Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026232.t1 | XP_013466866.1 | 96.3 | 465 | 17 | 0 | 1 | 465 | 17 | 481 | 3.60E-267 | 930.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026232.t1 | O64890 | 63.1 | 464 | 169 | 2 | 1 | 463 | 25 | 487 | 2.2e-172 | 606.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026232.t1 | A0A072VGL9 | 96.3 | 465 | 17 | 0 | 1 | 465 | 17 | 481 | 2.6e-267 | 930.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026232.t1 | MTR_1g037340 | 96.344 | 465 | 17 | 0 | 1 | 465 | 17 | 481 | 0.0 | 938 |
MS.gene026232.t1 | MTR_8g099410 | 54.741 | 464 | 203 | 4 | 9 | 465 | 28 | 491 | 1.76e-180 | 515 |
MS.gene026232.t1 | MTR_8g099410 | 54.741 | 464 | 203 | 4 | 9 | 465 | 28 | 491 | 7.17e-179 | 515 |
MS.gene026232.t1 | MTR_4g074960 | 53.978 | 465 | 206 | 5 | 9 | 465 | 28 | 492 | 1.99e-173 | 501 |
MS.gene026232.t1 | MTR_5g085730 | 51.173 | 469 | 220 | 5 | 4 | 463 | 26 | 494 | 5.25e-173 | 496 |
MS.gene026232.t1 | MTR_3g080190 | 51.078 | 464 | 218 | 5 | 9 | 463 | 40 | 503 | 5.07e-170 | 489 |
MS.gene026232.t1 | MTR_5g093590 | 50.964 | 467 | 219 | 6 | 9 | 465 | 34 | 500 | 7.61e-165 | 474 |
MS.gene026232.t1 | MTR_3g080810 | 48.387 | 465 | 226 | 8 | 9 | 465 | 35 | 493 | 3.01e-147 | 430 |
MS.gene026232.t1 | MTR_8g104820 | 48.626 | 473 | 221 | 9 | 6 | 465 | 27 | 490 | 8.59e-144 | 421 |
MS.gene026232.t1 | MTR_3g117500 | 47.992 | 473 | 230 | 9 | 3 | 465 | 18 | 484 | 1.48e-142 | 417 |
MS.gene026232.t1 | MTR_5g009970 | 46.868 | 463 | 230 | 7 | 9 | 465 | 41 | 493 | 6.00e-142 | 416 |
MS.gene026232.t1 | MTR_5g010000 | 47.609 | 460 | 231 | 5 | 9 | 465 | 40 | 492 | 6.76e-142 | 416 |
MS.gene026232.t1 | MTR_4g035930 | 46.055 | 469 | 241 | 7 | 1 | 465 | 7 | 467 | 2.05e-140 | 411 |
MS.gene026232.t1 | MTR_3g010330 | 47.761 | 469 | 233 | 8 | 3 | 465 | 18 | 480 | 4.64e-139 | 408 |
MS.gene026232.t1 | MTR_4g035955 | 46.695 | 469 | 237 | 8 | 1 | 465 | 7 | 466 | 3.46e-138 | 405 |
MS.gene026232.t1 | MTR_3g105230 | 44.743 | 447 | 234 | 8 | 9 | 452 | 30 | 466 | 8.43e-131 | 387 |
MS.gene026232.t1 | MTR_1g088190 | 46.497 | 471 | 219 | 9 | 4 | 466 | 34 | 479 | 1.92e-130 | 386 |
MS.gene026232.t1 | MTR_4g035975 | 45.011 | 471 | 237 | 9 | 9 | 465 | 27 | 489 | 6.91e-127 | 377 |
MS.gene026232.t1 | MTR_3g113720 | 43.710 | 469 | 243 | 10 | 10 | 465 | 58 | 518 | 1.50e-124 | 373 |
MS.gene026232.t1 | MTR_3g023740 | 44.685 | 461 | 242 | 8 | 9 | 466 | 30 | 480 | 1.64e-124 | 371 |
MS.gene026232.t1 | MTR_5g009970 | 45.131 | 421 | 215 | 7 | 51 | 465 | 9 | 419 | 1.10e-120 | 359 |
MS.gene026232.t1 | MTR_8g075990 | 42.735 | 468 | 249 | 9 | 10 | 465 | 64 | 524 | 9.95e-115 | 348 |
MS.gene026232.t1 | MTR_5g009970 | 43.781 | 402 | 210 | 7 | 70 | 465 | 1 | 392 | 8.37e-109 | 328 |
MS.gene026232.t1 | MTR_2g028480 | 40.650 | 492 | 244 | 14 | 9 | 465 | 111 | 589 | 5.47e-91 | 289 |
MS.gene026232.t1 | MTR_3g090540 | 36.511 | 493 | 273 | 16 | 3 | 465 | 101 | 583 | 1.42e-86 | 277 |
MS.gene026232.t1 | MTR_3g082440 | 38.193 | 487 | 260 | 16 | 9 | 465 | 116 | 591 | 1.44e-83 | 270 |
MS.gene026232.t1 | MTR_5g009970 | 45.210 | 334 | 167 | 7 | 138 | 465 | 1 | 324 | 1.64e-81 | 255 |
MS.gene026232.t1 | MTR_1g037320 | 80.000 | 160 | 32 | 0 | 70 | 229 | 1 | 160 | 1.30e-79 | 249 |
MS.gene026232.t1 | MTR_1g037320 | 77.419 | 124 | 28 | 0 | 340 | 463 | 166 | 289 | 3.68e-65 | 212 |
MS.gene026232.t1 | MTR_1g088190 | 46.815 | 314 | 136 | 7 | 4 | 310 | 34 | 323 | 3.09e-75 | 239 |
MS.gene026232.t1 | MTR_4g047570 | 71.681 | 113 | 12 | 2 | 252 | 363 | 1 | 94 | 1.47e-43 | 149 |
MS.gene026232.t1 | MTR_7g108925 | 43.452 | 168 | 92 | 3 | 301 | 466 | 33 | 199 | 1.74e-41 | 147 |
MS.gene026232.t1 | MTR_0393s0050 | 46.377 | 138 | 72 | 2 | 310 | 445 | 19 | 156 | 1.29e-35 | 130 |
MS.gene026232.t1 | MTR_4g128810 | 28.897 | 263 | 155 | 7 | 205 | 465 | 101 | 333 | 1.04e-20 | 94.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026232.t1 | AT2G44570 | 63.913 | 460 | 164 | 2 | 6 | 463 | 30 | 489 | 0.0 | 598 |
MS.gene026232.t1 | AT2G44550 | 62.876 | 466 | 171 | 2 | 1 | 465 | 25 | 489 | 0.0 | 591 |
MS.gene026232.t1 | AT2G44540 | 61.638 | 464 | 177 | 1 | 1 | 463 | 25 | 488 | 0.0 | 582 |
MS.gene026232.t1 | AT2G44560 | 62.284 | 464 | 174 | 1 | 1 | 463 | 25 | 488 | 0.0 | 570 |
MS.gene026232.t1 | AT1G64390 | 55.603 | 464 | 199 | 4 | 9 | 465 | 25 | 488 | 0.0 | 525 |
MS.gene026232.t1 | AT4G11050 | 54.915 | 468 | 204 | 4 | 5 | 465 | 22 | 489 | 0.0 | 520 |
MS.gene026232.t1 | AT4G11050 | 54.915 | 468 | 204 | 4 | 5 | 465 | 22 | 489 | 0.0 | 520 |
MS.gene026232.t1 | AT4G11050 | 54.915 | 468 | 204 | 4 | 5 | 465 | 22 | 489 | 0.0 | 518 |
MS.gene026232.t1 | AT2G32990 | 50.746 | 469 | 222 | 5 | 4 | 463 | 34 | 502 | 7.17e-169 | 486 |
MS.gene026232.t1 | AT2G44570 | 60.695 | 374 | 146 | 1 | 6 | 378 | 30 | 403 | 9.37e-160 | 458 |
MS.gene026232.t1 | AT1G02800 | 50.746 | 469 | 218 | 7 | 3 | 465 | 37 | 498 | 1.54e-154 | 448 |
MS.gene026232.t1 | AT1G48930 | 50.968 | 465 | 215 | 5 | 9 | 463 | 30 | 491 | 1.59e-154 | 453 |
MS.gene026232.t1 | AT1G23210 | 50.000 | 470 | 216 | 8 | 6 | 465 | 25 | 485 | 5.80e-150 | 436 |
MS.gene026232.t1 | AT1G70710 | 49.574 | 470 | 218 | 8 | 6 | 465 | 25 | 485 | 9.68e-146 | 426 |
MS.gene026232.t1 | AT4G02290 | 49.145 | 468 | 225 | 8 | 5 | 465 | 48 | 509 | 7.69e-145 | 424 |
MS.gene026232.t1 | AT1G71380 | 47.957 | 465 | 230 | 8 | 6 | 465 | 21 | 478 | 1.52e-139 | 409 |
MS.gene026232.t1 | AT4G23560 | 47.752 | 467 | 233 | 6 | 2 | 465 | 16 | 474 | 1.93e-139 | 409 |
MS.gene026232.t1 | AT4G09740 | 47.323 | 467 | 235 | 6 | 2 | 465 | 16 | 474 | 3.79e-137 | 403 |
MS.gene026232.t1 | AT4G39010 | 47.021 | 470 | 228 | 11 | 9 | 465 | 29 | 490 | 2.87e-136 | 402 |
MS.gene026232.t1 | AT3G43860 | 46.822 | 472 | 235 | 8 | 2 | 466 | 22 | 484 | 7.82e-136 | 400 |
MS.gene026232.t1 | AT3G43860 | 46.822 | 472 | 235 | 8 | 2 | 466 | 22 | 484 | 7.82e-136 | 400 |
MS.gene026232.t1 | AT1G22880 | 46.781 | 466 | 236 | 8 | 6 | 466 | 21 | 479 | 7.83e-136 | 400 |
MS.gene026232.t1 | AT1G19940 | 46.957 | 460 | 229 | 9 | 9 | 460 | 48 | 500 | 2.46e-133 | 395 |
MS.gene026232.t1 | AT1G19940 | 46.957 | 460 | 229 | 9 | 9 | 460 | 48 | 500 | 2.46e-133 | 395 |
MS.gene026232.t1 | AT1G75680 | 45.111 | 450 | 234 | 8 | 10 | 452 | 58 | 501 | 3.36e-121 | 364 |
MS.gene026232.t1 | AT4G39000 | 45.648 | 471 | 233 | 12 | 9 | 465 | 25 | 486 | 7.34e-121 | 362 |
MS.gene026232.t1 | AT4G38990 | 45.625 | 480 | 225 | 15 | 9 | 465 | 23 | 489 | 3.72e-120 | 360 |
MS.gene026232.t1 | AT4G02290 | 46.040 | 404 | 205 | 8 | 70 | 466 | 1 | 398 | 1.45e-110 | 333 |
MS.gene026232.t1 | AT1G22880 | 44.527 | 402 | 211 | 8 | 70 | 466 | 1 | 395 | 9.99e-109 | 328 |
MS.gene026232.t1 | AT4G39010 | 45.257 | 369 | 177 | 10 | 9 | 362 | 29 | 387 | 6.37e-99 | 302 |
MS.gene026232.t1 | AT1G19940 | 46.133 | 362 | 186 | 6 | 9 | 363 | 48 | 407 | 8.98e-99 | 303 |
MS.gene026232.t1 | AT5G49720 | 39.837 | 492 | 248 | 17 | 9 | 465 | 108 | 586 | 3.78e-84 | 271 |
MS.gene026232.t1 | AT1G22880 | 48.544 | 309 | 150 | 5 | 6 | 311 | 21 | 323 | 9.88e-83 | 259 |
MS.gene026232.t1 | AT4G24260 | 39.228 | 492 | 251 | 16 | 9 | 465 | 108 | 586 | 1.31e-82 | 267 |
MS.gene026232.t1 | AT1G65610 | 37.500 | 488 | 261 | 16 | 9 | 465 | 116 | 590 | 4.99e-81 | 263 |
MS.gene026232.t1 | AT4G38990 | 44.789 | 355 | 161 | 10 | 1 | 347 | 15 | 342 | 1.09e-80 | 254 |
MS.gene026232.t1 | AT4G24260 | 39.118 | 363 | 180 | 13 | 9 | 338 | 108 | 462 | 2.79e-50 | 178 |
MS.gene026232.t1 | AT4G24260 | 42.561 | 289 | 136 | 9 | 9 | 271 | 108 | 392 | 5.41e-49 | 174 |
Find 99 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGTGGAGTCTTCTGGTATT+TGG | 0.150871 | 1.1:-21913672 | MS.gene026232:CDS |
ATTGCTCCATCCAATGTATT+AGG | 0.167009 | 1.1:+21912840 | None:intergenic |
ATGCATTAGCAGCCATAAAA+TGG | 0.203841 | 1.1:-21915032 | MS.gene026232:CDS |
TGCTGAAACTGCTGCTGCTT+TGG | 0.209306 | 1.1:-21914848 | MS.gene026232:CDS |
ACCATATAACTCATTTGTTT+TGG | 0.252912 | 1.1:+21912993 | None:intergenic |
CTGTAGTTGGCTCTCCTAAT+TGG | 0.258505 | 1.1:+21912769 | None:intergenic |
TTTATAGGTGGACTTCATAT+TGG | 0.266572 | 1.1:-21913024 | MS.gene026232:intron |
AATAGGAATGATTTCCAATT+AGG | 0.285802 | 1.1:-21912783 | MS.gene026232:CDS |
AGTGGAGTCTTCTGGTATTT+GGG | 0.295567 | 1.1:-21913671 | MS.gene026232:CDS |
TGTTGCATGAACTAGCATTT+TGG | 0.307097 | 1.1:+21914780 | None:intergenic |
GTTGGTGTTCTTGCTTATCT+AGG | 0.309346 | 1.1:-21912729 | MS.gene026232:CDS |
CAACACCTAGGAATTCTTAT+AGG | 0.310428 | 1.1:-21914903 | MS.gene026232:CDS |
GATGGGGCAGTGGAGTCTTC+TGG | 0.317246 | 1.1:-21913679 | MS.gene026232:CDS |
TCCAAAACAAATGAGTTATA+TGG | 0.317497 | 1.1:-21912994 | MS.gene026232:CDS |
TTGCTCCATCCAATGTATTA+GGG | 0.330211 | 1.1:+21912841 | None:intergenic |
ACAAACAGGATGAATTACTA+TGG | 0.338358 | 1.1:-21913961 | MS.gene026232:intron |
ATATTCCAGCAGCGGATATA+AGG | 0.356670 | 1.1:-21914314 | MS.gene026232:intron |
CCATCCAATGTATTAGGGTT+TGG | 0.362477 | 1.1:+21912846 | None:intergenic |
ATTTCTCCATACAAAACATT+TGG | 0.377809 | 1.1:+21914976 | None:intergenic |
TTATAGGTGGACTTCATATT+GGG | 0.379942 | 1.1:-21913023 | MS.gene026232:intron |
AAACACCAGGAGGTTTGTTA+TGG | 0.384236 | 1.1:-21913579 | MS.gene026232:CDS |
AATGTTGCTTGTGCTGATTA+TGG | 0.385786 | 1.1:-21915769 | MS.gene026232:CDS |
CTTAAAGATGGCCAAGATGC+TGG | 0.392573 | 1.1:-21915652 | MS.gene026232:CDS |
TGCATTAGCAGCCATAAAAT+GGG | 0.401006 | 1.1:-21915031 | MS.gene026232:CDS |
GTGCAAGAACAATGTTTAGT+TGG | 0.403821 | 1.1:-21913862 | MS.gene026232:CDS |
AGTTGGGATGACAAGTATCT+TGG | 0.409837 | 1.1:-21913845 | MS.gene026232:CDS |
GTTTCTGTTGCACCTTTAGT+TGG | 0.414736 | 1.1:-21912747 | MS.gene026232:CDS |
GTTTGTTATGGTTTCAGCCA+TGG | 0.423349 | 1.1:-21913567 | MS.gene026232:CDS |
TGCAAGAACAATGTTTAGTT+GGG | 0.447959 | 1.1:-21913861 | MS.gene026232:CDS |
TTTGTTATGGTTTCAGCCAT+GGG | 0.452840 | 1.1:-21913566 | MS.gene026232:CDS |
CTCCATGTTACTCTCTGGTT+AGG | 0.455018 | 1.1:+21915688 | None:intergenic |
CCCCTCTCCATGTTACTCTC+TGG | 0.456953 | 1.1:+21915683 | None:intergenic |
CTCGATTACCTTGGAGGAGC+CGG | 0.462880 | 1.1:-21913896 | MS.gene026232:CDS |
TACTATTGTGGTATAAGCCT+TGG | 0.463657 | 1.1:+21914356 | None:intergenic |
CACATCTCTTGTTCAAGCTC+AGG | 0.464765 | 1.1:-21913428 | MS.gene026232:intron |
CAACACCACTACTACATTGA+AGG | 0.467522 | 1.1:+21913467 | None:intergenic |
TGCACCAAACCCTAATACAT+TGG | 0.468229 | 1.1:-21912850 | MS.gene026232:CDS |
GCTGGAGACAATTTGAAGCT+AGG | 0.474008 | 1.1:-21915141 | MS.gene026232:CDS |
AGTAATTTACCCCAGCATCT+TGG | 0.479746 | 1.1:+21915641 | None:intergenic |
CTTGGAGGAGCCGGCGACAA+TGG | 0.487274 | 1.1:-21913887 | MS.gene026232:CDS |
TTACAACAACAATGCTATCA+TGG | 0.493153 | 1.1:-21915104 | MS.gene026232:CDS |
CAACATTGATGATCTGAGTC+AGG | 0.495400 | 1.1:+21914946 | None:intergenic |
ATGAGTTATATGGTGGGGTA+TGG | 0.498004 | 1.1:-21912984 | MS.gene026232:CDS |
AAATACCTCGATTACCTTGG+AGG | 0.498433 | 1.1:-21913902 | MS.gene026232:CDS |
TCACCAGTGGGATGCAAAGA+TGG | 0.498520 | 1.1:-21912897 | MS.gene026232:CDS |
CTAGGTGTTGACATATCCTC+TGG | 0.498608 | 1.1:+21914916 | None:intergenic |
TTAAAGATGGCCAAGATGCT+GGG | 0.499862 | 1.1:-21915651 | MS.gene026232:CDS |
GTTGGAGGATATTATGATGC+TGG | 0.501561 | 1.1:-21915159 | MS.gene026232:CDS |
ACAAGAGATGTGAGATCAGA+AGG | 0.503193 | 1.1:+21913439 | None:intergenic |
TGCACAAATTCTTGCTGCAA+AGG | 0.510148 | 1.1:-21913822 | MS.gene026232:intron |
CCAAACCCTAATACATTGGA+TGG | 0.511682 | 1.1:-21912846 | MS.gene026232:CDS |
CATGTTACTCTCTGGTTAGG+AGG | 0.516741 | 1.1:+21915691 | None:intergenic |
CATTGTCGCCGGCTCCTCCA+AGG | 0.518707 | 1.1:+21913888 | None:intergenic |
ATTGTTGTTGTAAATGCCAT+TGG | 0.519034 | 1.1:+21915114 | None:intergenic |
CTGCTGGTGGGATACTATTG+TGG | 0.519945 | 1.1:+21914344 | None:intergenic |
AGACAAATATTGAGAATAAG+TGG | 0.523131 | 1.1:+21913504 | None:intergenic |
AGGATTGATGAACAACATCC+TGG | 0.527890 | 1.1:-21914883 | MS.gene026232:CDS |
GTCAACAGATTGAAAAGCAA+TGG | 0.528440 | 1.1:+21914816 | None:intergenic |
GATCACCTTATATCCGCTGC+TGG | 0.531376 | 1.1:+21914309 | None:intergenic |
TCAATCCTATAAGAATTCCT+AGG | 0.537494 | 1.1:+21914898 | None:intergenic |
CATCATAATATCCTCCAACT+AGG | 0.538036 | 1.1:+21915163 | None:intergenic |
CATGTGCAGATTGACCTAGT+TGG | 0.539382 | 1.1:-21915177 | MS.gene026232:intron |
CCTCTATGATGAATTTGTTG+TGG | 0.545265 | 1.1:+21912951 | None:intergenic |
AAGCCATCTTTGCATCCCAC+TGG | 0.547694 | 1.1:+21912894 | None:intergenic |
AAAACAAATGAGTTATATGG+TGG | 0.550740 | 1.1:-21912991 | MS.gene026232:CDS |
AACACCACTACTACATTGAA+GGG | 0.556342 | 1.1:+21913468 | None:intergenic |
TCAGCAGCAAGATCAGAGCC+AGG | 0.559234 | 1.1:+21914865 | None:intergenic |
GGGGATTCTGCACTTAAAGA+TGG | 0.560127 | 1.1:-21915664 | MS.gene026232:CDS |
CTGACTCAGATCATCAATGT+TGG | 0.570776 | 1.1:-21914945 | MS.gene026232:CDS |
TAAGCAAGAACACCAACTAA+AGG | 0.577826 | 1.1:+21912735 | None:intergenic |
AACAAATGAGTTATATGGTG+GGG | 0.577963 | 1.1:-21912989 | MS.gene026232:CDS |
ACCAGAGAGTAACATGGAGA+GGG | 0.579071 | 1.1:-21915684 | MS.gene026232:CDS |
TCTTGCACCTCCATTGTCGC+CGG | 0.579248 | 1.1:+21913877 | None:intergenic |
GGTGCAACAGAAACTGTAGT+TGG | 0.581151 | 1.1:+21912756 | None:intergenic |
GTGCAGATTGACCTAGTTGG+AGG | 0.584135 | 1.1:-21915174 | MS.gene026232:intron |
ATAGAGTTCAAAGACCAACT+TGG | 0.584442 | 1.1:-21915075 | MS.gene026232:CDS |
CCACAACAAATTCATCATAG+AGG | 0.584665 | 1.1:-21912951 | MS.gene026232:CDS |
CAAACAGGATGAATTACTAT+GGG | 0.588140 | 1.1:-21913960 | MS.gene026232:intron |
AAACAAATGAGTTATATGGT+GGG | 0.588315 | 1.1:-21912990 | MS.gene026232:CDS |
AATTACTATGGGCAGCAGCA+TGG | 0.593166 | 1.1:-21913949 | MS.gene026232:CDS |
TGAAACCATAACAAACCTCC+TGG | 0.599556 | 1.1:+21913574 | None:intergenic |
GGAGGAGCCGGCGACAATGG+AGG | 0.601885 | 1.1:-21913884 | MS.gene026232:CDS |
ACATATTGATTATTACCCCA+TGG | 0.605665 | 1.1:+21913550 | None:intergenic |
GCTTCCCTTCAATGTAGTAG+TGG | 0.617577 | 1.1:-21913472 | MS.gene026232:CDS |
AACCAGAGAGTAACATGGAG+AGG | 0.618242 | 1.1:-21915685 | MS.gene026232:CDS |
CAAGAGATGTGAGATCAGAA+GGG | 0.623937 | 1.1:+21913440 | None:intergenic |
CAAAACTTTCAGAAAACACC+AGG | 0.624764 | 1.1:-21913592 | MS.gene026232:CDS |
TAAAGATGGCCAAGATGCTG+GGG | 0.633585 | 1.1:-21915650 | MS.gene026232:intron |
AAACAAGATAGTTCACCAGT+GGG | 0.648114 | 1.1:-21912909 | MS.gene026232:CDS |
GCAAAAGTATATTCCAGCAG+CGG | 0.651043 | 1.1:-21914322 | MS.gene026232:CDS |
CAAACAAGATAGTTCACCAG+TGG | 0.655015 | 1.1:-21912910 | MS.gene026232:CDS |
AACTTTCAGAAAACACCAGG+AGG | 0.662576 | 1.1:-21913589 | MS.gene026232:CDS |
CGGCTCCTCCAAGGTAATCG+AGG | 0.662604 | 1.1:+21913897 | None:intergenic |
TTGTTATGGTTTCAGCCATG+GGG | 0.671553 | 1.1:-21913565 | MS.gene026232:CDS |
CTCCTAACCAGAGAGTAACA+TGG | 0.672461 | 1.1:-21915690 | MS.gene026232:CDS |
GCATTAGCAGCCATAAAATG+GGG | 0.674675 | 1.1:-21915030 | MS.gene026232:CDS |
CAGAGGATATGTCAACACCT+AGG | 0.678701 | 1.1:-21914915 | MS.gene026232:CDS |
TCAATGTTGGCAAAGACCAG+AGG | 0.679190 | 1.1:-21914932 | MS.gene026232:CDS |
CCAGAGAGTAACATGGAGAG+GGG | 0.683701 | 1.1:-21915683 | MS.gene026232:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGAAGAAAAAAAATTAAATA+AGG | - | chr1.1:21914005-21914024 | MS.gene026232:intron | 10.0% |
!!! | AGATTATTATATTTTTTGTT+TGG | - | chr1.1:21914072-21914091 | MS.gene026232:intron | 10.0% |
!! | GAAAGGAAAAAAAATATTTA+AGG | - | chr1.1:21914436-21914455 | MS.gene026232:intron | 15.0% |
!! | TTTGAATAAAATGTTTCTTA+TGG | + | chr1.1:21913293-21913312 | None:intergenic | 15.0% |
!!! | AAAAAGTTTGTTATTTTTTG+AGG | - | chr1.1:21912769-21912788 | MS.gene026232:CDS | 15.0% |
!!! | AAAAGTTTGTTATTTTTTGA+GGG | - | chr1.1:21912770-21912789 | MS.gene026232:CDS | 15.0% |
!!! | AAACATTATATTAGTGTTTT+AGG | + | chr1.1:21914473-21914492 | None:intergenic | 15.0% |
!!! | AACAATATTTTCAATATAGA+TGG | + | chr1.1:21914734-21914753 | None:intergenic | 15.0% |
!!! | ATATTTTTTATTACTTTTGG+TGG | - | chr1.1:21913110-21913129 | MS.gene026232:intron | 15.0% |
!!! | TAAATAGAAATTTTGTCAAT+TGG | - | chr1.1:21915191-21915210 | MS.gene026232:intron | 15.0% |
!!! | TTCATAATTTGTTTAATAGA+TGG | + | chr1.1:21914247-21914266 | None:intergenic | 15.0% |
!! | AACTTGAAAATAGATTATGA+TGG | + | chr1.1:21915110-21915129 | None:intergenic | 20.0% |
!! | AATAAATTTCAAATCCCATA+AGG | + | chr1.1:21914519-21914538 | None:intergenic | 20.0% |
!! | TAAAATGAAGGAAAATTCAA+AGG | + | chr1.1:21912911-21912930 | None:intergenic | 20.0% |
!! | TGAAATTTATTTGTACAAAC+AGG | - | chr1.1:21914528-21914547 | MS.gene026232:intron | 20.0% |
!! | TTCATGTGTTTAATGTTTAT+AGG | - | chr1.1:21915464-21915483 | MS.gene026232:intron | 20.0% |
!!! | AAACGATATTCATTTTGAAA+TGG | - | chr1.1:21915416-21915435 | MS.gene026232:intron | 20.0% |
!!! | AGATCAAAATGATGATTTTA+CGG | - | chr1.1:21915695-21915714 | MS.gene026232:CDS | 20.0% |
!!! | AGTTTTACCATTTAAACTTA+AGG | - | chr1.1:21915126-21915145 | MS.gene026232:CDS | 20.0% |
!!! | CATTTTCCTTAAAATTAATG+AGG | - | chr1.1:21915316-21915335 | MS.gene026232:intron | 20.0% |
!!! | GAAAATTCAAAGGTATAAAA+AGG | + | chr1.1:21912901-21912920 | None:intergenic | 20.0% |
!!! | TTCTAACCTCATTAATTTTA+AGG | + | chr1.1:21915325-21915344 | None:intergenic | 20.0% |
! | AAAACAAATGAGTTATATGG+TGG | - | chr1.1:21915512-21915531 | MS.gene026232:intron | 25.0% |
! | AAACAAATGAGTTATATGGT+GGG | - | chr1.1:21915513-21915532 | MS.gene026232:intron | 25.0% |
! | AATAGGAATGATTTCCAATT+AGG | - | chr1.1:21915720-21915739 | MS.gene026232:CDS | 25.0% |
! | AGACAAATATTGAGAATAAG+TGG | + | chr1.1:21915002-21915021 | None:intergenic | 25.0% |
! | ATGGAAATATAGAAGTTGAA+AGG | + | chr1.1:21914228-21914247 | None:intergenic | 25.0% |
! | ATGTGTTTAATGTTTATAGG+TGG | - | chr1.1:21915467-21915486 | MS.gene026232:intron | 25.0% |
! | ATTTCTCCATACAAAACATT+TGG | + | chr1.1:21913530-21913549 | None:intergenic | 25.0% |
! | TCACACATCATATAAACAAA+TGG | + | chr1.1:21913887-21913906 | None:intergenic | 25.0% |
! | TCCAAAACAAATGAGTTATA+TGG | - | chr1.1:21915509-21915528 | MS.gene026232:intron | 25.0% |
!! | AATGTTTTGTATGGAGAAAT+TGG | - | chr1.1:21913530-21913549 | MS.gene026232:CDS | 25.0% |
!! | ACCATATAACTCATTTGTTT+TGG | + | chr1.1:21915513-21915532 | None:intergenic | 25.0% |
!! | ATGATGATTTTACGGATAAT+AGG | - | chr1.1:21915703-21915722 | MS.gene026232:CDS | 25.0% |
!! | ATTTTCAATATAGATGGAAG+AGG | + | chr1.1:21914728-21914747 | None:intergenic | 25.0% |
!! | GCATTTTCGTTATAAAATGA+AGG | + | chr1.1:21912923-21912942 | None:intergenic | 25.0% |
!!! | ATTTTGATTGATGTTTGTCA+TGG | - | chr1.1:21914297-21914316 | MS.gene026232:intron | 25.0% |
!!! | CTATTAGTCTTTGAATCATT+AGG | + | chr1.1:21914362-21914381 | None:intergenic | 25.0% |
!!! | GTAAAATCATCATTTTGATC+TGG | + | chr1.1:21915696-21915715 | None:intergenic | 25.0% |
!!! | TAATGTAGCTTGTTTTAGAT+GGG | - | chr1.1:21914807-21914826 | MS.gene026232:CDS | 25.0% |
!!! | TTAATGTAGCTTGTTTTAGA+TGG | - | chr1.1:21914806-21914825 | MS.gene026232:CDS | 25.0% |
AAAAAATACCTCGATTACCT+TGG | - | chr1.1:21914598-21914617 | MS.gene026232:intron | 30.0% | |
AACAAATGAGTTATATGGTG+GGG | - | chr1.1:21915514-21915533 | MS.gene026232:intron | 30.0% | |
ACAAACAGGATGAATTACTA+TGG | - | chr1.1:21914542-21914561 | MS.gene026232:intron | 30.0% | |
AGAAACCTGATACATGATAA+AGG | + | chr1.1:21912973-21912992 | None:intergenic | 30.0% | |
AGCATGACCTTAAGTTTAAA+TGG | + | chr1.1:21915136-21915155 | None:intergenic | 30.0% | |
ATAACTATTGTGAGTTCGAA+AGG | - | chr1.1:21914419-21914438 | MS.gene026232:intron | 30.0% | |
ATGAACCTTTATCATGTATC+AGG | - | chr1.1:21912965-21912984 | MS.gene026232:CDS | 30.0% | |
CAAACAGGATGAATTACTAT+GGG | - | chr1.1:21914543-21914562 | MS.gene026232:intron | 30.0% | |
CAAACTAAAACATAGAGCTT+TGG | - | chr1.1:21913056-21913075 | MS.gene026232:intron | 30.0% | |
TCAATCCTATAAGAATTCCT+AGG | + | chr1.1:21913608-21913627 | None:intergenic | 30.0% | |
TGCAAGAACAATGTTTAGTT+GGG | - | chr1.1:21914642-21914661 | MS.gene026232:intron | 30.0% | |
TTACAACAACAATGCTATCA+TGG | - | chr1.1:21913399-21913418 | MS.gene026232:intron | 30.0% | |
TTTGTCATGGTTAGAATGAT+CGG | - | chr1.1:21914310-21914329 | MS.gene026232:intron | 30.0% | |
! | ACATATTGATTATTACCCCA+TGG | + | chr1.1:21914956-21914975 | None:intergenic | 30.0% |
! | ATTGTTGTTGTAAATGCCAT+TGG | + | chr1.1:21913392-21913411 | None:intergenic | 30.0% |
! | CAACAACCAAATGTTTTGTA+TGG | - | chr1.1:21913521-21913540 | MS.gene026232:CDS | 30.0% |
! | GATTTTGCAAACAATAACCA+AGG | - | chr1.1:21914130-21914149 | MS.gene026232:intron | 30.0% |
! | TTAGTCTTTGAATCATTAGG+AGG | + | chr1.1:21914359-21914378 | None:intergenic | 30.0% |
! | TTATAGGTGGACTTCATATT+GGG | - | chr1.1:21915480-21915499 | MS.gene026232:intron | 30.0% |
! | TTTATAGGTGGACTTCATAT+TGG | - | chr1.1:21915479-21915498 | MS.gene026232:intron | 30.0% |
!! | AAAACATAGAGCTTTGGTTT+TGG | - | chr1.1:21913062-21913081 | MS.gene026232:intron | 30.0% |
!! | TGGTGTTTTCTGAAAGTTTT+GGG | + | chr1.1:21914912-21914931 | None:intergenic | 30.0% |
!!! | AATGTAGCTTGTTTTAGATG+GGG | - | chr1.1:21914808-21914827 | MS.gene026232:CDS | 30.0% |
!!! | ATTTTTTCAAGTTTGTAGCG+CGG | + | chr1.1:21914585-21914604 | None:intergenic | 30.0% |
AAACAAGATAGTTCACCAGT+GGG | - | chr1.1:21915594-21915613 | MS.gene026232:intron | 35.0% | |
AACACCACTACTACATTGAA+GGG | + | chr1.1:21915038-21915057 | None:intergenic | 35.0% | |
AGACTAATAGAGATACCTTG+AGG | - | chr1.1:21914372-21914391 | MS.gene026232:CDS | 35.0% | |
ATAACCTAGACGAACAAAGA+CGG | + | chr1.1:21913245-21913264 | None:intergenic | 35.0% | |
ATAACGAAAATGCAGAAGAC+TGG | - | chr1.1:21912930-21912949 | MS.gene026232:CDS | 35.0% | |
ATACCTTGAGGAACATATTG+TGG | - | chr1.1:21914384-21914403 | MS.gene026232:intron | 35.0% | |
ATAGAGTTCAAAGACCAACT+TGG | - | chr1.1:21913428-21913447 | MS.gene026232:intron | 35.0% | |
ATATAATCTCATACAGCCCT+AGG | + | chr1.1:21913001-21913020 | None:intergenic | 35.0% | |
ATCAGGTTTCTAAGTTCCTA+GGG | - | chr1.1:21912982-21913001 | MS.gene026232:CDS | 35.0% | |
ATGCATTAGCAGCCATAAAA+TGG | - | chr1.1:21913471-21913490 | MS.gene026232:CDS | 35.0% | |
ATTGCTCCATCCAATGTATT+AGG | + | chr1.1:21915666-21915685 | None:intergenic | 35.0% | |
CAAAACTTTCAGAAAACACC+AGG | - | chr1.1:21914911-21914930 | MS.gene026232:CDS | 35.0% | |
CAACACCTAGGAATTCTTAT+AGG | - | chr1.1:21913600-21913619 | MS.gene026232:CDS | 35.0% | |
CATCATAATATCCTCCAACT+AGG | + | chr1.1:21913343-21913362 | None:intergenic | 35.0% | |
CCACAACAAATTCATCATAG+AGG | - | chr1.1:21915552-21915571 | MS.gene026232:intron | 35.0% | |
GTCAACAGATTGAAAAGCAA+TGG | + | chr1.1:21913690-21913709 | None:intergenic | 35.0% | |
GTGCAAGAACAATGTTTAGT+TGG | - | chr1.1:21914641-21914660 | MS.gene026232:intron | 35.0% | |
TAAGCAAGAACACCAACTAA+AGG | + | chr1.1:21915771-21915790 | None:intergenic | 35.0% | |
TACCTTGAGGAACATATTGT+GGG | - | chr1.1:21914385-21914404 | MS.gene026232:intron | 35.0% | |
TACTATTGTGGTATAAGCCT+TGG | + | chr1.1:21914150-21914169 | None:intergenic | 35.0% | |
TAGTTCATGCAACACAAGTA+TGG | - | chr1.1:21913732-21913751 | MS.gene026232:intron | 35.0% | |
TATCAGGTTTCTAAGTTCCT+AGG | - | chr1.1:21912981-21913000 | MS.gene026232:CDS | 35.0% | |
TGCATTAGCAGCCATAAAAT+GGG | - | chr1.1:21913472-21913491 | MS.gene026232:CDS | 35.0% | |
TTGCTCCATCCAATGTATTA+GGG | + | chr1.1:21915665-21915684 | None:intergenic | 35.0% | |
! | AATATACTTTTGCTGCTGGT+GGG | + | chr1.1:21914174-21914193 | None:intergenic | 35.0% |
! | AGTTTTTCTGCCTTATAGCT+AGG | - | chr1.1:21915368-21915387 | MS.gene026232:intron | 35.0% |
! | GTTTTTCTGCCTTATAGCTA+GGG | - | chr1.1:21915369-21915388 | MS.gene026232:intron | 35.0% |
! | TGTTGCATGAACTAGCATTT+TGG | + | chr1.1:21913726-21913745 | None:intergenic | 35.0% |
! | TTTGTTATGGTTTCAGCCAT+GGG | - | chr1.1:21914937-21914956 | MS.gene026232:CDS | 35.0% |
!! | AATGTTGCTTGTGCTGATTA+TGG | - | chr1.1:21912734-21912753 | MS.gene026232:CDS | 35.0% |
!! | CCTCTATGATGAATTTGTTG+TGG | + | chr1.1:21915555-21915574 | None:intergenic | 35.0% |
!! | CTGGTGTTTTCTGAAAGTTT+TGG | + | chr1.1:21914913-21914932 | None:intergenic | 35.0% |
!! | GCAAAGATGGCTTTGAAAAA+TGG | - | chr1.1:21915619-21915638 | MS.gene026232:intron | 35.0% |
!! | TTTGAAGCTAGGTTTTCCAA+TGG | - | chr1.1:21913373-21913392 | MS.gene026232:intron | 35.0% |
!!! | GCTCATTCTTTTTTCCAAGT+TGG | + | chr1.1:21913445-21913464 | None:intergenic | 35.0% |
AAACAAATGGTGTGTGAGTG+TGG | + | chr1.1:21913874-21913893 | None:intergenic | 40.0% | |
AAAGACGCACTGTATATAGG+CGG | + | chr1.1:21913200-21913219 | None:intergenic | 40.0% | |
AAATACCTCGATTACCTTGG+AGG | - | chr1.1:21914601-21914620 | MS.gene026232:intron | 40.0% | |
AACCCACAATATGTTCCTCA+AGG | + | chr1.1:21914390-21914409 | None:intergenic | 40.0% | |
AACTTTCAGAAAACACCAGG+AGG | - | chr1.1:21914914-21914933 | MS.gene026232:CDS | 40.0% | |
ACAAGAGATGTGAGATCAGA+AGG | + | chr1.1:21915067-21915086 | None:intergenic | 40.0% | |
ACACTTCCATTTGAGCCTTA+TGG | - | chr1.1:21914501-21914520 | MS.gene026232:intron | 40.0% | |
AGGATTGATGAACAACATCC+TGG | - | chr1.1:21913620-21913639 | MS.gene026232:CDS | 40.0% | |
AGTAATTTACCCCAGCATCT+TGG | + | chr1.1:21912865-21912884 | None:intergenic | 40.0% | |
AGTGGAGTCTTCTGGTATTT+GGG | - | chr1.1:21914832-21914851 | MS.gene026232:CDS | 40.0% | |
AGTTGGGATGACAAGTATCT+TGG | - | chr1.1:21914658-21914677 | MS.gene026232:intron | 40.0% | |
ATATTCCAGCAGCGGATATA+AGG | - | chr1.1:21914189-21914208 | MS.gene026232:intron | 40.0% | |
CAAACAAGATAGTTCACCAG+TGG | - | chr1.1:21915593-21915612 | MS.gene026232:intron | 40.0% | |
CAAATCCCATAAGGCTCAAA+TGG | + | chr1.1:21914510-21914529 | None:intergenic | 40.0% | |
CAACACCACTACTACATTGA+AGG | + | chr1.1:21915039-21915058 | None:intergenic | 40.0% | |
CAAGAGATGTGAGATCAGAA+GGG | + | chr1.1:21915066-21915085 | None:intergenic | 40.0% | |
CCAAACCCTAATACATTGGA+TGG | - | chr1.1:21915657-21915676 | MS.gene026232:CDS | 40.0% | |
CCATCCAATGTATTAGGGTT+TGG | + | chr1.1:21915660-21915679 | None:intergenic | 40.0% | |
CTGACTCAGATCATCAATGT+TGG | - | chr1.1:21913558-21913577 | MS.gene026232:CDS | 40.0% | |
GATGCTTAACCATTGCCTTT+GGG | - | chr1.1:21915282-21915301 | MS.gene026232:intron | 40.0% | |
GCAAAAGACGCACTGTATAT+AGG | + | chr1.1:21913203-21913222 | None:intergenic | 40.0% | |
GCATTAGCAGCCATAAAATG+GGG | - | chr1.1:21913473-21913492 | MS.gene026232:CDS | 40.0% | |
GTTGGAGGATATTATGATGC+TGG | - | chr1.1:21913344-21913363 | MS.gene026232:intron | 40.0% | |
GTTTCTGTTGCACCTTTAGT+TGG | - | chr1.1:21915756-21915775 | MS.gene026232:CDS | 40.0% | |
TAACCTAGACGAACAAAGAC+GGG | + | chr1.1:21913244-21913263 | None:intergenic | 40.0% | |
TGAAACCATAACAAACCTCC+TGG | + | chr1.1:21914932-21914951 | None:intergenic | 40.0% | |
TGATGCTTAACCATTGCCTT+TGG | - | chr1.1:21915281-21915300 | MS.gene026232:intron | 40.0% | |
TGCACAAATTCTTGCTGCAA+AGG | - | chr1.1:21914681-21914700 | MS.gene026232:intron | 40.0% | |
TGCACCAAACCCTAATACAT+TGG | - | chr1.1:21915653-21915672 | MS.gene026232:CDS | 40.0% | |
TTAAAGATGGCCAAGATGCT+GGG | - | chr1.1:21912852-21912871 | MS.gene026232:CDS | 40.0% | |
TTGTTATGGTTTCAGCCATG+GGG | - | chr1.1:21914938-21914957 | MS.gene026232:CDS | 40.0% | |
! | ATGAGTTATATGGTGGGGTA+TGG | - | chr1.1:21915519-21915538 | MS.gene026232:intron | 40.0% |
! | CAACATTGATGATCTGAGTC+AGG | + | chr1.1:21913560-21913579 | None:intergenic | 40.0% |
! | CACTTCCATTTGAGCCTTAT+GGG | - | chr1.1:21914502-21914521 | MS.gene026232:intron | 40.0% |
! | CTGGAATATACTTTTGCTGC+TGG | + | chr1.1:21914178-21914197 | None:intergenic | 40.0% |
! | GAATATACTTTTGCTGCTGG+TGG | + | chr1.1:21914175-21914194 | None:intergenic | 40.0% |
! | GCAAAAGTATATTCCAGCAG+CGG | - | chr1.1:21914181-21914200 | MS.gene026232:intron | 40.0% |
! | GTAGTCTGTTCCCCATTTTA+TGG | + | chr1.1:21913486-21913505 | None:intergenic | 40.0% |
! | GTTGGTGTTCTTGCTTATCT+AGG | - | chr1.1:21915774-21915793 | MS.gene026232:CDS | 40.0% |
! | TGCATGAACTAGCATTTTGG+AGG | + | chr1.1:21913723-21913742 | None:intergenic | 40.0% |
!! | AAACACCAGGAGGTTTGTTA+TGG | - | chr1.1:21914924-21914943 | MS.gene026232:CDS | 40.0% |
!! | GTTTGTTATGGTTTCAGCCA+TGG | - | chr1.1:21914936-21914955 | MS.gene026232:CDS | 40.0% |
!! | TTACTTTTGGTGGTAGCCAT+CGG | - | chr1.1:21913120-21913139 | MS.gene026232:intron | 40.0% |
!!! | TTTTTTGAGGGACAACGTTC+AGG | - | chr1.1:21912782-21912801 | MS.gene026232:CDS | 40.0% |
AACCAGAGAGTAACATGGAG+AGG | - | chr1.1:21912818-21912837 | MS.gene026232:CDS | 45.0% | |
AATGCTAACCAGTGTCCCAA+AGG | + | chr1.1:21915300-21915319 | None:intergenic | 45.0% | |
AATTACTATGGGCAGCAGCA+TGG | - | chr1.1:21914554-21914573 | MS.gene026232:intron | 45.0% | |
ACCAGAGAGTAACATGGAGA+GGG | - | chr1.1:21912819-21912838 | MS.gene026232:CDS | 45.0% | |
CACATCTCTTGTTCAAGCTC+AGG | - | chr1.1:21915075-21915094 | MS.gene026232:CDS | 45.0% | |
CAGAGGATATGTCAACACCT+AGG | - | chr1.1:21913588-21913607 | MS.gene026232:CDS | 45.0% | |
CAGTGGAGTCTTCTGGTATT+TGG | - | chr1.1:21914831-21914850 | MS.gene026232:CDS | 45.0% | |
CATGTGCAGATTGACCTAGT+TGG | - | chr1.1:21913326-21913345 | MS.gene026232:intron | 45.0% | |
CATGTTACTCTCTGGTTAGG+AGG | + | chr1.1:21912815-21912834 | None:intergenic | 45.0% | |
CTCCATGTTACTCTCTGGTT+AGG | + | chr1.1:21912818-21912837 | None:intergenic | 45.0% | |
CTCCTAACCAGAGAGTAACA+TGG | - | chr1.1:21912813-21912832 | MS.gene026232:CDS | 45.0% | |
CTTAAAGATGGCCAAGATGC+TGG | - | chr1.1:21912851-21912870 | MS.gene026232:CDS | 45.0% | |
CTTAAGGTCATGCTAACCAG+TGG | - | chr1.1:21915142-21915161 | MS.gene026232:CDS | 45.0% | |
GCTTCCCTTCAATGTAGTAG+TGG | - | chr1.1:21915031-21915050 | MS.gene026232:CDS | 45.0% | |
GGGGATTCTGCACTTAAAGA+TGG | - | chr1.1:21912839-21912858 | MS.gene026232:CDS | 45.0% | |
GGTGCAACAGAAACTGTAGT+TGG | + | chr1.1:21915750-21915769 | None:intergenic | 45.0% | |
TAAAGACACCATCCAACCGA+TGG | + | chr1.1:21913139-21913158 | None:intergenic | 45.0% | |
TAAAGATGGCCAAGATGCTG+GGG | - | chr1.1:21912853-21912872 | MS.gene026232:CDS | 45.0% | |
TCAATGTTGGCAAAGACCAG+AGG | - | chr1.1:21913571-21913590 | MS.gene026232:CDS | 45.0% | |
TGTGAGTGTGGTAAAGTTCG+TGG | + | chr1.1:21913862-21913881 | None:intergenic | 45.0% | |
! | CTGTAGTTGGCTCTCCTAAT+TGG | + | chr1.1:21915737-21915756 | None:intergenic | 45.0% |
! | GCTGGAGACAATTTGAAGCT+AGG | - | chr1.1:21913362-21913381 | MS.gene026232:intron | 45.0% |
! | TGAGCTTACCTCAGTTGGTA+CGG | - | chr1.1:21913791-21913810 | MS.gene026232:intron | 45.0% |
!! | CTAGGTGTTGACATATCCTC+TGG | + | chr1.1:21913590-21913609 | None:intergenic | 45.0% |
!!! | ATAATATTTTTTATTACTTT+TGG | - | chr1.1:21913107-21913126 | MS.gene026232:intron | 5.0% |
AACCAGTGGCATCAGGGTAA+TGG | - | chr1.1:21915156-21915175 | MS.gene026232:CDS | 50.0% | |
AACCAGTGTCCCAAAGGCAA+TGG | + | chr1.1:21915294-21915313 | None:intergenic | 50.0% | |
AAGCCATCTTTGCATCCCAC+TGG | + | chr1.1:21915612-21915631 | None:intergenic | 50.0% | |
CATGCTAACCAGTGGCATCA+GGG | - | chr1.1:21915150-21915169 | MS.gene026232:CDS | 50.0% | |
CCAGAGAGTAACATGGAGAG+GGG | - | chr1.1:21912820-21912839 | MS.gene026232:CDS | 50.0% | |
CCTCTCAAGCCCTAGCTATA+AGG | + | chr1.1:21915381-21915400 | None:intergenic | 50.0% | |
CCTTATAGCTAGGGCTTGAG+AGG | - | chr1.1:21915378-21915397 | MS.gene026232:intron | 50.0% | |
CTGCTGGTGGGATACTATTG+TGG | + | chr1.1:21914162-21914181 | None:intergenic | 50.0% | |
CTTCGTGAGCTTACCTCAGT+TGG | - | chr1.1:21913786-21913805 | MS.gene026232:intron | 50.0% | |
GATCACCTTATATCCGCTGC+TGG | + | chr1.1:21914197-21914216 | None:intergenic | 50.0% | |
GTGCAGATTGACCTAGTTGG+AGG | - | chr1.1:21913329-21913348 | MS.gene026232:intron | 50.0% | |
TCACCAGTGGGATGCAAAGA+TGG | - | chr1.1:21915606-21915625 | MS.gene026232:intron | 50.0% | |
TCATGCTAACCAGTGGCATC+AGG | - | chr1.1:21915149-21915168 | MS.gene026232:CDS | 50.0% | |
TGCATTGTCCGTACCAACTG+AGG | + | chr1.1:21913802-21913821 | None:intergenic | 50.0% | |
TTGCCCGTCTTTGTTCGTCT+AGG | - | chr1.1:21913238-21913257 | MS.gene026232:intron | 50.0% | |
! | TGCTGAAACTGCTGCTGCTT+TGG | - | chr1.1:21913655-21913674 | MS.gene026232:CDS | 50.0% |
! | TGGCATCAGGGTAATGGTCA+AGG | - | chr1.1:21915162-21915181 | MS.gene026232:CDS | 50.0% |
!! | AACCATTGCCTTTGGGACAC+TGG | - | chr1.1:21915289-21915308 | MS.gene026232:intron | 50.0% |
!! | TTTTGGTGGTAGCCATCGGT+TGG | - | chr1.1:21913124-21913143 | MS.gene026232:intron | 50.0% |
!!! | GCTTGTTTTAGATGGGGCAG+TGG | - | chr1.1:21914814-21914833 | MS.gene026232:CDS | 50.0% |
CCCCTCTCCATGTTACTCTC+TGG | + | chr1.1:21912823-21912842 | None:intergenic | 55.0% | |
CTCGATTACCTTGGAGGAGC+CGG | - | chr1.1:21914607-21914626 | MS.gene026232:intron | 55.0% | |
GACCATTACCCTGATGCCAC+TGG | + | chr1.1:21915161-21915180 | None:intergenic | 55.0% | |
TCAGCAGCAAGATCAGAGCC+AGG | + | chr1.1:21913641-21913660 | None:intergenic | 55.0% | |
TCTTGCACCTCCATTGTCGC+CGG | + | chr1.1:21914629-21914648 | None:intergenic | 55.0% | |
CGGCTCCTCCAAGGTAATCG+AGG | + | chr1.1:21914609-21914628 | None:intergenic | 60.0% | |
GATGGGGCAGTGGAGTCTTC+TGG | - | chr1.1:21914824-21914843 | MS.gene026232:CDS | 60.0% | |
! | GGTGGTAGCCATCGGTTGGA+TGG | - | chr1.1:21913128-21913147 | MS.gene026232:intron | 60.0% |
CTTGGAGGAGCCGGCGACAA+TGG | - | chr1.1:21914616-21914635 | MS.gene026232:intron | 65.0% | |
!! | CATTGTCGCCGGCTCCTCCA+AGG | + | chr1.1:21914618-21914637 | None:intergenic | 65.0% |
GGAGGAGCCGGCGACAATGG+AGG | - | chr1.1:21914619-21914638 | MS.gene026232:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 21912725 | 21915800 | 21912725 | ID=MS.gene026232 |
chr1.1 | mRNA | 21912725 | 21915800 | 21912725 | ID=MS.gene026232.t1;Parent=MS.gene026232 |
chr1.1 | exon | 21915651 | 21915800 | 21915651 | ID=MS.gene026232.t1.exon1;Parent=MS.gene026232.t1 |
chr1.1 | CDS | 21915651 | 21915800 | 21915651 | ID=cds.MS.gene026232.t1;Parent=MS.gene026232.t1 |
chr1.1 | exon | 21914777 | 21915190 | 21914777 | ID=MS.gene026232.t1.exon2;Parent=MS.gene026232.t1 |
chr1.1 | CDS | 21914777 | 21915190 | 21914777 | ID=cds.MS.gene026232.t1;Parent=MS.gene026232.t1 |
chr1.1 | exon | 21914315 | 21914401 | 21914315 | ID=MS.gene026232.t1.exon3;Parent=MS.gene026232.t1 |
chr1.1 | CDS | 21914315 | 21914401 | 21914315 | ID=cds.MS.gene026232.t1;Parent=MS.gene026232.t1 |
chr1.1 | exon | 21913823 | 21913975 | 21913823 | ID=MS.gene026232.t1.exon4;Parent=MS.gene026232.t1 |
chr1.1 | CDS | 21913823 | 21913975 | 21913823 | ID=cds.MS.gene026232.t1;Parent=MS.gene026232.t1 |
chr1.1 | exon | 21913429 | 21913710 | 21913429 | ID=MS.gene026232.t1.exon5;Parent=MS.gene026232.t1 |
chr1.1 | CDS | 21913429 | 21913710 | 21913429 | ID=cds.MS.gene026232.t1;Parent=MS.gene026232.t1 |
chr1.1 | exon | 21912725 | 21913039 | 21912725 | ID=MS.gene026232.t1.exon6;Parent=MS.gene026232.t1 |
chr1.1 | CDS | 21912725 | 21913039 | 21912725 | ID=cds.MS.gene026232.t1;Parent=MS.gene026232.t1 |
Gene Sequence |
Protein sequence |