene95918:CDS |
| TTAAAGATGGCCAAGATGCT+GGG | 0.499862 | 1.3:-21045147 | MS.gene95918:CDS |
| AAATACTATGATTACCTTGG+AGG | 0.502923 | 1.3:-21042829 | MS.gene95918:CDS |
| GTGCACAAATTCTTGTTGCA+AGG | 0.507769 | 1.3:-21042750 | MS.gene95918:CDS |
| ATTGTTATGGTAAATGCCAT+TGG | 0.511245 | 1.3:+21043625 | None:intergenic |
| TTCTCTTGCATTGCTATCGG+AGG | 0.517580 | 1.3:-21043329 | MS.gene95918:CDS |
| TGCACAAATTCTTGTTGCAA+GGG | 0.526552 | 1.3:-21042749 | MS.gene95918:intron |
| GTGGGTGGATACTATGATGC+TGG | 0.530357 | 1.3:-21043670 | MS.gene95918:CDS |
| CTTGGAGGTGCAGACGACAT+TGG | 0.537805 | 1.3:-21042814 | MS.gene95918:CDS |
| ACAAGAGATGTGAGATCAGA+AGG | 0.540179 | 1.3:+21041987 | None:intergenic |
| TCTCTTGCATTGCTATCGGA+GGG | 0.540594 | 1.3:-21043328 | MS.gene95918:CDS |
| CCGCTGGTGGGATACTATCA+TGG | 0.543615 | 1.3:+21043099 | None:intergenic |
| TTCTACTGCTACATTTGCAA+TGG | 0.545999 | 1.3:-21042075 | MS.gene95918:CDS |
| CAAAAGTATATTCCAGTAGT+GGG | 0.550723 | 1.3:-21043076 | MS.gene95918:CDS |
| AGTTGGGATGACAAGTATGT+TGG | 0.552848 | 1.3:-21042772 | MS.gene95918:CDS |
| GGGGATTCTGCACTTAAAGA+TGG | 0.560127 | 1.3:-21045160 | MS.gene95918:CDS |
| GGTGCAACAGAAGTAGTAGT+TGG | 0.560461 | 1.3:+21041579 | None:intergenic |
| AAGATCGATGAAGAACATCC+AGG | 0.560934 | 1.3:-21043394 | MS.gene95918:CDS |
| GACTTTGCAAACAATTCTAG+AGG | 0.562419 | 1.3:-21043128 | MS.gene95918:CDS |
| CATCATAGTATCCACCCACT+AGG | 0.575641 | 1.3:+21043674 | None:intergenic |
| CCTCTATGATGAATTTGTTG+TGG | 0.577152 | 1.3:+21041774 | None:intergenic |
| TAAGCAAGAACACCAACTAA+AGG | 0.577826 | 1.3:+21041558 | None:intergenic |
| TTTGAAGTTAGGATTTCCAA+TGG | 0.577887 | 1.3:-21043641 | MS.gene95918:CDS |
| ACCAAAGAGTAACATGGAGA+GGG | 0.579071 | 1.3:-21045180 | MS.gene95918:CDS |
| CCACAACAAATTCATCATAG+AGG | 0.584665 | 1.3:-21041774 | MS.gene95918:CDS |
| CAAACAGGATGAATTACTAT+GGG | 0.588140 | 1.3:-21042887 | MS.gene95918:intron |
| GCACCAGTTACATGTCAAGA+TGG | 0.588578 | 1.3:-21041720 | MS.gene95918:CDS |
| TCCAAGAAATATGAGTTACA+TGG | 0.588608 | 1.3:-21041817 | MS.gene95918:CDS |
| AATTACTATGGGCAGCAGCA+TGG | 0.593166 | 1.3:-21042876 | MS.gene95918:CDS |
| TCAGCAGCAAGATCAGTGCC+TGG | 0.597527 | 1.3:+21043376 | None:intergenic |
| CAATGTCGTCTGCACCTCCA+AGG | 0.603267 | 1.3:+21042815 | None:intergenic |
| GCAACCCTAAAATGCAGTGA+AGG | 0.610025 | 1.3:-21042020 | MS.gene95918:CDS |
| AAGAAATATGAGTTACATGG+TGG | 0.612793 | 1.3:-21041814 | MS.gene95918:CDS |
| AACCAAAGAGTAACATGGAG+AGG | 0.615946 | 1.3:-21045181 | MS.gene95918:CDS |
| GGAGGTGCAGACGACATTGG+GGG | 0.625200 | 1.3:-21042811 | MS.gene95918:CDS |
| ATAGTATTTAGCCAAGGCTG+TGG | 0.626527 | 1.3:+21042843 | None:intergenic |
| TAAAGATGGCCAAGATGCTG+GGG | 0.633585 | 1.3:-21045146 | MS.gene95918:intron |
| TGGAGGTGCAGACGACATTG+GGG | 0.638482 | 1.3:-21042812 | MS.gene95918:CDS |
| CTCCTAACCAAAGAGTAACA+TGG | 0.639659 | 1.3:-21045186 | MS.gene95918:CDS |
| ATGTGTGTAGATTGACCTAG+TGG | 0.643485 | 1.3:-21043689 | MS.gene95918:intron |
| AGAAATATGAGTTACATGGT+GGG | 0.646567 | 1.3:-21041813 | MS.gene95918:CDS |
| GTAATCATAGTATTTAGCCA+AGG | 0.655522 | 1.3:+21042837 | None:intergenic |
| CCAAAGAGTAACATGGAGAG+GGG | 0.660046 | 1.3:-21045179 | MS.gene95918:CDS |
| GCAGTATCAGCCATAAAATG+GGG | 0.675085 | 1.3:-21043541 | MS.gene95918:CDS |
| TAGGAATGACTTCCAATTAG+GGG | 0.678183 | 1.3:-21041604 | MS.gene95918:CDS |
| CCATGATAGTATCCCACCAG+CGG | 0.703839 | 1.3:-21043099 | MS.gene95918:CDS |
| TCAATGTTGGGAAAGACCAG+AGG | 0.708463 | 1.3:-21043443 | MS.gene95918:CDS |
| AAAATGTAGAGAAAACACCA+GGG | 0.709718 | 1.3:-21042139 | MS.gene95918:CDS |
| TGTGTGTAGATTGACCTAGT+GGG | 0.717632 | 1.3:-21043688 | MS.gene95918:intron |
| GTGTAGATTGACCTAGTGGG+TGG | 0.718661 | 1.3:-21043685 | MS.gene95918:intron |
| AAATGTAGAGAAAACACCAG+GGG | 0.725580 | 1.3:-21042138 | MS.gene95918:CDS |
| AATGTAGAGAAAACACCAGG+GGG | 0.737420 | 1.3:-21042137 | MS.gene95918:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATACTTATAAATTATCAAT+AGG | + | chr1.3:21042660-21042679 | None:intergenic | 10.0% |
| !! | AATATACTAAAAAAAAATGA+AGG | - | chr1.3:21043854-21043873 | MS.gene95918:intron | 10.0% |
| !! | AGAAATAATATATTCATTTA+GGG | - | chr1.3:21044544-21044563 | MS.gene95918:intron | 10.0% |
| !! | TAGAAATAATATATTCATTT+AGG | - | chr1.3:21044543-21044562 | MS.gene95918:intron | 10.0% |
| !!! | AAAAAAACCAAAATATTTTA+AGG | + | chr1.3:21044418-21044437 | None:intergenic | 10.0% |
| !!! | AAAAAACCAAAATATTTTAA+GGG | + | chr1.3:21044417-21044436 | None:intergenic | 10.0% |
| !!! | ATTAATTTTTTTAGTAATTG+TGG | + | chr1.3:21043929-21043948 | None:intergenic | 10.0% |
| !!! | ATTGATAATTTATAAGTATT+TGG | - | chr1.3:21042660-21042679 | MS.gene95918:intron | 10.0% |
| !!! | GTTTATAATTTTTTCTTTTT+TGG | - | chr1.3:21043683-21043702 | MS.gene95918:intron | 10.0% |
| !!! | TATAAATTTTCCATTATATT+GGG | - | chr1.3:21044603-21044622 | MS.gene95918:intron | 10.0% |
| !!! | TTATAAATTTTCCATTATAT+TGG | - | chr1.3:21044602-21044621 | MS.gene95918:intron | 10.0% |
| !!! | TTTAATTTATACATTCAAAT+TGG | + | chr1.3:21044924-21044943 | None:intergenic | 10.0% |
| !!! | TTTTTTAAAAGAAATTTACA+AGG | - | chr1.3:21044480-21044499 | MS.gene95918:intron | 10.0% |
| !! | AAAAAAAATCAACTCAAATA+TGG | + | chr1.3:21041908-21041927 | None:intergenic | 15.0% |
| !! | ACAAAATTCTCAATATTTAT+AGG | - | chr1.3:21043106-21043125 | MS.gene95918:CDS | 15.0% |
| !! | ACGAAATTCTAAATATTTAT+AGG | + | chr1.3:21042891-21042910 | None:intergenic | 15.0% |
| !! | ATTTATACATACATGAAAAT+TGG | - | chr1.3:21043947-21043966 | MS.gene95918:intron | 15.0% |
| !! | CAAAATTCTCAATATTTATA+GGG | - | chr1.3:21043107-21043126 | MS.gene95918:CDS | 15.0% |
| !! | CGAAATTCTAAATATTTATA+GGG | + | chr1.3:21042890-21042909 | None:intergenic | 15.0% |
| !! | CTAAAATGTTATGAAAAAAA+GGG | + | chr1.3:21045010-21045029 | None:intergenic | 15.0% |
| !! | GTTATTTGTCTAAAAATATA+GGG | + | chr1.3:21043150-21043169 | None:intergenic | 15.0% |
| !! | TAATTTATAAGTATTTGGTT+AGG | - | chr1.3:21042665-21042684 | MS.gene95918:intron | 15.0% |
| !! | TTTATACATACATGAAAATT+GGG | - | chr1.3:21043948-21043967 | MS.gene95918:intron | 15.0% |
| !!! | AAATTTTTAGTCAACATATT+TGG | - | chr1.3:21043017-21043036 | MS.gene95918:intron | 15.0% |
| !!! | AGAGTTGATTTTTTTTTAAA+TGG | - | chr1.3:21042114-21042133 | MS.gene95918:CDS | 15.0% |
| !!! | ATATTTCCCTTAAAATATTT+TGG | - | chr1.3:21044408-21044427 | MS.gene95918:intron | 15.0% |
| !!! | TAAAACAAAATATTGATTTG+TGG | - | chr1.3:21041861-21041880 | MS.gene95918:intron | 15.0% |
| !!! | TGTTATTTGTCTAAAAATAT+AGG | + | chr1.3:21043151-21043170 | None:intergenic | 15.0% |
| !!! | TTTGAGTTGATTTTTTTTAA+TGG | - | chr1.3:21041910-21041929 | MS.gene95918:intron | 15.0% |
| !!! | TTTTTTGGTAATTAAGTATA+TGG | - | chr1.3:21042863-21042882 | MS.gene95918:CDS | 15.0% |
| !! | AACAAAAATCAACTCAAATT+TGG | - | chr1.3:21042215-21042234 | MS.gene95918:CDS | 20.0% |
| !! | ACAATGTTATGCTATATATA+TGG | + | chr1.3:21044171-21044190 | None:intergenic | 20.0% |
| !! | ATAGGAACTAAAAATATTGA+TGG | + | chr1.3:21042995-21043014 | None:intergenic | 20.0% |
| !! | ATGTTTGTAAGAATGTTATA+AGG | - | chr1.3:21042707-21042726 | MS.gene95918:intron | 20.0% |
| !! | ATTCAAAAAATACAAAGTTC+GGG | + | chr1.3:21042034-21042053 | None:intergenic | 20.0% |
| !! | CAGAAAAATTTCAAATCATA+TGG | + | chr1.3:21042558-21042577 | None:intergenic | 20.0% |
| !! | CATTCAAAAAATACAAAGTT+CGG | + | chr1.3:21042035-21042054 | None:intergenic | 20.0% |
| !! | CCTAAAATGTTATGAAAAAA+AGG | + | chr1.3:21045011-21045030 | None:intergenic | 20.0% |
| !! | CTCTTGAAACAAAAATATAA+AGG | + | chr1.3:21044200-21044219 | None:intergenic | 20.0% |
| !! | TAAAATGAAGGAAAATTCAA+AGG | + | chr1.3:21041770-21041789 | None:intergenic | 20.0% |
| !! | TATAAAGAGAAATATTGTCT+TGG | + | chr1.3:21044355-21044374 | None:intergenic | 20.0% |
| !! | TCAAGAGCTAATTAAAATAT+GGG | - | chr1.3:21044213-21044232 | MS.gene95918:intron | 20.0% |
| !! | TTCAAGAGCTAATTAAAATA+TGG | - | chr1.3:21044212-21044231 | MS.gene95918:intron | 20.0% |
| !! | TTTGAATGTTTGTCAAAATT+AGG | + | chr1.3:21044976-21044995 | None:intergenic | 20.0% |
| !!! | AAAAAGTTTGTTGTTTTTTG+AGG | - | chr1.3:21041640-21041659 | MS.gene95918:CDS | 20.0% |
| !!! | AAAAGTTTGTTGTTTTTTGA+GGG | - | chr1.3:21041641-21041660 | MS.gene95918:CDS | 20.0% |
| !!! | AAAGTATAGTTTTGTTTTGT+AGG | - | chr1.3:21043077-21043096 | MS.gene95918:CDS | 20.0% |
| !!! | AAGTATAGTTTTGTTTTGTA+GGG | - | chr1.3:21043078-21043097 | MS.gene95918:CDS | 20.0% |
| !!! | ACATTTTCCTTTACATTTTT+AGG | + | chr1.3:21043045-21043064 | None:intergenic | 20.0% |
| !!! | CATTTTCCTTTACATTTTTA+GGG | + | chr1.3:21043044-21043063 | None:intergenic | 20.0% |
| !!! | CCTTTTTTTCATAACATTTT+AGG | - | chr1.3:21045008-21045027 | MS.gene95918:intron | 20.0% |
| !!! | GCATTTTCATTATAAAATGA+AGG | + | chr1.3:21041782-21041801 | None:intergenic | 20.0% |
| !!! | TCAATACAATATTTGATTTG+TGG | + | chr1.3:21042263-21042282 | None:intergenic | 20.0% |
| !!! | TGTTGACTAAAAATTTCTAT+AGG | + | chr1.3:21043013-21043032 | None:intergenic | 20.0% |
| !!! | TTTTTTCATAACATTTTAGG+TGG | - | chr1.3:21045011-21045030 | MS.gene95918:intron | 20.0% |
| ! | CTAAAAAAAAATGAAGGAAG+TGG | - | chr1.3:21043860-21043879 | MS.gene95918:intron | 25.0% |
| ! | GACAATACATAATATATGCA+AGG | - | chr1.3:21041994-21042013 | MS.gene95918:CDS | 25.0% |
| ! | TGTAAGAATGTTATAAGGTT+AGG | - | chr1.3:21042712-21042731 | MS.gene95918:intron | 25.0% |
| ! | TTCAAAAAATACAAAGTTCG+GGG | + | chr1.3:21042033-21042052 | None:intergenic | 25.0% |
| !! | AGACAAGTATTTAGAATAAG+TGG | + | chr1.3:21044821-21044840 | None:intergenic | 25.0% |
| !! | ATATTGATGGAACATTTTAC+AGG | + | chr1.3:21042982-21043001 | None:intergenic | 25.0% |
| !! | ATGATGATTTTACTGATAGT+AGG | - | chr1.3:21045247-21045266 | MS.gene95918:CDS | 25.0% |
| !! | TTTGTTATGGTTTCAACAAT+GGG | - | chr1.3:21044756-21044775 | MS.gene95918:intron | 25.0% |
| !!! | CAACTCAAATATTGCTTTTT+TGG | + | chr1.3:21042332-21042351 | None:intergenic | 25.0% |
| AAAAATGTAGAGAAAACACC+AGG | - | chr1.3:21044730-21044749 | MS.gene95918:intron | 30.0% | |
| AAAAGCCGATAAATGAAAAC+AGG | + | chr1.3:21042374-21042393 | None:intergenic | 30.0% | |
| AAAATGTAGAGAAAACACCA+GGG | - | chr1.3:21044731-21044750 | MS.gene95918:intron | 30.0% | |
| AAATACTATGATTACCTTGG+AGG | - | chr1.3:21044041-21044060 | MS.gene95918:intron | 30.0% | |
| AAGAAATATGAGTTACATGG+TGG | - | chr1.3:21045056-21045075 | MS.gene95918:intron | 30.0% | |
| ACAAACAGGATGAATTACTA+TGG | - | chr1.3:21043982-21044001 | MS.gene95918:intron | 30.0% | |
| ACCATGTAACTCATATTTCT+TGG | + | chr1.3:21045057-21045076 | None:intergenic | 30.0% | |
| ACTGCTCCTTCTAATATATT+AGG | + | chr1.3:21045210-21045229 | None:intergenic | 30.0% | |
| ACTTCTCCATACAAAATGTT+TGG | + | chr1.3:21043386-21043405 | None:intergenic | 30.0% | |
| AGAAATATGAGTTACATGGT+GGG | - | chr1.3:21045057-21045076 | MS.gene95918:intron | 30.0% | |
| ATGTTCTTCATCGATCTTAT+AGG | + | chr1.3:21043474-21043493 | None:intergenic | 30.0% | |
| ATTGTTATGGTAAATGCCAT+TGG | + | chr1.3:21043248-21043267 | None:intergenic | 30.0% | |
| CAAACAGGATGAATTACTAT+GGG | - | chr1.3:21043983-21044002 | MS.gene95918:intron | 30.0% | |
| CCAAACCCTAATATATTAGA+AGG | - | chr1.3:21045201-21045220 | MS.gene95918:CDS | 30.0% | |
| CCTTCTAATATATTAGGGTT+TGG | + | chr1.3:21045204-21045223 | None:intergenic | 30.0% | |
| CTGCTCCTTCTAATATATTA+GGG | + | chr1.3:21045209-21045228 | None:intergenic | 30.0% | |
| GAATCAGAGAAAAACAACAA+AGG | + | chr1.3:21041583-21041602 | None:intergenic | 30.0% | |
| GCTAAATACTATGATTACCT+TGG | - | chr1.3:21044038-21044057 | MS.gene95918:intron | 30.0% | |
| GGGAATTTATTTGTACAAAC+AGG | - | chr1.3:21043968-21043987 | MS.gene95918:intron | 30.0% | |
| GTAATCATAGTATTTAGCCA+AGG | + | chr1.3:21044036-21044055 | None:intergenic | 30.0% | |
| GTCAAGATGGTATTCAAAAA+TGG | - | chr1.3:21045163-21045182 | MS.gene95918:CDS | 30.0% | |
| TACTGCATTTGTATACTCAT+TGG | + | chr1.3:21043315-21043334 | None:intergenic | 30.0% | |
| TAGAGAACATTTATTTGCCA+TGG | - | chr1.3:21043887-21043906 | MS.gene95918:intron | 30.0% | |
| TCCAAGAAATATGAGTTACA+TGG | - | chr1.3:21045053-21045072 | MS.gene95918:intron | 30.0% | |
| TCGATCTTATAGGAATTTCT+AGG | + | chr1.3:21043464-21043483 | None:intergenic | 30.0% | |
| TGCAAGATCAATGTTTAGTT+GGG | - | chr1.3:21044082-21044101 | MS.gene95918:intron | 30.0% | |
| TTACCATAACAATGCTATCA+TGG | - | chr1.3:21043255-21043274 | MS.gene95918:intron | 30.0% | |
| TTTGGTCCCTAAAAATGTAA+AGG | - | chr1.3:21043035-21043054 | MS.gene95918:intron | 30.0% | |
| ! | AACATTTTGTATGGAGAAGT+TGG | - | chr1.3:21043386-21043405 | MS.gene95918:CDS | 30.0% |
| ! | CAAAAGTATATTCCAGTAGT+GGG | - | chr1.3:21043794-21043813 | MS.gene95918:intron | 30.0% |
| ! | GTGAACCTGTTTTCATTTAT+CGG | - | chr1.3:21042366-21042385 | MS.gene95918:intron | 30.0% |
| ! | TGCTGAAGGAAAATTTTACA+AGG | + | chr1.3:21042950-21042969 | None:intergenic | 30.0% |
| ! | TGGTGTTTTCTCTACATTTT+TGG | + | chr1.3:21044731-21044750 | None:intergenic | 30.0% |
| ! | TTTGAAGTTAGGATTTCCAA+TGG | - | chr1.3:21043229-21043248 | MS.gene95918:intron | 30.0% |
| ! | TTTTGAATGACAATGATCTG+AGG | - | chr1.3:21042046-21042065 | MS.gene95918:CDS | 30.0% |
| !! | GTTTGTTATGGTTTCAACAA+TGG | - | chr1.3:21044755-21044774 | MS.gene95918:intron | 30.0% |
| !!! | ATCGGCTTTTCTAAAACAAA+TGG | - | chr1.3:21042384-21042403 | MS.gene95918:intron | 30.0% |
| AAATGTAGAGAAAACACCAG+GGG | - | chr1.3:21044732-21044751 | MS.gene95918:intron | 35.0% | |
| ACAGGAACTAAAAATGCTGA+AGG | + | chr1.3:21042964-21042983 | None:intergenic | 35.0% | |
| AGTAGGAATGACTTCCAATT+AGG | - | chr1.3:21045264-21045283 | MS.gene95918:CDS | 35.0% | |
| ATACCATCTTGACATGTAAC+TGG | + | chr1.3:21045156-21045175 | None:intergenic | 35.0% | |
| ATGCAGTATCAGCCATAAAA+TGG | - | chr1.3:21043327-21043346 | MS.gene95918:CDS | 35.0% | |
| CATAATATATGCAAGGTCTG+AGG | - | chr1.3:21042001-21042020 | MS.gene95918:CDS | 35.0% | |
| CCACAACAAATTCATCATAG+AGG | - | chr1.3:21045096-21045115 | MS.gene95918:intron | 35.0% | |
| CCATACAAAATGTTTGGTTG+TGG | + | chr1.3:21043380-21043399 | None:intergenic | 35.0% | |
| CGTTTGTAAGAATGTTCGTT+AGG | - | chr1.3:21042755-21042774 | MS.gene95918:CDS | 35.0% | |
| GACTTTGCAAACAATTCTAG+AGG | - | chr1.3:21043742-21043761 | MS.gene95918:intron | 35.0% | |
| GTAGGAATGACTTCCAATTA+GGG | - | chr1.3:21045265-21045284 | MS.gene95918:CDS | 35.0% | |
| GTGCAAGATCAATGTTTAGT+TGG | - | chr1.3:21044081-21044100 | MS.gene95918:intron | 35.0% | |
| TAAGCAAGAACACCAACTAA+AGG | + | chr1.3:21045315-21045334 | None:intergenic | 35.0% | |
| TACCAAATGAGCTAAGATCA+CGG | + | chr1.3:21042183-21042202 | None:intergenic | 35.0% | |
| TAGGAATGACTTCCAATTAG+GGG | - | chr1.3:21045266-21045285 | MS.gene95918:CDS | 35.0% | |
| TGATCTTAGCTCATTTGGTA+AGG | - | chr1.3:21042183-21042202 | MS.gene95918:CDS | 35.0% | |
| TGATTCAGACCATCAATGTT+GGG | - | chr1.3:21043415-21043434 | MS.gene95918:CDS | 35.0% | |
| TGCACAAATTCTTGTTGCAA+GGG | - | chr1.3:21044121-21044140 | MS.gene95918:intron | 35.0% | |
| TGCAGTATCAGCCATAAAAT+GGG | - | chr1.3:21043328-21043347 | MS.gene95918:CDS | 35.0% | |
| TTCTACTGCTACATTTGCAA+TGG | - | chr1.3:21044795-21044814 | MS.gene95918:intron | 35.0% | |
| TTGTATTGAGTCCAAATCTC+TGG | + | chr1.3:21044664-21044683 | None:intergenic | 35.0% | |
| TTTGCCATGGTTACAATGAT+TGG | - | chr1.3:21043900-21043919 | MS.gene95918:intron | 35.0% | |
| ! | ATCACCTTCACTGCATTTTA+GGG | + | chr1.3:21044857-21044876 | None:intergenic | 35.0% |
| ! | CCACAACCAAACATTTTGTA+TGG | - | chr1.3:21043377-21043396 | MS.gene95918:CDS | 35.0% |
| ! | GCAAAAGTATATTCCAGTAG+TGG | - | chr1.3:21043793-21043812 | MS.gene95918:intron | 35.0% |
| !! | AATGTTGCTTGTGCTGATTA+TGG | - | chr1.3:21041605-21041624 | MS.gene95918:CDS | 35.0% |
| !! | ATATTCCAGTAGTGGGTTTA+AGG | - | chr1.3:21043801-21043820 | MS.gene95918:intron | 35.0% |
| !! | CCTCTATGATGAATTTGTTG+TGG | + | chr1.3:21045099-21045118 | None:intergenic | 35.0% |
| !!! | ATTTTAGGTGGACTACATCT+TGG | - | chr1.3:21045023-21045042 | MS.gene95918:intron | 35.0% |
| !!! | TGCTTTTTTGGTAGTGTTTG+AGG | + | chr1.3:21042320-21042339 | None:intergenic | 35.0% |
| !!! | TTTTAGGTGGACTACATCTT+GGG | - | chr1.3:21045024-21045043 | MS.gene95918:intron | 35.0% |
| AACCAAAGAGTAACATGGAG+AGG | - | chr1.3:21041689-21041708 | MS.gene95918:CDS | 40.0% | |
| AACTGCATGGCCCAATATAA+TGG | + | chr1.3:21044616-21044635 | None:intergenic | 40.0% | |
| AAGAGAAGTCTCCAGAGATT+TGG | - | chr1.3:21044650-21044669 | MS.gene95918:intron | 40.0% | |
| AAGATCGATGAAGAACATCC+AGG | - | chr1.3:21043476-21043495 | MS.gene95918:CDS | 40.0% | |
| AATGTAGAGAAAACACCAGG+GGG | - | chr1.3:21044733-21044752 | MS.gene95918:intron | 40.0% | |
| ACAAGAGATGTGAGATCAGA+AGG | + | chr1.3:21044886-21044905 | None:intergenic | 40.0% | |
| ACCAAAGAGTAACATGGAGA+GGG | - | chr1.3:21041690-21041709 | MS.gene95918:CDS | 40.0% | |
| ACCAAATGAGCTAAGATCAC+GGG | + | chr1.3:21042182-21042201 | None:intergenic | 40.0% | |
| ACTTCTGTTGCACCTTTAGT+TGG | - | chr1.3:21045300-21045319 | MS.gene95918:CDS | 40.0% | |
| AGTAATTTACCCCAGCATCT+TGG | + | chr1.3:21041736-21041755 | None:intergenic | 40.0% | |
| AGTTGGGATGACAAGTATGT+TGG | - | chr1.3:21044098-21044117 | MS.gene95918:intron | 40.0% | |
| ATAGTATTTAGCCAAGGCTG+TGG | + | chr1.3:21044030-21044049 | None:intergenic | 40.0% | |
| ATGGAGCACAATAGAGTTCA+AGG | - | chr1.3:21043274-21043293 | MS.gene95918:intron | 40.0% | |
| ATGTGTGTAGATTGACCTAG+TGG | - | chr1.3:21043181-21043200 | MS.gene95918:intron | 40.0% | |
| CATGTTACTCTTTGGTTAGG+AGG | + | chr1.3:21041686-21041705 | None:intergenic | 40.0% | |
| CCAACCTAAAACAAACTGCA+TGG | + | chr1.3:21044629-21044648 | None:intergenic | 40.0% | |
| CTCCATGTTACTCTTTGGTT+AGG | + | chr1.3:21041689-21041708 | None:intergenic | 40.0% | |
| CTCCTAACCAAAGAGTAACA+TGG | - | chr1.3:21041684-21041703 | MS.gene95918:CDS | 40.0% | |
| CTGATTCAGACCATCAATGT+TGG | - | chr1.3:21043414-21043433 | MS.gene95918:CDS | 40.0% | |
| GCAATCATGCAAAGCAAGTA+TGG | - | chr1.3:21043588-21043607 | MS.gene95918:CDS | 40.0% | |
| GCAGTATCAGCCATAAAATG+GGG | - | chr1.3:21043329-21043348 | MS.gene95918:CDS | 40.0% | |
| GCTCCATGATAGCATTGTTA+TGG | + | chr1.3:21043261-21043280 | None:intergenic | 40.0% | |
| GTGCACAAATTCTTGTTGCA+AGG | - | chr1.3:21044120-21044139 | MS.gene95918:intron | 40.0% | |
| GTTGCCAATCATTGTAACCA+TGG | + | chr1.3:21043907-21043926 | None:intergenic | 40.0% | |
| TAATTCCTTAACCAATGCCC+CGG | - | chr1.3:21044373-21044392 | MS.gene95918:intron | 40.0% | |
| TATCACCTTAAACCCACTAC+TGG | + | chr1.3:21043809-21043828 | None:intergenic | 40.0% | |
| TGCTTCTCTTGCATTGCTAT+CGG | - | chr1.3:21043538-21043557 | MS.gene95918:CDS | 40.0% | |
| TGTGTGTAGATTGACCTAGT+GGG | - | chr1.3:21043182-21043201 | MS.gene95918:intron | 40.0% | |
| TTAAAGATGGCCAAGATGCT+GGG | - | chr1.3:21041723-21041742 | MS.gene95918:CDS | 40.0% | |
| ! | AATATACTTTTGCCGCTGGT+GGG | + | chr1.3:21043786-21043805 | None:intergenic | 40.0% |
| ! | ATGAGTTACATGGTGGGATA+TGG | - | chr1.3:21045063-21045082 | MS.gene95918:intron | 40.0% |
| ! | CAACATTGATGGTCTGAATC+AGG | + | chr1.3:21043416-21043435 | None:intergenic | 40.0% |
| ! | CATCACCTTCACTGCATTTT+AGG | + | chr1.3:21044858-21044877 | None:intergenic | 40.0% |
| ! | GCTGGAGACAATTTGAAGTT+AGG | - | chr1.3:21043218-21043237 | MS.gene95918:intron | 40.0% |
| ! | GTAATCTGCTCCCCATTTTA+TGG | + | chr1.3:21043342-21043361 | None:intergenic | 40.0% |
| ! | TTTTGTTAACCAGTACCTCC+GGG | - | chr1.3:21044236-21044255 | MS.gene95918:intron | 40.0% |
| !! | GTTTTGTTAACCAGTACCTC+CGG | - | chr1.3:21044235-21044254 | MS.gene95918:intron | 40.0% |
| !!! | CCATGCAGTTTGTTTTAGGT+TGG | - | chr1.3:21044626-21044645 | MS.gene95918:intron | 40.0% |
| !!! | TTTTTTGAGGGACAACGTTC+AGG | - | chr1.3:21041653-21041672 | MS.gene95918:CDS | 40.0% |
| AATTACTATGGGCAGCAGCA+TGG | - | chr1.3:21043994-21044013 | MS.gene95918:intron | 45.0% | |
| AATTCCTTAACCAATGCCCC+GGG | - | chr1.3:21044374-21044393 | MS.gene95918:intron | 45.0% | |
| ATACACACACACAAGTTCCG+AGG | - | chr1.3:21042288-21042307 | MS.gene95918:intron | 45.0% | |
| CACATCTCTTGTTCAAGCTC+AGG | - | chr1.3:21044894-21044913 | MS.gene95918:intron | 45.0% | |
| CATCATAGTATCCACCCACT+AGG | + | chr1.3:21043199-21043218 | None:intergenic | 45.0% | |
| CCAAAGAGTAACATGGAGAG+GGG | - | chr1.3:21041691-21041710 | MS.gene95918:CDS | 45.0% | |
| CCAAATGAGCTAAGATCACG+GGG | + | chr1.3:21042181-21042200 | None:intergenic | 45.0% | |
| CTTAAAGATGGCCAAGATGC+TGG | - | chr1.3:21041722-21041741 | MS.gene95918:CDS | 45.0% | |
| GCAACCCTAAAATGCAGTGA+AGG | - | chr1.3:21044850-21044869 | MS.gene95918:intron | 45.0% | |
| GCACCAGTTACATGTCAAGA+TGG | - | chr1.3:21045150-21045169 | MS.gene95918:CDS | 45.0% | |
| GGGGATTCTGCACTTAAAGA+TGG | - | chr1.3:21041710-21041729 | MS.gene95918:CDS | 45.0% | |
| GGTGCAACAGAAGTAGTAGT+TGG | + | chr1.3:21045294-21045313 | None:intergenic | 45.0% | |
| TAAAGATGGCCAAGATGCTG+GGG | - | chr1.3:21041724-21041743 | MS.gene95918:CDS | 45.0% | |
| TCAATGTTGGGAAAGACCAG+AGG | - | chr1.3:21043427-21043446 | MS.gene95918:CDS | 45.0% | |
| TCTCTTGCATTGCTATCGGA+GGG | - | chr1.3:21043542-21043561 | MS.gene95918:CDS | 45.0% | |
| TGAAACCATAACAAACCCCC+TGG | + | chr1.3:21044751-21044770 | None:intergenic | 45.0% | |
| TTCTCTTGCATTGCTATCGG+AGG | - | chr1.3:21043541-21043560 | MS.gene95918:CDS | 45.0% | |
| TTTGTTAACCAGTACCTCCG+GGG | - | chr1.3:21044237-21044256 | MS.gene95918:intron | 45.0% | |
| ! | AGTGTTTGAGGTTCGAACCT+CGG | + | chr1.3:21042308-21042327 | None:intergenic | 45.0% |
| ! | CTGGAATATACTTTTGCCGC+TGG | + | chr1.3:21043790-21043809 | None:intergenic | 45.0% |
| ! | CTGGTCTTTCCCAACATTGA+TGG | + | chr1.3:21043427-21043446 | None:intergenic | 45.0% |
| ! | GAATATACTTTTGCCGCTGG+TGG | + | chr1.3:21043787-21043806 | None:intergenic | 45.0% |
| ! | TAGTAGTTGGCTCCCCTAAT+TGG | + | chr1.3:21045281-21045300 | None:intergenic | 45.0% |
| !! | AAACACCAGGGGGTTTGTTA+TGG | - | chr1.3:21044743-21044762 | MS.gene95918:intron | 45.0% |
| !! | CTAGGTGTTGACATATCCTC+TGG | + | chr1.3:21043446-21043465 | None:intergenic | 45.0% |
| !! | TGGGCCATGCAGTTTGTTTT+AGG | - | chr1.3:21044622-21044641 | MS.gene95918:intron | 45.0% |
| !!! | TTACTATATATAATATTTTT+TGG | - | chr1.3:21042848-21042867 | MS.gene95918:CDS | 5.0% |
| AAATATTAGCCAGTGCCCCC+GGG | + | chr1.3:21044394-21044413 | None:intergenic | 50.0% | |
| ATTCCTTAACCAATGCCCCG+GGG | - | chr1.3:21044375-21044394 | MS.gene95918:intron | 50.0% | |
| CCATGATAGTATCCCACCAG+CGG | - | chr1.3:21043771-21043790 | MS.gene95918:intron | 50.0% | |
| CCCCGTGATCTTAGCTCATT+TGG | - | chr1.3:21042178-21042197 | MS.gene95918:CDS | 50.0% | |
| CCCCTCTCCATGTTACTCTT+TGG | + | chr1.3:21041694-21041713 | None:intergenic | 50.0% | |
| CGAGCTTAGCTCAGTCGATA+AGG | - | chr1.3:21041972-21041991 | MS.gene95918:intron | 50.0% | |
| GAAATATTAGCCAGTGCCCC+CGG | + | chr1.3:21044395-21044414 | None:intergenic | 50.0% | |
| GAGCTAAGATCACGGGGAAT+GGG | + | chr1.3:21042175-21042194 | None:intergenic | 50.0% | |
| GTGGGTGGATACTATGATGC+TGG | - | chr1.3:21043200-21043219 | MS.gene95918:intron | 50.0% | |
| GTGTAGATTGACCTAGTGGG+TGG | - | chr1.3:21043185-21043204 | MS.gene95918:intron | 50.0% | |
| TAGTCCCTTAACTAGTGCCC+CGG | + | chr1.3:21044257-21044276 | None:intergenic | 50.0% | |
| TGAGCTAAGATCACGGGGAA+TGG | + | chr1.3:21042176-21042195 | None:intergenic | 50.0% | |
| ! | TGCTGAAACTGCTGCTGCTT+TGG | - | chr1.3:21043511-21043530 | MS.gene95918:CDS | 50.0% |
| ! | TTGGAGGTGCAGACGACATT+GGG | - | chr1.3:21044057-21044076 | MS.gene95918:intron | 50.0% |
| !! | GGCAGCAGCATGGCTTTATA+GGG | - | chr1.3:21044004-21044023 | MS.gene95918:intron | 50.0% |
| AATATTAGCCAGTGCCCCCG+GGG | + | chr1.3:21044393-21044412 | None:intergenic | 55.0% | |
| CAATGTCGTCTGCACCTCCA+AGG | + | chr1.3:21044058-21044077 | None:intergenic | 55.0% | |
| CCGCTGGTGGGATACTATCA+TGG | + | chr1.3:21043774-21043793 | None:intergenic | 55.0% | |
| GCTTTATAGGGCCACAGCCT+TGG | - | chr1.3:21044016-21044035 | MS.gene95918:intron | 55.0% | |
| TCAGCAGCAAGATCAGTGCC+TGG | + | chr1.3:21043497-21043516 | None:intergenic | 55.0% | |
| TGCATTGCTATCGGAGGGCT+CGG | - | chr1.3:21043547-21043566 | MS.gene95918:CDS | 55.0% | |
| TTCCTTAACCAATGCCCCGG+GGG | - | chr1.3:21044376-21044395 | MS.gene95918:intron | 55.0% | |
| ! | ACCTCCGGGGCACTAGTTAA+GGG | - | chr1.3:21044250-21044269 | MS.gene95918:intron | 55.0% |
| ! | CTTGGAGGTGCAGACGACAT+TGG | - | chr1.3:21044056-21044075 | MS.gene95918:intron | 55.0% |
| ! | TACCTCCGGGGCACTAGTTA+AGG | - | chr1.3:21044249-21044268 | MS.gene95918:intron | 55.0% |
| ! | TGGAGGTGCAGACGACATTG+GGG | - | chr1.3:21044058-21044077 | MS.gene95918:intron | 55.0% |
| !! | GGGCAGCAGCATGGCTTTAT+AGG | - | chr1.3:21044003-21044022 | MS.gene95918:intron | 55.0% |
| TCCCTTAACTAGTGCCCCGG+AGG | + | chr1.3:21044254-21044273 | None:intergenic | 60.0% | |
| ! | AACTAGTGCCCCGGAGGTAC+TGG | + | chr1.3:21044248-21044267 | None:intergenic | 60.0% |
| ! | GGAGGTGCAGACGACATTGG+GGG | - | chr1.3:21044059-21044078 | MS.gene95918:intron | 60.0% |
| !! | TGCCCCCGGGGCATTGGTTA+AGG | + | chr1.3:21044381-21044400 | None:intergenic | 65.0% |
| ! | AACCAATGCCCCGGGGGCAC+TGG | - | chr1.3:21044382-21044401 | MS.gene95918:intron | 70.0% |
| AGCCAGTGCCCCCGGGGCAT+TGG | + | chr1.3:21044387-21044406 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 21041548 | 21045344 | 21041548 | ID=MS.gene95918 |
| chr1.3 | mRNA | 21041548 | 21045344 | 21041548 | ID=MS.gene95918.t1;Parent=MS.gene95918 |
| chr1.3 | exon | 21045147 | 21045344 | 21045147 | ID=MS.gene95918.t1.exon1;Parent=MS.gene95918.t1 |
| chr1.3 | CDS | 21045147 | 21045344 | 21045147 | ID=cds.MS.gene95918.t1;Parent=MS.gene95918.t1 |
| chr1.3 | exon | 21043288 | 21043701 | 21043288 | ID=MS.gene95918.t1.exon2;Parent=MS.gene95918.t1 |
| chr1.3 | CDS | 21043288 | 21043701 | 21043288 | ID=cds.MS.gene95918.t1;Parent=MS.gene95918.t1 |
| chr1.3 | exon | 21043070 | 21043156 | 21043070 | ID=MS.gene95918.t1.exon3;Parent=MS.gene95918.t1 |
| chr1.3 | CDS | 21043070 | 21043156 | 21043070 | ID=cds.MS.gene95918.t1;Parent=MS.gene95918.t1 |
| chr1.3 | exon | 21042750 | 21042902 | 21042750 | ID=MS.gene95918.t1.exon4;Parent=MS.gene95918.t1 |
| chr1.3 | CDS | 21042750 | 21042902 | 21042750 | ID=cds.MS.gene95918.t1;Parent=MS.gene95918.t1 |
| chr1.3 | exon | 21041977 | 21042258 | 21041977 | ID=MS.gene95918.t1.exon5;Parent=MS.gene95918.t1 |
| chr1.3 | CDS | 21041977 | 21042258 | 21041977 | ID=cds.MS.gene95918.t1;Parent=MS.gene95918.t1 |
| chr1.3 | exon | 21041548 | 21041862 | 21041548 | ID=MS.gene95918.t1.exon6;Parent=MS.gene95918.t1 |
| chr1.3 | CDS | 21041548 | 21041862 | 21041548 | ID=cds.MS.gene95918.t1;Parent=MS.gene95918.t1 |
| Gene Sequence |
| Protein sequence |