Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88560.t1 | XP_013466866.1 | 92.9 | 465 | 20 | 1 | 1 | 452 | 17 | 481 | 3.80E-253 | 883.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88560.t1 | O64890 | 60.8 | 464 | 167 | 3 | 1 | 450 | 25 | 487 | 3.8e-161 | 569.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88560.t1 | A0A072VGL9 | 92.9 | 465 | 20 | 1 | 1 | 452 | 17 | 481 | 2.7e-253 | 883.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88560.t1 | MTR_1g037340 | 92.903 | 465 | 20 | 1 | 1 | 452 | 17 | 481 | 0.0 | 866 |
MS.gene88560.t1 | MTR_8g099410 | 52.586 | 464 | 200 | 5 | 9 | 452 | 28 | 491 | 1.17e-166 | 479 |
MS.gene88560.t1 | MTR_8g099410 | 52.586 | 464 | 200 | 5 | 9 | 452 | 28 | 491 | 2.27e-165 | 480 |
MS.gene88560.t1 | MTR_5g085730 | 49.041 | 469 | 217 | 6 | 4 | 450 | 26 | 494 | 3.59e-160 | 462 |
MS.gene88560.t1 | MTR_4g074960 | 51.613 | 465 | 204 | 6 | 9 | 452 | 28 | 492 | 4.06e-160 | 466 |
MS.gene88560.t1 | MTR_3g080190 | 48.922 | 464 | 215 | 6 | 9 | 450 | 40 | 503 | 3.21e-157 | 456 |
MS.gene88560.t1 | MTR_5g093590 | 48.608 | 467 | 217 | 7 | 9 | 452 | 34 | 500 | 1.61e-151 | 440 |
MS.gene88560.t1 | MTR_3g080810 | 47.300 | 463 | 221 | 8 | 9 | 452 | 35 | 493 | 6.62e-140 | 410 |
MS.gene88560.t1 | MTR_3g010330 | 46.895 | 467 | 227 | 7 | 3 | 452 | 18 | 480 | 5.53e-135 | 397 |
MS.gene88560.t1 | MTR_8g104820 | 46.921 | 471 | 219 | 9 | 6 | 452 | 27 | 490 | 3.19e-134 | 396 |
MS.gene88560.t1 | MTR_5g009970 | 46.004 | 463 | 221 | 8 | 9 | 452 | 41 | 493 | 3.89e-133 | 393 |
MS.gene88560.t1 | MTR_3g117500 | 46.300 | 473 | 225 | 11 | 3 | 452 | 18 | 484 | 2.80e-131 | 388 |
MS.gene88560.t1 | MTR_5g010000 | 46.087 | 460 | 225 | 6 | 9 | 452 | 40 | 492 | 3.25e-131 | 389 |
MS.gene88560.t1 | MTR_4g035930 | 44.111 | 467 | 240 | 7 | 1 | 452 | 7 | 467 | 3.58e-130 | 384 |
MS.gene88560.t1 | MTR_4g035955 | 45.396 | 467 | 233 | 8 | 1 | 452 | 7 | 466 | 8.52e-129 | 381 |
MS.gene88560.t1 | MTR_1g088190 | 44.989 | 469 | 216 | 10 | 4 | 453 | 34 | 479 | 3.16e-121 | 362 |
MS.gene88560.t1 | MTR_3g105230 | 42.601 | 446 | 232 | 8 | 9 | 439 | 30 | 466 | 3.87e-120 | 359 |
MS.gene88560.t1 | MTR_4g035975 | 43.497 | 469 | 234 | 10 | 9 | 452 | 27 | 489 | 3.25e-118 | 355 |
MS.gene88560.t1 | MTR_3g113720 | 42.644 | 469 | 235 | 11 | 10 | 452 | 58 | 518 | 1.14e-115 | 349 |
MS.gene88560.t1 | MTR_3g023740 | 43.043 | 460 | 238 | 8 | 9 | 453 | 30 | 480 | 7.83e-115 | 346 |
MS.gene88560.t1 | MTR_5g009970 | 44.181 | 421 | 206 | 8 | 51 | 452 | 9 | 419 | 4.03e-112 | 337 |
MS.gene88560.t1 | MTR_8g075990 | 41.026 | 468 | 244 | 10 | 10 | 452 | 64 | 524 | 5.91e-104 | 320 |
MS.gene88560.t1 | MTR_5g009970 | 42.786 | 402 | 201 | 8 | 70 | 452 | 1 | 392 | 4.15e-100 | 305 |
MS.gene88560.t1 | MTR_5g009970 | 45.509 | 334 | 166 | 7 | 125 | 452 | 1 | 324 | 3.58e-82 | 257 |
MS.gene88560.t1 | MTR_2g028480 | 38.821 | 492 | 240 | 15 | 9 | 452 | 111 | 589 | 5.95e-82 | 265 |
MS.gene88560.t1 | MTR_3g090540 | 35.354 | 495 | 263 | 18 | 3 | 452 | 101 | 583 | 3.88e-77 | 252 |
MS.gene88560.t1 | MTR_3g082440 | 36.961 | 487 | 253 | 16 | 9 | 452 | 116 | 591 | 1.54e-76 | 251 |
MS.gene88560.t1 | MTR_1g037320 | 78.226 | 124 | 27 | 0 | 327 | 450 | 166 | 289 | 9.71e-66 | 213 |
MS.gene88560.t1 | MTR_1g037320 | 70.625 | 160 | 34 | 1 | 70 | 216 | 1 | 160 | 1.94e-63 | 207 |
MS.gene88560.t1 | MTR_1g088190 | 43.269 | 312 | 137 | 7 | 4 | 297 | 34 | 323 | 1.76e-65 | 214 |
MS.gene88560.t1 | MTR_4g047570 | 71.681 | 113 | 12 | 2 | 239 | 350 | 1 | 94 | 9.99e-44 | 149 |
MS.gene88560.t1 | MTR_7g108925 | 44.048 | 168 | 91 | 3 | 288 | 453 | 33 | 199 | 3.92e-42 | 149 |
MS.gene88560.t1 | MTR_0393s0050 | 46.377 | 138 | 72 | 2 | 297 | 432 | 19 | 156 | 8.81e-36 | 131 |
MS.gene88560.t1 | MTR_4g128810 | 30.364 | 247 | 140 | 7 | 208 | 452 | 117 | 333 | 3.45e-21 | 95.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88560.t1 | AT2G44570 | 61.739 | 460 | 161 | 3 | 6 | 450 | 30 | 489 | 0.0 | 565 |
MS.gene88560.t1 | AT2G44550 | 60.515 | 466 | 169 | 3 | 1 | 452 | 25 | 489 | 0.0 | 556 |
MS.gene88560.t1 | AT2G44540 | 59.483 | 464 | 174 | 2 | 1 | 450 | 25 | 488 | 0.0 | 550 |
MS.gene88560.t1 | AT2G44560 | 59.914 | 464 | 172 | 2 | 1 | 450 | 25 | 488 | 0.0 | 535 |
MS.gene88560.t1 | AT1G64390 | 53.233 | 464 | 197 | 5 | 9 | 452 | 25 | 488 | 4.81e-169 | 489 |
MS.gene88560.t1 | AT4G11050 | 52.778 | 468 | 201 | 5 | 5 | 452 | 22 | 489 | 5.28e-168 | 484 |
MS.gene88560.t1 | AT4G11050 | 52.778 | 468 | 201 | 5 | 5 | 452 | 22 | 489 | 2.35e-167 | 485 |
MS.gene88560.t1 | AT4G11050 | 52.778 | 468 | 201 | 5 | 5 | 452 | 22 | 489 | 2.42e-167 | 485 |
MS.gene88560.t1 | AT2G32990 | 48.188 | 469 | 221 | 6 | 4 | 450 | 34 | 502 | 1.42e-154 | 449 |
MS.gene88560.t1 | AT1G02800 | 49.359 | 468 | 215 | 7 | 3 | 453 | 37 | 499 | 4.44e-147 | 429 |
MS.gene88560.t1 | AT2G44570 | 57.754 | 374 | 144 | 2 | 6 | 365 | 30 | 403 | 1.62e-146 | 424 |
MS.gene88560.t1 | AT1G48930 | 49.032 | 465 | 211 | 6 | 9 | 450 | 30 | 491 | 3.13e-142 | 421 |
MS.gene88560.t1 | AT1G23210 | 47.436 | 468 | 218 | 8 | 6 | 452 | 25 | 485 | 1.17e-137 | 404 |
MS.gene88560.t1 | AT4G02290 | 47.335 | 469 | 221 | 8 | 5 | 453 | 48 | 510 | 2.20e-135 | 399 |
MS.gene88560.t1 | AT1G70710 | 47.436 | 468 | 218 | 8 | 6 | 452 | 25 | 485 | 2.42e-135 | 399 |
MS.gene88560.t1 | AT1G71380 | 46.436 | 463 | 227 | 7 | 6 | 452 | 21 | 478 | 3.99e-132 | 390 |
MS.gene88560.t1 | AT4G23560 | 46.957 | 460 | 220 | 7 | 9 | 452 | 23 | 474 | 1.02e-128 | 381 |
MS.gene88560.t1 | AT4G39010 | 45.842 | 469 | 222 | 10 | 9 | 452 | 29 | 490 | 1.41e-128 | 382 |
MS.gene88560.t1 | AT1G22880 | 45.043 | 464 | 234 | 7 | 6 | 453 | 21 | 479 | 1.58e-127 | 378 |
MS.gene88560.t1 | AT4G09740 | 46.039 | 467 | 228 | 7 | 2 | 452 | 16 | 474 | 6.59e-127 | 377 |
MS.gene88560.t1 | AT3G43860 | 44.915 | 472 | 231 | 9 | 2 | 453 | 22 | 484 | 1.92e-124 | 370 |
MS.gene88560.t1 | AT3G43860 | 44.915 | 472 | 231 | 9 | 2 | 453 | 22 | 484 | 1.92e-124 | 370 |
MS.gene88560.t1 | AT1G19940 | 45.435 | 460 | 223 | 10 | 9 | 447 | 48 | 500 | 2.70e-123 | 369 |
MS.gene88560.t1 | AT1G19940 | 45.435 | 460 | 223 | 10 | 9 | 447 | 48 | 500 | 2.70e-123 | 369 |
MS.gene88560.t1 | AT4G38990 | 45.094 | 479 | 216 | 15 | 9 | 452 | 23 | 489 | 1.64e-113 | 343 |
MS.gene88560.t1 | AT4G39000 | 44.444 | 468 | 230 | 11 | 9 | 452 | 25 | 486 | 2.59e-113 | 342 |
MS.gene88560.t1 | AT1G75680 | 43.556 | 450 | 228 | 9 | 10 | 439 | 58 | 501 | 3.85e-111 | 338 |
MS.gene88560.t1 | AT4G02290 | 44.059 | 404 | 200 | 8 | 70 | 453 | 1 | 398 | 4.42e-101 | 308 |
MS.gene88560.t1 | AT1G22880 | 42.500 | 400 | 209 | 7 | 70 | 453 | 1 | 395 | 2.30e-100 | 306 |
MS.gene88560.t1 | AT4G39010 | 43.478 | 368 | 172 | 9 | 9 | 349 | 29 | 387 | 6.24e-91 | 281 |
MS.gene88560.t1 | AT1G19940 | 44.353 | 363 | 178 | 8 | 9 | 350 | 48 | 407 | 2.86e-88 | 275 |
MS.gene88560.t1 | AT5G49720 | 38.493 | 491 | 243 | 16 | 9 | 452 | 108 | 586 | 1.01e-75 | 249 |
MS.gene88560.t1 | AT4G24260 | 38.008 | 492 | 244 | 17 | 9 | 452 | 108 | 586 | 4.82e-75 | 247 |
MS.gene88560.t1 | AT1G65610 | 36.475 | 488 | 253 | 16 | 9 | 452 | 116 | 590 | 1.04e-74 | 246 |
MS.gene88560.t1 | AT1G22880 | 45.603 | 307 | 149 | 4 | 6 | 298 | 21 | 323 | 5.11e-74 | 236 |
MS.gene88560.t1 | AT4G38990 | 43.785 | 354 | 153 | 10 | 1 | 334 | 15 | 342 | 7.98e-74 | 236 |
MS.gene88560.t1 | AT4G24260 | 37.190 | 363 | 174 | 13 | 9 | 325 | 108 | 462 | 3.42e-42 | 156 |
MS.gene88560.t1 | AT4G24260 | 40.138 | 289 | 130 | 9 | 9 | 258 | 108 | 392 | 5.72e-41 | 152 |
Find 92 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGTGGAGTCTTCTGGTATT+TGG | 0.150871 | 1.4:-22894567 | MS.gene88560:CDS |
ATTGCTCCATCCAAAGTATT+AGG | 0.186529 | 1.4:+22893928 | None:intergenic |
TGCTGAAACTGCTGCTGCTT+TGG | 0.209306 | 1.4:-22895818 | MS.gene88560:CDS |
TTTATAGGTGGACTACATAT+TGG | 0.248794 | 1.4:-22894112 | MS.gene88560:intron |
ACCATGTAACTCATCTGTTT+TGG | 0.290426 | 1.4:+22894081 | None:intergenic |
AGTGGAGTCTTCTGGTATTT+GGG | 0.295567 | 1.4:-22894566 | MS.gene88560:CDS |
TGTTGCATGAACTAGCATTT+TGG | 0.307097 | 1.4:+22895750 | None:intergenic |
GTTGGTGTTCTTGCTTATCT+AGG | 0.309346 | 1.4:-22893817 | MS.gene88560:CDS |
CAACACCTAGGAATTCTTAT+AGG | 0.310428 | 1.4:-22895873 | MS.gene88560:CDS |
GATGGGGCAGTGGAGTCTTC+TGG | 0.317246 | 1.4:-22894574 | MS.gene88560:CDS |
ATATTCCAGCAGCGGATATA+AGG | 0.337575 | 1.4:-22895208 | MS.gene88560:intron |
ACAAACAGGATGAATTACTA+TGG | 0.338358 | 1.4:-22894856 | MS.gene88560:intron |
CAGTAGTTGGCTCTCCTAAC+TGG | 0.338811 | 1.4:+22893857 | None:intergenic |
TTGCTCCATCCAAAGTATTA+GGG | 0.349731 | 1.4:+22893929 | None:intergenic |
TTATAGGTGGACTACATATT+GGG | 0.358721 | 1.4:-22894111 | MS.gene88560:intron |
ATGAGTTACATGGTGGGATA+TGG | 0.363651 | 1.4:-22894072 | MS.gene88560:CDS |
TGCACCAAACCCTAATACTT+TGG | 0.364579 | 1.4:-22893938 | MS.gene88560:CDS |
ATTTCTCCATACAAAACATT+TGG | 0.377809 | 1.4:+22895946 | None:intergenic |
AAACACCAGGAGGTTTGTTA+TGG | 0.384236 | 1.4:-22894474 | MS.gene88560:CDS |
AATGTTGCTTGTGCTGATTA+TGG | 0.385786 | 1.4:-22896742 | MS.gene88560:CDS |
CTTAAAGATGGCCAAGATGC+TGG | 0.392573 | 1.4:-22896625 | MS.gene88560:CDS |
GTTTCTGTTGCACCTTTAGT+TGG | 0.395270 | 1.4:-22893835 | MS.gene88560:CDS |
GTGCAAGAACAATGTTTAGT+TGG | 0.403821 | 1.4:-22894757 | MS.gene88560:CDS |
AGTTGGGATGACAAGTATCT+TGG | 0.409837 | 1.4:-22894740 | MS.gene88560:CDS |
GTTTGTTATGGTTTCAGCCA+TGG | 0.423349 | 1.4:-22894462 | MS.gene88560:CDS |
CCATCCAAAGTATTAGGGTT+TGG | 0.434864 | 1.4:+22893934 | None:intergenic |
TGCAAGAACAATGTTTAGTT+GGG | 0.447959 | 1.4:-22894756 | MS.gene88560:CDS |
TTTGTTATGGTTTCAGCCAT+GGG | 0.452840 | 1.4:-22894461 | MS.gene88560:CDS |
CTCCATGTTACTCTCTGGTT+AGG | 0.455018 | 1.4:+22896661 | None:intergenic |
CCCCTCTCCATGTTACTCTC+TGG | 0.456953 | 1.4:+22896656 | None:intergenic |
CTCGATTACCTTGGAGGAGC+CGG | 0.462880 | 1.4:-22894791 | MS.gene88560:CDS |
TACTATTGTGGTATAAGCCT+TGG | 0.463657 | 1.4:+22895250 | None:intergenic |
CACATCTCTTGTTCAAGCTC+AGG | 0.464765 | 1.4:-22894323 | MS.gene88560:intron |
CAACACCACTACTACATTGA+AGG | 0.467522 | 1.4:+22894362 | None:intergenic |
AATAGGAATGACTTCCAGTT+AGG | 0.469464 | 1.4:-22893871 | MS.gene88560:CDS |
GCTGGAGACAATTTGAAGCT+AGG | 0.474008 | 1.4:-22896110 | MS.gene88560:CDS |
AGTAATTTACCCCAGCATCT+TGG | 0.479746 | 1.4:+22896614 | None:intergenic |
CTTGGAGGAGCCGGCGACAA+TGG | 0.487274 | 1.4:-22894782 | MS.gene88560:CDS |
TTACAACAACAATGCTATCA+TGG | 0.493153 | 1.4:-22896073 | MS.gene88560:CDS |
CAACATTGATGATCTGAGTC+AGG | 0.495400 | 1.4:+22895916 | None:intergenic |
AAATACCTCGATTACCTTGG+AGG | 0.498433 | 1.4:-22894797 | MS.gene88560:CDS |
CTAGGTGTTGACATATCCTC+TGG | 0.498608 | 1.4:+22895886 | None:intergenic |
TTAAAGATGGCCAAGATGCT+GGG | 0.499862 | 1.4:-22896624 | MS.gene88560:CDS |
GTTGGAGGATATTATGATGC+TGG | 0.501561 | 1.4:-22896128 | MS.gene88560:CDS |
ACAAGAGATGTGAGATCAGA+AGG | 0.503193 | 1.4:+22894334 | None:intergenic |
CCAAACCCTAATACTTTGGA+TGG | 0.503349 | 1.4:-22893934 | MS.gene88560:CDS |
TGCACAAATTCTTGCTGCAA+AGG | 0.510148 | 1.4:-22894717 | MS.gene88560:intron |
CATGTTACTCTCTGGTTAGG+AGG | 0.516741 | 1.4:+22896664 | None:intergenic |
CATTGTCGCCGGCTCCTCCA+AGG | 0.518707 | 1.4:+22894783 | None:intergenic |
ATTGTTGTTGTAAATGCCAT+TGG | 0.519034 | 1.4:+22896083 | None:intergenic |
CTGCTGGTGGGATACTATTG+TGG | 0.519945 | 1.4:+22895238 | None:intergenic |
AGACAAATATTGAGAATAAG+TGG | 0.523131 | 1.4:+22894399 | None:intergenic |
AGGATTGATGAACAACATCC+TGG | 0.527890 | 1.4:-22895853 | MS.gene88560:CDS |
GTCAACAGATTGAAAAGCAA+TGG | 0.528440 | 1.4:+22895786 | None:intergenic |
GATCACCTTATATCCGCTGC+TGG | 0.531376 | 1.4:+22895203 | None:intergenic |
TCAATCCTATAAGAATTCCT+AGG | 0.537494 | 1.4:+22895868 | None:intergenic |
CATCATAATATCCTCCAACT+AGG | 0.538036 | 1.4:+22896132 | None:intergenic |
CATGTGCAGATTGACCTAGT+TGG | 0.539382 | 1.4:-22896146 | MS.gene88560:intron |
AAGCCATCTTTGCATCCTAC+CGG | 0.545053 | 1.4:+22893982 | None:intergenic |
CCTCTATGATGAATTTGTTG+TGG | 0.545265 | 1.4:+22894039 | None:intergenic |
AACACCACTACTACATTGAA+GGG | 0.556342 | 1.4:+22894363 | None:intergenic |
TCAGCAGCAAGATCAGAGCC+AGG | 0.559234 | 1.4:+22895835 | None:intergenic |
GGGGATTCTGCACTTAAAGA+TGG | 0.560127 | 1.4:-22896637 | MS.gene88560:CDS |
CTGACTCAGATCATCAATGT+TGG | 0.570776 | 1.4:-22895915 | MS.gene88560:CDS |
TAAGCAAGAACACCAACTAA+AGG | 0.577826 | 1.4:+22893823 | None:intergenic |
ACCAGAGAGTAACATGGAGA+GGG | 0.579071 | 1.4:-22896657 | MS.gene88560:CDS |
TCTTGCACCTCCATTGTCGC+CGG | 0.579248 | 1.4:+22894772 | None:intergenic |
TCACCGGTAGGATGCAAAGA+TGG | 0.579566 | 1.4:-22893985 | MS.gene88560:CDS |
GGTGCAACAGAAACAGTAGT+TGG | 0.582337 | 1.4:+22893844 | None:intergenic |
GTGCAGATTGACCTAGTTGG+AGG | 0.584135 | 1.4:-22896143 | MS.gene88560:intron |
ATAGAGTTCAAAGACCAACT+TGG | 0.584442 | 1.4:-22896044 | MS.gene88560:CDS |
CCACAACAAATTCATCATAG+AGG | 0.584665 | 1.4:-22894039 | MS.gene88560:CDS |
CAAACAGGATGAATTACTAT+GGG | 0.588140 | 1.4:-22894855 | MS.gene88560:intron |
AATTACTATGGGCAGCAGCA+TGG | 0.593166 | 1.4:-22894844 | MS.gene88560:CDS |
TGAAACCATAACAAACCTCC+TGG | 0.599556 | 1.4:+22894469 | None:intergenic |
GGAGGAGCCGGCGACAATGG+AGG | 0.601885 | 1.4:-22894779 | MS.gene88560:CDS |
AATCAAACAAGACAGTTCAC+CGG | 0.605226 | 1.4:-22894001 | MS.gene88560:CDS |
ACATATTGATTATTACCCCA+TGG | 0.605665 | 1.4:+22894445 | None:intergenic |
TCCAAAACAGATGAGTTACA+TGG | 0.607504 | 1.4:-22894082 | MS.gene88560:CDS |
GCTTCCCTTCAATGTAGTAG+TGG | 0.617577 | 1.4:-22894367 | MS.gene88560:CDS |
AACCAGAGAGTAACATGGAG+AGG | 0.618242 | 1.4:-22896658 | MS.gene88560:CDS |
CAAGAGATGTGAGATCAGAA+GGG | 0.623937 | 1.4:+22894335 | None:intergenic |
TAAAGATGGCCAAGATGCTG+GGG | 0.633585 | 1.4:-22896623 | MS.gene88560:intron |
AAACAAGACAGTTCACCGGT+AGG | 0.661944 | 1.4:-22893997 | MS.gene88560:CDS |
CGGCTCCTCCAAGGTAATCG+AGG | 0.662604 | 1.4:+22894792 | None:intergenic |
AAAACAGATGAGTTACATGG+TGG | 0.664029 | 1.4:-22894079 | MS.gene88560:CDS |
TTGTTATGGTTTCAGCCATG+GGG | 0.671553 | 1.4:-22894460 | MS.gene88560:CDS |
CTCCTAACCAGAGAGTAACA+TGG | 0.672461 | 1.4:-22896663 | MS.gene88560:CDS |
CAGAGGATATGTCAACACCT+AGG | 0.678701 | 1.4:-22895885 | MS.gene88560:CDS |
TCAATGTTGGCAAAGACCAG+AGG | 0.679190 | 1.4:-22895902 | MS.gene88560:CDS |
AAACAGATGAGTTACATGGT+GGG | 0.680002 | 1.4:-22894078 | MS.gene88560:CDS |
CCAGAGAGTAACATGGAGAG+GGG | 0.683701 | 1.4:-22896656 | MS.gene88560:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAGATAAATTATAAACAAA+TGG | + | chr1.4:22894987-22895006 | None:intergenic | 10.0% |
!!! | AGATTATTATATTTTTTGTT+TGG | - | chr1.4:22895239-22895258 | MS.gene88560:CDS | 10.0% |
!! | AATAAATTTCAAATTCCATA+AGG | + | chr1.4:22895685-22895704 | None:intergenic | 15.0% |
!! | TTTGAATAAAATGTTTCTTA+TGG | + | chr1.4:22894385-22894404 | None:intergenic | 15.0% |
!!! | AAAAAGTTTGTTATTTTTTG+AGG | - | chr1.4:22893857-22893876 | MS.gene88560:CDS | 15.0% |
!!! | AAAAGTTTGTTATTTTTTGA+GGG | - | chr1.4:22893858-22893877 | MS.gene88560:CDS | 15.0% |
!!! | AACAATATTTTCAATATAGA+TGG | + | chr1.4:22895900-22895919 | None:intergenic | 15.0% |
!!! | ATATTTTTTATTACTTTTGG+TGG | - | chr1.4:22894198-22894217 | MS.gene88560:intron | 15.0% |
!!! | TCATGTGTTTATTTTTTTAT+AGG | - | chr1.4:22896437-22896456 | MS.gene88560:intron | 15.0% |
!! | ATAGAAATATAGAAGTTCAA+AGG | + | chr1.4:22895395-22895414 | None:intergenic | 20.0% |
!! | CGAAAGGAAAAAAATATTTA+AGG | - | chr1.4:22895602-22895621 | MS.gene88560:intron | 20.0% |
!! | CTATTAGTATTTGAATCATT+AGG | + | chr1.4:22895529-22895548 | None:intergenic | 20.0% |
!! | CTTGAAAATATAGATTATGA+TGG | + | chr1.4:22896276-22896295 | None:intergenic | 20.0% |
!! | TGAAATTTATTTGTACAAAC+AGG | - | chr1.4:22895694-22895713 | MS.gene88560:intron | 20.0% |
!!! | GAAAATTCAAAGGTATAAAA+AGG | + | chr1.4:22893989-22894008 | None:intergenic | 20.0% |
!!! | TGTGTTTATTTTTTTATAGG+TGG | - | chr1.4:22896440-22896459 | MS.gene88560:intron | 20.0% |
! | AGAAAACTGATACATGATAA+AGG | + | chr1.4:22894061-22894080 | None:intergenic | 25.0% |
! | AGACAAATATTGAGAATAAG+TGG | + | chr1.4:22896168-22896187 | None:intergenic | 25.0% |
! | ATTTCTCCATACAAAACATT+TGG | + | chr1.4:22894621-22894640 | None:intergenic | 25.0% |
! | CGACACATTATATAAACAAA+TGG | + | chr1.4:22895052-22895071 | None:intergenic | 25.0% |
! | TGAAATGAAGGAAAATTCAA+AGG | + | chr1.4:22893999-22894018 | None:intergenic | 25.0% |
! | TTAGTATTTGAATCATTAGG+AGG | + | chr1.4:22895526-22895545 | None:intergenic | 25.0% |
! | TTATTCATTGAAATGCCATA+TGG | + | chr1.4:22894903-22894922 | None:intergenic | 25.0% |
!! | AATGTTTTGTATGGAGAAAT+TGG | - | chr1.4:22894621-22894640 | MS.gene88560:intron | 25.0% |
!! | AGATCAAAACGATGATTTTA+CGG | - | chr1.4:22896668-22896687 | MS.gene88560:CDS | 25.0% |
!! | ATTTTCAATATAGATGGAAG+AGG | + | chr1.4:22895894-22895913 | None:intergenic | 25.0% |
!!! | ATTTTGATTGATGTTTGTCA+TGG | - | chr1.4:22895464-22895483 | MS.gene88560:intron | 25.0% |
!!! | TAATGTAGCTTGTTTTAGAT+GGG | - | chr1.4:22895973-22895992 | MS.gene88560:CDS | 25.0% |
!!! | TGGTGTTTTCTGAAAATTTT+GGG | + | chr1.4:22896078-22896097 | None:intergenic | 25.0% |
!!! | TTAATGTAGCTTGTTTTAGA+TGG | - | chr1.4:22895972-22895991 | MS.gene88560:CDS | 25.0% |
!!! | TTACTTATTTTTGCTCCATA+TGG | - | chr1.4:22894885-22894904 | MS.gene88560:intron | 25.0% |
AAAAAATACCTCGATTACCT+TGG | - | chr1.4:22895764-22895783 | MS.gene88560:CDS | 30.0% | |
AAGACGCACTGTATATATAT+AGG | + | chr1.4:22894291-22894310 | None:intergenic | 30.0% | |
ACAAACAGGATGAATTACTA+TGG | - | chr1.4:22895708-22895727 | MS.gene88560:intron | 30.0% | |
ATAACTATTGTGAGTTCGAA+AGG | - | chr1.4:22895586-22895605 | MS.gene88560:intron | 30.0% | |
ATACTAATAGAGATACCTTG+AGG | - | chr1.4:22895539-22895558 | MS.gene88560:intron | 30.0% | |
CAAACAGGATGAATTACTAT+GGG | - | chr1.4:22895709-22895728 | MS.gene88560:intron | 30.0% | |
CAAACTAAAACATAGAGCTT+TGG | - | chr1.4:22894144-22894163 | MS.gene88560:intron | 30.0% | |
TCAATCCTATAAGAATTCCT+AGG | + | chr1.4:22894699-22894718 | None:intergenic | 30.0% | |
TGCAAGAACAATGTTTAGTT+GGG | - | chr1.4:22895808-22895827 | MS.gene88560:CDS | 30.0% | |
TTACAACAACAATGCTATCA+TGG | - | chr1.4:22894491-22894510 | MS.gene88560:CDS | 30.0% | |
TTTGTCATGGTTAGAATGAT+CGG | - | chr1.4:22895477-22895496 | MS.gene88560:intron | 30.0% | |
! | ACATATTGATTATTACCCCA+TGG | + | chr1.4:22896122-22896141 | None:intergenic | 30.0% |
! | ACGATGATTTTACGGATAAT+AGG | - | chr1.4:22896676-22896695 | MS.gene88560:CDS | 30.0% |
! | ATCAGTTTTCTAAGTTCCTA+GGG | - | chr1.4:22894070-22894089 | MS.gene88560:CDS | 30.0% |
! | ATTGTTGTTGTAAATGCCAT+TGG | + | chr1.4:22894484-22894503 | None:intergenic | 30.0% |
! | CAAAATTTTCAGAAAACACC+AGG | - | chr1.4:22896077-22896096 | MS.gene88560:CDS | 30.0% |
! | GATTTTGCAAACAATAACCA+AGG | - | chr1.4:22895297-22895316 | MS.gene88560:intron | 30.0% |
! | GCATTTTCGTTATGAAATGA+AGG | + | chr1.4:22894011-22894030 | None:intergenic | 30.0% |
! | TATCAGTTTTCTAAGTTCCT+AGG | - | chr1.4:22894069-22894088 | MS.gene88560:CDS | 30.0% |
! | TCACAACCAAATGTTTTGTA+TGG | - | chr1.4:22894612-22894631 | MS.gene88560:intron | 30.0% |
!! | AAAACATAGAGCTTTGGTTT+TGG | - | chr1.4:22894150-22894169 | MS.gene88560:intron | 30.0% |
!! | CTGGTGTTTTCTGAAAATTT+TGG | + | chr1.4:22896079-22896098 | None:intergenic | 30.0% |
!! | GTAAAATCATCGTTTTGATC+TGG | + | chr1.4:22896669-22896688 | None:intergenic | 30.0% |
!! | TTATAGGTGGACTACATATT+GGG | - | chr1.4:22896453-22896472 | MS.gene88560:intron | 30.0% |
!! | TTTATAGGTGGACTACATAT+TGG | - | chr1.4:22896452-22896471 | MS.gene88560:intron | 30.0% |
!!! | AATGTAGCTTGTTTTAGATG+GGG | - | chr1.4:22895974-22895993 | MS.gene88560:CDS | 30.0% |
!!! | ATTTTTTCAAGTTTGTAGCG+CGG | + | chr1.4:22895751-22895770 | None:intergenic | 30.0% |
AAAACAGATGAGTTACATGG+TGG | - | chr1.4:22896485-22896504 | MS.gene88560:intron | 35.0% | |
AAACAGATGAGTTACATGGT+GGG | - | chr1.4:22896486-22896505 | MS.gene88560:intron | 35.0% | |
AACACCACTACTACATTGAA+GGG | + | chr1.4:22896204-22896223 | None:intergenic | 35.0% | |
AATAGGAATGACTTCCAGTT+AGG | - | chr1.4:22896693-22896712 | MS.gene88560:CDS | 35.0% | |
AATCAAACAAGACAGTTCAC+CGG | - | chr1.4:22896563-22896582 | MS.gene88560:intron | 35.0% | |
ACGCACTGTATATATATAGG+CGG | + | chr1.4:22894288-22894307 | None:intergenic | 35.0% | |
ATAACCTAGACGAACAAAGA+CGG | + | chr1.4:22894337-22894356 | None:intergenic | 35.0% | |
ATAACGAAAATGCAGAAGAC+TGG | - | chr1.4:22894018-22894037 | MS.gene88560:CDS | 35.0% | |
ATACCTTGAGGAACATATTG+AGG | - | chr1.4:22895551-22895570 | MS.gene88560:intron | 35.0% | |
ATAGAGTTCAAAGACCAACT+TGG | - | chr1.4:22894520-22894539 | MS.gene88560:CDS | 35.0% | |
ATATAATCTCATACAGCCCT+AGG | + | chr1.4:22894089-22894108 | None:intergenic | 35.0% | |
ATGCATTAGCAGCCATAAAA+TGG | - | chr1.4:22894563-22894582 | MS.gene88560:CDS | 35.0% | |
CAAATTCCATAAGGCTCAAA+TGG | + | chr1.4:22895676-22895695 | None:intergenic | 35.0% | |
CAACACCTAGGAATTCTTAT+AGG | - | chr1.4:22894691-22894710 | MS.gene88560:intron | 35.0% | |
CATCATAATATCCTCCAACT+AGG | + | chr1.4:22894435-22894454 | None:intergenic | 35.0% | |
CCACAACAAATTCATCATAG+AGG | - | chr1.4:22896525-22896544 | MS.gene88560:intron | 35.0% | |
GTCAACAGATTGAAAAGCAA+TGG | + | chr1.4:22894781-22894800 | None:intergenic | 35.0% | |
GTGCAAGAACAATGTTTAGT+TGG | - | chr1.4:22895807-22895826 | MS.gene88560:CDS | 35.0% | |
TAAGCAAGAACACCAACTAA+AGG | + | chr1.4:22896744-22896763 | None:intergenic | 35.0% | |
TACCTTGAGGAACATATTGA+GGG | - | chr1.4:22895552-22895571 | MS.gene88560:intron | 35.0% | |
TACTATTGTGGTATAAGCCT+TGG | + | chr1.4:22895317-22895336 | None:intergenic | 35.0% | |
TAGTTCATGCAACACAAGTA+TGG | - | chr1.4:22894823-22894842 | MS.gene88560:CDS | 35.0% | |
TCCAAAACAGATGAGTTACA+TGG | - | chr1.4:22896482-22896501 | MS.gene88560:intron | 35.0% | |
TGCATTAGCAGCCATAAAAT+GGG | - | chr1.4:22894564-22894583 | MS.gene88560:CDS | 35.0% | |
! | AATTTTCAGAAAACACCAGG+AGG | - | chr1.4:22896080-22896099 | MS.gene88560:CDS | 35.0% |
! | ACCATGTAACTCATCTGTTT+TGG | + | chr1.4:22896486-22896505 | None:intergenic | 35.0% |
! | ATTGCTCCATCCAAAGTATT+AGG | + | chr1.4:22896639-22896658 | None:intergenic | 35.0% |
! | TGTTGCATGAACTAGCATTT+TGG | + | chr1.4:22894817-22894836 | None:intergenic | 35.0% |
! | TTGCTCCATCCAAAGTATTA+GGG | + | chr1.4:22896638-22896657 | None:intergenic | 35.0% |
! | TTTGTTATGGTTTCAGCCAT+GGG | - | chr1.4:22896103-22896122 | MS.gene88560:CDS | 35.0% |
! | TTTTATCTGCCTTATCGCTA+GGG | - | chr1.4:22896335-22896354 | MS.gene88560:intron | 35.0% |
!! | AATATGTTTTTGCTGCTGGT+GGG | + | chr1.4:22895341-22895360 | None:intergenic | 35.0% |
!! | AATGTTGCTTGTGCTGATTA+TGG | - | chr1.4:22893822-22893841 | MS.gene88560:CDS | 35.0% |
!! | CCTCTATGATGAATTTGTTG+TGG | + | chr1.4:22896528-22896547 | None:intergenic | 35.0% |
!! | GCAAAGATGGCTTTGAAAAA+TGG | - | chr1.4:22896592-22896611 | MS.gene88560:intron | 35.0% |
!! | TTTGAAGCTAGGTTTTCCAA+TGG | - | chr1.4:22894465-22894484 | MS.gene88560:CDS | 35.0% |
!!! | GCTCATTCTTTTTTCCAAGT+TGG | + | chr1.4:22894537-22894556 | None:intergenic | 35.0% |
AAATACCTCGATTACCTTGG+AGG | - | chr1.4:22895767-22895786 | MS.gene88560:CDS | 40.0% | |
AACCCTCAATATGTTCCTCA+AGG | + | chr1.4:22895557-22895576 | None:intergenic | 40.0% | |
ACAAGAGATGTGAGATCAGA+AGG | + | chr1.4:22896233-22896252 | None:intergenic | 40.0% | |
ACACTTCCATTTGAGCCTTA+TGG | - | chr1.4:22895667-22895686 | MS.gene88560:intron | 40.0% | |
AGGATTGATGAACAACATCC+TGG | - | chr1.4:22894711-22894730 | MS.gene88560:intron | 40.0% | |
AGTAATTTACCCCAGCATCT+TGG | + | chr1.4:22893953-22893972 | None:intergenic | 40.0% | |
AGTGGAGTCTTCTGGTATTT+GGG | - | chr1.4:22895998-22896017 | MS.gene88560:intron | 40.0% | |
AGTTGGGATGACAAGTATCT+TGG | - | chr1.4:22895824-22895843 | MS.gene88560:CDS | 40.0% | |
ATATTCCAGCAGCGGATATA+AGG | - | chr1.4:22895356-22895375 | MS.gene88560:intron | 40.0% | |
CAACACCACTACTACATTGA+AGG | + | chr1.4:22896205-22896224 | None:intergenic | 40.0% | |
CAAGAGATGTGAGATCAGAA+GGG | + | chr1.4:22896232-22896251 | None:intergenic | 40.0% | |
CCAAACCCTAATACTTTGGA+TGG | - | chr1.4:22896630-22896649 | MS.gene88560:CDS | 40.0% | |
CTGACTCAGATCATCAATGT+TGG | - | chr1.4:22894649-22894668 | MS.gene88560:intron | 40.0% | |
GCAAAAACATATTCCAGCAG+CGG | - | chr1.4:22895348-22895367 | MS.gene88560:intron | 40.0% | |
GCATTAGCAGCCATAAAATG+GGG | - | chr1.4:22894565-22894584 | MS.gene88560:CDS | 40.0% | |
GTTGGAGGATATTATGATGC+TGG | - | chr1.4:22894436-22894455 | MS.gene88560:CDS | 40.0% | |
GTTTCTGTTGCACCTTTAGT+TGG | - | chr1.4:22896729-22896748 | MS.gene88560:CDS | 40.0% | |
TAACCTAGACGAACAAAGAC+GGG | + | chr1.4:22894336-22894355 | None:intergenic | 40.0% | |
TGAAACCATAACAAACCTCC+TGG | + | chr1.4:22896098-22896117 | None:intergenic | 40.0% | |
TGCACAAATTCTTGCTGCAA+AGG | - | chr1.4:22895847-22895866 | MS.gene88560:CDS | 40.0% | |
TGCACCAAACCCTAATACTT+TGG | - | chr1.4:22896626-22896645 | MS.gene88560:CDS | 40.0% | |
TTAAAGATGGCCAAGATGCT+GGG | - | chr1.4:22893940-22893959 | MS.gene88560:CDS | 40.0% | |
TTGTTATGGTTTCAGCCATG+GGG | - | chr1.4:22896104-22896123 | MS.gene88560:CDS | 40.0% | |
! | ATGAGTTACATGGTGGGATA+TGG | - | chr1.4:22896492-22896511 | MS.gene88560:intron | 40.0% |
! | CAACATTGATGATCTGAGTC+AGG | + | chr1.4:22894651-22894670 | None:intergenic | 40.0% |
! | CCATCCAAAGTATTAGGGTT+TGG | + | chr1.4:22896633-22896652 | None:intergenic | 40.0% |
! | GTAGTCTGTTCCCCATTTTA+TGG | + | chr1.4:22894578-22894597 | None:intergenic | 40.0% |
! | GTTGGTGTTCTTGCTTATCT+AGG | - | chr1.4:22896747-22896766 | MS.gene88560:CDS | 40.0% |
! | GTTTTATCTGCCTTATCGCT+AGG | - | chr1.4:22896334-22896353 | MS.gene88560:intron | 40.0% |
! | TGCATGAACTAGCATTTTGG+AGG | + | chr1.4:22894814-22894833 | None:intergenic | 40.0% |
! | TGTGAGTGTTGTAAAGTTCG+TGG | + | chr1.4:22894960-22894979 | None:intergenic | 40.0% |
!! | AAACACCAGGAGGTTTGTTA+TGG | - | chr1.4:22896090-22896109 | MS.gene88560:CDS | 40.0% |
!! | CTGGAATATGTTTTTGCTGC+TGG | + | chr1.4:22895345-22895364 | None:intergenic | 40.0% |
!! | GAATATGTTTTTGCTGCTGG+TGG | + | chr1.4:22895342-22895361 | None:intergenic | 40.0% |
!! | GTTTGTTATGGTTTCAGCCA+TGG | - | chr1.4:22896102-22896121 | MS.gene88560:CDS | 40.0% |
!! | TTACTTTTGGTGGTAGCCAT+CGG | - | chr1.4:22894208-22894227 | MS.gene88560:intron | 40.0% |
!!! | TTTTTTGAGGGACAACGTTC+AGG | - | chr1.4:22893870-22893889 | MS.gene88560:CDS | 40.0% |
AAACAAGACAGTTCACCGGT+AGG | - | chr1.4:22896567-22896586 | MS.gene88560:intron | 45.0% | |
AACCAGAGAGTAACATGGAG+AGG | - | chr1.4:22893906-22893925 | MS.gene88560:CDS | 45.0% | |
AAGCCATCTTTGCATCCTAC+CGG | + | chr1.4:22896585-22896604 | None:intergenic | 45.0% | |
AATTACTATGGGCAGCAGCA+TGG | - | chr1.4:22895720-22895739 | MS.gene88560:intron | 45.0% | |
ACCAGAGAGTAACATGGAGA+GGG | - | chr1.4:22893907-22893926 | MS.gene88560:CDS | 45.0% | |
CACATCTCTTGTTCAAGCTC+AGG | - | chr1.4:22896241-22896260 | MS.gene88560:intron | 45.0% | |
CAGAGGATATGTCAACACCT+AGG | - | chr1.4:22894679-22894698 | MS.gene88560:intron | 45.0% | |
CAGTGGAGTCTTCTGGTATT+TGG | - | chr1.4:22895997-22896016 | MS.gene88560:intron | 45.0% | |
CATGTGCAGATTGACCTAGT+TGG | - | chr1.4:22894418-22894437 | MS.gene88560:CDS | 45.0% | |
CATGTTACTCTCTGGTTAGG+AGG | + | chr1.4:22893903-22893922 | None:intergenic | 45.0% | |
CTCCATGTTACTCTCTGGTT+AGG | + | chr1.4:22893906-22893925 | None:intergenic | 45.0% | |
CTCCTAACCAGAGAGTAACA+TGG | - | chr1.4:22893901-22893920 | MS.gene88560:CDS | 45.0% | |
CTTAAAGATGGCCAAGATGC+TGG | - | chr1.4:22893939-22893958 | MS.gene88560:CDS | 45.0% | |
GCTTCCCTTCAATGTAGTAG+TGG | - | chr1.4:22896197-22896216 | MS.gene88560:intron | 45.0% | |
GGGGATTCTGCACTTAAAGA+TGG | - | chr1.4:22893927-22893946 | MS.gene88560:CDS | 45.0% | |
GGTGCAACAGAAACAGTAGT+TGG | + | chr1.4:22896723-22896742 | None:intergenic | 45.0% | |
TAAAGATGGCCAAGATGCTG+GGG | - | chr1.4:22893941-22893960 | MS.gene88560:CDS | 45.0% | |
TCAATGTTGGCAAAGACCAG+AGG | - | chr1.4:22894662-22894681 | MS.gene88560:intron | 45.0% | |
! | GCTGGAGACAATTTGAAGCT+AGG | - | chr1.4:22894454-22894473 | MS.gene88560:CDS | 45.0% |
!! | CTAGGTGTTGACATATCCTC+TGG | + | chr1.4:22894681-22894700 | None:intergenic | 45.0% |
!! | ATATTAAAAAAAATTAAACA+AGG | - | chr1.4:22895168-22895187 | MS.gene88560:intron | 5.0% |
!!! | ATAATATTTTTTATTACTTT+TGG | - | chr1.4:22894195-22894214 | MS.gene88560:intron | 5.0% |
CCAGAGAGTAACATGGAGAG+GGG | - | chr1.4:22893908-22893927 | MS.gene88560:CDS | 50.0% | |
CCTCTCAAACCCTAGCGATA+AGG | + | chr1.4:22896347-22896366 | None:intergenic | 50.0% | |
CCTTATCGCTAGGGTTTGAG+AGG | - | chr1.4:22896344-22896363 | MS.gene88560:intron | 50.0% | |
CTGCTGGTGGGATACTATTG+TGG | + | chr1.4:22895329-22895348 | None:intergenic | 50.0% | |
GATCACCTTATATCCGCTGC+TGG | + | chr1.4:22895364-22895383 | None:intergenic | 50.0% | |
GTGCAGATTGACCTAGTTGG+AGG | - | chr1.4:22894421-22894440 | MS.gene88560:CDS | 50.0% | |
TAAAGACGCCATCCAACCGA+TGG | + | chr1.4:22894227-22894246 | None:intergenic | 50.0% | |
TCACCGGTAGGATGCAAAGA+TGG | - | chr1.4:22896579-22896598 | MS.gene88560:intron | 50.0% | |
TTGCCCGTCTTTGTTCGTCT+AGG | - | chr1.4:22894330-22894349 | MS.gene88560:CDS | 50.0% | |
! | CAGTAGTTGGCTCTCCTAAC+TGG | + | chr1.4:22896710-22896729 | None:intergenic | 50.0% |
! | TGCTGAAACTGCTGCTGCTT+TGG | - | chr1.4:22894746-22894765 | MS.gene88560:CDS | 50.0% |
!! | TTTTGGTGGTAGCCATCGGT+TGG | - | chr1.4:22894212-22894231 | MS.gene88560:intron | 50.0% |
!!! | GCTTGTTTTAGATGGGGCAG+TGG | - | chr1.4:22895980-22895999 | MS.gene88560:intron | 50.0% |
CCCCTCTCCATGTTACTCTC+TGG | + | chr1.4:22893911-22893930 | None:intergenic | 55.0% | |
CTCGATTACCTTGGAGGAGC+CGG | - | chr1.4:22895773-22895792 | MS.gene88560:CDS | 55.0% | |
TCAGCAGCAAGATCAGAGCC+AGG | + | chr1.4:22894732-22894751 | None:intergenic | 55.0% | |
TCTTGCACCTCCATTGTCGC+CGG | + | chr1.4:22895795-22895814 | None:intergenic | 55.0% | |
CGGCTCCTCCAAGGTAATCG+AGG | + | chr1.4:22895775-22895794 | None:intergenic | 60.0% | |
GATGGGGCAGTGGAGTCTTC+TGG | - | chr1.4:22895990-22896009 | MS.gene88560:intron | 60.0% | |
! | GGTGGTAGCCATCGGTTGGA+TGG | - | chr1.4:22894216-22894235 | MS.gene88560:intron | 60.0% |
CTTGGAGGAGCCGGCGACAA+TGG | - | chr1.4:22895782-22895801 | MS.gene88560:CDS | 65.0% | |
!! | CATTGTCGCCGGCTCCTCCA+AGG | + | chr1.4:22895784-22895803 | None:intergenic | 65.0% |
GGAGGAGCCGGCGACAATGG+AGG | - | chr1.4:22895785-22895804 | MS.gene88560:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 22893813 | 22896773 | 22893813 | ID=MS.gene88560 |
chr1.4 | mRNA | 22893813 | 22896773 | 22893813 | ID=MS.gene88560.t1;Parent=MS.gene88560 |
chr1.4 | exon | 22896624 | 22896773 | 22896624 | ID=MS.gene88560.t1.exon1;Parent=MS.gene88560.t1 |
chr1.4 | CDS | 22896624 | 22896773 | 22896624 | ID=cds.MS.gene88560.t1;Parent=MS.gene88560.t1 |
chr1.4 | exon | 22896032 | 22896159 | 22896032 | ID=MS.gene88560.t1.exon2;Parent=MS.gene88560.t1 |
chr1.4 | CDS | 22896032 | 22896159 | 22896032 | ID=cds.MS.gene88560.t1;Parent=MS.gene88560.t1 |
chr1.4 | exon | 22895747 | 22895993 | 22895747 | ID=MS.gene88560.t1.exon3;Parent=MS.gene88560.t1 |
chr1.4 | CDS | 22895747 | 22895993 | 22895747 | ID=cds.MS.gene88560.t1;Parent=MS.gene88560.t1 |
chr1.4 | exon | 22895209 | 22895295 | 22895209 | ID=MS.gene88560.t1.exon4;Parent=MS.gene88560.t1 |
chr1.4 | CDS | 22895209 | 22895295 | 22895209 | ID=cds.MS.gene88560.t1;Parent=MS.gene88560.t1 |
chr1.4 | exon | 22894718 | 22894870 | 22894718 | ID=MS.gene88560.t1.exon5;Parent=MS.gene88560.t1 |
chr1.4 | CDS | 22894718 | 22894870 | 22894718 | ID=cds.MS.gene88560.t1;Parent=MS.gene88560.t1 |
chr1.4 | exon | 22894324 | 22894605 | 22894324 | ID=MS.gene88560.t1.exon6;Parent=MS.gene88560.t1 |
chr1.4 | CDS | 22894324 | 22894605 | 22894324 | ID=cds.MS.gene88560.t1;Parent=MS.gene88560.t1 |
chr1.4 | exon | 22893813 | 22894127 | 22893813 | ID=MS.gene88560.t1.exon7;Parent=MS.gene88560.t1 |
chr1.4 | CDS | 22893813 | 22894127 | 22893813 | ID=cds.MS.gene88560.t1;Parent=MS.gene88560.t1 |
Gene Sequence |
Protein sequence |