Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29940.t1 | XP_003630905.1 | 98.8 | 494 | 6 | 0 | 1 | 494 | 1 | 494 | 1.40E-288 | 1001.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29940.t1 | Q9CAC1 | 79.3 | 493 | 97 | 3 | 1 | 493 | 1 | 488 | 5.1e-236 | 818.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29940.t1 | G7LAH3 | 98.8 | 494 | 6 | 0 | 1 | 494 | 1 | 494 | 9.8e-289 | 1001.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene29940 | 0.82916 | 6.01E-55 | -1.69E-46 |
| MS.gene050707 | MS.gene29940 | 0.840866 | 6.72E-58 | -1.69E-46 |
| MS.gene050710 | MS.gene29940 | 0.825957 | 3.53E-54 | -1.69E-46 |
| MS.gene051914 | MS.gene29940 | 0.842672 | 2.24E-58 | -1.69E-46 |
| MS.gene052169 | MS.gene29940 | 0.819638 | 1.05E-52 | -1.69E-46 |
| MS.gene052209 | MS.gene29940 | 0.818427 | 1.97E-52 | -1.69E-46 |
| MS.gene052308 | MS.gene29940 | 0.873152 | 1.83E-67 | -1.69E-46 |
| MS.gene053108 | MS.gene29940 | 0.82873 | 7.64E-55 | -1.69E-46 |
| MS.gene053173 | MS.gene29940 | 0.826652 | 2.41E-54 | -1.69E-46 |
| MS.gene053348 | MS.gene29940 | 0.803023 | 4.25E-49 | -1.69E-46 |
| MS.gene054551 | MS.gene29940 | 0.834865 | 2.34E-56 | -1.69E-46 |
| MS.gene054593 | MS.gene29940 | 0.837741 | 4.35E-57 | -1.69E-46 |
| MS.gene054633 | MS.gene29940 | 0.826195 | 3.10E-54 | -1.69E-46 |
| MS.gene054662 | MS.gene29940 | 0.834141 | 3.56E-56 | -1.69E-46 |
| MS.gene054850 | MS.gene29940 | 0.812962 | 3.26E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene29940 | 0.831886 | 1.29E-55 | -1.69E-46 |
| MS.gene055308 | MS.gene29940 | 0.836692 | 8.06E-57 | -1.69E-46 |
| MS.gene055578 | MS.gene29940 | 0.825035 | 5.84E-54 | -1.69E-46 |
| MS.gene056041 | MS.gene29940 | 0.807125 | 5.89E-50 | -1.69E-46 |
| MS.gene05640 | MS.gene29940 | 0.848833 | 4.76E-60 | -1.69E-46 |
| MS.gene05652 | MS.gene29940 | 0.879855 | 8.86E-70 | -1.69E-46 |
| MS.gene057367 | MS.gene29940 | 0.817813 | 2.71E-52 | -1.69E-46 |
| MS.gene057669 | MS.gene29940 | 0.879399 | 1.29E-69 | -1.69E-46 |
| MS.gene058128 | MS.gene29940 | 0.885337 | 8.87E-72 | -1.69E-46 |
| MS.gene058853 | MS.gene29940 | 0.871217 | 8.09E-67 | -1.69E-46 |
| MS.gene05926 | MS.gene29940 | 0.847105 | 1.43E-59 | -1.69E-46 |
| MS.gene05960 | MS.gene29940 | 0.819216 | 1.31E-52 | -1.69E-46 |
| MS.gene059616 | MS.gene29940 | 0.886164 | 4.34E-72 | -1.69E-46 |
| MS.gene059844 | MS.gene29940 | 0.801197 | 1.01E-48 | -1.69E-46 |
| MS.gene059905 | MS.gene29940 | 0.830434 | 2.94E-55 | -1.69E-46 |
| MS.gene06093 | MS.gene29940 | 0.848773 | 4.95E-60 | -1.69E-46 |
| MS.gene060985 | MS.gene29940 | 0.804371 | 2.23E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29940.t1 | MTR_8g104820 | 98.785 | 494 | 6 | 0 | 1 | 494 | 1 | 494 | 0.0 | 1010 |
| MS.gene29940.t1 | MTR_3g117500 | 62.025 | 474 | 173 | 5 | 23 | 493 | 18 | 487 | 0.0 | 602 |
| MS.gene29940.t1 | MTR_4g035930 | 59.267 | 464 | 181 | 4 | 30 | 493 | 15 | 470 | 0.0 | 565 |
| MS.gene29940.t1 | MTR_4g035955 | 58.281 | 477 | 191 | 4 | 17 | 493 | 1 | 469 | 0.0 | 564 |
| MS.gene29940.t1 | MTR_3g080810 | 58.280 | 465 | 192 | 2 | 29 | 493 | 34 | 496 | 0.0 | 553 |
| MS.gene29940.t1 | MTR_4g035975 | 58.333 | 492 | 186 | 8 | 14 | 494 | 10 | 493 | 0.0 | 548 |
| MS.gene29940.t1 | MTR_1g088190 | 60.086 | 466 | 163 | 4 | 27 | 491 | 36 | 479 | 0.0 | 546 |
| MS.gene29940.t1 | MTR_3g010330 | 55.484 | 465 | 200 | 4 | 30 | 493 | 25 | 483 | 4.61e-180 | 514 |
| MS.gene29940.t1 | MTR_8g099410 | 50.105 | 475 | 224 | 8 | 26 | 492 | 24 | 493 | 6.20e-161 | 466 |
| MS.gene29940.t1 | MTR_8g099410 | 50.105 | 475 | 224 | 8 | 26 | 492 | 24 | 493 | 7.01e-160 | 468 |
| MS.gene29940.t1 | MTR_5g009970 | 47.925 | 482 | 231 | 10 | 14 | 488 | 23 | 491 | 7.63e-158 | 458 |
| MS.gene29940.t1 | MTR_5g010000 | 50.214 | 468 | 215 | 9 | 26 | 488 | 36 | 490 | 1.21e-157 | 457 |
| MS.gene29940.t1 | MTR_3g080190 | 48.560 | 486 | 237 | 8 | 14 | 490 | 24 | 505 | 2.27e-155 | 452 |
| MS.gene29940.t1 | MTR_5g085730 | 45.885 | 486 | 250 | 8 | 14 | 490 | 15 | 496 | 4.93e-151 | 441 |
| MS.gene29940.t1 | MTR_4g074960 | 49.787 | 470 | 222 | 9 | 28 | 488 | 26 | 490 | 1.73e-146 | 433 |
| MS.gene29940.t1 | MTR_1g037340 | 48.185 | 496 | 233 | 10 | 5 | 491 | 2 | 482 | 8.86e-143 | 419 |
| MS.gene29940.t1 | MTR_5g093590 | 44.289 | 499 | 261 | 10 | 1 | 488 | 6 | 498 | 1.27e-142 | 419 |
| MS.gene29940.t1 | MTR_3g105230 | 44.934 | 454 | 233 | 8 | 30 | 480 | 30 | 469 | 2.40e-139 | 410 |
| MS.gene29940.t1 | MTR_3g023740 | 44.606 | 482 | 246 | 10 | 14 | 488 | 10 | 477 | 1.42e-136 | 403 |
| MS.gene29940.t1 | MTR_5g009970 | 47.156 | 422 | 205 | 9 | 72 | 488 | 9 | 417 | 1.06e-134 | 396 |
| MS.gene29940.t1 | MTR_5g009970 | 45.658 | 403 | 201 | 9 | 91 | 488 | 1 | 390 | 4.06e-122 | 363 |
| MS.gene29940.t1 | MTR_3g113720 | 41.545 | 479 | 249 | 10 | 26 | 488 | 53 | 516 | 1.25e-112 | 343 |
| MS.gene29940.t1 | MTR_1g088190 | 57.929 | 309 | 108 | 3 | 27 | 334 | 36 | 323 | 3.26e-112 | 335 |
| MS.gene29940.t1 | MTR_8g075990 | 41.578 | 469 | 253 | 10 | 31 | 488 | 64 | 522 | 1.00e-108 | 333 |
| MS.gene29940.t1 | MTR_5g009970 | 46.988 | 332 | 164 | 6 | 159 | 488 | 1 | 322 | 1.29e-99 | 303 |
| MS.gene29940.t1 | MTR_2g028480 | 39.306 | 519 | 260 | 18 | 14 | 492 | 88 | 591 | 1.98e-89 | 286 |
| MS.gene29940.t1 | MTR_3g082440 | 36.914 | 512 | 273 | 18 | 12 | 487 | 91 | 588 | 3.35e-84 | 272 |
| MS.gene29940.t1 | MTR_3g090540 | 33.588 | 524 | 281 | 19 | 9 | 487 | 79 | 580 | 6.42e-81 | 263 |
| MS.gene29940.t1 | MTR_7g108925 | 62.658 | 158 | 58 | 1 | 334 | 491 | 43 | 199 | 5.23e-64 | 207 |
| MS.gene29940.t1 | MTR_0393s0050 | 55.862 | 145 | 62 | 2 | 334 | 477 | 20 | 163 | 1.51e-46 | 160 |
| MS.gene29940.t1 | MTR_1g037320 | 48.780 | 164 | 78 | 3 | 91 | 252 | 1 | 160 | 1.02e-34 | 132 |
| MS.gene29940.t1 | MTR_1g037320 | 51.613 | 124 | 57 | 2 | 366 | 488 | 168 | 289 | 1.76e-31 | 123 |
| MS.gene29940.t1 | MTR_4g128810 | 39.333 | 150 | 82 | 4 | 341 | 487 | 187 | 330 | 7.06e-24 | 103 |
| MS.gene29940.t1 | MTR_7g108920 | 41.935 | 93 | 53 | 1 | 240 | 332 | 86 | 177 | 1.47e-14 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29940.t1 | AT1G70710 | 79.310 | 493 | 97 | 3 | 1 | 493 | 1 | 488 | 0.0 | 813 |
| MS.gene29940.t1 | AT1G23210 | 76.181 | 487 | 113 | 2 | 7 | 493 | 5 | 488 | 0.0 | 783 |
| MS.gene29940.t1 | AT4G02290 | 62.366 | 465 | 172 | 2 | 27 | 491 | 49 | 510 | 0.0 | 588 |
| MS.gene29940.t1 | AT4G39010 | 59.701 | 469 | 184 | 4 | 29 | 494 | 28 | 494 | 0.0 | 585 |
| MS.gene29940.t1 | AT1G02800 | 61.987 | 463 | 171 | 3 | 29 | 491 | 42 | 499 | 0.0 | 569 |
| MS.gene29940.t1 | AT4G39000 | 54.449 | 472 | 210 | 4 | 26 | 494 | 21 | 490 | 0.0 | 525 |
| MS.gene29940.t1 | AT4G38990 | 54.806 | 489 | 208 | 8 | 15 | 494 | 9 | 493 | 1.53e-180 | 515 |
| MS.gene29940.t1 | AT1G22880 | 53.846 | 481 | 216 | 3 | 12 | 492 | 6 | 480 | 6.34e-180 | 513 |
| MS.gene29940.t1 | AT1G71380 | 53.015 | 481 | 220 | 3 | 12 | 492 | 6 | 480 | 5.19e-178 | 508 |
| MS.gene29940.t1 | AT4G02290 | 59.850 | 401 | 158 | 2 | 91 | 491 | 1 | 398 | 4.95e-169 | 483 |
| MS.gene29940.t1 | AT1G64390 | 51.688 | 474 | 216 | 8 | 27 | 492 | 22 | 490 | 6.88e-162 | 473 |
| MS.gene29940.t1 | AT4G11050 | 50.851 | 470 | 218 | 8 | 27 | 488 | 23 | 487 | 1.30e-159 | 464 |
| MS.gene29940.t1 | AT4G11050 | 50.851 | 470 | 218 | 8 | 27 | 488 | 23 | 487 | 2.37e-159 | 466 |
| MS.gene29940.t1 | AT4G11050 | 50.851 | 470 | 218 | 8 | 27 | 488 | 23 | 487 | 3.29e-159 | 466 |
| MS.gene29940.t1 | AT4G09740 | 50.418 | 478 | 222 | 7 | 14 | 488 | 7 | 472 | 4.22e-158 | 457 |
| MS.gene29940.t1 | AT4G23560 | 50.209 | 478 | 222 | 8 | 14 | 488 | 8 | 472 | 6.89e-158 | 457 |
| MS.gene29940.t1 | AT4G39010 | 58.127 | 363 | 148 | 3 | 29 | 388 | 28 | 389 | 1.02e-154 | 446 |
| MS.gene29940.t1 | AT2G32990 | 46.976 | 496 | 233 | 10 | 17 | 488 | 13 | 502 | 1.08e-148 | 436 |
| MS.gene29940.t1 | AT1G22880 | 52.488 | 402 | 185 | 3 | 91 | 492 | 1 | 396 | 8.82e-147 | 426 |
| MS.gene29940.t1 | AT2G44550 | 47.119 | 486 | 240 | 10 | 10 | 489 | 14 | 488 | 2.30e-138 | 408 |
| MS.gene29940.t1 | AT3G43860 | 46.352 | 466 | 233 | 8 | 30 | 492 | 34 | 485 | 3.98e-136 | 402 |
| MS.gene29940.t1 | AT3G43860 | 46.352 | 466 | 233 | 8 | 30 | 492 | 34 | 485 | 3.98e-136 | 402 |
| MS.gene29940.t1 | AT2G44540 | 46.778 | 481 | 241 | 9 | 14 | 488 | 17 | 488 | 1.59e-135 | 400 |
| MS.gene29940.t1 | AT1G48930 | 48.291 | 468 | 229 | 8 | 29 | 488 | 29 | 491 | 6.41e-134 | 401 |
| MS.gene29940.t1 | AT2G44570 | 47.551 | 490 | 234 | 13 | 11 | 488 | 11 | 489 | 2.34e-133 | 395 |
| MS.gene29940.t1 | AT2G44560 | 46.939 | 490 | 243 | 10 | 7 | 488 | 8 | 488 | 3.22e-130 | 387 |
| MS.gene29940.t1 | AT1G19940 | 42.333 | 463 | 250 | 8 | 30 | 485 | 48 | 500 | 9.87e-118 | 356 |
| MS.gene29940.t1 | AT1G19940 | 42.333 | 463 | 250 | 8 | 30 | 485 | 48 | 500 | 9.87e-118 | 356 |
| MS.gene29940.t1 | AT1G22880 | 55.108 | 323 | 140 | 2 | 12 | 334 | 6 | 323 | 1.82e-114 | 341 |
| MS.gene29940.t1 | AT1G75680 | 43.413 | 463 | 245 | 9 | 26 | 481 | 53 | 505 | 2.12e-113 | 345 |
| MS.gene29940.t1 | AT4G38990 | 50.964 | 363 | 151 | 5 | 15 | 376 | 9 | 345 | 3.00e-112 | 336 |
| MS.gene29940.t1 | AT2G44570 | 45.161 | 403 | 200 | 11 | 11 | 402 | 11 | 403 | 2.61e-94 | 292 |
| MS.gene29940.t1 | AT1G19940 | 40.164 | 366 | 207 | 6 | 30 | 388 | 48 | 408 | 1.90e-82 | 262 |
| MS.gene29940.t1 | AT5G49720 | 37.524 | 517 | 270 | 17 | 16 | 493 | 87 | 589 | 5.85e-82 | 266 |
| MS.gene29940.t1 | AT4G24260 | 38.632 | 497 | 257 | 18 | 30 | 493 | 108 | 589 | 3.16e-79 | 259 |
| MS.gene29940.t1 | AT1G65610 | 35.659 | 516 | 283 | 18 | 12 | 492 | 91 | 592 | 2.41e-78 | 257 |
| MS.gene29940.t1 | AT4G24260 | 37.084 | 391 | 203 | 16 | 30 | 387 | 108 | 488 | 1.82e-49 | 177 |
| MS.gene29940.t1 | AT4G24260 | 39.185 | 319 | 160 | 12 | 30 | 320 | 108 | 420 | 2.97e-46 | 167 |
| MS.gene29940.t1 | AT3G42153 | 41.667 | 96 | 48 | 3 | 241 | 332 | 16 | 107 | 1.30e-13 | 67.8 |
Find 0 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTTAATTTAATTAAT+TGG | + | 57577:4335-4354 | MS.gene29940:intron | 0.0% |
| !! | AAATTAAATGAAACTAATTA+AGG | - | 57577:5737-5756 | None:intergenic | 10.0% |
| !! | AATTAAATGAAACTAATTAA+GGG | - | 57577:5736-5755 | None:intergenic | 10.0% |
| !!! | TAATATTCATATTTTATTGA+TGG | - | 57577:6386-6405 | None:intergenic | 10.0% |
| !!! | TTTAGTTTATTTAATATAAC+CGG | - | 57577:5129-5148 | None:intergenic | 10.0% |
| !! | AAAAGAAAAAACATTAATGA+TGG | - | 57577:6672-6691 | None:intergenic | 15.0% |
| !! | AATCTCATAAATAAATTCAA+TGG | - | 57577:5569-5588 | None:intergenic | 15.0% |
| !! | ATTAAATGAAACTAATTAAG+GGG | - | 57577:5735-5754 | None:intergenic | 15.0% |
| !! | TAAAAAAATGAAGAAAAGAA+AGG | - | 57577:3564-3583 | None:intergenic | 15.0% |
| !! | TTATTTAAATGCTATAATCA+CGG | - | 57577:6603-6622 | None:intergenic | 15.0% |
| !!! | CATTTAATTTTTTTTAGTTC+TGG | + | 57577:5747-5766 | MS.gene29940:intron | 15.0% |
| !!! | TTAATTTGACTTTATCTAAT+TGG | + | 57577:5223-5242 | MS.gene29940:intron | 15.0% |
| !! | AAAAAGTGAAATTAAATTCC+CGG | - | 57577:3738-3757 | None:intergenic | 20.0% |
| !! | ATGATTAATGTATGCATATT+GGG | - | 57577:4915-4934 | None:intergenic | 20.0% |
| !! | CTCAAAAGTCAAAAATAAAT+GGG | - | 57577:6568-6587 | None:intergenic | 20.0% |
| !! | GCTTGAATAATAAACAAAAA+CGG | - | 57577:5495-5514 | None:intergenic | 20.0% |
| !! | TATGATTAATGTATGCATAT+TGG | - | 57577:4916-4935 | None:intergenic | 20.0% |
| !! | TCTCAAAAGTCAAAAATAAA+TGG | - | 57577:6569-6588 | None:intergenic | 20.0% |
| !! | TTAAAAAAAAGTTACCACAA+TGG | - | 57577:6114-6133 | None:intergenic | 20.0% |
| !!! | AATATTATTTTATCTTGTGC+AGG | + | 57577:6399-6418 | MS.gene29940:intron | 20.0% |
| !!! | AATTTGTCTTTAAAACTTGT+AGG | + | 57577:5607-5626 | MS.gene29940:intron | 20.0% |
| !!! | ATCTAATCAAGTTTAAGATA+AGG | - | 57577:5081-5100 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTAGTTCTGGAAA+TGG | + | 57577:5753-5772 | MS.gene29940:intron | 20.0% |
| !!! | CAATTTTCAACAACTTTTTA+GGG | - | 57577:4206-4225 | None:intergenic | 20.0% |
| !!! | CTAAAAAAAGCAATTTTGTT+TGG | + | 57577:3618-3637 | MS.gene29940:intron | 20.0% |
| !!! | TAAAATTTTCCGTTAAGATA+TGG | + | 57577:3832-3851 | MS.gene29940:intron | 20.0% |
| !!! | TAATGTTTTTTCTTTTTGCA+AGG | + | 57577:6676-6695 | MS.gene29940:intron | 20.0% |
| !!! | TTATTTTTGACTTTTGAGAA+AGG | + | 57577:6570-6589 | MS.gene29940:intron | 20.0% |
| !!! | TTCATTTTTAAGTTTCATGT+GGG | + | 57577:5467-5486 | MS.gene29940:intron | 20.0% |
| !!! | TTGTTATTGTCCAATAATAA+TGG | + | 57577:4166-4185 | MS.gene29940:intron | 20.0% |
| !!! | TTTCATTTTTAAGTTTCATG+TGG | + | 57577:5466-5485 | MS.gene29940:intron | 20.0% |
| !!! | TTTTTTATCTTATATTGCAC+AGG | - | 57577:6362-6381 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTGTTATGAATCA+CGG | + | 57577:3778-3797 | MS.gene29940:intron | 20.0% |
| ! | AAAAACATTAATGATGGCTT+AGG | - | 57577:6666-6685 | None:intergenic | 25.0% |
| ! | ATAACAATAGAGAGAGAAAA+AGG | - | 57577:4153-4172 | None:intergenic | 25.0% |
| ! | ATGAGATTGATTGATATCAA+GGG | + | 57577:5581-5600 | MS.gene29940:intron | 25.0% |
| ! | ATTAAAAAACAGAGCAATGT+AGG | - | 57577:3053-3072 | None:intergenic | 25.0% |
| ! | ATTAATTGGAAAATCACTTG+TGG | + | 57577:4349-4368 | MS.gene29940:intron | 25.0% |
| ! | CCTAAAAAGTTGTTGAAAAT+TGG | + | 57577:4204-4223 | MS.gene29940:intron | 25.0% |
| ! | GTAATACAGTAAGTATTAAG+AGG | - | 57577:4246-4265 | None:intergenic | 25.0% |
| ! | GTTAACAATGTAAAAAAGGT+GGG | + | 57577:6848-6867 | MS.gene29940:intron | 25.0% |
| ! | GTTGGTTAACAATGTAAAAA+AGG | + | 57577:6844-6863 | MS.gene29940:intron | 25.0% |
| ! | TATCTATCCAAAAAGTCATT+GGG | + | 57577:6260-6279 | MS.gene29940:intron | 25.0% |
| ! | TATGAGATTGATTGATATCA+AGG | + | 57577:5580-5599 | MS.gene29940:intron | 25.0% |
| ! | TCACAAAAGTTGTTGAAAAT+TGG | - | 57577:4085-4104 | None:intergenic | 25.0% |
| ! | TGAAATTGTGCAGAAAATAA+TGG | - | 57577:5819-5838 | None:intergenic | 25.0% |
| ! | TGATGTTGAAAACAAGAAAT+TGG | - | 57577:7069-7088 | None:intergenic | 25.0% |
| ! | TGTGGTGTGAAAATAATTAA+TGG | - | 57577:5003-5022 | None:intergenic | 25.0% |
| ! | TTATCTATCCAAAAAGTCAT+TGG | + | 57577:6259-6278 | MS.gene29940:intron | 25.0% |
| ! | TTATTGTCCAATAATAATGG+AGG | + | 57577:4169-4188 | MS.gene29940:intron | 25.0% |
| !! | ACTAAGTACTACAGTATTTT+AGG | + | 57577:4591-4610 | MS.gene29940:intron | 25.0% |
| !! | ATTATTTGTTACTATGTGTG+TGG | + | 57577:4682-4701 | MS.gene29940:intron | 25.0% |
| !! | ATTTGACTTTATCTAATTGG+TGG | + | 57577:5226-5245 | MS.gene29940:intron | 25.0% |
| !! | ATTTTCTCACCATATCTTAA+CGG | - | 57577:3844-3863 | None:intergenic | 25.0% |
| !! | CCAATTTTCAACAACTTTTT+AGG | - | 57577:4207-4226 | None:intergenic | 25.0% |
| !! | TTATTTGTTACTATGTGTGT+GGG | + | 57577:4683-4702 | MS.gene29940:intron | 25.0% |
| !! | TTTGACTTTATCTAATTGGT+GGG | + | 57577:5227-5246 | MS.gene29940:intron | 25.0% |
| !!! | ACCACTTTTTAAATTTACCA+CGG | - | 57577:3675-3694 | None:intergenic | 25.0% |
| !!! | ATTGATTTTGGAAGAGTAAT+GGG | + | 57577:3184-3203 | MS.gene29940:CDS | 25.0% |
| !!! | CTCTGTTTTTTAATTTGTTG+TGG | + | 57577:3059-3078 | MS.gene29940:intron | 25.0% |
| !!! | TCTCTAAGATTAGTAGTATT+TGG | + | 57577:4276-4295 | MS.gene29940:intron | 25.0% |
| AAAAGGAAGAGAGAGAATAA+AGG | - | 57577:4136-4155 | None:intergenic | 30.0% | |
| AAACTTGTAGGACTAGAATT+TGG | + | 57577:5619-5638 | MS.gene29940:intron | 30.0% | |
| AACTGTGCACAATACTAAAT+AGG | - | 57577:6747-6766 | None:intergenic | 30.0% | |
| AACTTGTAGGACTAGAATTT+GGG | + | 57577:5620-5639 | MS.gene29940:intron | 30.0% | |
| AATGAGGGAATATATATACC+TGG | - | 57577:6532-6551 | None:intergenic | 30.0% | |
| AATTGGAATAAGCTAGTAAC+AGG | - | 57577:6927-6946 | None:intergenic | 30.0% | |
| ACATACAAACACTCAATCTA+AGG | - | 57577:6707-6726 | None:intergenic | 30.0% | |
| ACATTGTTAACCAACAAAAG+AGG | - | 57577:6839-6858 | None:intergenic | 30.0% | |
| ACCGTGGTAAATTTAAAAAG+TGG | + | 57577:3671-3690 | MS.gene29940:intron | 30.0% | |
| ACGTGATATATACACAAAGT+TGG | + | 57577:7161-7180 | MS.gene29940:intron | 30.0% | |
| ACTAGGTTAACTACATTCTT+GGG | + | 57577:7247-7266 | MS.gene29940:intron | 30.0% | |
| ACTGTGCACAATACTAAATA+GGG | - | 57577:6746-6765 | None:intergenic | 30.0% | |
| AGAATACATTATTCGTAACG+AGG | + | 57577:4437-4456 | MS.gene29940:CDS | 30.0% | |
| AGGAATAATAGAGTCCTAAT+TGG | - | 57577:4881-4900 | None:intergenic | 30.0% | |
| ATATTGCACAGGTTAATAGT+AGG | - | 57577:6351-6370 | None:intergenic | 30.0% | |
| ATCCAAAGTTCCAATTATCA+CGG | - | 57577:5526-5545 | None:intergenic | 30.0% | |
| ATGAATGTACCTTAGAAATG+AGG | - | 57577:4530-4549 | None:intergenic | 30.0% | |
| ATGAGGGAATATATATACCT+GGG | - | 57577:6531-6550 | None:intergenic | 30.0% | |
| ATGTTTATGTGAGTACAGAT+TGG | + | 57577:5322-5341 | MS.gene29940:intron | 30.0% | |
| CAAAGAAAAGAATGCTCTTA+CGG | - | 57577:2911-2930 | None:intergenic | 30.0% | |
| CAAGAAATATGATGTTGATG+GGG | - | 57577:5886-5905 | None:intergenic | 30.0% | |
| CACAATTTCACTTTCTATCA+GGG | + | 57577:5829-5848 | MS.gene29940:intron | 30.0% | |
| CACAGTTATTATTGCATAGA+CGG | + | 57577:6760-6779 | MS.gene29940:intron | 30.0% | |
| CGTTTACATCACAGTAAAAT+GGG | - | 57577:3959-3978 | None:intergenic | 30.0% | |
| CTGCTTCAATGAAATTAACA+GGG | - | 57577:4567-4586 | None:intergenic | 30.0% | |
| GATTAATGTCCTCATTTCTA+AGG | + | 57577:4518-4537 | MS.gene29940:CDS | 30.0% | |
| GCAAGAAATATGATGTTGAT+GGG | - | 57577:5887-5906 | None:intergenic | 30.0% | |
| GGTTAACAATGTAAAAAAGG+TGG | + | 57577:6847-6866 | MS.gene29940:intron | 30.0% | |
| TAACATTTCCCTACAAGAAA+AGG | - | 57577:5912-5931 | None:intergenic | 30.0% | |
| TAATGTATGCATATTGGGAA+TGG | - | 57577:4910-4929 | None:intergenic | 30.0% | |
| TACTAGGTTAACTACATTCT+TGG | + | 57577:7246-7265 | MS.gene29940:intron | 30.0% | |
| TAGGACTCTATTATTCCTAT+TGG | + | 57577:4883-4902 | MS.gene29940:intron | 30.0% | |
| TCAACATCAGACAAAACTAA+CGG | + | 57577:7080-7099 | MS.gene29940:intron | 30.0% | |
| TCAAGATAGCAATGAGAAAA+GGG | + | 57577:5402-5421 | MS.gene29940:intron | 30.0% | |
| TGAGATTGATTGATATCAAG+GGG | + | 57577:5582-5601 | MS.gene29940:intron | 30.0% | |
| TGCAAGAAATATGATGTTGA+TGG | - | 57577:5888-5907 | None:intergenic | 30.0% | |
| TGTTCCAAATGTTTACGATA+TGG | - | 57577:5702-5721 | None:intergenic | 30.0% | |
| TTTATTTGTTCAACATTGCC+TGG | + | 57577:6478-6497 | MS.gene29940:CDS | 30.0% | |
| TTTCAATACCAATCACCAAA+CGG | - | 57577:5381-5400 | None:intergenic | 30.0% | |
| ! | AAGAAATATGATGTTGATGG+GGG | - | 57577:5885-5904 | None:intergenic | 30.0% |
| ! | AGAGGAAGTTTGAGTTATTT+AGG | - | 57577:6821-6840 | None:intergenic | 30.0% |
| ! | CCAATAATAATGGAGGAAAA+AGG | + | 57577:4176-4195 | MS.gene29940:intron | 30.0% |
| ! | CCATTTTACTGTGATGTAAA+CGG | + | 57577:3957-3976 | MS.gene29940:CDS | 30.0% |
| ! | CCTTTTTCCTCCATTATTAT+TGG | - | 57577:4179-4198 | None:intergenic | 30.0% |
| ! | TACAAAACCCAATGACTTTT+TGG | - | 57577:6270-6289 | None:intergenic | 30.0% |
| ! | TAGAAAAAGCTTTATCCGTT+TGG | + | 57577:5363-5382 | MS.gene29940:intron | 30.0% |
| ! | TATAACCGGTTTACTATAAG+CGG | - | 57577:5115-5134 | None:intergenic | 30.0% |
| !! | AAAAGTCATTGGGTTTTGTA+CGG | + | 57577:6270-6289 | MS.gene29940:intron | 30.0% |
| !! | ATTATTTTATCTTGTGCAGG+AGG | + | 57577:6402-6421 | MS.gene29940:intron | 30.0% |
| !! | GATTGATTTTGGAAGAGTAA+TGG | + | 57577:3183-3202 | MS.gene29940:CDS | 30.0% |
| !! | GTAGGAGTATTTAATACTTG+AGG | + | 57577:4043-4062 | MS.gene29940:intron | 30.0% |
| !! | TAATTTGTTGTGGTTGTTTC+AGG | + | 57577:3069-3088 | MS.gene29940:intron | 30.0% |
| !!! | AAGAGCATTCTTTTCTTTGA+AGG | + | 57577:2912-2931 | MS.gene29940:CDS | 30.0% |
| !!! | TTTTTAGTTCTGGAAATGGA+TGG | + | 57577:5757-5776 | MS.gene29940:intron | 30.0% |
| ACAATGGTGTGTTACAAGAA+AGG | - | 57577:6098-6117 | None:intergenic | 35.0% | |
| ACACCATTAATGAGTTTGGT+TGG | + | 57577:4478-4497 | MS.gene29940:CDS | 35.0% | |
| ACAGAACAATACCTCTTTGA+TGG | + | 57577:4011-4030 | MS.gene29940:intron | 35.0% | |
| ACTGAATAGTACCATCAAAG+AGG | - | 57577:4025-4044 | None:intergenic | 35.0% | |
| AGGGAACTTTATCACTAGAT+TGG | - | 57577:4820-4839 | None:intergenic | 35.0% | |
| ATATATCAATGCACCACTTG+TGG | + | 57577:7524-7543 | MS.gene29940:CDS | 35.0% | |
| ATGCATGGTACAACAAGAAA+GGG | + | 57577:5298-5317 | MS.gene29940:intron | 35.0% | |
| CAAGATAGCAATGAGAAAAG+GGG | + | 57577:5403-5422 | MS.gene29940:intron | 35.0% | |
| CAATGGTGTGTTACAAGAAA+GGG | - | 57577:6097-6116 | None:intergenic | 35.0% | |
| CACCATTAATGAGTTTGGTT+GGG | + | 57577:4479-4498 | MS.gene29940:CDS | 35.0% | |
| CCAAATGTTTACGATATGGA+GGG | - | 57577:5698-5717 | None:intergenic | 35.0% | |
| CCGTTTACATCACAGTAAAA+TGG | - | 57577:3960-3979 | None:intergenic | 35.0% | |
| CTAGGTTAACTACATTCTTG+GGG | + | 57577:7248-7267 | MS.gene29940:intron | 35.0% | |
| CTTCAATGAAATTAACAGGG+AGG | - | 57577:4564-4583 | None:intergenic | 35.0% | |
| GCACAATTTCACTTTCTATC+AGG | + | 57577:5828-5847 | MS.gene29940:intron | 35.0% | |
| GCTGCTTCAATGAAATTAAC+AGG | - | 57577:4568-4587 | None:intergenic | 35.0% | |
| GCTTTAATCTGAACCAAACT+GGG | + | 57577:5657-5676 | MS.gene29940:intron | 35.0% | |
| GGCAAAACAAAACACAATGA+GGG | - | 57577:6547-6566 | None:intergenic | 35.0% | |
| GGTCCCAAAGAATTAATCAA+CGG | - | 57577:7048-7067 | None:intergenic | 35.0% | |
| GTAATCCGCTTATAGTAAAC+CGG | + | 57577:5107-5126 | MS.gene29940:intron | 35.0% | |
| GTCAAGATAGCAATGAGAAA+AGG | + | 57577:5401-5420 | MS.gene29940:intron | 35.0% | |
| GTCCCAAAGAATTAATCAAC+GGG | - | 57577:7047-7066 | None:intergenic | 35.0% | |
| TATATCAATGCACCACTTGT+GGG | + | 57577:7525-7544 | MS.gene29940:CDS | 35.0% | |
| TATGCATGGTACAACAAGAA+AGG | + | 57577:5297-5316 | MS.gene29940:intron | 35.0% | |
| TATTGCATAGACGGCAATAT+TGG | + | 57577:6769-6788 | MS.gene29940:intron | 35.0% | |
| TCCAAATGTTTACGATATGG+AGG | - | 57577:5699-5718 | None:intergenic | 35.0% | |
| TCCCAAAGAATTAATCAACG+GGG | - | 57577:7046-7065 | None:intergenic | 35.0% | |
| TGAGGGAATATATATACCTG+GGG | - | 57577:6530-6549 | None:intergenic | 35.0% | |
| TTAAAGGCGACGTCAAATAT+AGG | + | 57577:3259-3278 | MS.gene29940:CDS | 35.0% | |
| TTATGAATCACGGAGTTAGT+TGG | + | 57577:3788-3807 | MS.gene29940:intron | 35.0% | |
| TTCCGTGATAATTGGAACTT+TGG | + | 57577:5521-5540 | MS.gene29940:intron | 35.0% | |
| TTGTGCAGAAAATAATGGTG+AGG | - | 57577:5814-5833 | None:intergenic | 35.0% | |
| TTTACCATAACCAACCATGT+AGG | - | 57577:7292-7311 | None:intergenic | 35.0% | |
| TTTCTTGTAACACACCATTG+TGG | + | 57577:6097-6116 | MS.gene29940:intron | 35.0% | |
| ! | ACTCAAACTTCCTCTTTTGT+TGG | + | 57577:6826-6845 | MS.gene29940:intron | 35.0% |
| ! | AGAAGCAATTTAGAGTAAGC+AGG | - | 57577:3469-3488 | None:intergenic | 35.0% |
| ! | CGTTGCTTTCATTTACTACT+AGG | + | 57577:7230-7249 | MS.gene29940:intron | 35.0% |
| ! | CTTTGATGGTACTATTCAGT+AGG | + | 57577:4025-4044 | MS.gene29940:intron | 35.0% |
| ! | GGAAAATCACTTGTGGTTTT+AGG | + | 57577:4356-4375 | MS.gene29940:intron | 35.0% |
| ! | TCCCCGTTGATTAATTCTTT+GGG | + | 57577:7042-7061 | MS.gene29940:intron | 35.0% |
| ! | TCTTGCATCCTTTTCTTGTA+GGG | + | 57577:5901-5920 | MS.gene29940:intron | 35.0% |
| ! | TTCCCCGTTGATTAATTCTT+TGG | + | 57577:7041-7060 | MS.gene29940:intron | 35.0% |
| ! | TTCTTGCATCCTTTTCTTGT+AGG | + | 57577:5900-5919 | MS.gene29940:intron | 35.0% |
| !! | AAAGTCATTGGGTTTTGTAC+GGG | + | 57577:6271-6290 | MS.gene29940:intron | 35.0% |
| !! | TTAAGTGAAGTGCTCTGTTT+TGG | - | 57577:4975-4994 | None:intergenic | 35.0% |
| !!! | GTTTTAGGATGAGTTGCTTT+GGG | + | 57577:4371-4390 | MS.gene29940:intron | 35.0% |
| AAACCCTAACCCAAATGTCT+TGG | + | 57577:7416-7435 | MS.gene29940:CDS | 40.0% | |
| ACAAACAGACCACGTGATAA+GGG | - | 57577:4839-4858 | None:intergenic | 40.0% | |
| AGAGAGAAGATTGCATGGAA+TGG | - | 57577:3525-3544 | None:intergenic | 40.0% | |
| ATGTGAAATGAGGCTTACTC+CGG | - | 57577:3015-3034 | None:intergenic | 40.0% | |
| ATTCTGTTAGGTCAGAGACA+CGG | + | 57577:6294-6313 | MS.gene29940:intron | 40.0% | |
| ATTGGCATGGCTTAGGTAAT+TGG | - | 57577:6944-6963 | None:intergenic | 40.0% | |
| CAAGAAAGGGTCATGTTAAC+CGG | - | 57577:6084-6103 | None:intergenic | 40.0% | |
| CAGAAGAAACACAATGCATG+TGG | - | 57577:5021-5040 | None:intergenic | 40.0% | |
| CATATTGGGAATGGACCAAT+AGG | - | 57577:4901-4920 | None:intergenic | 40.0% | |
| CCCTCCATATCGTAAACATT+TGG | + | 57577:5695-5714 | MS.gene29940:intron | 40.0% | |
| CGCTTTAATCTGAACCAAAC+TGG | + | 57577:5656-5675 | MS.gene29940:intron | 40.0% | |
| CGTAACGTATCCATATCTTC+CGG | - | 57577:3346-3365 | None:intergenic | 40.0% | |
| CTGGTTAAGGAAGCTAAAAG+TGG | - | 57577:6048-6067 | None:intergenic | 40.0% | |
| CTGTGATGTAAACGGTTATC+AGG | + | 57577:3965-3984 | MS.gene29940:CDS | 40.0% | |
| GAATCTATGACACGATGAAG+AGG | + | 57577:5257-5276 | MS.gene29940:intron | 40.0% | |
| GAGAGAAGATTGCATGGAAT+GGG | - | 57577:3524-3543 | None:intergenic | 40.0% | |
| GATAAAGTTCCCTTATCACG+TGG | + | 57577:4827-4846 | MS.gene29940:intron | 40.0% | |
| GCAAGACATTCCGTGATAAT+TGG | + | 57577:5513-5532 | MS.gene29940:intron | 40.0% | |
| GCACAGTTTACAAGATCGAT+GGG | + | 57577:3365-3384 | MS.gene29940:CDS | 40.0% | |
| GGAATAAGCTAGTAACAGGA+AGG | - | 57577:6923-6942 | None:intergenic | 40.0% | |
| GGGCAAAACAAAACACAATG+AGG | - | 57577:6548-6567 | None:intergenic | 40.0% | |
| GGTGACACCATTAATGAGTT+TGG | + | 57577:4474-4493 | MS.gene29940:CDS | 40.0% | |
| GTCCCAACCAAACTCATTAA+TGG | - | 57577:4484-4503 | None:intergenic | 40.0% | |
| GTGATGCACTTTCTCCAATT+AGG | + | 57577:4864-4883 | MS.gene29940:intron | 40.0% | |
| TCAAGTCGGTGATCCTTTAT+CGG | + | 57577:3300-3319 | MS.gene29940:CDS | 40.0% | |
| TTAATCTGAACCAAACTGGG+TGG | + | 57577:5660-5679 | MS.gene29940:intron | 40.0% | |
| TTAATGATGGCTTAGGCCTT+TGG | - | 57577:6659-6678 | None:intergenic | 40.0% | |
| TTACAACGACGATGTTAGCT+TGG | + | 57577:3155-3174 | MS.gene29940:CDS | 40.0% | |
| TTACCTAAGCCATGCCAATA+AGG | + | 57577:6945-6964 | MS.gene29940:CDS | 40.0% | |
| TTGTAGGACTAGAATTTGGG+TGG | + | 57577:5623-5642 | MS.gene29940:intron | 40.0% | |
| TTTATCGGACCACAACTGTT+GGG | + | 57577:3315-3334 | MS.gene29940:CDS | 40.0% | |
| ! | AAAAGGTGGGCTTATCTTCA+AGG | + | 57577:6861-6880 | MS.gene29940:intron | 40.0% |
| ! | AAGACATTTGGGTTAGGGTT+TGG | - | 57577:7417-7436 | None:intergenic | 40.0% |
| ! | ACAGAGCACTATGTGAAATG+AGG | - | 57577:3025-3044 | None:intergenic | 40.0% |
| ! | AGACATTTGGGTTAGGGTTT+GGG | - | 57577:7416-7435 | None:intergenic | 40.0% |
| ! | AGCTTTATCCGTTTGGTGAT+TGG | + | 57577:5370-5389 | MS.gene29940:intron | 40.0% |
| ! | ATGTCCTACATGGTTGGTTA+TGG | + | 57577:7285-7304 | MS.gene29940:CDS | 40.0% |
| ! | CAACCAAGACATTTGGGTTA+GGG | - | 57577:7422-7441 | None:intergenic | 40.0% |
| ! | GGTGCATTGATATATGTCGT+GGG | - | 57577:7519-7538 | None:intergenic | 40.0% |
| ! | GTTTTGTACGGGATTCTGTT+AGG | + | 57577:6282-6301 | MS.gene29940:intron | 40.0% |
| ! | TAAATTCCCGGTAAAGTGCT+TGG | - | 57577:3726-3745 | None:intergenic | 40.0% |
| ! | TATCTAATTGGTGGGTCACA+TGG | + | 57577:5235-5254 | MS.gene29940:intron | 40.0% |
| ! | TGGTGCATTGATATATGTCG+TGG | - | 57577:7520-7539 | None:intergenic | 40.0% |
| ! | TGTTGATGGGGGCTTAAAAA+AGG | - | 57577:5874-5893 | None:intergenic | 40.0% |
| ! | TTTGTTGTGGTTGTTTCAGG+TGG | + | 57577:3072-3091 | MS.gene29940:intron | 40.0% |
| !! | AACGAATCTGTAGTGTTGGT+AGG | - | 57577:7462-7481 | None:intergenic | 40.0% |
| !! | AAGGCTTTTGAGTAATGCAG+GGG | - | 57577:6998-7017 | None:intergenic | 40.0% |
| !! | CAAGGCTTTTGAGTAATGCA+GGG | - | 57577:6999-7018 | None:intergenic | 40.0% |
| !! | GCTTGGAGTGTGATTGATTT+TGG | + | 57577:3172-3191 | MS.gene29940:CDS | 40.0% |
| !!! | CTGTTTTGGTGTTTTGCTTG+TGG | - | 57577:4961-4980 | None:intergenic | 40.0% |
| !!! | GGGAACGGACTATCTTTTAA+AGG | + | 57577:3243-3262 | MS.gene29940:CDS | 40.0% |
| !!! | GGTTTTAGGATGAGTTGCTT+TGG | + | 57577:4370-4389 | MS.gene29940:intron | 40.0% |
| AACGGGGAATGCAAGACAAT+AGG | - | 57577:4752-4771 | None:intergenic | 45.0% | |
| ACAGCTCCAACCAAGACATT+TGG | - | 57577:7429-7448 | None:intergenic | 45.0% | |
| ACCACATGGCACAACCTTAT+TGG | - | 57577:6962-6981 | None:intergenic | 45.0% | |
| ACCATGTAGGACATTCCCAA+CGG | - | 57577:7279-7298 | None:intergenic | 45.0% | |
| ACTTGTGCGTGAGAAAATCC+AGG | - | 57577:6499-6518 | None:intergenic | 45.0% | |
| AGCTAGTAACAGGAAGGACA+AGG | - | 57577:6917-6936 | None:intergenic | 45.0% | |
| AGGGAACGAATCTGTAGTGT+TGG | - | 57577:7466-7485 | None:intergenic | 45.0% | |
| AGGGAATTGAGCTTCCTCTA+TGG | - | 57577:7335-7354 | None:intergenic | 45.0% | |
| AGTTACAGCAGTGACAGCAA+GGG | - | 57577:6146-6165 | None:intergenic | 45.0% | |
| ATCACGTGATCTGAACACGA+TGG | - | 57577:3446-3465 | None:intergenic | 45.0% | |
| ATCCAGCTTTGCATCCAATG+TGG | - | 57577:7377-7396 | None:intergenic | 45.0% | |
| ATCGTCGTTGTAAACGCCAT+CGG | - | 57577:3148-3167 | None:intergenic | 45.0% | |
| ATGGCACAACCTTATTGGCA+TGG | - | 57577:6957-6976 | None:intergenic | 45.0% | |
| ATTCTTGGGGATAACCCGTT+GGG | + | 57577:7261-7280 | MS.gene29940:CDS | 45.0% | |
| ATTGTCTTGCATTCCCCGTT+AGG | + | 57577:4752-4771 | MS.gene29940:intron | 45.0% | |
| CAACAGTTGTGGTCCGATAA+AGG | - | 57577:3316-3335 | None:intergenic | 45.0% | |
| CAACCTTATTGGCATGGCTT+AGG | - | 57577:6951-6970 | None:intergenic | 45.0% | |
| CACAAACAGACCACGTGATA+AGG | - | 57577:4840-4859 | None:intergenic | 45.0% | |
| CACATGCATAGTGCAGTACT+GGG | - | 57577:5789-5808 | None:intergenic | 45.0% | |
| CAGCTCCAACCAAGACATTT+GGG | - | 57577:7428-7447 | None:intergenic | 45.0% | |
| CCTAACCCAAATGTCTTGGT+TGG | + | 57577:7420-7439 | MS.gene29940:CDS | 45.0% | |
| CGCACAGTTTACAAGATCGA+TGG | + | 57577:3364-3383 | MS.gene29940:CDS | 45.0% | |
| CTCTATGGTGTATCCTCTGT+GGG | - | 57577:7320-7339 | None:intergenic | 45.0% | |
| CTTTATCGGACCACAACTGT+TGG | + | 57577:3314-3333 | MS.gene29940:CDS | 45.0% | |
| GAGAGAGAGAGAAGATTGCA+TGG | - | 57577:3530-3549 | None:intergenic | 45.0% | |
| GATAGAAAGGCCTGGAATCA+GGG | - | 57577:7485-7504 | None:intergenic | 45.0% | |
| GATATGGAGGGCAAAGAGTT+TGG | - | 57577:5686-5705 | None:intergenic | 45.0% | |
| GCACAAGTTCAATATTCCCC+AGG | + | 57577:6511-6530 | MS.gene29940:CDS | 45.0% | |
| GCGACGTCAAATATAGGTTC+CGG | + | 57577:3265-3284 | MS.gene29940:CDS | 45.0% | |
| GGTGAGAAAATGACCGTTGA+TGG | + | 57577:3853-3872 | MS.gene29940:intron | 45.0% | |
| GTAACGCGTTGAAATCAGTG+AGG | + | 57577:3218-3237 | MS.gene29940:CDS | 45.0% | |
| GTAGAAAACTAGCGAAACCG+TGG | + | 57577:3655-3674 | MS.gene29940:intron | 45.0% | |
| TCCAGCTTTGCATCCAATGT+GGG | - | 57577:7376-7395 | None:intergenic | 45.0% | |
| TGATAGAAAGGCCTGGAATC+AGG | - | 57577:7486-7505 | None:intergenic | 45.0% | |
| TGTGCAACTGTGCATATGCA+TGG | + | 57577:5283-5302 | MS.gene29940:intron | 45.0% | |
| TTCTGTTAGGTCAGAGACAC+GGG | + | 57577:6295-6314 | MS.gene29940:intron | 45.0% | |
| TTGGGAATGTCCTACATGGT+TGG | + | 57577:7279-7298 | MS.gene29940:CDS | 45.0% | |
| ! | CATAAAGTTCGGGTTTCCGA+TGG | + | 57577:3129-3148 | MS.gene29940:CDS | 45.0% |
| ! | CCAACCAAGACATTTGGGTT+AGG | - | 57577:7423-7442 | None:intergenic | 45.0% |
| ! | GAGAAAATGACCGTTGATGG+TGG | + | 57577:3856-3875 | MS.gene29940:intron | 45.0% |
| ! | TTCTTTGAAGGACAACGCTC+TGG | + | 57577:2924-2943 | MS.gene29940:CDS | 45.0% |
| ! | TTGTTTCAGGTGGACTTGAC+CGG | + | 57577:3082-3101 | MS.gene29940:intron | 45.0% |
| !! | CTTGTGCAGGAGGTGTTAAT+GGG | + | 57577:6412-6431 | MS.gene29940:intron | 45.0% |
| !! | GCAAGGCTTTTGAGTAATGC+AGG | - | 57577:7000-7019 | None:intergenic | 45.0% |
| !! | TCTTGTGCAGGAGGTGTTAA+TGG | + | 57577:6411-6430 | MS.gene29940:intron | 45.0% |
| !!! | AACGAGGTTGTTTTGAGAGC+TGG | + | 57577:4453-4472 | MS.gene29940:CDS | 45.0% |
| !! | TATTAAAAAAAAATTAAATC+AGG | + | 57577:5170-5189 | MS.gene29940:intron | 5.0% |
| AAATGTTAACCAGTGCCCCC+GGG | + | 57577:5924-5943 | MS.gene29940:intron | 50.0% | |
| AAGAGTTTGGCCACCCAGTT+TGG | - | 57577:5673-5692 | None:intergenic | 50.0% | |
| AATGAAGCTGACCTGGCGTT+TGG | - | 57577:7022-7041 | None:intergenic | 50.0% | |
| ACCCATGTGTCCATGACCAA+AGG | + | 57577:6640-6659 | MS.gene29940:intron | 50.0% | |
| ACGCGTTGAAATCAGTGAGG+TGG | + | 57577:3221-3240 | MS.gene29940:CDS | 50.0% | |
| AGACTGCTGATAGAAAGGCC+TGG | - | 57577:7493-7512 | None:intergenic | 50.0% | |
| AGCATCGTGATAGTCGTGAC+CGG | - | 57577:2886-2905 | None:intergenic | 50.0% | |
| AGTAAAATGGGCACACTGCC+CGG | - | 57577:3947-3966 | None:intergenic | 50.0% | |
| ATACAGTAACAGCCTACGCC+GGG | + | 57577:3926-3945 | MS.gene29940:CDS | 50.0% | |
| ATGAAAGCGACGCACCGTAA+CGG | - | 57577:3500-3519 | None:intergenic | 50.0% | |
| ATGGCTTAGGCCTTTGGTCA+TGG | - | 57577:6653-6672 | None:intergenic | 50.0% | |
| ATGGTAAACGCTACCCACAG+AGG | + | 57577:7304-7323 | MS.gene29940:CDS | 50.0% | |
| CACACACTCACCACCATCAA+CGG | - | 57577:3869-3888 | None:intergenic | 50.0% | |
| CAGATTCGTTCCCTGATTCC+AGG | + | 57577:7472-7491 | MS.gene29940:CDS | 50.0% | |
| CAGTTACAGCAGTGACAGCA+AGG | - | 57577:6147-6166 | None:intergenic | 50.0% | |
| CATACAGTAACAGCCTACGC+CGG | + | 57577:3925-3944 | MS.gene29940:CDS | 50.0% | |
| CATTCTTGGGGATAACCCGT+TGG | + | 57577:7260-7279 | MS.gene29940:CDS | 50.0% | |
| CCACAGAGGATACACCATAG+AGG | + | 57577:7318-7337 | MS.gene29940:CDS | 50.0% | |
| CCATGTAGGACATTCCCAAC+GGG | - | 57577:7278-7297 | None:intergenic | 50.0% | |
| CCCATTCCAAGCACTTTACC+GGG | + | 57577:3717-3736 | MS.gene29940:intron | 50.0% | |
| CCCGAACTTTATGTTGTCGC+CGG | - | 57577:3122-3141 | None:intergenic | 50.0% | |
| CCGGCGACAACATAAAGTTC+GGG | + | 57577:3119-3138 | MS.gene29940:CDS | 50.0% | |
| CCTCTATGGTGTATCCTCTG+TGG | - | 57577:7321-7340 | None:intergenic | 50.0% | |
| CGATTGTTCGGAGCAAAAGG+AGG | - | 57577:2860-2879 | None:intergenic | 50.0% | |
| CGCGTTGAAATCAGTGAGGT+GGG | + | 57577:3222-3241 | MS.gene29940:CDS | 50.0% | |
| CGTCGTGAATTCCAGAGTCA+CGG | - | 57577:2983-3002 | None:intergenic | 50.0% | |
| GAAATCAGTGAGGTGGGGAA+CGG | + | 57577:3228-3247 | MS.gene29940:CDS | 50.0% | |
| GAAATGTTAACCAGTGCCCC+CGG | + | 57577:5923-5942 | MS.gene29940:intron | 50.0% | |
| GACTTGAACAAACACCACGC+CGG | - | 57577:3287-3306 | None:intergenic | 50.0% | |
| GCACATGCATAGTGCAGTAC+TGG | - | 57577:5790-5809 | None:intergenic | 50.0% | |
| GCCAATAAGGTTGTGCCATG+TGG | + | 57577:6958-6977 | MS.gene29940:CDS | 50.0% | |
| GCCCATTCCAAGCACTTTAC+CGG | + | 57577:3716-3735 | MS.gene29940:intron | 50.0% | |
| GCCGGCGACAACATAAAGTT+CGG | + | 57577:3118-3137 | MS.gene29940:CDS | 50.0% | |
| GCCTTTGGTCATGGACACAT+GGG | - | 57577:6644-6663 | None:intergenic | 50.0% | |
| GCGTTGAAATCAGTGAGGTG+GGG | + | 57577:3223-3242 | MS.gene29940:CDS | 50.0% | |
| GGCGTGGTGTTTGTTCAAGT+CGG | + | 57577:3286-3305 | MS.gene29940:CDS | 50.0% | |
| GGCTCAGACTGCTGATAGAA+AGG | - | 57577:7498-7517 | None:intergenic | 50.0% | |
| GTCAAATATAGGTTCCGGCG+TGG | + | 57577:3270-3289 | MS.gene29940:CDS | 50.0% | |
| GTCTTGGTTGGAGCTGTAGT+TGG | + | 57577:7432-7451 | MS.gene29940:CDS | 50.0% | |
| GTTGGGACAACAAGCATGCT+GGG | + | 57577:4496-4515 | MS.gene29940:CDS | 50.0% | |
| TAACTCCTTAACCAGTGCCC+CGG | - | 57577:5945-5964 | None:intergenic | 50.0% | |
| TCGGAGCAAAAGGAGGAGTA+TGG | - | 57577:2853-2872 | None:intergenic | 50.0% | |
| TCTGAACACGATGGAAGCAG+CGG | - | 57577:3437-3456 | None:intergenic | 50.0% | |
| TCTGTATAGACGTCTACGCG+AGG | - | 57577:4418-4437 | None:intergenic | 50.0% | |
| TGAAATGAGGCTTACTCCGG+CGG | - | 57577:3012-3031 | None:intergenic | 50.0% | |
| TGGTTGGAGCTGTAGTTGGT+GGG | + | 57577:7436-7455 | MS.gene29940:CDS | 50.0% | |
| TTCAACGCGTTACCTAGCTC+AGG | - | 57577:3211-3230 | None:intergenic | 50.0% | |
| TTGGGAGAGACCGGAAGATA+TGG | + | 57577:3333-3352 | MS.gene29940:CDS | 50.0% | |
| TTGGTTGGAGCTGTAGTTGG+TGG | + | 57577:7435-7454 | MS.gene29940:CDS | 50.0% | |
| ! | AGAGTAATGGGACCTGAGCT+AGG | + | 57577:3196-3215 | MS.gene29940:CDS | 50.0% |
| ! | ATGCATAGTGCAGTACTGGG+TGG | - | 57577:5786-5805 | None:intergenic | 50.0% |
| ! | CCCGGTAAAGTGCTTGGAAT+GGG | - | 57577:3720-3739 | None:intergenic | 50.0% |
| ! | GCTTCTCAATCGTGCCGTTA+CGG | + | 57577:3483-3502 | MS.gene29940:CDS | 50.0% |
| ! | TCCCGGTAAAGTGCTTGGAA+TGG | - | 57577:3721-3740 | None:intergenic | 50.0% |
| ! | TGCATAGTGCAGTACTGGGT+GGG | - | 57577:5785-5804 | None:intergenic | 50.0% |
| !! | CGTGACTCTGGAATTCACGA+CGG | + | 57577:2981-3000 | MS.gene29940:CDS | 50.0% |
| !! | GAGTTTGCTGACAGACATCG+TGG | + | 57577:3900-3919 | MS.gene29940:CDS | 50.0% |
| !! | GCTTTTGAGTAATGCAGGGG+TGG | - | 57577:6995-7014 | None:intergenic | 50.0% |
| AAAGCGAGCAGACCCACAAG+TGG | - | 57577:7540-7559 | None:intergenic | 55.0% | |
| AACTCCTTAACCAGTGCCCC+GGG | - | 57577:5944-5963 | None:intergenic | 55.0% | |
| AAGATCGATGGGTCCCATCC+AGG | + | 57577:3376-3395 | MS.gene29940:CDS | 55.0% | |
| AATGTTAACCAGTGCCCCCG+GGG | + | 57577:5925-5944 | MS.gene29940:intron | 55.0% | |
| ACGGGGAAATGAAGCTGACC+TGG | - | 57577:7029-7048 | None:intergenic | 55.0% | |
| AGCTTCCTTAACCAGTGCCC+CGG | + | 57577:6053-6072 | MS.gene29940:intron | 55.0% | |
| AGTGGAGACGCTGATCAGAC+GGG | - | 57577:2956-2975 | None:intergenic | 55.0% | |
| ATCGTGATAGTCGTGACCGG+CGG | - | 57577:2883-2902 | None:intergenic | 55.0% | |
| CAAAAGCCTTGCCAAACGCC+AGG | + | 57577:7008-7027 | MS.gene29940:CDS | 55.0% | |
| CAGCAGTGACAGCAAGGGAA+AGG | - | 57577:6141-6160 | None:intergenic | 55.0% | |
| CAGTGGAGACGCTGATCAGA+CGG | - | 57577:2957-2976 | None:intergenic | 55.0% | |
| CCACAACTGTTGGGAGAGAC+CGG | + | 57577:3324-3343 | MS.gene29940:CDS | 55.0% | |
| CCCGTTGGGAATGTCCTACA+TGG | + | 57577:7275-7294 | MS.gene29940:CDS | 55.0% | |
| CGGCGATTGTTCGGAGCAAA+AGG | - | 57577:2863-2882 | None:intergenic | 55.0% | |
| GCATTCCCCGTTAGGCATGT+GGG | + | 57577:4760-4779 | MS.gene29940:intron | 55.0% | |
| GCCCACATTGGATGCAAAGC+TGG | + | 57577:7372-7391 | MS.gene29940:CDS | 55.0% | |
| GCTTTGCATCCAATGTGGGC+TGG | - | 57577:7372-7391 | None:intergenic | 55.0% | |
| GGCCTTTGGTCATGGACACA+TGG | - | 57577:6645-6664 | None:intergenic | 55.0% | |
| GGGCTTATCTTCAAGGCTGG+TGG | + | 57577:6868-6887 | MS.gene29940:CDS | 55.0% | |
| GGTTGGGACAACAAGCATGC+TGG | + | 57577:4495-4514 | MS.gene29940:CDS | 55.0% | |
| TATGGCGAGGACGCGAAATG+TGG | - | 57577:2835-2854 | None:intergenic | 55.0% | |
| TGCATTCCCCGTTAGGCATG+TGG | + | 57577:4759-4778 | MS.gene29940:intron | 55.0% | |
| ! | ATGGTGGTGAGTGTGTGTGC+AGG | + | 57577:3872-3891 | MS.gene29940:intron | 55.0% |
| ! | GCAAAAGGAGGAGTATGGCG+AGG | - | 57577:2848-2867 | None:intergenic | 55.0% |
| ! | GGTGGGCTTATCTTCAAGGC+TGG | + | 57577:6865-6884 | MS.gene29940:intron | 55.0% |
| ! | TTTCAGGTGGACTTGACCGG+AGG | + | 57577:3085-3104 | MS.gene29940:intron | 55.0% |
| !! | GCATCCAATGTGGGCTGGAT+GGG | - | 57577:7367-7386 | None:intergenic | 55.0% |
| !! | GCTGGATGGGCTGAAACTGA+GGG | - | 57577:7354-7373 | None:intergenic | 55.0% |
| !! | TGCATCCAATGTGGGCTGGA+TGG | - | 57577:7368-7387 | None:intergenic | 55.0% |
| AATGAGGCTTACTCCGGCGG+TGG | - | 57577:3009-3028 | None:intergenic | 60.0% | |
| ACCGGAGGTTACTACGACGC+CGG | + | 57577:3100-3119 | MS.gene29940:CDS | 60.0% | |
| ACTCCTTAACCAGTGCCCCG+GGG | - | 57577:5943-5962 | None:intergenic | 60.0% | |
| AGCTGACCTGGCGTTTGGCA+AGG | - | 57577:7017-7036 | None:intergenic | 60.0% | |
| CCGGTCTCTCCCAACAGTTG+TGG | - | 57577:3327-3346 | None:intergenic | 60.0% | |
| CGTCTGATCAGCGTCTCCAC+TGG | + | 57577:2955-2974 | MS.gene29940:CDS | 60.0% | |
| CTGCGCACCCACATGCCTAA+CGG | - | 57577:4770-4789 | None:intergenic | 60.0% | |
| CTTCCTTAACCAGTGCCCCG+GGG | + | 57577:6055-6074 | MS.gene29940:intron | 60.0% | |
| GAGTAATGCAGGGGTGGCAG+TGG | - | 57577:6989-7008 | None:intergenic | 60.0% | |
| GCTTCCTTAACCAGTGCCCC+GGG | + | 57577:6054-6073 | MS.gene29940:intron | 60.0% | |
| GTCATGTTAACCGGTGCCCC+CGG | - | 57577:6075-6094 | None:intergenic | 60.0% | |
| TCAGCCCATCCAGCCCACAT+TGG | + | 57577:7360-7379 | MS.gene29940:CDS | 60.0% | |
| TCATGTTAACCGGTGCCCCC+GGG | - | 57577:6074-6093 | None:intergenic | 60.0% | |
| TGCCACGTCGGATCCTGGAT+GGG | - | 57577:3392-3411 | None:intergenic | 60.0% | |
| TGCGCACCCACATGCCTAAC+GGG | - | 57577:4769-4788 | None:intergenic | 60.0% | |
| TTCCTTAACCAGTGCCCCGG+GGG | + | 57577:6056-6075 | MS.gene29940:intron | 60.0% | |
| TTGCTCCGAACAATCGCCGC+CGG | + | 57577:2864-2883 | MS.gene29940:CDS | 60.0% | |
| ! | AGTTGCTTTGGGCTGCAGCG+TGG | + | 57577:4382-4401 | MS.gene29940:CDS | 60.0% |
| !! | GGCTGGATGGGCTGAAACTG+AGG | - | 57577:7355-7374 | None:intergenic | 60.0% |
| !! | GTGGCAGTGGTGTCACCACA+TGG | - | 57577:6976-6995 | None:intergenic | 60.0% |
| CATCCAGGATCCGACGTGGC+AGG | + | 57577:3391-3410 | MS.gene29940:CDS | 65.0% | |
| CATGTTAACCGGTGCCCCCG+GGG | - | 57577:6073-6092 | None:intergenic | 65.0% | |
| CGTGACCGGCGGCGATTGTT+CGG | - | 57577:2872-2891 | None:intergenic | 65.0% | |
| CTCCTTAACCAGTGCCCCGG+GGG | - | 57577:5942-5961 | None:intergenic | 65.0% | |
| CTGCCACGTCGGATCCTGGA+TGG | - | 57577:3393-3412 | None:intergenic | 65.0% | |
| GCCGGCGTCGTAGTAACCTC+CGG | - | 57577:3104-3123 | None:intergenic | 65.0% | |
| GCGCACCCACATGCCTAACG+GGG | - | 57577:4768-4787 | None:intergenic | 65.0% | |
| GGAAGCAGCGGCAAGTGCAG+CGG | - | 57577:3425-3444 | None:intergenic | 65.0% | |
| GGCGGTTTCACCTGCCACGT+CGG | - | 57577:3404-3423 | None:intergenic | 65.0% | |
| GGCTGCAGCGTGGTTGCACA+AGG | + | 57577:4392-4411 | MS.gene29940:CDS | 65.0% | |
| GTCCCATCCAGGATCCGACG+TGG | + | 57577:3387-3406 | MS.gene29940:CDS | 65.0% | |
| TCACCTGCCACGTCGGATCC+TGG | - | 57577:3397-3416 | None:intergenic | 65.0% | |
| TTCCAGAGTCACGGCGCCAG+TGG | - | 57577:2974-2993 | None:intergenic | 65.0% | |
| !! | ATTCACGACGGTGCCACCGC+CGG | + | 57577:2993-3012 | MS.gene29940:CDS | 65.0% |
| AGCAGCGGCAAGTGCAGCGG+CGG | - | 57577:3422-3441 | None:intergenic | 70.0% | |
| ATGGGCACACTGCCCGGCGT+AGG | - | 57577:3941-3960 | None:intergenic | 70.0% | |
| CTCCACTGGCGCCGTGACTC+TGG | + | 57577:2969-2988 | MS.gene29940:CDS | 70.0% | |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | + | 57577:5937-5956 | MS.gene29940:intron | 70.0% |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | - | 57577:5956-5937 | None:intergenic | 70.0% |
| AACCAGTGCCCCCGGGGCAC+TGG | + | 57577:5931-5950 | MS.gene29940:intron | 75.0% | |
| ! | AACCAGTGCCCCGGGGGCAC+CGG | + | 57577:6062-6081 | MS.gene29940:intron | 75.0% |
| ! | AACCAGTGCCCCGGGGGCAC+TGG | - | 57577:6081-6062 | None:intergenic | 75.0% |
| ! | AACCGGTGCCCCCGGGGCAC+TGG | - | 57577:6067-6086 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 57577 | gene | 2804 | 7578 | 2804 | ID=MS.gene29940 |
| 57577 | mRNA | 2804 | 7578 | 2804 | ID=MS.gene29940.t1;Parent=MS.gene29940 |
| 57577 | exon | 2804 | 3016 | 2804 | ID=MS.gene29940.t1.exon1;Parent=MS.gene29940.t1 |
| 57577 | CDS | 2804 | 3016 | 2804 | ID=cds.MS.gene29940.t1;Parent=MS.gene29940.t1 |
| 57577 | exon | 3091 | 3504 | 3091 | ID=MS.gene29940.t1.exon2;Parent=MS.gene29940.t1 |
| 57577 | CDS | 3091 | 3504 | 3091 | ID=cds.MS.gene29940.t1;Parent=MS.gene29940.t1 |
| 57577 | exon | 3894 | 3986 | 3894 | ID=MS.gene29940.t1.exon3;Parent=MS.gene29940.t1 |
| 57577 | CDS | 3894 | 3986 | 3894 | ID=cds.MS.gene29940.t1;Parent=MS.gene29940.t1 |
| 57577 | exon | 4378 | 4539 | 4378 | ID=MS.gene29940.t1.exon4;Parent=MS.gene29940.t1 |
| 57577 | CDS | 4378 | 4539 | 4378 | ID=cds.MS.gene29940.t1;Parent=MS.gene29940.t1 |
| 57577 | exon | 6421 | 6532 | 6421 | ID=MS.gene29940.t1.exon5;Parent=MS.gene29940.t1 |
| 57577 | CDS | 6421 | 6532 | 6421 | ID=cds.MS.gene29940.t1;Parent=MS.gene29940.t1 |
| 57577 | exon | 6866 | 7029 | 6866 | ID=MS.gene29940.t1.exon6;Parent=MS.gene29940.t1 |
| 57577 | CDS | 6866 | 7029 | 6866 | ID=cds.MS.gene29940.t1;Parent=MS.gene29940.t1 |
| 57577 | exon | 7252 | 7578 | 7252 | ID=MS.gene29940.t1.exon7;Parent=MS.gene29940.t1 |
| 57577 | CDS | 7252 | 7578 | 7252 | ID=cds.MS.gene29940.t1;Parent=MS.gene29940.t1 |
| Gene Sequence |
| Protein sequence |
