Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072763.t1 | XP_003611057.1 | 96.3 | 488 | 17 | 1 | 1 | 488 | 16 | 502 | 1.90E-274 | 954.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072763.t1 | P22503 | 80.1 | 478 | 94 | 1 | 5 | 482 | 19 | 495 | 1.1e-230 | 800.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072763.t1 | G7KBZ9 | 96.3 | 488 | 17 | 1 | 1 | 488 | 16 | 502 | 1.4e-274 | 954.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049182 | MS.gene072763 | 0.802488 | 5.48E-49 | -1.69E-46 |
MS.gene055549 | MS.gene072763 | 0.838527 | 2.73E-57 | -1.69E-46 |
MS.gene055550 | MS.gene072763 | 0.843926 | 1.04E-58 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072763.t1 | MTR_5g009970 | 96.721 | 488 | 15 | 1 | 1 | 488 | 16 | 502 | 0.0 | 978 |
MS.gene072763.t1 | MTR_5g009970 | 96.667 | 420 | 14 | 0 | 69 | 488 | 9 | 428 | 0.0 | 848 |
MS.gene072763.t1 | MTR_5g010000 | 86.128 | 483 | 66 | 1 | 6 | 488 | 20 | 501 | 0.0 | 826 |
MS.gene072763.t1 | MTR_5g009970 | 96.509 | 401 | 14 | 0 | 88 | 488 | 1 | 401 | 0.0 | 808 |
MS.gene072763.t1 | MTR_5g009970 | 96.697 | 333 | 11 | 0 | 156 | 488 | 1 | 333 | 0.0 | 671 |
MS.gene072763.t1 | MTR_3g080810 | 54.060 | 468 | 193 | 9 | 24 | 477 | 32 | 491 | 6.33e-179 | 511 |
MS.gene072763.t1 | MTR_3g117500 | 48.632 | 475 | 230 | 6 | 18 | 481 | 15 | 486 | 2.04e-162 | 469 |
MS.gene072763.t1 | MTR_3g105230 | 48.539 | 445 | 224 | 4 | 26 | 469 | 29 | 469 | 4.05e-161 | 465 |
MS.gene072763.t1 | MTR_8g104820 | 48.077 | 468 | 225 | 9 | 23 | 477 | 26 | 488 | 9.46e-161 | 465 |
MS.gene072763.t1 | MTR_3g023740 | 47.771 | 471 | 240 | 4 | 9 | 479 | 15 | 479 | 9.41e-160 | 462 |
MS.gene072763.t1 | MTR_5g085730 | 47.182 | 479 | 234 | 6 | 18 | 480 | 22 | 497 | 9.65e-160 | 463 |
MS.gene072763.t1 | MTR_3g010330 | 49.345 | 458 | 221 | 6 | 27 | 477 | 25 | 478 | 6.93e-158 | 457 |
MS.gene072763.t1 | MTR_8g099410 | 49.364 | 472 | 220 | 6 | 23 | 479 | 24 | 491 | 2.01e-157 | 457 |
MS.gene072763.t1 | MTR_5g093590 | 49.153 | 472 | 222 | 7 | 24 | 479 | 31 | 500 | 1.08e-156 | 455 |
MS.gene072763.t1 | MTR_4g035955 | 48.180 | 467 | 232 | 5 | 16 | 477 | 3 | 464 | 1.95e-156 | 453 |
MS.gene072763.t1 | MTR_8g099410 | 49.680 | 469 | 217 | 6 | 26 | 479 | 27 | 491 | 3.55e-156 | 458 |
MS.gene072763.t1 | MTR_1g088190 | 49.356 | 466 | 203 | 8 | 24 | 479 | 36 | 478 | 5.18e-155 | 450 |
MS.gene072763.t1 | MTR_3g080190 | 47.269 | 476 | 232 | 6 | 21 | 480 | 34 | 506 | 7.80e-155 | 451 |
MS.gene072763.t1 | MTR_4g035930 | 47.505 | 461 | 232 | 5 | 22 | 477 | 10 | 465 | 7.07e-150 | 436 |
MS.gene072763.t1 | MTR_4g074960 | 47.872 | 470 | 225 | 7 | 26 | 479 | 27 | 492 | 9.60e-149 | 439 |
MS.gene072763.t1 | MTR_4g035975 | 46.414 | 474 | 232 | 9 | 20 | 477 | 20 | 487 | 8.76e-146 | 427 |
MS.gene072763.t1 | MTR_1g037340 | 47.084 | 463 | 229 | 7 | 27 | 479 | 25 | 481 | 6.32e-140 | 411 |
MS.gene072763.t1 | MTR_3g113720 | 42.735 | 468 | 247 | 6 | 28 | 480 | 58 | 519 | 2.39e-130 | 388 |
MS.gene072763.t1 | MTR_8g075990 | 42.857 | 469 | 247 | 7 | 28 | 481 | 64 | 526 | 1.92e-122 | 368 |
MS.gene072763.t1 | MTR_3g090540 | 39.315 | 496 | 253 | 16 | 20 | 479 | 100 | 583 | 5.86e-104 | 323 |
MS.gene072763.t1 | MTR_2g028480 | 40.000 | 490 | 246 | 13 | 27 | 479 | 111 | 589 | 1.51e-101 | 317 |
MS.gene072763.t1 | MTR_3g082440 | 37.449 | 494 | 264 | 15 | 27 | 486 | 116 | 598 | 1.32e-92 | 294 |
MS.gene072763.t1 | MTR_1g088190 | 47.386 | 306 | 132 | 5 | 24 | 320 | 36 | 321 | 7.75e-85 | 265 |
MS.gene072763.t1 | MTR_7g108925 | 50.633 | 158 | 76 | 2 | 322 | 479 | 43 | 198 | 5.89e-55 | 183 |
MS.gene072763.t1 | MTR_0393s0050 | 50.345 | 145 | 71 | 1 | 322 | 466 | 20 | 163 | 1.14e-42 | 150 |
MS.gene072763.t1 | MTR_1g037320 | 46.250 | 160 | 83 | 1 | 88 | 244 | 1 | 160 | 2.41e-39 | 144 |
MS.gene072763.t1 | MTR_1g037320 | 50.820 | 122 | 59 | 1 | 356 | 477 | 169 | 289 | 1.62e-32 | 125 |
MS.gene072763.t1 | MTR_4g128810 | 43.038 | 158 | 83 | 3 | 331 | 488 | 189 | 339 | 6.08e-31 | 123 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072763.t1 | AT4G23560 | 69.198 | 474 | 145 | 1 | 8 | 481 | 4 | 476 | 0.0 | 670 |
MS.gene072763.t1 | AT4G09740 | 67.932 | 474 | 151 | 1 | 8 | 481 | 4 | 476 | 0.0 | 659 |
MS.gene072763.t1 | AT1G02800 | 53.879 | 464 | 199 | 7 | 25 | 479 | 41 | 498 | 2.48e-176 | 504 |
MS.gene072763.t1 | AT4G02290 | 51.188 | 463 | 213 | 6 | 24 | 477 | 49 | 507 | 1.49e-169 | 488 |
MS.gene072763.t1 | AT1G23210 | 48.637 | 477 | 227 | 8 | 8 | 474 | 12 | 480 | 3.95e-165 | 476 |
MS.gene072763.t1 | AT1G70710 | 47.727 | 484 | 239 | 7 | 1 | 474 | 1 | 480 | 2.06e-163 | 471 |
MS.gene072763.t1 | AT4G39010 | 49.364 | 472 | 224 | 7 | 22 | 481 | 24 | 492 | 1.07e-162 | 470 |
MS.gene072763.t1 | AT3G43860 | 49.011 | 455 | 229 | 3 | 27 | 481 | 34 | 485 | 7.69e-155 | 449 |
MS.gene072763.t1 | AT3G43860 | 49.011 | 455 | 229 | 3 | 27 | 481 | 34 | 485 | 7.69e-155 | 449 |
MS.gene072763.t1 | AT2G32990 | 46.089 | 473 | 240 | 5 | 19 | 477 | 31 | 502 | 1.26e-153 | 448 |
MS.gene072763.t1 | AT4G11050 | 47.146 | 473 | 231 | 6 | 24 | 481 | 23 | 491 | 1.32e-152 | 446 |
MS.gene072763.t1 | AT4G11050 | 47.146 | 473 | 231 | 6 | 24 | 481 | 23 | 491 | 6.43e-152 | 447 |
MS.gene072763.t1 | AT4G11050 | 47.146 | 473 | 231 | 6 | 24 | 481 | 23 | 491 | 7.56e-152 | 447 |
MS.gene072763.t1 | AT4G38990 | 47.292 | 480 | 231 | 8 | 16 | 477 | 12 | 487 | 4.49e-151 | 440 |
MS.gene072763.t1 | AT1G71380 | 46.985 | 481 | 242 | 8 | 8 | 481 | 6 | 480 | 7.54e-151 | 439 |
MS.gene072763.t1 | AT1G64390 | 47.134 | 471 | 230 | 6 | 24 | 479 | 22 | 488 | 7.67e-151 | 444 |
MS.gene072763.t1 | AT4G39000 | 47.210 | 466 | 227 | 9 | 26 | 477 | 24 | 484 | 8.85e-149 | 434 |
MS.gene072763.t1 | AT1G22880 | 48.387 | 465 | 228 | 7 | 24 | 481 | 21 | 480 | 9.51e-149 | 434 |
MS.gene072763.t1 | AT1G48930 | 50.323 | 465 | 216 | 5 | 26 | 477 | 29 | 491 | 1.12e-146 | 434 |
MS.gene072763.t1 | AT2G44540 | 48.060 | 464 | 230 | 5 | 25 | 480 | 31 | 491 | 7.96e-146 | 427 |
MS.gene072763.t1 | AT2G44570 | 47.854 | 466 | 231 | 7 | 23 | 479 | 29 | 491 | 2.96e-145 | 425 |
MS.gene072763.t1 | AT2G44550 | 47.505 | 461 | 230 | 6 | 25 | 477 | 31 | 487 | 9.48e-144 | 421 |
MS.gene072763.t1 | AT2G44560 | 47.300 | 463 | 233 | 5 | 25 | 479 | 31 | 490 | 3.60e-140 | 412 |
MS.gene072763.t1 | AT1G19940 | 44.880 | 459 | 236 | 6 | 27 | 474 | 48 | 500 | 4.99e-134 | 397 |
MS.gene072763.t1 | AT1G19940 | 44.880 | 459 | 236 | 6 | 27 | 474 | 48 | 500 | 4.99e-134 | 397 |
MS.gene072763.t1 | AT4G02290 | 48.500 | 400 | 191 | 7 | 88 | 477 | 1 | 395 | 4.33e-133 | 391 |
MS.gene072763.t1 | AT1G75680 | 45.614 | 456 | 227 | 8 | 28 | 470 | 58 | 505 | 3.90e-131 | 390 |
MS.gene072763.t1 | AT1G22880 | 46.135 | 401 | 204 | 7 | 88 | 481 | 1 | 396 | 2.45e-120 | 358 |
MS.gene072763.t1 | AT4G39010 | 46.175 | 366 | 183 | 6 | 22 | 375 | 24 | 387 | 4.63e-115 | 344 |
MS.gene072763.t1 | AT2G44570 | 43.915 | 378 | 200 | 6 | 23 | 391 | 29 | 403 | 1.67e-100 | 308 |
MS.gene072763.t1 | AT5G49720 | 39.228 | 492 | 253 | 13 | 27 | 482 | 108 | 589 | 1.77e-98 | 309 |
MS.gene072763.t1 | AT1G19940 | 43.213 | 361 | 193 | 4 | 27 | 376 | 48 | 407 | 5.04e-96 | 296 |
MS.gene072763.t1 | AT1G65610 | 37.652 | 494 | 259 | 17 | 27 | 486 | 116 | 594 | 7.49e-94 | 297 |
MS.gene072763.t1 | AT4G24260 | 39.034 | 497 | 255 | 14 | 27 | 486 | 108 | 593 | 7.65e-94 | 297 |
MS.gene072763.t1 | AT4G38990 | 44.193 | 353 | 169 | 6 | 16 | 361 | 12 | 343 | 2.76e-89 | 277 |
MS.gene072763.t1 | AT1G22880 | 48.039 | 306 | 149 | 5 | 24 | 322 | 21 | 323 | 2.82e-88 | 274 |
MS.gene072763.t1 | AT4G24260 | 36.693 | 387 | 202 | 12 | 27 | 376 | 108 | 488 | 9.04e-58 | 199 |
MS.gene072763.t1 | AT4G24260 | 38.486 | 317 | 156 | 10 | 27 | 308 | 108 | 420 | 1.76e-51 | 181 |
MS.gene072763.t1 | AT3G42153 | 54.348 | 92 | 38 | 1 | 233 | 320 | 16 | 107 | 8.61e-28 | 107 |
Find 108 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCCCCTCCACTTCACTCTT+TGG | 0.212758 | 5.3:-3718951 | None:intergenic |
ATATCTTTGGCAGGTGAATT+TGG | 0.221903 | 5.3:+3719702 | MS.gene072763:intron |
TAATAATTCCTCATCCATTA+TGG | 0.271569 | 5.3:-3718830 | None:intergenic |
TCAATCTTGTAAAGTGTTCT+TGG | 0.279231 | 5.3:-3720288 | None:intergenic |
TCAGCTGCAGCCTCAGTTCC+AGG | 0.287596 | 5.3:-3720321 | None:intergenic |
CAGATCTTGCATCATTAAAT+TGG | 0.290399 | 5.3:-3721667 | None:intergenic |
GATTTCAGAGGATGTGAAAT+TGG | 0.308600 | 5.3:-3721298 | None:intergenic |
ATCTGTAGAGAGTAACTTCC+TGG | 0.325679 | 5.3:-3721034 | None:intergenic |
CACTTCACTCTTTGGTCTTT+AGG | 0.330155 | 5.3:-3718943 | None:intergenic |
TATATGAATGCTGCGTTCAT+AGG | 0.331549 | 5.3:+3721716 | MS.gene072763:CDS |
ATGTCATACATGGTGGGATA+TGG | 0.339226 | 5.3:+3721476 | MS.gene072763:CDS |
ATAGCACCCACATGAATATT+AGG | 0.348295 | 5.3:-3721620 | None:intergenic |
TCTCCGCCGTGCTATTCGTT+GGG | 0.366022 | 5.3:+3719852 | MS.gene072763:CDS |
TAATGGTCTATTAGCCATAA+TGG | 0.374842 | 5.3:+3718816 | MS.gene072763:CDS |
TACAGTCAGCTTATTGAGTT+GGG | 0.376730 | 5.3:+3719780 | MS.gene072763:CDS |
TCATTGCAATCCACTTTAGC+TGG | 0.382872 | 5.3:-3721560 | None:intergenic |
CCCACATGAATATTAGGATT+AGG | 0.392902 | 5.3:-3721614 | None:intergenic |
ATCTCCGCCGTGCTATTCGT+TGG | 0.402115 | 5.3:+3719851 | MS.gene072763:CDS |
AATATTAGGATTAGGATTAG+AGG | 0.403218 | 5.3:-3721606 | None:intergenic |
TTAAATTGGTCATTAAAATC+AGG | 0.410829 | 5.3:-3721653 | None:intergenic |
AGCTGGGACAACAAATTTGT+TGG | 0.410959 | 5.3:+3720800 | MS.gene072763:CDS |
CAAAGTTCACCCAGCTAAAG+TGG | 0.412258 | 5.3:+3721550 | MS.gene072763:CDS |
CCTCTGTGATGTAATTGCTT+TGG | 0.412449 | 5.3:-3721509 | None:intergenic |
ACCGAAAGGATGAACTGTTA+TGG | 0.414159 | 5.3:+3720684 | MS.gene072763:intron |
CAAGTACTTGCTTTCTCCAC+TGG | 0.416765 | 5.3:-3720729 | None:intergenic |
CACCATGTATGACATCTTCA+TGG | 0.417078 | 5.3:-3721468 | None:intergenic |
CCATTCTACTGCTCGTACTC+TGG | 0.417471 | 5.3:+3720563 | MS.gene072763:CDS |
GCTGGGTGAACTTTGATTGA+AGG | 0.420828 | 5.3:-3721542 | None:intergenic |
CTTGGAGTATCCATGTCTTC+CGG | 0.422002 | 5.3:-3720270 | None:intergenic |
GCTGGTGATAATGTCAAGTT+TGG | 0.423084 | 5.3:+3719742 | MS.gene072763:CDS |
AACTGTTATGGGCTGCTGCT+TGG | 0.428578 | 5.3:+3720696 | MS.gene072763:CDS |
TTGATTGCCGAAATTAAAAC+CGG | 0.431224 | 5.3:+3721752 | MS.gene072763:CDS |
AGGCAGCGTCTGAGTTCAGC+TGG | 0.451630 | 5.3:+3720783 | MS.gene072763:CDS |
AGATAACCAAGGTTGGAATC+AGG | 0.451903 | 5.3:+3720763 | MS.gene072763:CDS |
GCTAAAGTGGATTGCAATGA+TGG | 0.456802 | 5.3:+3721563 | MS.gene072763:CDS |
CTTTGGCAGGTGAATTTGGT+TGG | 0.458373 | 5.3:+3719706 | MS.gene072763:intron |
TTCACCATCACTATGAATCT+TGG | 0.458528 | 5.3:-3720990 | None:intergenic |
TGGAACTGAGGCTGCAGCTG+AGG | 0.459683 | 5.3:+3720323 | MS.gene072763:CDS |
TAGTACCATGGTTGAGGTTG+TGG | 0.461334 | 5.3:-3721217 | None:intergenic |
TCATCAATGTTGGGAGCGTC+CGG | 0.461447 | 5.3:+3720251 | MS.gene072763:CDS |
CCGAAAGGATGAACTGTTAT+GGG | 0.463366 | 5.3:+3720685 | MS.gene072763:intron |
ATTCATGTGGGTGCTATTGT+TGG | 0.466637 | 5.3:+3721626 | MS.gene072763:CDS |
TTACAGTCAGCTTATTGAGT+TGG | 0.467244 | 5.3:+3719779 | MS.gene072763:CDS |
TACAACTATGCAGATGCTCT+TGG | 0.494973 | 5.3:+3718877 | MS.gene072763:CDS |
GTGAACTTTGATTGAAGGAA+TGG | 0.507187 | 5.3:-3721537 | None:intergenic |
AAGATTGATGCTAATTCCCC+TGG | 0.508528 | 5.3:+3720303 | MS.gene072763:CDS |
AAACGCAGATCATCAATGTT+GGG | 0.510319 | 5.3:+3720242 | MS.gene072763:CDS |
CCAGAGTACGAGCAGTAGAA+TGG | 0.510375 | 5.3:-3720563 | None:intergenic |
ACATAGGTGGACTACATACT+AGG | 0.511456 | 5.3:+3721437 | MS.gene072763:intron |
GAAACGCAGATCATCAATGT+TGG | 0.511702 | 5.3:+3720241 | MS.gene072763:CDS |
CACGGCGGAGATAATCAATC+TGG | 0.513292 | 5.3:-3719840 | None:intergenic |
TTTATATGTGCATTGATGCC+AGG | 0.514115 | 5.3:+3721016 | MS.gene072763:CDS |
ACGCTGCCTGATTCCAACCT+TGG | 0.518138 | 5.3:-3720769 | None:intergenic |
CAGCTGCAGCCTCAGTTCCA+GGG | 0.523289 | 5.3:-3720320 | None:intergenic |
GGAATTCTATGGTGGGAAGA+AGG | 0.526288 | 5.3:+3720961 | MS.gene072763:intron |
CTACAGATTAAAACAACTCC+TGG | 0.527682 | 5.3:+3721049 | MS.gene072763:CDS |
GGCATGAGTAGTAAGAATAA+TGG | 0.527975 | 5.3:+3718799 | None:intergenic |
CATGTGGGTGCTATTGTTGG+AGG | 0.529821 | 5.3:+3721629 | MS.gene072763:CDS |
TCCTAATCCTAATATTCATG+TGG | 0.530984 | 5.3:+3721613 | MS.gene072763:CDS |
GAACGCAGCATTCATATAAG+TGG | 0.537189 | 5.3:-3721711 | None:intergenic |
GCCTGTGTGAAGAGCGTGGT+TGG | 0.537258 | 5.3:-3719907 | None:intergenic |
TGGCAGGTGAATTTGGTTGG+AGG | 0.540826 | 5.3:+3719709 | MS.gene072763:intron |
AATGAATAGTACCATGGTTG+AGG | 0.541527 | 5.3:-3721223 | None:intergenic |
TGCTAATTCCCCTGGAACTG+AGG | 0.542113 | 5.3:+3720311 | MS.gene072763:CDS |
TGCAAAGGCTCTGATTTCAG+AGG | 0.549636 | 5.3:-3721310 | None:intergenic |
CAGAGCCTTTGCAAAATCAC+AGG | 0.555689 | 5.3:+3721320 | MS.gene072763:CDS |
GGAGACTCAGCTCTCTCTGA+TGG | 0.562146 | 5.3:+3718970 | MS.gene072763:CDS |
GTTGGAGGATACTATGATGC+TGG | 0.563481 | 5.3:+3719724 | MS.gene072763:CDS |
ACATCACAGATAACCAAGGT+TGG | 0.565178 | 5.3:+3720756 | MS.gene072763:CDS |
TTGGGAGCGTCCGGAAGACA+TGG | 0.572244 | 5.3:+3720260 | MS.gene072763:CDS |
CATTGCAATCCACTTTAGCT+GGG | 0.572753 | 5.3:-3721559 | None:intergenic |
TGCATAGTTGTAACTAGATG+AGG | 0.579774 | 5.3:-3718866 | None:intergenic |
TGTGATTGCTAGGTTGGAGA+AGG | 0.581440 | 5.3:+3720219 | MS.gene072763:intron |
GGCTGCTGCTTGGTTATACA+AGG | 0.582101 | 5.3:+3720706 | MS.gene072763:CDS |
TCTATTAGCCATAATGGATG+AGG | 0.585271 | 5.3:+3718822 | MS.gene072763:CDS |
AGCTGCAGCCTCAGTTCCAG+GGG | 0.585982 | 5.3:-3720319 | None:intergenic |
GACCAAAGAGTGAAGTGGAG+GGG | 0.590017 | 5.3:+3718949 | MS.gene072763:CDS |
AAGCTGACTGTAAATGACAT+TGG | 0.590276 | 5.3:-3719769 | None:intergenic |
GTGATAATGTCAAGTTTGGA+TGG | 0.592513 | 5.3:+3719746 | MS.gene072763:CDS |
GGAGAAAATGAATAGTACCA+TGG | 0.593160 | 5.3:-3721229 | None:intergenic |
AAGTATAGAGGCACCTACAC+GGG | 0.600830 | 5.3:+3720533 | MS.gene072763:CDS |
AGACCAAAGAGTGAAGTGGA+GGG | 0.601742 | 5.3:+3718948 | MS.gene072763:CDS |
ACCATGTATGACATCTTCAT+GGG | 0.604739 | 5.3:-3721467 | None:intergenic |
TGAAATTGGTAGAGCCACAA+TGG | 0.606299 | 5.3:-3721284 | None:intergenic |
TCCCATGAAGATGTCATACA+TGG | 0.607679 | 5.3:+3721466 | MS.gene072763:CDS |
CATATTGATGGAATCCATTG+TGG | 0.608291 | 5.3:+3721270 | MS.gene072763:CDS |
CCTAATCCTAATATTCATGT+GGG | 0.608435 | 5.3:+3721614 | MS.gene072763:CDS |
CTCCGCCGTGCTATTCGTTG+GGG | 0.608919 | 5.3:+3719853 | MS.gene072763:CDS |
CAAGTATAGAGGCACCTACA+CGG | 0.612002 | 5.3:+3720532 | MS.gene072763:CDS |
GCAGCATTCATATAAGTGGT+AGG | 0.613722 | 5.3:-3721707 | None:intergenic |
TTTACTAGGAATTCTATGGT+GGG | 0.615507 | 5.3:+3720954 | MS.gene072763:intron |
TTAGCCAAGATTCATAGTGA+TGG | 0.625051 | 5.3:+3720986 | MS.gene072763:CDS |
AGTTCAAACATTACTAACAC+AGG | 0.627457 | 5.3:+3720823 | MS.gene072763:CDS |
ATGAAGATGTCATACATGGT+GGG | 0.629064 | 5.3:+3721470 | MS.gene072763:CDS |
TGATTGCCGAAATTAAAACC+GGG | 0.629615 | 5.3:+3721753 | MS.gene072763:CDS |
TCCAACCACGCTCTTCACAC+AGG | 0.632498 | 5.3:+3719906 | MS.gene072763:CDS |
AAGACCAAAGAGTGAAGTGG+AGG | 0.641884 | 5.3:+3718947 | MS.gene072763:CDS |
GGCAGCGTCTGAGTTCAGCT+GGG | 0.647866 | 5.3:+3720784 | MS.gene072763:CDS |
GAATGGACAAGAACCCGTGT+AGG | 0.649143 | 5.3:-3720546 | None:intergenic |
CATGAAGATGTCATACATGG+TGG | 0.650028 | 5.3:+3721469 | MS.gene072763:CDS |
CTAAAGACCAAAGAGTGAAG+TGG | 0.653325 | 5.3:+3718944 | MS.gene072763:CDS |
ATACACCACAACCTCAACCA+TGG | 0.664872 | 5.3:+3721212 | MS.gene072763:CDS |
GCTTGGTTATACAAGGCCAG+TGG | 0.674115 | 5.3:+3720713 | MS.gene072763:CDS |
TTGTACCCCAACGAATAGCA+CGG | 0.684450 | 5.3:-3719858 | None:intergenic |
ACATGCCTGTGTGAAGAGCG+TGG | 0.710661 | 5.3:-3719911 | None:intergenic |
AAGTACATCACAGATAACCA+AGG | 0.712270 | 5.3:+3720752 | MS.gene072763:CDS |
CCAAAGCAATTACATCACAG+AGG | 0.748019 | 5.3:+3721509 | MS.gene072763:CDS |
TACCCCAACGAATAGCACGG+CGG | 0.808256 | 5.3:-3719855 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGTAAAAAAAATATTATGAT+CGG | + | chr5.3:3719632-3719651 | MS.gene072763:intron | 10.0% |
!!! | AAATGTTTTTAATAATTTGA+TGG | + | chr5.3:3719403-3719422 | MS.gene072763:intron | 10.0% |
!!! | TTACTTTTTTTTTTTTTACT+AGG | + | chr5.3:3720940-3720959 | MS.gene072763:intron | 10.0% |
!!! | TTTAATTTATATACAATGTT+TGG | - | chr5.3:3719493-3719512 | None:intergenic | 10.0% |
!! | CTAAATAAAAATCATATTGA+TGG | + | chr5.3:3721258-3721277 | MS.gene072763:CDS | 15.0% |
!!! | ATGATTTTTATTTAGGATTT+TGG | - | chr5.3:3721253-3721272 | None:intergenic | 15.0% |
!!! | CATCAATATGATTTTTATTT+AGG | - | chr5.3:3721260-3721279 | None:intergenic | 15.0% |
!! | ACTTTAATTAGTCATAATCA+TGG | - | chr5.3:3719615-3719634 | None:intergenic | 20.0% |
!! | ATGAAGCAAAATAAAGAAAT+GGG | - | chr5.3:3721384-3721403 | None:intergenic | 20.0% |
!! | ATTATAGTGAGATTAGAATA+TGG | + | chr5.3:3719095-3719114 | MS.gene072763:intron | 20.0% |
!! | TATATCAGATTGTTACTATA+TGG | - | chr5.3:3720876-3720895 | None:intergenic | 20.0% |
!! | TATGAAGCAAAATAAAGAAA+TGG | - | chr5.3:3721385-3721404 | None:intergenic | 20.0% |
!! | TCATGTGTATTATATATCTT+TGG | + | chr5.3:3719689-3719708 | MS.gene072763:intron | 20.0% |
!! | TTAAATTGGTCATTAAAATC+AGG | - | chr5.3:3721656-3721675 | None:intergenic | 20.0% |
!! | TTAATGAGTTAATTCTTTCT+TGG | - | chr5.3:3720918-3720937 | None:intergenic | 20.0% |
!! | TTATAGTGAGATTAGAATAT+GGG | + | chr5.3:3719096-3719115 | MS.gene072763:intron | 20.0% |
!! | TTCTTAGTATCATTCATTTA+TGG | + | chr5.3:3720641-3720660 | MS.gene072763:intron | 20.0% |
!!! | TTTTTTTACTAGGAATTCTA+TGG | + | chr5.3:3720950-3720969 | MS.gene072763:intron | 20.0% |
! | AATATTAGGATTAGGATTAG+AGG | - | chr5.3:3721609-3721628 | None:intergenic | 25.0% |
! | AGTACTTTGTCATGATATAT+AGG | - | chr5.3:3720115-3720134 | None:intergenic | 25.0% |
! | AGTCATAGGTAAAGTAATTA+AGG | - | chr5.3:3719667-3719686 | None:intergenic | 25.0% |
! | ATCAAGAAATCTATCAAAAG+GGG | + | chr5.3:3719233-3719252 | MS.gene072763:intron | 25.0% |
! | ATTATATTTGTAGTGTTACC+AGG | - | chr5.3:3721070-3721089 | None:intergenic | 25.0% |
! | GATCAAGAAATCTATCAAAA+GGG | + | chr5.3:3719232-3719251 | MS.gene072763:intron | 25.0% |
! | GTACTTTGTCATGATATATA+GGG | - | chr5.3:3720114-3720133 | None:intergenic | 25.0% |
! | TAATAATTCCTCATCCATTA+TGG | - | chr5.3:3718833-3718852 | None:intergenic | 25.0% |
! | TGATCAAGAAATCTATCAAA+AGG | + | chr5.3:3719231-3719250 | MS.gene072763:intron | 25.0% |
!! | AGTTAAGTTTTTAATGCATG+AGG | + | chr5.3:3719127-3719146 | MS.gene072763:intron | 25.0% |
!! | GTTAAGTTTTTAATGCATGA+GGG | + | chr5.3:3719128-3719147 | MS.gene072763:intron | 25.0% |
!! | TTAAGTTTTTAATGCATGAG+GGG | + | chr5.3:3719129-3719148 | MS.gene072763:intron | 25.0% |
!! | TTTTTGAATTTTGTACCGAA+AGG | + | chr5.3:3720670-3720689 | MS.gene072763:intron | 25.0% |
!!! | ATTTGCTATATTGTTAACTC+AGG | + | chr5.3:3721153-3721172 | MS.gene072763:intron | 25.0% |
AAGTAAGAAATTACAGCTTG+TGG | + | chr5.3:3720591-3720610 | MS.gene072763:intron | 30.0% | |
AATATTTAACCTGCAACACA+AGG | - | chr5.3:3720175-3720194 | None:intergenic | 30.0% | |
ACAAGCTGTAATTTCTTACT+TGG | - | chr5.3:3720592-3720611 | None:intergenic | 30.0% | |
AGTTCAAACATTACTAACAC+AGG | + | chr5.3:3720823-3720842 | MS.gene072763:CDS | 30.0% | |
ATTGAATGCGTACATAACAT+AGG | + | chr5.3:3721421-3721440 | MS.gene072763:intron | 30.0% | |
CAGATCTTGCATCATTAAAT+TGG | - | chr5.3:3721670-3721689 | None:intergenic | 30.0% | |
CATGATATATAGGGTAAGTT+TGG | - | chr5.3:3720105-3720124 | None:intergenic | 30.0% | |
CCTAATCCTAATATTCATGT+GGG | + | chr5.3:3721614-3721633 | MS.gene072763:CDS | 30.0% | |
GTGTATTATATATCTTTGGC+AGG | + | chr5.3:3719693-3719712 | MS.gene072763:intron | 30.0% | |
TAAGAATTGTTGTGATTGCT+AGG | + | chr5.3:3720209-3720228 | MS.gene072763:intron | 30.0% | |
TAATACACATGATCAGTCAT+AGG | - | chr5.3:3719681-3719700 | None:intergenic | 30.0% | |
TAATGGTCTATTAGCCATAA+TGG | + | chr5.3:3718816-3718835 | MS.gene072763:CDS | 30.0% | |
TCAAGAAATCTATCAAAAGG+GGG | + | chr5.3:3719234-3719253 | MS.gene072763:intron | 30.0% | |
TCCTAATCCTAATATTCATG+TGG | + | chr5.3:3721613-3721632 | MS.gene072763:CDS | 30.0% | |
TCTATAGTTACACATATGAG+TGG | - | chr5.3:3719366-3719385 | None:intergenic | 30.0% | |
TGTGTTGCAGGTTAAATATT+TGG | + | chr5.3:3720175-3720194 | MS.gene072763:intron | 30.0% | |
TTGAATGTTATTGCATGAGA+GGG | + | chr5.3:3719553-3719572 | MS.gene072763:intron | 30.0% | |
TTGATTGCCGAAATTAAAAC+CGG | + | chr5.3:3721752-3721771 | MS.gene072763:CDS | 30.0% | |
TTGTCCTTCAAAAAACAAGA+TGG | - | chr5.3:3718908-3718927 | None:intergenic | 30.0% | |
TTTACTAGGAATTCTATGGT+GGG | + | chr5.3:3720954-3720973 | MS.gene072763:intron | 30.0% | |
! | AAATACCTGTGATTTTGCAA+AGG | - | chr5.3:3721328-3721347 | None:intergenic | 30.0% |
! | GAGAGACTGTTAATAACTTT+TGG | - | chr5.3:3720045-3720064 | None:intergenic | 30.0% |
! | TCAATCTTGTAAAGTGTTCT+TGG | - | chr5.3:3720291-3720310 | None:intergenic | 30.0% |
! | TTTTACTAGGAATTCTATGG+TGG | + | chr5.3:3720953-3720972 | MS.gene072763:intron | 30.0% |
!! | ACATGTTCATAAGCTGTTTT+CGG | - | chr5.3:3720008-3720027 | None:intergenic | 30.0% |
!!! | AAAGCCATCTTGTTTTTTGA+AGG | + | chr5.3:3718901-3718920 | MS.gene072763:CDS | 30.0% |
AAACGCAGATCATCAATGTT+GGG | + | chr5.3:3720242-3720261 | MS.gene072763:CDS | 35.0% | |
AAGCTGACTGTAAATGACAT+TGG | - | chr5.3:3719772-3719791 | None:intergenic | 35.0% | |
AAGTACATCACAGATAACCA+AGG | + | chr5.3:3720752-3720771 | MS.gene072763:CDS | 35.0% | |
AATGAATAGTACCATGGTTG+AGG | - | chr5.3:3721226-3721245 | None:intergenic | 35.0% | |
AATTGTTGTGATTGCTAGGT+TGG | + | chr5.3:3720213-3720232 | MS.gene072763:intron | 35.0% | |
ACCATGTATGACATCTTCAT+GGG | - | chr5.3:3721470-3721489 | None:intergenic | 35.0% | |
ATAGCACCCACATGAATATT+AGG | - | chr5.3:3721623-3721642 | None:intergenic | 35.0% | |
ATATCTTTGGCAGGTGAATT+TGG | + | chr5.3:3719702-3719721 | MS.gene072763:intron | 35.0% | |
ATGAAGATGTCATACATGGT+GGG | + | chr5.3:3721470-3721489 | MS.gene072763:CDS | 35.0% | |
CATATTGATGGAATCCATTG+TGG | + | chr5.3:3721270-3721289 | MS.gene072763:CDS | 35.0% | |
CCCACATGAATATTAGGATT+AGG | - | chr5.3:3721617-3721636 | None:intergenic | 35.0% | |
CTACAGATTAAAACAACTCC+TGG | + | chr5.3:3721049-3721068 | MS.gene072763:CDS | 35.0% | |
CTTGAATGTTATTGCATGAG+AGG | + | chr5.3:3719552-3719571 | MS.gene072763:intron | 35.0% | |
GATTTCAGAGGATGTGAAAT+TGG | - | chr5.3:3721301-3721320 | None:intergenic | 35.0% | |
GGAGAAAATGAATAGTACCA+TGG | - | chr5.3:3721232-3721251 | None:intergenic | 35.0% | |
GTGAACTTTGATTGAAGGAA+TGG | - | chr5.3:3721540-3721559 | None:intergenic | 35.0% | |
TACAGTCAGCTTATTGAGTT+GGG | + | chr5.3:3719780-3719799 | MS.gene072763:CDS | 35.0% | |
TATATGAATGCTGCGTTCAT+AGG | + | chr5.3:3721716-3721735 | MS.gene072763:CDS | 35.0% | |
TGATTGCCGAAATTAAAACC+GGG | + | chr5.3:3721753-3721772 | MS.gene072763:CDS | 35.0% | |
TGCATAGTTGTAACTAGATG+AGG | - | chr5.3:3718869-3718888 | None:intergenic | 35.0% | |
TGCTATATTGTTAACTCAGG+TGG | + | chr5.3:3721156-3721175 | MS.gene072763:intron | 35.0% | |
TTACAGTCAGCTTATTGAGT+TGG | + | chr5.3:3719779-3719798 | MS.gene072763:CDS | 35.0% | |
TTAGCCAAGATTCATAGTGA+TGG | + | chr5.3:3720986-3721005 | MS.gene072763:CDS | 35.0% | |
TTCACCATCACTATGAATCT+TGG | - | chr5.3:3720993-3721012 | None:intergenic | 35.0% | |
! | GATTTTGCTGACAAGTATAG+AGG | + | chr5.3:3720521-3720540 | MS.gene072763:CDS | 35.0% |
! | GTGATAATGTCAAGTTTGGA+TGG | + | chr5.3:3719746-3719765 | MS.gene072763:CDS | 35.0% |
! | GTTACACATATGAGTGGTTT+TGG | - | chr5.3:3719360-3719379 | None:intergenic | 35.0% |
! | TTTATATGTGCATTGATGCC+AGG | + | chr5.3:3721016-3721035 | MS.gene072763:CDS | 35.0% |
!! | GCTATTTTCACAAGCTATCT+TGG | + | chr5.3:3719964-3719983 | MS.gene072763:intron | 35.0% |
!! | TCTATTAGCCATAATGGATG+AGG | + | chr5.3:3718822-3718841 | MS.gene072763:CDS | 35.0% |
!!! | CATAGTCCCGGTTTTAATTT+CGG | - | chr5.3:3721762-3721781 | None:intergenic | 35.0% |
AAGATTGATGCTAATTCCCC+TGG | + | chr5.3:3720303-3720322 | MS.gene072763:CDS | 40.0% | |
AATCATGGCAGATTGAGAGA+GGG | - | chr5.3:3719600-3719619 | None:intergenic | 40.0% | |
AATGTTATTGCATGAGAGGG+AGG | + | chr5.3:3719556-3719575 | MS.gene072763:intron | 40.0% | |
ACATCACAGATAACCAAGGT+TGG | + | chr5.3:3720756-3720775 | MS.gene072763:CDS | 40.0% | |
ACCGAAAGGATGAACTGTTA+TGG | + | chr5.3:3720684-3720703 | MS.gene072763:intron | 40.0% | |
AGATAACCAAGGTTGGAATC+AGG | + | chr5.3:3720763-3720782 | MS.gene072763:CDS | 40.0% | |
AGCTGGGACAACAAATTTGT+TGG | + | chr5.3:3720800-3720819 | MS.gene072763:CDS | 40.0% | |
ATCTGTAGAGAGTAACTTCC+TGG | - | chr5.3:3721037-3721056 | None:intergenic | 40.0% | |
CACCATGTATGACATCTTCA+TGG | - | chr5.3:3721471-3721490 | None:intergenic | 40.0% | |
CATGAAGATGTCATACATGG+TGG | + | chr5.3:3721469-3721488 | MS.gene072763:CDS | 40.0% | |
CATTGCAATCCACTTTAGCT+GGG | - | chr5.3:3721562-3721581 | None:intergenic | 40.0% | |
CCAAAGCAATTACATCACAG+AGG | + | chr5.3:3721509-3721528 | MS.gene072763:CDS | 40.0% | |
CCCATAACAGTTCATCCTTT+CGG | - | chr5.3:3720688-3720707 | None:intergenic | 40.0% | |
CCGAAAGGATGAACTGTTAT+GGG | + | chr5.3:3720685-3720704 | MS.gene072763:intron | 40.0% | |
CCTCTGTGATGTAATTGCTT+TGG | - | chr5.3:3721512-3721531 | None:intergenic | 40.0% | |
CTAAAGACCAAAGAGTGAAG+TGG | + | chr5.3:3718944-3718963 | MS.gene072763:CDS | 40.0% | |
GAAACGCAGATCATCAATGT+TGG | + | chr5.3:3720241-3720260 | MS.gene072763:CDS | 40.0% | |
GAACGCAGCATTCATATAAG+TGG | - | chr5.3:3721714-3721733 | None:intergenic | 40.0% | |
GAATGCGTACATAACATAGG+TGG | + | chr5.3:3721424-3721443 | MS.gene072763:intron | 40.0% | |
GCAGCATTCATATAAGTGGT+AGG | - | chr5.3:3721710-3721729 | None:intergenic | 40.0% | |
TAATCATGGCAGATTGAGAG+AGG | - | chr5.3:3719601-3719620 | None:intergenic | 40.0% | |
TACAACTATGCAGATGCTCT+TGG | + | chr5.3:3718877-3718896 | MS.gene072763:CDS | 40.0% | |
TCATTGCAATCCACTTTAGC+TGG | - | chr5.3:3721563-3721582 | None:intergenic | 40.0% | |
TCCCATGAAGATGTCATACA+TGG | + | chr5.3:3721466-3721485 | MS.gene072763:CDS | 40.0% | |
TGAAATTGGTAGAGCCACAA+TGG | - | chr5.3:3721287-3721306 | None:intergenic | 40.0% | |
! | ATGTCATACATGGTGGGATA+TGG | + | chr5.3:3721476-3721495 | MS.gene072763:CDS | 40.0% |
! | CACTTCACTCTTTGGTCTTT+AGG | - | chr5.3:3718946-3718965 | None:intergenic | 40.0% |
! | GCTGGTGATAATGTCAAGTT+TGG | + | chr5.3:3719742-3719761 | MS.gene072763:CDS | 40.0% |
!! | ACATAGGTGGACTACATACT+AGG | + | chr5.3:3721437-3721456 | MS.gene072763:intron | 40.0% |
!! | ATTCATGTGGGTGCTATTGT+TGG | + | chr5.3:3721626-3721645 | MS.gene072763:CDS | 40.0% |
!! | GCTAAAGTGGATTGCAATGA+TGG | + | chr5.3:3721563-3721582 | MS.gene072763:CDS | 40.0% |
!! | TTTTTGAAGGACAACGCTCA+GGG | + | chr5.3:3718914-3718933 | MS.gene072763:CDS | 40.0% |
!!! | TTTTTTGAAGGACAACGCTC+AGG | + | chr5.3:3718913-3718932 | MS.gene072763:CDS | 40.0% |
AAGACCAAAGAGTGAAGTGG+AGG | + | chr5.3:3718947-3718966 | MS.gene072763:CDS | 45.0% | |
AGACCAAAGAGTGAAGTGGA+GGG | + | chr5.3:3718948-3718967 | MS.gene072763:CDS | 45.0% | |
ATACACCACAACCTCAACCA+TGG | + | chr5.3:3721212-3721231 | MS.gene072763:CDS | 45.0% | |
ATCATGGCAGATTGAGAGAG+GGG | - | chr5.3:3719599-3719618 | None:intergenic | 45.0% | |
CAAAGTTCACCCAGCTAAAG+TGG | + | chr5.3:3721550-3721569 | MS.gene072763:CDS | 45.0% | |
CAAGTACTTGCTTTCTCCAC+TGG | - | chr5.3:3720732-3720751 | None:intergenic | 45.0% | |
CAGAGCCTTTGCAAAATCAC+AGG | + | chr5.3:3721320-3721339 | MS.gene072763:CDS | 45.0% | |
CTTTGGCAGGTGAATTTGGT+TGG | + | chr5.3:3719706-3719725 | MS.gene072763:intron | 45.0% | |
GCTGGGTGAACTTTGATTGA+AGG | - | chr5.3:3721545-3721564 | None:intergenic | 45.0% | |
GTACATATGCCTTGTGTTGC+AGG | + | chr5.3:3720163-3720182 | MS.gene072763:intron | 45.0% | |
GTTGGAGGATACTATGATGC+TGG | + | chr5.3:3719724-3719743 | MS.gene072763:CDS | 45.0% | |
TAGTACCATGGTTGAGGTTG+TGG | - | chr5.3:3721220-3721239 | None:intergenic | 45.0% | |
TTGTACCCCAACGAATAGCA+CGG | - | chr5.3:3719861-3719880 | None:intergenic | 45.0% | |
! | CTTGGAGTATCCATGTCTTC+CGG | - | chr5.3:3720273-3720292 | None:intergenic | 45.0% |
! | GGAATTCTATGGTGGGAAGA+AGG | + | chr5.3:3720961-3720980 | MS.gene072763:intron | 45.0% |
! | TGCAAAGGCTCTGATTTCAG+AGG | - | chr5.3:3721313-3721332 | None:intergenic | 45.0% |
! | TGTGATTGCTAGGTTGGAGA+AGG | + | chr5.3:3720219-3720238 | MS.gene072763:intron | 45.0% |
!! | AAGTATAGAGGCACCTACAC+GGG | + | chr5.3:3720533-3720552 | MS.gene072763:CDS | 45.0% |
!! | CAAGTATAGAGGCACCTACA+CGG | + | chr5.3:3720532-3720551 | MS.gene072763:CDS | 45.0% |
CACGGCGGAGATAATCAATC+TGG | - | chr5.3:3719843-3719862 | None:intergenic | 50.0% | |
CCAGAGTACGAGCAGTAGAA+TGG | - | chr5.3:3720566-3720585 | None:intergenic | 50.0% | |
CCATTCTACTGCTCGTACTC+TGG | + | chr5.3:3720563-3720582 | MS.gene072763:CDS | 50.0% | |
GAATGGACAAGAACCCGTGT+AGG | - | chr5.3:3720549-3720568 | None:intergenic | 50.0% | |
GACCAAAGAGTGAAGTGGAG+GGG | + | chr5.3:3718949-3718968 | MS.gene072763:CDS | 50.0% | |
GCTTGGTTATACAAGGCCAG+TGG | + | chr5.3:3720713-3720732 | MS.gene072763:CDS | 50.0% | |
TGCTAATTCCCCTGGAACTG+AGG | + | chr5.3:3720311-3720330 | MS.gene072763:CDS | 50.0% | |
TGGCAGGTGAATTTGGTTGG+AGG | + | chr5.3:3719709-3719728 | MS.gene072763:intron | 50.0% | |
! | AACTGTTATGGGCTGCTGCT+TGG | + | chr5.3:3720696-3720715 | MS.gene072763:CDS | 50.0% |
! | GGCTGCTGCTTGGTTATACA+AGG | + | chr5.3:3720706-3720725 | MS.gene072763:CDS | 50.0% |
!! | CATGTGGGTGCTATTGTTGG+AGG | + | chr5.3:3721629-3721648 | MS.gene072763:CDS | 50.0% |
!! | TCATCAATGTTGGGAGCGTC+CGG | + | chr5.3:3720251-3720270 | MS.gene072763:CDS | 50.0% |
ACATGCCTGTGTGAAGAGCG+TGG | - | chr5.3:3719914-3719933 | None:intergenic | 55.0% | |
ACGCTGCCTGATTCCAACCT+TGG | - | chr5.3:3720772-3720791 | None:intergenic | 55.0% | |
CGCTCTTCACACAGGCATGT+TGG | + | chr5.3:3719914-3719933 | MS.gene072763:intron | 55.0% | |
CTCCCCTCCACTTCACTCTT+TGG | - | chr5.3:3718954-3718973 | None:intergenic | 55.0% | |
GGAGACTCAGCTCTCTCTGA+TGG | + | chr5.3:3718970-3718989 | MS.gene072763:CDS | 55.0% | |
TACCCCAACGAATAGCACGG+CGG | - | chr5.3:3719858-3719877 | None:intergenic | 55.0% | |
TCCAACCACGCTCTTCACAC+AGG | + | chr5.3:3719906-3719925 | MS.gene072763:CDS | 55.0% | |
! | ATCTCCGCCGTGCTATTCGT+TGG | + | chr5.3:3719851-3719870 | MS.gene072763:CDS | 55.0% |
! | TCTCCGCCGTGCTATTCGTT+GGG | + | chr5.3:3719852-3719871 | MS.gene072763:CDS | 55.0% |
!! | AGATTGAGAGAGGGGCACTG+AGG | - | chr5.3:3719591-3719610 | None:intergenic | 55.0% |
!! | ATTGAGAGAGGGGCACTGAG+GGG | - | chr5.3:3719589-3719608 | None:intergenic | 55.0% |
!! | GATTGAGAGAGGGGCACTGA+GGG | - | chr5.3:3719590-3719609 | None:intergenic | 55.0% |
AGCTGCAGCCTCAGTTCCAG+GGG | - | chr5.3:3720322-3720341 | None:intergenic | 60.0% | |
AGGCAGCGTCTGAGTTCAGC+TGG | + | chr5.3:3720783-3720802 | MS.gene072763:CDS | 60.0% | |
CAGCTGCAGCCTCAGTTCCA+GGG | - | chr5.3:3720323-3720342 | None:intergenic | 60.0% | |
GGCAGCGTCTGAGTTCAGCT+GGG | + | chr5.3:3720784-3720803 | MS.gene072763:CDS | 60.0% | |
TCAGCTGCAGCCTCAGTTCC+AGG | - | chr5.3:3720324-3720343 | None:intergenic | 60.0% | |
TGGAACTGAGGCTGCAGCTG+AGG | + | chr5.3:3720323-3720342 | MS.gene072763:CDS | 60.0% | |
! | CTCCGCCGTGCTATTCGTTG+GGG | + | chr5.3:3719853-3719872 | MS.gene072763:CDS | 60.0% |
! | GCCTGTGTGAAGAGCGTGGT+TGG | - | chr5.3:3719910-3719929 | None:intergenic | 60.0% |
!! | TTGGGAGCGTCCGGAAGACA+TGG | + | chr5.3:3720260-3720279 | MS.gene072763:CDS | 60.0% |
!! | AGAGAGGGGCACTGAGGGGT+TGG | - | chr5.3:3719585-3719604 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 3718802 | 3721784 | 3718802 | ID=MS.gene072763 |
chr5.3 | mRNA | 3718802 | 3721784 | 3718802 | ID=MS.gene072763.t1;Parent=MS.gene072763 |
chr5.3 | exon | 3718802 | 3719005 | 3718802 | ID=MS.gene072763.t1.exon1;Parent=MS.gene072763.t1 |
chr5.3 | CDS | 3718802 | 3719005 | 3718802 | ID=cds.MS.gene072763.t1;Parent=MS.gene072763.t1 |
chr5.3 | exon | 3719715 | 3719927 | 3719715 | ID=MS.gene072763.t1.exon2;Parent=MS.gene072763.t1 |
chr5.3 | CDS | 3719715 | 3719927 | 3719715 | ID=cds.MS.gene072763.t1;Parent=MS.gene072763.t1 |
chr5.3 | exon | 3720231 | 3720431 | 3720231 | ID=MS.gene072763.t1.exon3;Parent=MS.gene072763.t1 |
chr5.3 | CDS | 3720231 | 3720431 | 3720231 | ID=cds.MS.gene072763.t1;Parent=MS.gene072763.t1 |
chr5.3 | exon | 3720515 | 3720592 | 3720515 | ID=MS.gene072763.t1.exon4;Parent=MS.gene072763.t1 |
chr5.3 | CDS | 3720515 | 3720592 | 3720515 | ID=cds.MS.gene072763.t1;Parent=MS.gene072763.t1 |
chr5.3 | exon | 3720692 | 3720844 | 3720692 | ID=MS.gene072763.t1.exon5;Parent=MS.gene072763.t1 |
chr5.3 | CDS | 3720692 | 3720844 | 3720692 | ID=cds.MS.gene072763.t1;Parent=MS.gene072763.t1 |
chr5.3 | exon | 3720962 | 3721070 | 3720962 | ID=MS.gene072763.t1.exon6;Parent=MS.gene072763.t1 |
chr5.3 | CDS | 3720962 | 3721070 | 3720962 | ID=cds.MS.gene072763.t1;Parent=MS.gene072763.t1 |
chr5.3 | exon | 3721175 | 3721341 | 3721175 | ID=MS.gene072763.t1.exon7;Parent=MS.gene072763.t1 |
chr5.3 | CDS | 3721175 | 3721341 | 3721175 | ID=cds.MS.gene072763.t1;Parent=MS.gene072763.t1 |
chr5.3 | exon | 3721443 | 3721784 | 3721443 | ID=MS.gene072763.t1.exon8;Parent=MS.gene072763.t1 |
chr5.3 | CDS | 3721443 | 3721784 | 3721443 | ID=cds.MS.gene072763.t1;Parent=MS.gene072763.t1 |
Gene Sequence |
Protein sequence |