Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88559.t1 | XP_013466866.1 | 82.8 | 482 | 83 | 0 | 1 | 482 | 1 | 482 | 1.40E-237 | 832 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88559.t1 | O64890 | 58.8 | 473 | 193 | 2 | 8 | 479 | 16 | 487 | 1.4e-161 | 570.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88559.t1 | A0A072VGL9 | 82.8 | 482 | 83 | 0 | 1 | 482 | 1 | 482 | 1.0e-237 | 832.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88559.t1 | MTR_1g037340 | 82.780 | 482 | 83 | 0 | 1 | 482 | 1 | 482 | 0.0 | 818 |
| MS.gene88559.t1 | MTR_8g099410 | 53.548 | 465 | 209 | 5 | 25 | 482 | 28 | 492 | 3.97e-175 | 502 |
| MS.gene88559.t1 | MTR_8g099410 | 53.548 | 465 | 209 | 5 | 25 | 482 | 28 | 492 | 1.63e-173 | 502 |
| MS.gene88559.t1 | MTR_3g080190 | 50.103 | 487 | 225 | 7 | 5 | 479 | 23 | 503 | 5.26e-170 | 489 |
| MS.gene88559.t1 | MTR_5g085730 | 50.104 | 483 | 227 | 7 | 6 | 479 | 17 | 494 | 1.70e-168 | 485 |
| MS.gene88559.t1 | MTR_4g074960 | 52.991 | 468 | 206 | 6 | 25 | 481 | 28 | 492 | 7.95e-168 | 487 |
| MS.gene88559.t1 | MTR_5g093590 | 49.795 | 488 | 228 | 8 | 11 | 481 | 13 | 500 | 2.84e-164 | 474 |
| MS.gene88559.t1 | MTR_3g080810 | 47.934 | 484 | 230 | 10 | 12 | 482 | 20 | 494 | 1.69e-146 | 428 |
| MS.gene88559.t1 | MTR_5g010000 | 48.696 | 460 | 226 | 5 | 25 | 481 | 40 | 492 | 3.83e-144 | 422 |
| MS.gene88559.t1 | MTR_5g009970 | 47.391 | 460 | 232 | 5 | 25 | 481 | 41 | 493 | 1.99e-141 | 416 |
| MS.gene88559.t1 | MTR_8g104820 | 47.863 | 468 | 228 | 8 | 25 | 482 | 30 | 491 | 1.97e-140 | 413 |
| MS.gene88559.t1 | MTR_3g117500 | 46.751 | 477 | 232 | 8 | 19 | 482 | 18 | 485 | 5.22e-137 | 404 |
| MS.gene88559.t1 | MTR_3g010330 | 47.558 | 471 | 231 | 9 | 20 | 482 | 19 | 481 | 5.07e-133 | 394 |
| MS.gene88559.t1 | MTR_4g035955 | 45.378 | 476 | 245 | 9 | 11 | 481 | 1 | 466 | 9.03e-132 | 390 |
| MS.gene88559.t1 | MTR_4g035930 | 44.538 | 476 | 250 | 8 | 11 | 481 | 1 | 467 | 1.44e-130 | 387 |
| MS.gene88559.t1 | MTR_1g088190 | 46.996 | 466 | 214 | 9 | 25 | 482 | 39 | 479 | 9.15e-127 | 377 |
| MS.gene88559.t1 | MTR_3g105230 | 44.743 | 447 | 234 | 8 | 25 | 468 | 30 | 466 | 4.22e-126 | 376 |
| MS.gene88559.t1 | MTR_3g023740 | 43.469 | 490 | 259 | 9 | 1 | 482 | 1 | 480 | 1.04e-122 | 367 |
| MS.gene88559.t1 | MTR_4g035975 | 43.400 | 500 | 253 | 13 | 1 | 481 | 1 | 489 | 2.18e-122 | 367 |
| MS.gene88559.t1 | MTR_3g113720 | 41.970 | 467 | 254 | 9 | 26 | 481 | 58 | 518 | 6.82e-121 | 364 |
| MS.gene88559.t1 | MTR_5g009970 | 45.694 | 418 | 217 | 5 | 67 | 481 | 9 | 419 | 2.43e-120 | 359 |
| MS.gene88559.t1 | MTR_8g075990 | 43.162 | 468 | 249 | 9 | 26 | 482 | 64 | 525 | 1.45e-111 | 340 |
| MS.gene88559.t1 | MTR_5g009970 | 44.110 | 399 | 213 | 5 | 86 | 481 | 1 | 392 | 4.66e-108 | 327 |
| MS.gene88559.t1 | MTR_1g037320 | 95.625 | 160 | 7 | 0 | 86 | 245 | 1 | 160 | 5.47e-99 | 299 |
| MS.gene88559.t1 | MTR_1g037320 | 95.968 | 124 | 5 | 0 | 356 | 479 | 166 | 289 | 9.61e-81 | 253 |
| MS.gene88559.t1 | MTR_2g028480 | 39.148 | 493 | 252 | 13 | 25 | 482 | 111 | 590 | 1.66e-87 | 280 |
| MS.gene88559.t1 | MTR_3g090540 | 35.182 | 523 | 282 | 17 | 5 | 481 | 72 | 583 | 1.45e-84 | 272 |
| MS.gene88559.t1 | MTR_3g082440 | 38.398 | 487 | 259 | 16 | 25 | 481 | 116 | 591 | 4.89e-83 | 269 |
| MS.gene88559.t1 | MTR_5g009970 | 45.317 | 331 | 171 | 5 | 154 | 481 | 1 | 324 | 1.18e-80 | 254 |
| MS.gene88559.t1 | MTR_1g088190 | 45.955 | 309 | 136 | 7 | 25 | 326 | 39 | 323 | 2.72e-69 | 225 |
| MS.gene88559.t1 | MTR_7g108925 | 45.570 | 158 | 84 | 2 | 326 | 482 | 43 | 199 | 4.89e-42 | 149 |
| MS.gene88559.t1 | MTR_0393s0050 | 45.890 | 146 | 75 | 3 | 318 | 461 | 13 | 156 | 3.02e-34 | 127 |
| MS.gene88559.t1 | MTR_4g047570 | 60.177 | 113 | 25 | 2 | 268 | 379 | 1 | 94 | 3.34e-33 | 121 |
| MS.gene88559.t1 | MTR_4g128810 | 36.913 | 149 | 88 | 4 | 335 | 481 | 189 | 333 | 3.37e-19 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88559.t1 | AT2G44570 | 59.138 | 487 | 191 | 3 | 4 | 482 | 6 | 492 | 0.0 | 582 |
| MS.gene88559.t1 | AT2G44550 | 58.526 | 475 | 195 | 2 | 8 | 481 | 16 | 489 | 0.0 | 562 |
| MS.gene88559.t1 | AT2G44540 | 57.505 | 473 | 200 | 1 | 8 | 479 | 16 | 488 | 0.0 | 553 |
| MS.gene88559.t1 | AT2G44560 | 58.193 | 476 | 198 | 1 | 8 | 482 | 16 | 491 | 0.0 | 545 |
| MS.gene88559.t1 | AT1G64390 | 53.151 | 476 | 214 | 6 | 14 | 482 | 16 | 489 | 6.06e-179 | 515 |
| MS.gene88559.t1 | AT4G11050 | 53.846 | 468 | 209 | 5 | 21 | 481 | 22 | 489 | 2.97e-174 | 501 |
| MS.gene88559.t1 | AT4G11050 | 53.846 | 468 | 209 | 5 | 21 | 481 | 22 | 489 | 1.09e-173 | 502 |
| MS.gene88559.t1 | AT4G11050 | 53.846 | 468 | 209 | 5 | 21 | 481 | 22 | 489 | 1.17e-173 | 502 |
| MS.gene88559.t1 | AT2G32990 | 50.746 | 469 | 222 | 6 | 20 | 479 | 34 | 502 | 8.51e-164 | 473 |
| MS.gene88559.t1 | AT2G44570 | 56.533 | 398 | 166 | 2 | 4 | 394 | 6 | 403 | 1.64e-154 | 446 |
| MS.gene88559.t1 | AT1G48930 | 50.538 | 465 | 217 | 5 | 25 | 479 | 30 | 491 | 1.84e-149 | 441 |
| MS.gene88559.t1 | AT1G02800 | 49.787 | 470 | 223 | 7 | 19 | 482 | 37 | 499 | 4.47e-145 | 425 |
| MS.gene88559.t1 | AT1G23210 | 48.548 | 482 | 233 | 8 | 10 | 482 | 11 | 486 | 1.98e-142 | 418 |
| MS.gene88559.t1 | AT1G70710 | 46.914 | 486 | 243 | 8 | 6 | 482 | 7 | 486 | 7.77e-140 | 411 |
| MS.gene88559.t1 | AT4G02290 | 48.817 | 465 | 225 | 7 | 25 | 482 | 52 | 510 | 9.77e-140 | 412 |
| MS.gene88559.t1 | AT4G23560 | 45.756 | 483 | 249 | 7 | 3 | 481 | 1 | 474 | 4.65e-136 | 401 |
| MS.gene88559.t1 | AT1G71380 | 47.035 | 489 | 240 | 10 | 3 | 482 | 1 | 479 | 4.11e-135 | 399 |
| MS.gene88559.t1 | AT4G39010 | 46.368 | 468 | 236 | 9 | 25 | 482 | 29 | 491 | 4.22e-132 | 392 |
| MS.gene88559.t1 | AT1G22880 | 46.901 | 484 | 239 | 9 | 7 | 482 | 6 | 479 | 9.51e-132 | 390 |
| MS.gene88559.t1 | AT4G09740 | 44.513 | 483 | 255 | 7 | 3 | 481 | 1 | 474 | 3.39e-131 | 389 |
| MS.gene88559.t1 | AT3G43860 | 45.567 | 485 | 248 | 7 | 5 | 482 | 9 | 484 | 7.13e-131 | 388 |
| MS.gene88559.t1 | AT3G43860 | 45.567 | 485 | 248 | 7 | 5 | 482 | 9 | 484 | 7.13e-131 | 388 |
| MS.gene88559.t1 | AT1G19940 | 45.534 | 459 | 237 | 9 | 25 | 476 | 48 | 500 | 7.06e-127 | 379 |
| MS.gene88559.t1 | AT1G19940 | 45.534 | 459 | 237 | 9 | 25 | 476 | 48 | 500 | 7.06e-127 | 379 |
| MS.gene88559.t1 | AT4G39000 | 45.011 | 471 | 236 | 10 | 25 | 481 | 25 | 486 | 3.58e-116 | 351 |
| MS.gene88559.t1 | AT1G75680 | 44.444 | 450 | 237 | 8 | 26 | 468 | 58 | 501 | 3.44e-115 | 349 |
| MS.gene88559.t1 | AT4G38990 | 44.556 | 496 | 240 | 13 | 7 | 481 | 8 | 489 | 3.57e-115 | 348 |
| MS.gene88559.t1 | AT4G02290 | 45.050 | 404 | 209 | 7 | 86 | 482 | 1 | 398 | 1.73e-104 | 318 |
| MS.gene88559.t1 | AT1G22880 | 44.938 | 405 | 205 | 9 | 86 | 482 | 1 | 395 | 3.51e-101 | 309 |
| MS.gene88559.t1 | AT1G19940 | 45.152 | 361 | 191 | 6 | 25 | 379 | 48 | 407 | 9.94e-95 | 293 |
| MS.gene88559.t1 | AT4G39010 | 43.802 | 363 | 191 | 7 | 25 | 378 | 29 | 387 | 3.36e-94 | 291 |
| MS.gene88559.t1 | AT5G49720 | 36.542 | 509 | 281 | 15 | 7 | 482 | 88 | 587 | 4.69e-82 | 266 |
| MS.gene88559.t1 | AT4G24260 | 36.810 | 489 | 269 | 14 | 25 | 482 | 108 | 587 | 2.93e-80 | 261 |
| MS.gene88559.t1 | AT1G65610 | 36.777 | 484 | 270 | 14 | 25 | 481 | 116 | 590 | 3.14e-80 | 261 |
| MS.gene88559.t1 | AT1G22880 | 47.706 | 327 | 156 | 6 | 7 | 327 | 6 | 323 | 7.47e-80 | 252 |
| MS.gene88559.t1 | AT4G38990 | 44.476 | 353 | 163 | 7 | 7 | 354 | 8 | 332 | 2.18e-77 | 246 |
| MS.gene88559.t1 | AT4G24260 | 35.574 | 357 | 197 | 10 | 25 | 352 | 108 | 460 | 2.47e-48 | 173 |
| MS.gene88559.t1 | AT4G24260 | 35.783 | 313 | 171 | 8 | 25 | 310 | 108 | 417 | 7.83e-47 | 169 |
Find 110 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCATTATCAGCCATAAAA+TGG | 0.173859 | 1.4:-22876025 | MS.gene88559:CDS |
| ACTGCTCCCTCTAATATATT+AGG | 0.190260 | 1.4:+22874139 | None:intergenic |
| ATATTCCAGTAGTGGGTTTA+AGG | 0.201253 | 1.4:-22875551 | MS.gene88559:intron |
| GGGCAGCAGCATGGCTTTAT+AGG | 0.201278 | 1.4:-22875350 | MS.gene88559:CDS |
| TGCTGAAACTGCTGCTGCTT+TGG | 0.209306 | 1.4:-22875841 | MS.gene88559:CDS |
| ACCATGTAACTCATATTTCT+TGG | 0.229577 | 1.4:+22874292 | None:intergenic |
| AATAGGAATGACTTCCAATT+AGG | 0.235836 | 1.4:-22874082 | MS.gene88559:CDS |
| ATGTTGTTCATCAATCTTAT+AGG | 0.263668 | 1.4:+22875881 | None:intergenic |
| TCAATCTTATAGGAATTTCT+AGG | 0.273352 | 1.4:+22875891 | None:intergenic |
| CCCCTCTCCACGTTACTCTT+TGG | 0.303980 | 1.4:+22876814 | None:intergenic |
| ATGATGGGTTTACGGATAAT+AGG | 0.312077 | 1.4:-22874099 | MS.gene88559:CDS |
| ATGAGTTACATGGTGGGATA+TGG | 0.319706 | 1.4:-22874283 | MS.gene88559:CDS |
| CTGCTCCCTCTAATATATTA+GGG | 0.334294 | 1.4:+22874140 | None:intergenic |
| CCCTCTAATATATTAGGGTT+TGG | 0.335942 | 1.4:+22874145 | None:intergenic |
| ACCAAACCCTAATATATTAG+AGG | 0.337833 | 1.4:-22874146 | MS.gene88559:CDS |
| TAGTAGTTGGCTCCCCTAAT+TGG | 0.338232 | 1.4:+22874068 | None:intergenic |
| ACAAACAGGATGAATTACTA+TGG | 0.338358 | 1.4:-22875371 | MS.gene88559:intron |
| AGATCAAAATGATGGGTTTA+CGG | 0.357637 | 1.4:-22874107 | MS.gene88559:CDS |
| AAGAGAAGTCTCCAGAGATT+TGG | 0.359356 | 1.4:-22874702 | MS.gene88559:CDS |
| CACGTTACTCTTTGGTTAGA+AGG | 0.364308 | 1.4:+22876822 | None:intergenic |
| ACTTCTCCATACAAAATGTT+TGG | 0.372887 | 1.4:+22875969 | None:intergenic |
| TTGGAGGTGCAGACGACATT+GGG | 0.375469 | 1.4:-22875296 | MS.gene88559:CDS |
| AATGTTACTTGTGCTGATTA+TGG | 0.377433 | 1.4:-22876900 | MS.gene88559:CDS |
| TGCATTATCAGCCATAAAAT+GGG | 0.387186 | 1.4:-22876024 | MS.gene88559:CDS |
| ATAGGAATGACTTCCAATTA+GGG | 0.388331 | 1.4:-22874081 | MS.gene88559:CDS |
| CTTAAAGATGGCCAAGATGC+TGG | 0.392573 | 1.4:-22876783 | MS.gene88559:CDS |
| TAATGCATTTGTATACTCAT+TGG | 0.395697 | 1.4:+22876040 | None:intergenic |
| AGACAAGTATTTAGAATAAG+TGG | 0.398598 | 1.4:+22874534 | None:intergenic |
| GTGCAAGATCAATGTTTAGT+TGG | 0.403090 | 1.4:-22875272 | MS.gene88559:CDS |
| CAACATTGATGATCTGAATC+AGG | 0.403276 | 1.4:+22875939 | None:intergenic |
| GTTTGTTATGGTTTCAACAA+TGG | 0.414301 | 1.4:-22874597 | MS.gene88559:CDS |
| TTTGTTATGGTTTCAACAAT+GGG | 0.422337 | 1.4:-22874596 | MS.gene88559:CDS |
| TTGTATTGAGTCCAAATCTC+TGG | 0.428483 | 1.4:+22874691 | None:intergenic |
| ACATCTGTTGCACCTTTAGT+TGG | 0.431764 | 1.4:-22874046 | MS.gene88559:CDS |
| GGCAGCAGCATGGCTTTATA+GGG | 0.439461 | 1.4:-22875349 | MS.gene88559:CDS |
| GTGAGTTCAGATCAAAATGA+TGG | 0.443435 | 1.4:-22874115 | MS.gene88559:CDS |
| TGCAAGATCAATGTTTAGTT+GGG | 0.447959 | 1.4:-22875271 | MS.gene88559:CDS |
| TGCATTGCTATCGGAGGGCT+CGG | 0.448179 | 1.4:-22875805 | MS.gene88559:CDS |
| TATCACCTTAAACCCACTAC+TGG | 0.448534 | 1.4:+22875546 | None:intergenic |
| GCTAAATACTATGATTACCT+TGG | 0.461392 | 1.4:-22875315 | MS.gene88559:CDS |
| CACATCTCTTGTTCAAGCTC+AGG | 0.464765 | 1.4:-22874458 | MS.gene88559:intron |
| ATGGAGCACAATAGAGTTCA+AGG | 0.466441 | 1.4:-22876078 | MS.gene88559:CDS |
| CTAGGTGTTGACATATCCTC+TGG | 0.468045 | 1.4:+22875909 | None:intergenic |
| GCTCCATGATAGCATTGTTA+TGG | 0.468136 | 1.4:+22876094 | None:intergenic |
| TGCTTCTCTTGCATTGCTAT+CGG | 0.471475 | 1.4:-22875814 | MS.gene88559:CDS |
| ATACCATCTTGACATGTAAC+TGG | 0.472002 | 1.4:+22874193 | None:intergenic |
| GCAAAAGTATATTCCAGTAG+TGG | 0.472543 | 1.4:-22875559 | MS.gene88559:CDS |
| CTGATTCAGATCATCAATGT+TGG | 0.477129 | 1.4:-22875938 | MS.gene88559:CDS |
| TTACCATAACAATGCTATCA+TGG | 0.480734 | 1.4:-22876097 | MS.gene88559:CDS |
| GCTGGAGACAATTTGAAGTT+GGG | 0.483067 | 1.4:-22876134 | MS.gene88559:CDS |
| CCATACAAAATGTTTGGTTG+TGG | 0.488548 | 1.4:+22875975 | None:intergenic |
| TGCTGGAGACAATTTGAAGT+TGG | 0.491206 | 1.4:-22876135 | MS.gene88559:CDS |
| AGTAATTTACCCCAGCATCT+TGG | 0.495332 | 1.4:+22876772 | None:intergenic |
| TGATTCAGATCATCAATGTT+GGG | 0.495893 | 1.4:-22875937 | MS.gene88559:CDS |
| GCTTTATAGGGCCACAGCCT+TGG | 0.498504 | 1.4:-22875337 | MS.gene88559:CDS |
| TTAAAGATGGCCAAGATGCT+GGG | 0.499862 | 1.4:-22876782 | MS.gene88559:CDS |
| AAATACTATGATTACCTTGG+AGG | 0.502923 | 1.4:-22875312 | MS.gene88559:CDS |
| GTGCACAAATTCTTGTTGCA+AGG | 0.507769 | 1.4:-22875233 | MS.gene88559:CDS |
| ATTGTTATGGTAAATGCCAT+TGG | 0.511245 | 1.4:+22876107 | None:intergenic |
| TTCTCTTGCATTGCTATCGG+AGG | 0.517580 | 1.4:-22875811 | MS.gene88559:CDS |
| ACCAAAGAGTAACGTGGAGA+GGG | 0.526534 | 1.4:-22876815 | MS.gene88559:CDS |
| TGCACAAATTCTTGTTGCAA+GGG | 0.526552 | 1.4:-22875232 | MS.gene88559:intron |
| TTTGAAGTTGGGATTTCCAA+TGG | 0.529343 | 1.4:-22876123 | MS.gene88559:CDS |
| GTGGGTGGATACTATGATGC+TGG | 0.530357 | 1.4:-22876152 | MS.gene88559:CDS |
| CTTGGAGGTGCAGACGACAT+TGG | 0.537805 | 1.4:-22875297 | MS.gene88559:CDS |
| ACAAGAGATGTGAGATCAGA+AGG | 0.540179 | 1.4:+22874469 | None:intergenic |
| TCTCTTGCATTGCTATCGGA+GGG | 0.540594 | 1.4:-22875810 | MS.gene88559:CDS |
| CCGCTGGTGGGATACTATCA+TGG | 0.543615 | 1.4:+22875581 | None:intergenic |
| GGTGCAACAGATGTAGTAGT+TGG | 0.543626 | 1.4:+22874055 | None:intergenic |
| TTCTACTGCTACATTTGCAA+TGG | 0.545999 | 1.4:-22874557 | MS.gene88559:CDS |
| CAAAAGTATATTCCAGTAGT+GGG | 0.550723 | 1.4:-22875558 | MS.gene88559:CDS |
| TGAGTTCAGATCAAAATGAT+GGG | 0.551634 | 1.4:-22874114 | MS.gene88559:CDS |
| AGTTGGGATGACAAGTATGT+TGG | 0.552848 | 1.4:-22875255 | MS.gene88559:CDS |
| AAGATTGATGAACAACATCC+AGG | 0.553837 | 1.4:-22875876 | MS.gene88559:CDS |
| GACTTTGCAAACAATTCTAG+AGG | 0.562419 | 1.4:-22875610 | MS.gene88559:CDS |
| GGGGATTCCGCACTTAAAGA+TGG | 0.563412 | 1.4:-22876795 | MS.gene88559:CDS |
| CATCATAGTATCCACCCACT+AGG | 0.575641 | 1.4:+22876156 | None:intergenic |
| CCTCTATGATGAATTTGTTG+TGG | 0.577152 | 1.4:+22874250 | None:intergenic |
| TAAGCAAGAACACCAACTAA+AGG | 0.577826 | 1.4:+22874034 | None:intergenic |
| ATCAATTGTATCAATCAAAG+AGG | 0.579306 | 1.4:-22874224 | MS.gene88559:CDS |
| CCACAACAAATTCATCATAG+AGG | 0.584665 | 1.4:-22874250 | MS.gene88559:CDS |
| CCAAACCCTAATATATTAGA+GGG | 0.586749 | 1.4:-22874145 | MS.gene88559:CDS |
| CAAACAGGATGAATTACTAT+GGG | 0.588140 | 1.4:-22875370 | MS.gene88559:intron |
| GCACCAGTTACATGTCAAGA+TGG | 0.588578 | 1.4:-22874196 | MS.gene88559:CDS |
| TCCAAGAAATATGAGTTACA+TGG | 0.588608 | 1.4:-22874293 | MS.gene88559:CDS |
| AATTACTATGGGCAGCAGCA+TGG | 0.593166 | 1.4:-22875359 | MS.gene88559:CDS |
| CAATGTCGTCTGCACCTCCA+AGG | 0.603267 | 1.4:+22875298 | None:intergenic |
| ATGTGTGTAGGTTGACCTAG+TGG | 0.606349 | 1.4:-22876171 | MS.gene88559:intron |
| GCAACCCTAAAATGCAGTGA+AGG | 0.610025 | 1.4:-22874502 | MS.gene88559:CDS |
| AAGAAATATGAGTTACATGG+TGG | 0.612793 | 1.4:-22874290 | MS.gene88559:CDS |
| AACCAAAGAGTAACGTGGAG+AGG | 0.613604 | 1.4:-22876816 | MS.gene88559:CDS |
| GGAGGTGCAGACGACATTGG+GGG | 0.625200 | 1.4:-22875294 | MS.gene88559:CDS |
| ATAGTATTTAGCCAAGGCTG+TGG | 0.626527 | 1.4:+22875326 | None:intergenic |
| ATCTTGGCCATCTTTAAGTG+CGG | 0.633085 | 1.4:+22876788 | None:intergenic |
| TAAAGATGGCCAAGATGCTG+GGG | 0.633585 | 1.4:-22876781 | MS.gene88559:intron |
| TGGAGGTGCAGACGACATTG+GGG | 0.638482 | 1.4:-22875295 | MS.gene88559:CDS |
| TGTGTGTAGGTTGACCTAGT+GGG | 0.643672 | 1.4:-22876170 | MS.gene88559:intron |
| AGAAATATGAGTTACATGGT+GGG | 0.646567 | 1.4:-22874289 | MS.gene88559:CDS |
| CCAAAGAGTAACGTGGAGAG+GGG | 0.652369 | 1.4:-22876814 | MS.gene88559:CDS |
| TCAGCAGCAAGATCAGTACC+TGG | 0.654627 | 1.4:+22875858 | None:intergenic |
| GTAATCATAGTATTTAGCCA+AGG | 0.655522 | 1.4:+22875320 | None:intergenic |
| GCATTATCAGCCATAAAATG+GGG | 0.676447 | 1.4:-22876023 | MS.gene88559:CDS |
| TAGGAATGACTTCCAATTAG+GGG | 0.677773 | 1.4:-22874080 | MS.gene88559:CDS |
| TCAATGTTGGGAAAGACCAG+AGG | 0.695405 | 1.4:-22875925 | MS.gene88559:CDS |
| CCATGATAGTATCCCACCAG+CGG | 0.703839 | 1.4:-22875581 | MS.gene88559:CDS |
| AAAATGTAGAGAAAACACCA+GGG | 0.709718 | 1.4:-22874621 | MS.gene88559:CDS |
| CTTCTAACCAAAGAGTAACG+TGG | 0.710632 | 1.4:-22876821 | MS.gene88559:CDS |
| GTGTAGGTTGACCTAGTGGG+TGG | 0.723623 | 1.4:-22876167 | MS.gene88559:intron |
| AAATGTAGAGAAAACACCAG+GGG | 0.725580 | 1.4:-22874620 | MS.gene88559:CDS |
| AATGTAGAGAAAACACCAGG+GGG | 0.737420 | 1.4:-22874619 | MS.gene88559:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAATAATATATTCATTTA+GGG | - | chr1.4:22876173-22876192 | MS.gene88559:intron | 10.0% |
| !! | TAAAATGTTATGAAAAAAAA+GGG | + | chr1.4:22876644-22876663 | None:intergenic | 10.0% |
| !! | TAGAAATAATATATTCATTT+AGG | - | chr1.4:22876172-22876191 | MS.gene88559:intron | 10.0% |
| !!! | AAAAAAACCAAAATATTTTA+AGG | + | chr1.4:22876045-22876064 | None:intergenic | 10.0% |
| !!! | AAAAAACCAAAATATTTTAA+GGG | + | chr1.4:22876044-22876063 | None:intergenic | 10.0% |
| !!! | ATTAATTTTTTTAGTAATTG+TGG | + | chr1.4:22875557-22875576 | None:intergenic | 10.0% |
| !!! | GTTTATAATTTTTTCTTTTT+TGG | - | chr1.4:22875312-22875331 | MS.gene88559:CDS | 10.0% |
| !!! | TATAAATTTTCCATTATATT+GGG | - | chr1.4:22876232-22876251 | MS.gene88559:intron | 10.0% |
| !!! | TTATAAATTTTCCATTATAT+TGG | - | chr1.4:22876231-22876250 | MS.gene88559:intron | 10.0% |
| !!! | TTTAATTTATACATTTAACT+TGG | + | chr1.4:22876553-22876572 | None:intergenic | 10.0% |
| !!! | TTTTTTTAAAGAAATTTACA+AGG | - | chr1.4:22876109-22876128 | MS.gene88559:CDS | 10.0% |
| !! | ATTTATACATACATGAAAAT+TGG | - | chr1.4:22875575-22875594 | MS.gene88559:CDS | 15.0% |
| !! | CAATATACTAAAAAAAATGA+AGG | - | chr1.4:22875482-22875501 | MS.gene88559:intron | 15.0% |
| !! | CTAAAATGTTATGAAAAAAA+AGG | + | chr1.4:22876645-22876664 | None:intergenic | 15.0% |
| !! | TTTATACATACATGAAAATT+GGG | - | chr1.4:22875576-22875595 | MS.gene88559:CDS | 15.0% |
| !!! | CTTTTTTTTCATAACATTTT+AGG | - | chr1.4:22876643-22876662 | MS.gene88559:intron | 15.0% |
| !!! | GTTGCTATATATAATATTTT+TGG | - | chr1.4:22874508-22874527 | MS.gene88559:CDS | 15.0% |
| !!! | TGTTGACTAAAAATTTATAA+AGG | + | chr1.4:22874677-22874696 | None:intergenic | 15.0% |
| !!! | TGTTTTAGTAAATTATAAGT+GGG | + | chr1.4:22874353-22874372 | None:intergenic | 15.0% |
| !!! | TTTTGGATTAATTAAGTATA+TGG | - | chr1.4:22874525-22874544 | MS.gene88559:CDS | 15.0% |
| !! | AAACATTCTTACAAATGTTT+CGG | + | chr1.4:22874432-22874451 | None:intergenic | 20.0% |
| !! | AAAGGAACTATAAATATTGA+TGG | + | chr1.4:22874659-22874678 | None:intergenic | 20.0% |
| !! | ACAATGTTATGCTATATATA+TGG | + | chr1.4:22875799-22875818 | None:intergenic | 20.0% |
| !! | ATATTTGATTGTTTGTCAAA+AGG | + | chr1.4:22876612-22876631 | None:intergenic | 20.0% |
| !! | ATGTTTGTAAGAATGTTATA+TGG | - | chr1.4:22874387-22874406 | MS.gene88559:intron | 20.0% |
| !! | CTCTTGAAACAAAAATATAA+AGG | + | chr1.4:22875828-22875847 | None:intergenic | 20.0% |
| !! | TATAAAGAGAAATATTGTCT+TGG | + | chr1.4:22875982-22876001 | None:intergenic | 20.0% |
| !! | TCAAGAGCTAATTAAAATAT+GGG | - | chr1.4:22875841-22875860 | MS.gene88559:CDS | 20.0% |
| !! | TTCAAGAGCTAATTAAAATA+TGG | - | chr1.4:22875840-22875859 | MS.gene88559:CDS | 20.0% |
| !!! | AAAAAGTTTGTTGTTTTTTG+AGG | - | chr1.4:22874116-22874135 | MS.gene88559:CDS | 20.0% |
| !!! | AAAAGTATGATTTTGTTTTG+TGG | - | chr1.4:22874740-22874759 | MS.gene88559:intron | 20.0% |
| !!! | AAAAGTTTGTTGTTTTTTGA+GGG | - | chr1.4:22874117-22874136 | MS.gene88559:CDS | 20.0% |
| !!! | AAAGTATGATTTTGTTTTGT+GGG | - | chr1.4:22874741-22874760 | MS.gene88559:intron | 20.0% |
| !!! | AATATTGATGGAACATTTTA+CGG | + | chr1.4:22874647-22874666 | None:intergenic | 20.0% |
| !!! | ACATTTCCCTTAAAATATTT+TGG | - | chr1.4:22876035-22876054 | MS.gene88559:CDS | 20.0% |
| !!! | ACATTTTCCTTTACATTTAT+AGG | + | chr1.4:22874709-22874728 | None:intergenic | 20.0% |
| !!! | CATTTTCCTTTACATTTATA+GGG | + | chr1.4:22874708-22874727 | None:intergenic | 20.0% |
| !!! | GCATTTTCATTATAAAATGA+AGG | + | chr1.4:22874257-22874276 | None:intergenic | 20.0% |
| !!! | GTGTTTTAGTAAATTATAAG+TGG | + | chr1.4:22874354-22874373 | None:intergenic | 20.0% |
| !!! | TTTTTTCATAACATTTTAGG+TGG | - | chr1.4:22876646-22876665 | MS.gene88559:intron | 20.0% |
| !!! | TTTTTTCCCTATAAATGTAA+AGG | - | chr1.4:22874699-22874718 | MS.gene88559:CDS | 20.0% |
| ! | AAGAATGTTATATGGTTAGA+AGG | - | chr1.4:22874395-22874414 | MS.gene88559:intron | 25.0% |
| ! | ACATTTGTAAGAATGTTTGT+TGG | - | chr1.4:22874434-22874453 | MS.gene88559:intron | 25.0% |
| ! | ACTAAAAAAAATGAAGGAAG+TGG | - | chr1.4:22875488-22875507 | MS.gene88559:intron | 25.0% |
| ! | ATCAATTGTATCAATCAAAG+AGG | - | chr1.4:22876757-22876776 | MS.gene88559:intron | 25.0% |
| ! | ATGTTGTTCATCAATCTTAT+AGG | + | chr1.4:22875103-22875122 | None:intergenic | 25.0% |
| ! | CATTTGTAAGAATGTTTGTT+GGG | - | chr1.4:22874435-22874454 | MS.gene88559:intron | 25.0% |
| ! | TAAAATGAAGGAGAATTCAA+AGG | + | chr1.4:22874245-22874264 | None:intergenic | 25.0% |
| ! | TAACTTTCTTATATGTGTGT+AGG | - | chr1.4:22874798-22874817 | MS.gene88559:intron | 25.0% |
| ! | TAATGCATTTGTATACTCAT+TGG | + | chr1.4:22874944-22874963 | None:intergenic | 25.0% |
| ! | TCAATCTTATAGGAATTTCT+AGG | + | chr1.4:22875093-22875112 | None:intergenic | 25.0% |
| !! | AGACAAGTATTTAGAATAAG+TGG | + | chr1.4:22876450-22876469 | None:intergenic | 25.0% |
| !! | ATATTGATGGAACATTTTAC+GGG | + | chr1.4:22874646-22874665 | None:intergenic | 25.0% |
| !! | TTTGTTATGGTTTCAACAAT+GGG | - | chr1.4:22876385-22876404 | MS.gene88559:intron | 25.0% |
| !!! | AAGTATGATTTTGTTTTGTG+GGG | - | chr1.4:22874742-22874761 | MS.gene88559:intron | 25.0% |
| AAAAATGTAGAGAAAACACC+AGG | - | chr1.4:22876359-22876378 | MS.gene88559:intron | 30.0% | |
| AAAATGTAGAGAAAACACCA+GGG | - | chr1.4:22876360-22876379 | MS.gene88559:intron | 30.0% | |
| AAATACTATGATTACCTTGG+AGG | - | chr1.4:22875669-22875688 | MS.gene88559:intron | 30.0% | |
| AAGAAATATGAGTTACATGG+TGG | - | chr1.4:22876691-22876710 | MS.gene88559:intron | 30.0% | |
| AATAGGAATGACTTCCAATT+AGG | - | chr1.4:22876899-22876918 | MS.gene88559:CDS | 30.0% | |
| ACAAACAGGATGAATTACTA+TGG | - | chr1.4:22875610-22875629 | MS.gene88559:CDS | 30.0% | |
| ACCAAACCCTAATATATTAG+AGG | - | chr1.4:22876835-22876854 | MS.gene88559:CDS | 30.0% | |
| ACCATGTAACTCATATTTCT+TGG | + | chr1.4:22876692-22876711 | None:intergenic | 30.0% | |
| ACTTCTCCATACAAAATGTT+TGG | + | chr1.4:22875015-22875034 | None:intergenic | 30.0% | |
| AGAAATATGAGTTACATGGT+GGG | - | chr1.4:22876692-22876711 | MS.gene88559:intron | 30.0% | |
| ATAGGAATGACTTCCAATTA+GGG | - | chr1.4:22876900-22876919 | MS.gene88559:CDS | 30.0% | |
| ATGCATTATCAGCCATAAAA+TGG | - | chr1.4:22874956-22874975 | MS.gene88559:intron | 30.0% | |
| ATTGTTATGGTAAATGCCAT+TGG | + | chr1.4:22874877-22874896 | None:intergenic | 30.0% | |
| CAAACAGGATGAATTACTAT+GGG | - | chr1.4:22875611-22875630 | MS.gene88559:CDS | 30.0% | |
| CCAAACCCTAATATATTAGA+GGG | - | chr1.4:22876836-22876855 | MS.gene88559:CDS | 30.0% | |
| GAATCAGAGAAAAACAACAA+AGG | + | chr1.4:22874059-22874078 | None:intergenic | 30.0% | |
| GCTAAATACTATGATTACCT+TGG | - | chr1.4:22875666-22875685 | MS.gene88559:intron | 30.0% | |
| GGGAATTTATTTGTACAAAC+AGG | - | chr1.4:22875596-22875615 | MS.gene88559:CDS | 30.0% | |
| GTAATCATAGTATTTAGCCA+AGG | + | chr1.4:22875664-22875683 | None:intergenic | 30.0% | |
| GTCAAGATGGTATTCAAAAA+TGG | - | chr1.4:22876798-22876817 | MS.gene88559:CDS | 30.0% | |
| TACAAACATCTCAGTCAAAA+AGG | + | chr1.4:22874376-22874395 | None:intergenic | 30.0% | |
| TAGAGAACATTTATTTGCCA+TGG | - | chr1.4:22875515-22875534 | MS.gene88559:intron | 30.0% | |
| TCCAAGAAATATGAGTTACA+TGG | - | chr1.4:22876688-22876707 | MS.gene88559:intron | 30.0% | |
| TGAGTTCAGATCAAAATGAT+GGG | - | chr1.4:22876867-22876886 | MS.gene88559:CDS | 30.0% | |
| TGATTCAGATCATCAATGTT+GGG | - | chr1.4:22875044-22875063 | MS.gene88559:intron | 30.0% | |
| TGCAAGATCAATGTTTAGTT+GGG | - | chr1.4:22875710-22875729 | MS.gene88559:intron | 30.0% | |
| TGCATTATCAGCCATAAAAT+GGG | - | chr1.4:22874957-22874976 | MS.gene88559:intron | 30.0% | |
| TTACCATAACAATGCTATCA+TGG | - | chr1.4:22874884-22874903 | MS.gene88559:intron | 30.0% | |
| ! | AACATTTTGTATGGAGAAGT+TGG | - | chr1.4:22875015-22875034 | MS.gene88559:intron | 30.0% |
| ! | ACTTGCACCTTAATGTTTTT+AGG | + | chr1.4:22874318-22874337 | None:intergenic | 30.0% |
| ! | CAAAAGTATATTCCAGTAGT+GGG | - | chr1.4:22875423-22875442 | MS.gene88559:intron | 30.0% |
| ! | TGGTGTTTTCTCTACATTTT+TGG | + | chr1.4:22876360-22876379 | None:intergenic | 30.0% |
| !! | AATGTTACTTGTGCTGATTA+TGG | - | chr1.4:22874081-22874100 | MS.gene88559:CDS | 30.0% |
| !! | AGATCAAAATGATGGGTTTA+CGG | - | chr1.4:22876874-22876893 | MS.gene88559:CDS | 30.0% |
| !! | GTTTGTTATGGTTTCAACAA+TGG | - | chr1.4:22876384-22876403 | MS.gene88559:intron | 30.0% |
| !!! | ATTTTAGGTGGACTATATCT+TGG | - | chr1.4:22876658-22876677 | MS.gene88559:intron | 30.0% |
| !!! | TTTTAGGTGGACTATATCTT+GGG | - | chr1.4:22876659-22876678 | MS.gene88559:intron | 30.0% |
| AAATGTAGAGAAAACACCAG+GGG | - | chr1.4:22876361-22876380 | MS.gene88559:intron | 35.0% | |
| AAGATTGATGAACAACATCC+AGG | - | chr1.4:22875105-22875124 | MS.gene88559:intron | 35.0% | |
| ACACCCACCTAAAAACATTA+AGG | - | chr1.4:22874308-22874327 | MS.gene88559:CDS | 35.0% | |
| ACTGCTCCCTCTAATATATT+AGG | + | chr1.4:22876845-22876864 | None:intergenic | 35.0% | |
| ATACCATCTTGACATGTAAC+TGG | + | chr1.4:22876791-22876810 | None:intergenic | 35.0% | |
| CCACAACAAATTCATCATAG+AGG | - | chr1.4:22876731-22876750 | MS.gene88559:intron | 35.0% | |
| CCATACAAAATGTTTGGTTG+TGG | + | chr1.4:22875009-22875028 | None:intergenic | 35.0% | |
| CCCTCTAATATATTAGGGTT+TGG | + | chr1.4:22876839-22876858 | None:intergenic | 35.0% | |
| CTGATTCAGATCATCAATGT+TGG | - | chr1.4:22875043-22875062 | MS.gene88559:intron | 35.0% | |
| CTGCTCCCTCTAATATATTA+GGG | + | chr1.4:22876844-22876863 | None:intergenic | 35.0% | |
| GACTTTGCAAACAATTCTAG+AGG | - | chr1.4:22875371-22875390 | MS.gene88559:intron | 35.0% | |
| GCATTATCAGCCATAAAATG+GGG | - | chr1.4:22874958-22874977 | MS.gene88559:intron | 35.0% | |
| GTGAGTTCAGATCAAAATGA+TGG | - | chr1.4:22876866-22876885 | MS.gene88559:CDS | 35.0% | |
| GTGCAAGATCAATGTTTAGT+TGG | - | chr1.4:22875709-22875728 | MS.gene88559:intron | 35.0% | |
| TAAGCAAGAACACCAACTAA+AGG | + | chr1.4:22876950-22876969 | None:intergenic | 35.0% | |
| TAGGAATGACTTCCAATTAG+GGG | - | chr1.4:22876901-22876920 | MS.gene88559:CDS | 35.0% | |
| TGCACAAATTCTTGTTGCAA+GGG | - | chr1.4:22875749-22875768 | MS.gene88559:intron | 35.0% | |
| TTCTACTGCTACATTTGCAA+TGG | - | chr1.4:22876424-22876443 | MS.gene88559:intron | 35.0% | |
| TTGTATTGAGTCCAAATCTC+TGG | + | chr1.4:22876293-22876312 | None:intergenic | 35.0% | |
| ! | ATCACCTTCACTGCATTTTA+GGG | + | chr1.4:22876486-22876505 | None:intergenic | 35.0% |
| ! | CAACATTGATGATCTGAATC+AGG | + | chr1.4:22875045-22875064 | None:intergenic | 35.0% |
| ! | CCACAACCAAACATTTTGTA+TGG | - | chr1.4:22875006-22875025 | MS.gene88559:intron | 35.0% |
| ! | CTGAAGGAGAGAATTTTACA+AGG | + | chr1.4:22874612-22874631 | None:intergenic | 35.0% |
| ! | GCAAAAGTATATTCCAGTAG+TGG | - | chr1.4:22875422-22875441 | MS.gene88559:intron | 35.0% |
| ! | TTTGAAGTTGGGATTTCCAA+TGG | - | chr1.4:22874858-22874877 | MS.gene88559:intron | 35.0% |
| !! | ATATTCCAGTAGTGGGTTTA+AGG | - | chr1.4:22875430-22875449 | MS.gene88559:intron | 35.0% |
| !! | ATGATGGGTTTACGGATAAT+AGG | - | chr1.4:22876882-22876901 | MS.gene88559:CDS | 35.0% |
| !! | CCTCTATGATGAATTTGTTG+TGG | + | chr1.4:22876734-22876753 | None:intergenic | 35.0% |
| !!! | GCACCTTAATGTTTTTAGGT+GGG | + | chr1.4:22874314-22874333 | None:intergenic | 35.0% |
| !!! | TGCACCTTAATGTTTTTAGG+TGG | + | chr1.4:22874315-22874334 | None:intergenic | 35.0% |
| AACTGCATGGCCCAATATAA+TGG | + | chr1.4:22876245-22876264 | None:intergenic | 40.0% | |
| AAGAGAAGTCTCCAGAGATT+TGG | - | chr1.4:22876279-22876298 | MS.gene88559:intron | 40.0% | |
| AATGTAGAGAAAACACCAGG+GGG | - | chr1.4:22876362-22876381 | MS.gene88559:intron | 40.0% | |
| ACAAGAGATGTGAGATCAGA+AGG | + | chr1.4:22876515-22876534 | None:intergenic | 40.0% | |
| ACATCTGTTGCACCTTTAGT+TGG | - | chr1.4:22876935-22876954 | MS.gene88559:CDS | 40.0% | |
| ACGGGAACTAAAAATGCTGA+AGG | + | chr1.4:22874628-22874647 | None:intergenic | 40.0% | |
| AGTAATTTACCCCAGCATCT+TGG | + | chr1.4:22874212-22874231 | None:intergenic | 40.0% | |
| AGTTGGGATGACAAGTATGT+TGG | - | chr1.4:22875726-22875745 | MS.gene88559:intron | 40.0% | |
| ATAGTATTTAGCCAAGGCTG+TGG | + | chr1.4:22875658-22875677 | None:intergenic | 40.0% | |
| ATCTTGGCCATCTTTAAGTG+CGG | + | chr1.4:22874196-22874215 | None:intergenic | 40.0% | |
| ATGGAGCACAATAGAGTTCA+AGG | - | chr1.4:22874903-22874922 | MS.gene88559:intron | 40.0% | |
| CACGTTACTCTTTGGTTAGA+AGG | + | chr1.4:22874162-22874181 | None:intergenic | 40.0% | |
| CCAACCTAAAACAAACTGCA+TGG | + | chr1.4:22876258-22876277 | None:intergenic | 40.0% | |
| CTTCTAACCAAAGAGTAACG+TGG | - | chr1.4:22874160-22874179 | MS.gene88559:CDS | 40.0% | |
| GCAATCATGCAAAGCAAGTA+TGG | - | chr1.4:22875217-22875236 | MS.gene88559:intron | 40.0% | |
| GCTCCATGATAGCATTGTTA+TGG | + | chr1.4:22874890-22874909 | None:intergenic | 40.0% | |
| GTGCACAAATTCTTGTTGCA+AGG | - | chr1.4:22875748-22875767 | MS.gene88559:intron | 40.0% | |
| TAATTCCTTAACCAATGCCC+CGG | - | chr1.4:22876000-22876019 | MS.gene88559:CDS | 40.0% | |
| TATCACCTTAAACCCACTAC+TGG | + | chr1.4:22875438-22875457 | None:intergenic | 40.0% | |
| TGCTTCTCTTGCATTGCTAT+CGG | - | chr1.4:22875167-22875186 | MS.gene88559:intron | 40.0% | |
| TTAAAGATGGCCAAGATGCT+GGG | - | chr1.4:22874199-22874218 | MS.gene88559:CDS | 40.0% | |
| TTTGCCATGGCTACAATGAT+TGG | - | chr1.4:22875528-22875547 | MS.gene88559:intron | 40.0% | |
| ! | AATATACTTTTGCCGCTGGT+GGG | + | chr1.4:22875415-22875434 | None:intergenic | 40.0% |
| ! | ATGAGTTACATGGTGGGATA+TGG | - | chr1.4:22876698-22876717 | MS.gene88559:intron | 40.0% |
| ! | CATCACCTTCACTGCATTTT+AGG | + | chr1.4:22876487-22876506 | None:intergenic | 40.0% |
| ! | GCTGGAGACAATTTGAAGTT+GGG | - | chr1.4:22874847-22874866 | MS.gene88559:intron | 40.0% |
| ! | GTAATCTGCTCCCCATTTTA+TGG | + | chr1.4:22874971-22874990 | None:intergenic | 40.0% |
| ! | TGCTGGAGACAATTTGAAGT+TGG | - | chr1.4:22874846-22874865 | MS.gene88559:intron | 40.0% |
| !!! | CCATGCAGTTTGTTTTAGGT+TGG | - | chr1.4:22876255-22876274 | MS.gene88559:intron | 40.0% |
| !!! | TTTTTTGAGGGACAACGTTC+AGG | - | chr1.4:22874129-22874148 | MS.gene88559:CDS | 40.0% |
| AACCAAAGAGTAACGTGGAG+AGG | - | chr1.4:22874165-22874184 | MS.gene88559:CDS | 45.0% | |
| AATTACTATGGGCAGCAGCA+TGG | - | chr1.4:22875622-22875641 | MS.gene88559:intron | 45.0% | |
| AATTCCTTAACCAATGCCCC+GGG | - | chr1.4:22876001-22876020 | MS.gene88559:CDS | 45.0% | |
| ACCAAAGAGTAACGTGGAGA+GGG | - | chr1.4:22874166-22874185 | MS.gene88559:CDS | 45.0% | |
| CACATCTCTTGTTCAAGCTC+AGG | - | chr1.4:22876523-22876542 | MS.gene88559:intron | 45.0% | |
| CATCATAGTATCCACCCACT+AGG | + | chr1.4:22874828-22874847 | None:intergenic | 45.0% | |
| CTTAAAGATGGCCAAGATGC+TGG | - | chr1.4:22874198-22874217 | MS.gene88559:CDS | 45.0% | |
| GCAACCCTAAAATGCAGTGA+AGG | - | chr1.4:22876479-22876498 | MS.gene88559:intron | 45.0% | |
| GCACCAGTTACATGTCAAGA+TGG | - | chr1.4:22876785-22876804 | MS.gene88559:CDS | 45.0% | |
| GGTGCAACAGATGTAGTAGT+TGG | + | chr1.4:22876929-22876948 | None:intergenic | 45.0% | |
| GTTGCCAATCATTGTAGCCA+TGG | + | chr1.4:22875535-22875554 | None:intergenic | 45.0% | |
| TAAAGATGGCCAAGATGCTG+GGG | - | chr1.4:22874200-22874219 | MS.gene88559:CDS | 45.0% | |
| TCAATGTTGGGAAAGACCAG+AGG | - | chr1.4:22875056-22875075 | MS.gene88559:intron | 45.0% | |
| TCTCTTGCATTGCTATCGGA+GGG | - | chr1.4:22875171-22875190 | MS.gene88559:intron | 45.0% | |
| TCTTGTTAACCAGTACCTCC+GGG | - | chr1.4:22875864-22875883 | MS.gene88559:CDS | 45.0% | |
| TGAAACCATAACAAACCCCC+TGG | + | chr1.4:22876380-22876399 | None:intergenic | 45.0% | |
| TTCTCTTGCATTGCTATCGG+AGG | - | chr1.4:22875170-22875189 | MS.gene88559:intron | 45.0% | |
| ! | ATGTGTGTAGGTTGACCTAG+TGG | - | chr1.4:22874810-22874829 | MS.gene88559:intron | 45.0% |
| ! | CTGGAATATACTTTTGCCGC+TGG | + | chr1.4:22875419-22875438 | None:intergenic | 45.0% |
| ! | GAATATACTTTTGCCGCTGG+TGG | + | chr1.4:22875416-22875435 | None:intergenic | 45.0% |
| ! | GTCTTGTTAACCAGTACCTC+CGG | - | chr1.4:22875863-22875882 | MS.gene88559:CDS | 45.0% |
| ! | TAGTAGTTGGCTCCCCTAAT+TGG | + | chr1.4:22876916-22876935 | None:intergenic | 45.0% |
| ! | TGTGTGTAGGTTGACCTAGT+GGG | - | chr1.4:22874811-22874830 | MS.gene88559:intron | 45.0% |
| !! | AAACACCAGGGGGTTTGTTA+TGG | - | chr1.4:22876372-22876391 | MS.gene88559:intron | 45.0% |
| !! | CTAGGTGTTGACATATCCTC+TGG | + | chr1.4:22875075-22875094 | None:intergenic | 45.0% |
| !! | TGGGCCATGCAGTTTGTTTT+AGG | - | chr1.4:22876251-22876270 | MS.gene88559:intron | 45.0% |
| ATTCCTTAACCAATGCCCCG+GGG | - | chr1.4:22876002-22876021 | MS.gene88559:CDS | 50.0% | |
| CCAAAGAGTAACGTGGAGAG+GGG | - | chr1.4:22874167-22874186 | MS.gene88559:CDS | 50.0% | |
| CCATGATAGTATCCCACCAG+CGG | - | chr1.4:22875400-22875419 | MS.gene88559:intron | 50.0% | |
| CTTGTTAACCAGTACCTCCG+GGG | - | chr1.4:22875865-22875884 | MS.gene88559:CDS | 50.0% | |
| GGGGATTCCGCACTTAAAGA+TGG | - | chr1.4:22874186-22874205 | MS.gene88559:CDS | 50.0% | |
| GTGGGTGGATACTATGATGC+TGG | - | chr1.4:22874829-22874848 | MS.gene88559:intron | 50.0% | |
| TAGTCCCTTAACTAGTGCCC+CGG | + | chr1.4:22875885-22875904 | None:intergenic | 50.0% | |
| TCAGCAGCAAGATCAGTACC+TGG | + | chr1.4:22875126-22875145 | None:intergenic | 50.0% | |
| ! | TGCTGAAACTGCTGCTGCTT+TGG | - | chr1.4:22875140-22875159 | MS.gene88559:intron | 50.0% |
| ! | TTGGAGGTGCAGACGACATT+GGG | - | chr1.4:22875685-22875704 | MS.gene88559:intron | 50.0% |
| !! | GGCAGCAGCATGGCTTTATA+GGG | - | chr1.4:22875632-22875651 | MS.gene88559:intron | 50.0% |
| AAATGTTAGCCAGTGCCCCC+GGG | + | chr1.4:22876021-22876040 | None:intergenic | 55.0% | |
| CAATGTCGTCTGCACCTCCA+AGG | + | chr1.4:22875686-22875705 | None:intergenic | 55.0% | |
| CCCCTCTCCACGTTACTCTT+TGG | + | chr1.4:22874170-22874189 | None:intergenic | 55.0% | |
| CCGCTGGTGGGATACTATCA+TGG | + | chr1.4:22875403-22875422 | None:intergenic | 55.0% | |
| GAAATGTTAGCCAGTGCCCC+CGG | + | chr1.4:22876022-22876041 | None:intergenic | 55.0% | |
| GCTTTATAGGGCCACAGCCT+TGG | - | chr1.4:22875644-22875663 | MS.gene88559:intron | 55.0% | |
| TGCATTGCTATCGGAGGGCT+CGG | - | chr1.4:22875176-22875195 | MS.gene88559:intron | 55.0% | |
| TTCCTTAACCAATGCCCCGG+GGG | - | chr1.4:22876003-22876022 | MS.gene88559:CDS | 55.0% | |
| ! | ACCTCCGGGGCACTAGTTAA+GGG | - | chr1.4:22875878-22875897 | MS.gene88559:CDS | 55.0% |
| ! | CTTGGAGGTGCAGACGACAT+TGG | - | chr1.4:22875684-22875703 | MS.gene88559:intron | 55.0% |
| ! | GTGTAGGTTGACCTAGTGGG+TGG | - | chr1.4:22874814-22874833 | MS.gene88559:intron | 55.0% |
| ! | TACCTCCGGGGCACTAGTTA+AGG | - | chr1.4:22875877-22875896 | MS.gene88559:CDS | 55.0% |
| ! | TGGAGGTGCAGACGACATTG+GGG | - | chr1.4:22875686-22875705 | MS.gene88559:intron | 55.0% |
| !! | GGGCAGCAGCATGGCTTTAT+AGG | - | chr1.4:22875631-22875650 | MS.gene88559:intron | 55.0% |
| AATGTTAGCCAGTGCCCCCG+GGG | + | chr1.4:22876020-22876039 | None:intergenic | 60.0% | |
| TCCCTTAACTAGTGCCCCGG+AGG | + | chr1.4:22875882-22875901 | None:intergenic | 60.0% | |
| ! | AACTAGTGCCCCGGAGGTAC+TGG | + | chr1.4:22875876-22875895 | None:intergenic | 60.0% |
| ! | GGAGGTGCAGACGACATTGG+GGG | - | chr1.4:22875687-22875706 | MS.gene88559:intron | 60.0% |
| !! | TGCCCCCGGGGCATTGGTTA+AGG | + | chr1.4:22876008-22876027 | None:intergenic | 65.0% |
| ! | AACCAATGCCCCGGGGGCAC+TGG | - | chr1.4:22876009-22876028 | MS.gene88559:CDS | 70.0% |
| AGCCAGTGCCCCCGGGGCAT+TGG | + | chr1.4:22876014-22876033 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 22874024 | 22876979 | 22874024 | ID=MS.gene88559 |
| chr1.4 | mRNA | 22874024 | 22876979 | 22874024 | ID=MS.gene88559.t1;Parent=MS.gene88559 |
| chr1.4 | exon | 22876782 | 22876979 | 22876782 | ID=MS.gene88559.t1.exon1;Parent=MS.gene88559.t1 |
| chr1.4 | CDS | 22876782 | 22876979 | 22876782 | ID=cds.MS.gene88559.t1;Parent=MS.gene88559.t1 |
| chr1.4 | exon | 22875770 | 22876183 | 22875770 | ID=MS.gene88559.t1.exon2;Parent=MS.gene88559.t1 |
| chr1.4 | CDS | 22875770 | 22876183 | 22875770 | ID=cds.MS.gene88559.t1;Parent=MS.gene88559.t1 |
| chr1.4 | exon | 22875552 | 22875638 | 22875552 | ID=MS.gene88559.t1.exon3;Parent=MS.gene88559.t1 |
| chr1.4 | CDS | 22875552 | 22875638 | 22875552 | ID=cds.MS.gene88559.t1;Parent=MS.gene88559.t1 |
| chr1.4 | exon | 22875233 | 22875385 | 22875233 | ID=MS.gene88559.t1.exon4;Parent=MS.gene88559.t1 |
| chr1.4 | CDS | 22875233 | 22875385 | 22875233 | ID=cds.MS.gene88559.t1;Parent=MS.gene88559.t1 |
| chr1.4 | exon | 22874459 | 22874740 | 22874459 | ID=MS.gene88559.t1.exon5;Parent=MS.gene88559.t1 |
| chr1.4 | CDS | 22874459 | 22874740 | 22874459 | ID=cds.MS.gene88559.t1;Parent=MS.gene88559.t1 |
| chr1.4 | exon | 22874024 | 22874338 | 22874024 | ID=MS.gene88559.t1.exon6;Parent=MS.gene88559.t1 |
| chr1.4 | CDS | 22874024 | 22874338 | 22874024 | ID=cds.MS.gene88559.t1;Parent=MS.gene88559.t1 |
| Gene Sequence |
| Protein sequence |
