AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70730.t1 MTR_3g080190 98.476 525 8 0 1 525 1 525 0.0 1090
MS.gene70730.t1 MTR_5g085730 81.621 506 91 2 21 525 12 516 0.0 884
MS.gene70730.t1 MTR_5g093590 71.546 485 137 1 22 505 16 500 0.0 747
MS.gene70730.t1 MTR_8g099410 61.373 466 178 1 40 505 28 491 0.0 627
MS.gene70730.t1 MTR_8g099410 61.373 466 178 1 40 505 28 491 0.0 625
MS.gene70730.t1 MTR_4g074960 60.897 468 180 3 39 505 27 492 0.0 598
MS.gene70730.t1 MTR_1g037340 50.620 484 227 6 23 503 5 479 7.91e-169 486
MS.gene70730.t1 MTR_5g009970 48.195 471 225 6 39 506 40 494 1.21e-153 448
MS.gene70730.t1 MTR_5g010000 48.326 478 228 6 36 510 36 497 2.33e-153 447
MS.gene70730.t1 MTR_8g104820 49.149 470 226 8 40 505 30 490 4.86e-152 444
MS.gene70730.t1 MTR_3g080810 48.718 468 229 7 40 505 35 493 6.18e-152 444
MS.gene70730.t1 MTR_3g117500 48.298 470 232 6 40 506 24 485 1.15e-150 440
MS.gene70730.t1 MTR_3g105230 46.220 463 233 5 31 493 21 467 3.00e-146 429
MS.gene70730.t1 MTR_4g035930 44.283 481 253 6 26 505 1 467 1.59e-144 424
MS.gene70730.t1 MTR_4g035955 45.114 481 248 7 26 505 1 466 3.58e-144 423
MS.gene70730.t1 MTR_3g023740 45.455 495 246 6 23 509 5 483 2.92e-142 419
MS.gene70730.t1 MTR_3g010330 46.695 469 234 7 40 505 25 480 3.88e-139 410
MS.gene70730.t1 MTR_4g035975 45.674 497 240 10 25 505 7 489 6.49e-138 408
MS.gene70730.t1 MTR_1g088190 46.138 492 221 10 15 503 26 476 3.60e-137 405
MS.gene70730.t1 MTR_5g009970 47.196 428 207 6 82 506 9 420 3.22e-133 394
MS.gene70730.t1 MTR_3g113720 43.524 471 252 9 41 506 58 519 4.72e-125 376
MS.gene70730.t1 MTR_5g009970 45.477 409 204 6 101 506 1 393 6.31e-121 361
MS.gene70730.t1 MTR_8g075990 43.008 472 253 10 41 506 64 525 3.06e-119 361
MS.gene70730.t1 MTR_2g028480 42.074 511 253 16 40 523 111 605 3.39e-103 323
MS.gene70730.t1 MTR_3g082440 39.300 486 259 15 40 502 116 588 5.42e-94 299
MS.gene70730.t1 MTR_3g090540 35.926 540 279 18 19 510 68 588 1.44e-92 295
MS.gene70730.t1 MTR_5g009970 44.868 341 169 6 169 506 1 325 6.66e-88 274
MS.gene70730.t1 MTR_1g088190 44.776 335 144 8 15 347 26 321 7.00e-76 243
MS.gene70730.t1 MTR_1g037320 54.658 161 72 1 101 261 1 160 1.89e-46 164
MS.gene70730.t1 MTR_1g037320 47.541 122 63 1 382 503 169 289 4.24e-33 128
MS.gene70730.t1 MTR_7g108925 47.097 155 81 1 349 503 43 196 2.81e-45 159
MS.gene70730.t1 MTR_0393s0050 44.286 140 78 0 349 488 20 159 9.31e-37 134
MS.gene70730.t1 MTR_4g128810 27.812 320 154 10 216 502 55 330 3.33e-28 115
MS.gene70730.t1 MTR_4g047570 31.304 115 56 3 289 402 2 94 9.07e-14 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70730.t1 AT2G32990 75.051 493 113 1 22 504 11 503 0.0 786
MS.gene70730.t1 AT1G64390 62.017 466 175 1 40 505 25 488 0.0 621
MS.gene70730.t1 AT4G11050 60.814 467 181 1 40 506 26 490 0.0 610
MS.gene70730.t1 AT4G11050 60.814 467 181 1 40 506 26 490 0.0 610
MS.gene70730.t1 AT4G11050 60.814 467 181 1 40 506 26 490 0.0 608
MS.gene70730.t1 AT1G48930 58.584 466 191 2 39 504 29 492 0.0 550
MS.gene70730.t1 AT2G44550 51.566 479 223 4 25 503 18 487 1.09e-168 486
MS.gene70730.t1 AT2G44540 50.830 482 227 5 22 503 17 488 4.62e-164 474
MS.gene70730.t1 AT2G44560 51.458 480 224 5 24 503 18 488 4.91e-162 469
MS.gene70730.t1 AT2G44570 48.240 483 241 5 24 505 17 491 1.96e-160 465
MS.gene70730.t1 AT1G02800 50.753 465 217 6 40 503 43 496 1.88e-151 443
MS.gene70730.t1 AT4G02290 49.786 468 223 7 40 505 52 509 2.25e-151 443
MS.gene70730.t1 AT1G70710 47.412 483 244 6 24 505 12 485 3.59e-151 442
MS.gene70730.t1 AT4G39010 47.021 470 237 7 40 505 29 490 3.67e-147 432
MS.gene70730.t1 AT1G23210 47.537 467 235 6 40 505 28 485 2.08e-146 429
MS.gene70730.t1 AT4G09740 47.639 487 233 8 24 506 7 475 2.34e-146 429
MS.gene70730.t1 AT4G23560 47.531 486 235 8 24 506 7 475 2.52e-146 429
MS.gene70730.t1 AT3G43860 45.946 481 243 6 26 505 19 483 8.31e-143 420
MS.gene70730.t1 AT3G43860 45.946 481 243 6 26 505 19 483 8.31e-143 420
MS.gene70730.t1 AT1G22880 46.488 484 244 8 24 505 8 478 4.49e-140 413
MS.gene70730.t1 AT1G71380 45.791 487 246 10 24 505 5 478 3.96e-138 408
MS.gene70730.t1 AT1G19940 47.403 462 233 7 40 500 48 500 1.49e-137 408
MS.gene70730.t1 AT1G19940 47.403 462 233 7 40 500 48 500 1.49e-137 408
MS.gene70730.t1 AT4G39000 45.684 475 246 7 40 510 25 491 3.15e-136 404
MS.gene70730.t1 AT1G75680 47.921 457 228 7 41 496 58 505 9.59e-134 398
MS.gene70730.t1 AT4G38990 43.469 490 260 9 25 505 8 489 3.92e-127 380
MS.gene70730.t1 AT4G02290 47.174 407 203 7 101 505 1 397 4.11e-118 354
MS.gene70730.t1 AT2G44570 45.570 395 206 5 24 417 17 403 3.79e-115 347
MS.gene70730.t1 AT1G22880 44.717 407 210 8 101 505 1 394 3.60e-112 338
MS.gene70730.t1 AT4G39010 46.448 366 185 6 40 401 29 387 8.37e-110 332
MS.gene70730.t1 AT1G19940 45.330 364 194 5 40 402 48 407 5.65e-99 305
MS.gene70730.t1 AT5G49720 42.245 490 242 16 40 502 108 583 1.67e-96 305
MS.gene70730.t1 AT1G65610 36.290 496 281 15 40 513 116 598 1.23e-87 282
MS.gene70730.t1 AT4G24260 41.309 489 250 15 40 503 108 584 1.53e-87 282
MS.gene70730.t1 AT4G38990 43.017 358 174 6 25 381 8 336 2.68e-83 263
MS.gene70730.t1 AT1G22880 48.476 328 155 7 24 349 8 323 5.62e-83 261
MS.gene70730.t1 AT4G24260 39.175 388 204 13 40 402 108 488 4.06e-55 193
MS.gene70730.t1 AT4G24260 41.390 331 162 11 40 342 108 434 1.06e-53 188

Find 116 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCACAAATTGATTACATTT+TGG 0.128319 3.1:+68029744 MS.gene70730:CDS
AGAACCAAATCCTAATATTT+TGG 0.167708 3.1:+68029918 MS.gene70730:CDS
CATACAACCAACGTGTTAAT+TGG 0.167826 3.1:+68026277 MS.gene70730:CDS
AAATATTAGGATTTGGTTCT+TGG 0.200576 3.1:-68029915 None:intergenic
ATGTAATGGAAGCAATTAAA+TGG 0.203237 3.1:+68026583 MS.gene70730:CDS
AACTCATGTTAAGTGGATTT+TGG 0.205279 3.1:-68029768 None:intergenic
ACCTCTATGATGCACCCTTT+TGG 0.242199 3.1:-68029818 None:intergenic
ATGAGTTACTTAGTGGGATA+TGG 0.273448 3.1:+68029784 MS.gene70730:CDS
GCAGGTGATCATGTGAAATT+TGG 0.274678 3.1:+68026474 MS.gene70730:CDS
TACTTTGAAGCACAACGTTC+TGG 0.276345 3.1:+68026246 MS.gene70730:CDS
ATTGTGCAGTTATTTGAGTT+TGG 0.280930 3.1:+68027868 MS.gene70730:intron
TTGTGCAGTTATTTGAGTTT+GGG 0.294397 3.1:+68027869 MS.gene70730:intron
ACCTCTGCCCACAACACATT+TGG 0.300565 3.1:-68026639 None:intergenic
CCAACCAAAATATTAGGATT+TGG 0.302553 3.1:-68029922 None:intergenic
ATATATAGAGAGTATTTAAA+AGG 0.306750 3.1:-68030118 None:intergenic
GTTAATTGGCGTCATCATTC+TGG 0.309546 3.1:+68026291 MS.gene70730:CDS
AAAGCTCCAACCAAAATATT+AGG 0.310755 3.1:-68029928 None:intergenic
CAGCTGCTTCCATTGTGTTT+AGG 0.320538 3.1:+68027120 MS.gene70730:CDS
TCAAAATTGTCTAGATTATC+AGG 0.328331 3.1:-68029961 None:intergenic
AGAGAGAATAAAGGGTTCAT+AGG 0.328810 3.1:+68029859 MS.gene70730:CDS
ATTTCTAATGCTCATACATT+TGG 0.331259 3.1:+68028036 MS.gene70730:CDS
GCACACAAGGGTATGATAAT+TGG 0.347724 3.1:+68029884 MS.gene70730:CDS
CAATTAACACGTTGGTTGTA+TGG 0.354636 3.1:-68026276 None:intergenic
CATGGAGTGCTATTGAGTTT+AGG 0.363527 3.1:+68026529 MS.gene70730:CDS
GTGACAATGATGTTTAAATC+TGG 0.367337 3.1:-68026142 None:intergenic
GCTCATACATTTGGTGGTAT+TGG 0.372035 3.1:+68028045 MS.gene70730:CDS
TTTCAGGTGGATTTGGTTGG+AGG 0.401221 3.1:+68026441 MS.gene70730:intron
TGTAATGGAAGCAATTAAAT+GGG 0.406228 3.1:+68026584 MS.gene70730:CDS
CCTCTGCCCACAACACATTT+GGG 0.407042 3.1:-68026638 None:intergenic
CAAAAGATCAATTGCCAAGA+TGG 0.412945 3.1:+68029685 MS.gene70730:CDS
GTATCATATAGAGAGAATAA+AGG 0.414088 3.1:+68029850 MS.gene70730:CDS
CTGGACGTTGCCAACAATAA+TGG 0.415828 3.1:-68027010 None:intergenic
CTTGAGGTTGTCATGTCCTC+TGG 0.417866 3.1:-68027029 None:intergenic
GTCAAAATATTCTTGTTTGT+CGG 0.429086 3.1:-68028007 None:intergenic
AAGATAGATGAGAAGAATCC+AGG 0.433832 3.1:+68027062 MS.gene70730:CDS
TTCAGGTGGATTTGGTTGGA+GGG 0.437613 3.1:+68026442 MS.gene70730:intron
TCATGCAAAGAGGGAATAGA+AGG 0.439518 3.1:+68030061 MS.gene70730:CDS
ATCCCAGCTGAATTCTGTTA+TGG 0.440268 3.1:-68028073 None:intergenic
ACTTTGAAGCACAACGTTCT+GGG 0.441438 3.1:+68026247 MS.gene70730:CDS
GGGAAATATGATGGAAGTGT+TGG 0.451425 3.1:+68027904 MS.gene70730:CDS
TATCATATAGAGAGAATAAA+GGG 0.456692 3.1:+68029851 MS.gene70730:CDS
TCTAATGCTCATACATTTGG+TGG 0.457457 3.1:+68028039 MS.gene70730:CDS
AGCTGGGATGTTAAGTATGC+TGG 0.465855 3.1:+68028087 MS.gene70730:CDS
ATGGGCCTAAGTACCCCAAA+AGG 0.469761 3.1:+68029803 MS.gene70730:CDS
ATACATTTGGTGGTATTGGT+TGG 0.472675 3.1:+68028049 MS.gene70730:CDS
TACTAGCCCAAATGTGTTGT+GGG 0.473525 3.1:+68026632 MS.gene70730:CDS
AGGCAAGAAATTGTTGAAGC+TGG 0.479140 3.1:+68026549 MS.gene70730:CDS
CCCAAATGTGTTGTGGGCAG+AGG 0.481112 3.1:+68026638 MS.gene70730:CDS
ACTAAGTAACTCATGTTAAG+TGG 0.486492 3.1:-68029775 None:intergenic
GGTCCATAACAGAATTCAGC+TGG 0.486609 3.1:+68028070 MS.gene70730:CDS
CAAAATTGAGAATTTCATCA+TGG 0.490347 3.1:-68029717 None:intergenic
ACTTAACATGAGTTACTTAG+TGG 0.491572 3.1:+68029777 MS.gene70730:CDS
TGAGTTACTTAGTGGGATAT+GGG 0.492298 3.1:+68029785 MS.gene70730:CDS
TTGGTTGGAGCTTTGGTAGG+AGG 0.493848 3.1:+68029937 MS.gene70730:CDS
TGGAGAAACTGCTGCAGCTA+TGG 0.496286 3.1:+68027097 MS.gene70730:CDS
CATCATTCTGGTCTTACAGA+TGG 0.500607 3.1:+68026303 MS.gene70730:CDS
AATGTAATCAATTTGTGACT+TGG 0.504606 3.1:-68029740 None:intergenic
GAAGAATCCAGGTTCAGATC+TGG 0.506230 3.1:+68027073 MS.gene70730:CDS
ATTGTTGAAGCTGGTGAACT+TGG 0.513050 3.1:+68026558 MS.gene70730:CDS
TTACCTTTGATGCTAAAACT+TGG 0.515672 3.1:-68028113 None:intergenic
CTTACAGATGGTTTAGAACA+AGG 0.516101 3.1:+68026315 MS.gene70730:CDS
ATAATCAAAAGATTGTGTTA+TGG 0.516983 3.1:-68026196 None:intergenic
CATGGCCCACAATCCCATCT+TGG 0.517673 3.1:-68029699 None:intergenic
AGCTACTATGCGTCGGTGAG+TGG 0.518978 3.1:+68027937 MS.gene70730:CDS
GAGAGAATAAAGGGTTCATA+GGG 0.518983 3.1:+68029860 MS.gene70730:CDS
TTGCAAAATTCATGCAAAGA+GGG 0.519154 3.1:+68030052 MS.gene70730:CDS
AAAAGATCAATTGCCAAGAT+GGG 0.520703 3.1:+68029686 MS.gene70730:CDS
AATTGCCAAGATGGGATTGT+GGG 0.521792 3.1:+68029694 MS.gene70730:CDS
ATATAATACTGCACCATTAG+TGG 0.523912 3.1:+68030023 MS.gene70730:CDS
AAATACAGAGGGAAATATGA+TGG 0.525154 3.1:+68027895 MS.gene70730:CDS
GAGACACAGACCATTATTGT+TGG 0.526224 3.1:+68027000 MS.gene70730:CDS
CAAGGGTATGATAATTGGTA+TGG 0.527762 3.1:+68029889 MS.gene70730:CDS
TGTGCAGTTATTTGAGTTTG+GGG 0.529149 3.1:+68027870 MS.gene70730:intron
TGTGAAATTTGGTTTACCAA+TGG 0.529922 3.1:+68026485 MS.gene70730:CDS
AAAATATTCTTGTTTGTCGG+TGG 0.547238 3.1:-68028004 None:intergenic
TTTGCAAAATTCATGCAAAG+AGG 0.550554 3.1:+68030051 MS.gene70730:CDS
GATACATGGATGAGTTATTG+TGG 0.552659 3.1:+68027959 MS.gene70730:CDS
TATAATACTGCACCATTAGT+GGG 0.560164 3.1:+68030024 MS.gene70730:CDS
GTTGGAGGGTACTATGATGC+AGG 0.563279 3.1:+68026456 MS.gene70730:CDS
TGACAATGATGTTTAAATCT+GGG 0.565379 3.1:-68026141 None:intergenic
TGCGTCGGTGAGTGGATACA+TGG 0.568122 3.1:+68027945 MS.gene70730:CDS
GGGTTCATAGGGTGCACACA+AGG 0.574402 3.1:+68029871 MS.gene70730:CDS
ATACTAGCCCAAATGTGTTG+TGG 0.577675 3.1:+68026631 MS.gene70730:CDS
TCTCCAGCCAGATCTGAACC+TGG 0.578429 3.1:-68027080 None:intergenic
ATACATGGATGAGTTATTGT+GGG 0.579757 3.1:+68027960 MS.gene70730:CDS
TTACTGTCACAATGTTGTCA+TGG 0.583673 3.1:+68026511 MS.gene70730:CDS
TACAGATGGTTTAGAACAAG+GGG 0.583836 3.1:+68026317 MS.gene70730:CDS
GCAAAGAGGGAATAGAAGGT+TGG 0.590189 3.1:+68030065 MS.gene70730:CDS
TATCTTAAAAGCTTGTCTTG+AGG 0.590517 3.1:-68027045 None:intergenic
AGTTATTGTGGGGAGCTATG+TGG 0.591433 3.1:+68027971 MS.gene70730:CDS
AATCCAGGTTCAGATCTGGC+TGG 0.593866 3.1:+68027077 MS.gene70730:CDS
CTTAACATGAGTTACTTAGT+GGG 0.597597 3.1:+68029778 MS.gene70730:CDS
ATTCTCTCTATATGATACAA+TGG 0.597953 3.1:-68029845 None:intergenic
CAATTGCCAAGATGGGATTG+TGG 0.600603 3.1:+68029693 MS.gene70730:CDS
ATTGTGACAGTAAATGCCAT+TGG 0.602158 3.1:-68026501 None:intergenic
TGGTGAACTTGGTCATGTAA+TGG 0.602665 3.1:+68026569 MS.gene70730:CDS
TGGGCCTAAGTACCCCAAAA+GGG 0.608177 3.1:+68029804 MS.gene70730:CDS
CTTACATAGAGTAATCCAGC+TGG 0.611840 3.1:-68029583 None:intergenic
TTACAGATGGTTTAGAACAA+GGG 0.612255 3.1:+68026316 MS.gene70730:CDS
AATGTGGAAAGAACACCAGC+TGG 0.616199 3.1:+68029568 MS.gene70730:CDS
CCCAAAAGGGTGCATCATAG+AGG 0.625621 3.1:+68029817 MS.gene70730:CDS
AGTTTGGGGACAAATACAGA+GGG 0.630720 3.1:+68027884 MS.gene70730:CDS
TTACTACTACCTGCTGAGCA+TGG 0.641231 3.1:-68027178 None:intergenic
GTCCATAACAGAATTCAGCT+GGG 0.643895 3.1:+68028071 MS.gene70730:CDS
GATGACGCCAATTAACACGT+TGG 0.651812 3.1:-68026284 None:intergenic
TTATTGTTGGCAACGTCCAG+AGG 0.652974 3.1:+68027013 MS.gene70730:CDS
AGTGAAGAGCTACTATGCGT+CGG 0.655502 3.1:+68027930 MS.gene70730:CDS
AAAAGTAGCTGAGAATAATG+TGG 0.661774 3.1:-68027152 None:intergenic
GAGTTTGGGGACAAATACAG+AGG 0.667296 3.1:+68027883 MS.gene70730:CDS
GAACAATTATGTGCAAACTG+AGG 0.668349 3.1:+68029993 MS.gene70730:CDS
GTAATGGAAGCAATTAAATG+GGG 0.669304 3.1:+68026585 MS.gene70730:CDS
AAACAATGGCAGCAGCAATG+TGG 0.670730 3.1:+68029552 MS.gene70730:CDS
GGTTCATAGGGTGCACACAA+GGG 0.675227 3.1:+68029872 MS.gene70730:CDS
TTGAAGCACAACGTTCTGGG+AGG 0.691689 3.1:+68026250 MS.gene70730:CDS
GATTACTCTATGTAAGACAG+TGG 0.704386 3.1:+68029590 MS.gene70730:CDS
TACATGGATGAGTTATTGTG+GGG 0.766782 3.1:+68027961 MS.gene70730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGAATAATTTATTATGTT+TGG + chr3.1:68027265-68027284 MS.gene70730:intron 10.0%
!! TATTAAAATATGTAAAACAA+GGG + chr3.1:68027343-68027362 MS.gene70730:intron 10.0%
!!! TACTAATATTTTTACTTAAT+TGG - chr3.1:68027767-68027786 None:intergenic 10.0%
!! AAAATACAAACAAAACAAAA+GGG + chr3.1:68028134-68028153 MS.gene70730:intron 15.0%
!! GTATTAAAATATGTAAAACA+AGG + chr3.1:68027342-68027361 MS.gene70730:intron 15.0%
!! TAAAATACAAACAAAACAAA+AGG + chr3.1:68028133-68028152 MS.gene70730:intron 15.0%
!!! AAAGTTGAGATTTTTATTTT+TGG + chr3.1:68026408-68026427 MS.gene70730:intron 15.0%
!!! AAGTTGAGATTTTTATTTTT+GGG + chr3.1:68026409-68026428 MS.gene70730:intron 15.0%
!!! TATCATTTTATTTGATTTGA+TGG + chr3.1:68028438-68028457 MS.gene70730:intron 15.0%
!!! TTTTGATTGTGTTTTTTTTT+TGG + chr3.1:68027448-68027467 MS.gene70730:intron 15.0%
!! AAAAAATAACAAATGGATCA+AGG - chr3.1:68029178-68029197 None:intergenic 20.0%
!! AAAAATAACAAATGGATCAA+GGG - chr3.1:68029177-68029196 None:intergenic 20.0%
!! AAGAAACAACAAAATCTTAA+TGG + chr3.1:68028697-68028716 MS.gene70730:intron 20.0%
!! ACTATCCAAAAAATAACAAA+TGG - chr3.1:68029185-68029204 None:intergenic 20.0%
!! ATAATCAAAAGATTGTGTTA+TGG - chr3.1:68026199-68026218 None:intergenic 20.0%
!! GAAGTCAAAAATAAAATGAT+GGG + chr3.1:68028365-68028384 MS.gene70730:intron 20.0%
!! TAGACTATAGCTAATATAAA+TGG + chr3.1:68028632-68028651 MS.gene70730:intron 20.0%
!! TATCATATAGAGAGAATAAA+GGG + chr3.1:68029851-68029870 MS.gene70730:CDS 20.0%
!! TCTAAAAGAACAAATATTTC+TGG + chr3.1:68029289-68029308 MS.gene70730:intron 20.0%
!! TGAAGTCAAAAATAAAATGA+TGG + chr3.1:68028364-68028383 MS.gene70730:intron 20.0%
!! TTTAGAAGAAGAAAATTTCA+GGG + chr3.1:68029069-68029088 MS.gene70730:intron 20.0%
!!! AAGATTGTAAATAGCTATTT+TGG + chr3.1:68027367-68027386 MS.gene70730:intron 20.0%
!!! ACTACAGTAAATAGTTATTT+TGG - chr3.1:68027624-68027643 None:intergenic 20.0%
!!! ACTTTTGAAACTAAAGTAAA+AGG - chr3.1:68028414-68028433 None:intergenic 20.0%
!!! ATTTGTTATTTTTTGGATAG+TGG + chr3.1:68029184-68029203 MS.gene70730:intron 20.0%
!!! ATTTGTTCTTTTAGAAATGT+GGG - chr3.1:68029284-68029303 None:intergenic 20.0%
!!! GAAACAAAATTCTGAAATTA+AGG + chr3.1:68026955-68026974 MS.gene70730:intron 20.0%
!!! GAAATTAAGGTTTTTTACTT+AGG + chr3.1:68026968-68026987 MS.gene70730:intron 20.0%
!!! TACTACACTATCAATTTTAA+AGG + chr3.1:68027697-68027716 MS.gene70730:intron 20.0%
!!! TACTAGTAAACTTTTACATA+AGG - chr3.1:68029389-68029408 None:intergenic 20.0%
!!! TATTTGTTCTTTTAGAAATG+TGG - chr3.1:68029285-68029304 None:intergenic 20.0%
!!! TCACAAATTGATTACATTTT+GGG + chr3.1:68029745-68029764 MS.gene70730:CDS 20.0%
!!! TTCAAACATGTCAATTTTAT+AGG + chr3.1:68028211-68028230 MS.gene70730:intron 20.0%
!!! TTCTAGTATTTTATTTGTGT+TGG + chr3.1:68028282-68028301 MS.gene70730:intron 20.0%
!!! TTGATCCATTTGTTATTTTT+TGG + chr3.1:68029177-68029196 MS.gene70730:intron 20.0%
!!! TTTCATTTTCTTGATTTTGA+TGG + chr3.1:68026361-68026380 MS.gene70730:intron 20.0%
!!! TTTGTTATTTTTTGGATAGT+GGG + chr3.1:68029185-68029204 MS.gene70730:intron 20.0%
! AATGTAATCAATTTGTGACT+TGG - chr3.1:68029743-68029762 None:intergenic 25.0%
! AGAATAGTCATTGGTAAATA+AGG - chr3.1:68029038-68029057 None:intergenic 25.0%
! AGACAAAAAAGAGTGATTAA+AGG - chr3.1:68028163-68028182 None:intergenic 25.0%
! ATCTAAGGGATATTGTTAAT+AGG + chr3.1:68028467-68028486 MS.gene70730:intron 25.0%
! ATTCTCTCTATATGATACAA+TGG - chr3.1:68029848-68029867 None:intergenic 25.0%
! ATTTCTAATGCTCATACATT+TGG + chr3.1:68028036-68028055 MS.gene70730:CDS 25.0%
! CAAAATTGAGAATTTCATCA+TGG - chr3.1:68029720-68029739 None:intergenic 25.0%
! GTATCATATAGAGAGAATAA+AGG + chr3.1:68029850-68029869 MS.gene70730:CDS 25.0%
! GTTTAGAAGAAGAAAATTTC+AGG + chr3.1:68029068-68029087 MS.gene70730:intron 25.0%
! TACTTGTCTCTTAAAGTTAA+AGG - chr3.1:68027325-68027344 None:intergenic 25.0%
! TCAAAATTGTCTAGATTATC+AGG - chr3.1:68029964-68029983 None:intergenic 25.0%
! TGACAATGATGTTTAAATCT+GGG - chr3.1:68026144-68026163 None:intergenic 25.0%
! TGACTAACAAAACATATAAC+AGG - chr3.1:68027502-68027521 None:intergenic 25.0%
! TGCATATATAGAATAGTCAT+TGG - chr3.1:68029047-68029066 None:intergenic 25.0%
! TTAGCTATAGTCTATTCTTA+TGG - chr3.1:68028626-68028645 None:intergenic 25.0%
! TTCAGTGTAATTATATGTGT+TGG + chr3.1:68026759-68026778 MS.gene70730:intron 25.0%
! TTTCTTAAAGCCCAAAATAA+AGG - chr3.1:68029211-68029230 None:intergenic 25.0%
!! AGAACCAAATCCTAATATTT+TGG + chr3.1:68029918-68029937 MS.gene70730:CDS 25.0%
!! ATGTAATGGAAGCAATTAAA+TGG + chr3.1:68026583-68026602 MS.gene70730:CDS 25.0%
!! ATGTACATTTGAAGTGATAT+TGG + chr3.1:68029346-68029365 MS.gene70730:intron 25.0%
!! GTAACTTTTGTAGTTTTTGA+TGG + chr3.1:68029447-68029466 MS.gene70730:intron 25.0%
!! GTCAAAATATTCTTGTTTGT+CGG - chr3.1:68028010-68028029 None:intergenic 25.0%
!! GTCACAAATTGATTACATTT+TGG + chr3.1:68029744-68029763 MS.gene70730:CDS 25.0%
!! TGATAATCTAGACAATTTTG+AGG + chr3.1:68029963-68029982 MS.gene70730:CDS 25.0%
!! TGTAATGGAAGCAATTAAAT+GGG + chr3.1:68026584-68026603 MS.gene70730:CDS 25.0%
!! TGTACATTTGAAGTGATATT+GGG + chr3.1:68029347-68029366 MS.gene70730:intron 25.0%
!!! AAATATTAGGATTTGGTTCT+TGG - chr3.1:68029918-68029937 None:intergenic 25.0%
!!! AATTTTAAAGGCAAATAGTG+GGG + chr3.1:68027709-68027728 MS.gene70730:intron 25.0%
!!! ACACTTTTTATGTTTTCTTC+AGG + chr3.1:68028938-68028957 MS.gene70730:intron 25.0%
!!! ATTAAGGTTTTTTACTTAGG+TGG + chr3.1:68026971-68026990 MS.gene70730:intron 25.0%
!!! ATTTGTTTTCCTAAACACAA+TGG - chr3.1:68027132-68027151 None:intergenic 25.0%
!!! CAATTTTAAAGGCAAATAGT+GGG + chr3.1:68027708-68027727 MS.gene70730:intron 25.0%
!!! CACTTTTTATGTTTTCTTCA+GGG + chr3.1:68028939-68028958 MS.gene70730:intron 25.0%
!!! TCAATTTTAAAGGCAAATAG+TGG + chr3.1:68027707-68027726 MS.gene70730:intron 25.0%
!!! TTAAGGTTTTTTACTTAGGT+GGG + chr3.1:68026972-68026991 MS.gene70730:intron 25.0%
!!! TTGGAATTTTGACATATTCA+TGG + chr3.1:68027566-68027585 MS.gene70730:intron 25.0%
AAAAGATCAATTGCCAAGAT+GGG + chr3.1:68029686-68029705 MS.gene70730:CDS 30.0%
AAAAGTAGCTGAGAATAATG+TGG - chr3.1:68027155-68027174 None:intergenic 30.0%
AAAGCTCCAACCAAAATATT+AGG - chr3.1:68029931-68029950 None:intergenic 30.0%
AAATACAGAGGGAAATATGA+TGG + chr3.1:68027895-68027914 MS.gene70730:CDS 30.0%
ACTAAGTAACTCATGTTAAG+TGG - chr3.1:68029778-68029797 None:intergenic 30.0%
ACTTAACATGAGTTACTTAG+TGG + chr3.1:68029777-68029796 MS.gene70730:CDS 30.0%
ATACATGGATGAGTTATTGT+GGG + chr3.1:68027960-68027979 MS.gene70730:CDS 30.0%
ATATAATACTGCACCATTAG+TGG + chr3.1:68030023-68030042 MS.gene70730:CDS 30.0%
ATTATGCATTCACACTTATC+AGG - chr3.1:68027661-68027680 None:intergenic 30.0%
ATTTGATGGAGCAATATCTA+AGG + chr3.1:68028452-68028471 MS.gene70730:intron 30.0%
CCAACCAAAATATTAGGATT+TGG - chr3.1:68029925-68029944 None:intergenic 30.0%
CTATCACAGTTCAATTAAAG+TGG + chr3.1:68028546-68028565 MS.gene70730:intron 30.0%
CTCTTTGATTAGTAATCTCA+TGG - chr3.1:68027532-68027551 None:intergenic 30.0%
CTTAACATGAGTTACTTAGT+GGG + chr3.1:68029778-68029797 MS.gene70730:CDS 30.0%
GACAAATGTTGAAGTTTCAA+TGG + chr3.1:68028586-68028605 MS.gene70730:intron 30.0%
GAGAAATAAGCCATTGAAAA+AGG - chr3.1:68028312-68028331 None:intergenic 30.0%
GTGAATATAGCACAATTTAG+AGG - chr3.1:68027204-68027223 None:intergenic 30.0%
GTGACAATGATGTTTAAATC+TGG - chr3.1:68026145-68026164 None:intergenic 30.0%
TAATGCACAATGATTGATAG+TGG + chr3.1:68029112-68029131 MS.gene70730:intron 30.0%
TATAATACTGCACCATTAGT+GGG + chr3.1:68030024-68030043 MS.gene70730:CDS 30.0%
TATCTTAAAAGCTTGTCTTG+AGG - chr3.1:68027048-68027067 None:intergenic 30.0%
TCATGTCTCAACAAAAACAA+TGG + chr3.1:68029538-68029557 MS.gene70730:CDS 30.0%
TCTCAAATTATTAGCAGTGT+GGG - chr3.1:68026728-68026747 None:intergenic 30.0%
TTACCTTTGATGCTAAAACT+TGG - chr3.1:68028116-68028135 None:intergenic 30.0%
TTCTCAAATTATTAGCAGTG+TGG - chr3.1:68026729-68026748 None:intergenic 30.0%
TTGCAAAATTCATGCAAAGA+GGG + chr3.1:68030052-68030071 MS.gene70730:CDS 30.0%
TTGTGCTATATTCACTATAG+TGG + chr3.1:68027209-68027228 MS.gene70730:intron 30.0%
TTTGATGGAGCAATATCTAA+GGG + chr3.1:68028453-68028472 MS.gene70730:intron 30.0%
TTTGCAAAATTCATGCAAAG+AGG + chr3.1:68030051-68030070 MS.gene70730:CDS 30.0%
! AAAATATTCTTGTTTGTCGG+TGG - chr3.1:68028007-68028026 None:intergenic 30.0%
! AAGGTGCTTAAAAATGAAGT+GGG - chr3.1:68027306-68027325 None:intergenic 30.0%
! ACTTTTCTCAAAAAGTCTCA+CGG - chr3.1:68026840-68026859 None:intergenic 30.0%
! ATGTTAGTAAAGCATTATGC+AGG - chr3.1:68028345-68028364 None:intergenic 30.0%
! ATTGTGCAGTTATTTGAGTT+TGG + chr3.1:68027868-68027887 MS.gene70730:intron 30.0%
! GATGGGTTTAAGACTTAATT+TGG + chr3.1:68028382-68028401 MS.gene70730:intron 30.0%
! GTAATGGAAGCAATTAAATG+GGG + chr3.1:68026585-68026604 MS.gene70730:CDS 30.0%
! TGTGAAATTTGGTTTACCAA+TGG + chr3.1:68026485-68026504 MS.gene70730:CDS 30.0%
! TTACAGATGGTTTAGAACAA+GGG + chr3.1:68026316-68026335 MS.gene70730:CDS 30.0%
! TTGTGCAGTTATTTGAGTTT+GGG + chr3.1:68027869-68027888 MS.gene70730:intron 30.0%
! TTTCCAATTTTTGAACTTCC+TGG + chr3.1:68026907-68026926 MS.gene70730:intron 30.0%
!! AAAGGTGCTTAAAAATGAAG+TGG - chr3.1:68027307-68027326 None:intergenic 30.0%
!! AACTCATGTTAAGTGGATTT+TGG - chr3.1:68029771-68029790 None:intergenic 30.0%
!! TAGACAATTTTGAGGATCAA+AGG + chr3.1:68029971-68029990 MS.gene70730:CDS 30.0%
!! TATTTCTGGAAATGTACTTC+TGG + chr3.1:68029303-68029322 MS.gene70730:intron 30.0%
!! TGATCTTTTGATTCTCACTT+TGG - chr3.1:68029675-68029694 None:intergenic 30.0%
!!! CCAAATCCTAATATTTTGGT+TGG + chr3.1:68029922-68029941 MS.gene70730:CDS 30.0%
!!! TAATATTTTGGTTGGAGCTT+TGG + chr3.1:68029930-68029949 MS.gene70730:CDS 30.0%
!!! TGTTGGTTTTCCTTTTTCAA+TGG + chr3.1:68028299-68028318 MS.gene70730:intron 30.0%
!!! TTTTGGGTTTGTGTTTTTTC+AGG + chr3.1:68026425-68026444 MS.gene70730:intron 30.0%
AAGATAGATGAGAAGAATCC+AGG + chr3.1:68027062-68027081 MS.gene70730:CDS 35.0%
AAGTGTGTATTCCATGAATG+TGG - chr3.1:68028924-68028943 None:intergenic 35.0%
ACAGTTCAATTAAAGTGGTC+TGG + chr3.1:68028551-68028570 MS.gene70730:intron 35.0%
AGAGAGAATAAAGGGTTCAT+AGG + chr3.1:68029859-68029878 MS.gene70730:CDS 35.0%
AGGGTTTGCAATAAATCAGT+TGG + chr3.1:68028958-68028977 MS.gene70730:intron 35.0%
AGTAAAAGCAAAAAGCAGCA+TGG - chr3.1:68028238-68028257 None:intergenic 35.0%
AGTGTGTATTCCATGAATGT+GGG - chr3.1:68028923-68028942 None:intergenic 35.0%
ATGAGTTACTTAGTGGGATA+TGG + chr3.1:68029784-68029803 MS.gene70730:CDS 35.0%
ATTAAAGTGGTCTGGCTATA+TGG + chr3.1:68028559-68028578 MS.gene70730:intron 35.0%
ATTGTGACAGTAAATGCCAT+TGG - chr3.1:68026504-68026523 None:intergenic 35.0%
CAAAAGATCAATTGCCAAGA+TGG + chr3.1:68029685-68029704 MS.gene70730:CDS 35.0%
CAACCAGGAAGTTCAAAAAT+TGG - chr3.1:68026913-68026932 None:intergenic 35.0%
CACTTATCAGGAACATTACT+TGG - chr3.1:68027649-68027668 None:intergenic 35.0%
CATACAACCAACGTGTTAAT+TGG + chr3.1:68026277-68026296 MS.gene70730:CDS 35.0%
CATTAATCATCACATCAACC+AGG - chr3.1:68026928-68026947 None:intergenic 35.0%
GAACAATTATGTGCAAACTG+AGG + chr3.1:68029993-68030012 MS.gene70730:CDS 35.0%
GAGAGAATAAAGGGTTCATA+GGG + chr3.1:68029860-68029879 MS.gene70730:CDS 35.0%
GATACATGGATGAGTTATTG+TGG + chr3.1:68027959-68027978 MS.gene70730:CDS 35.0%
GATTACTCTATGTAAGACAG+TGG + chr3.1:68029590-68029609 MS.gene70730:CDS 35.0%
GCTATAGTCTATTCTTATGG+AGG - chr3.1:68028623-68028642 None:intergenic 35.0%
TACATGGATGAGTTATTGTG+GGG + chr3.1:68027961-68027980 MS.gene70730:CDS 35.0%
TCAATCAGATAAGCAATCAG+TGG - chr3.1:68028837-68028856 None:intergenic 35.0%
TCTAATGCTCATACATTTGG+TGG + chr3.1:68028039-68028058 MS.gene70730:CDS 35.0%
TGAGTTACTTAGTGGGATAT+GGG + chr3.1:68029785-68029804 MS.gene70730:CDS 35.0%
TTACTGTCACAATGTTGTCA+TGG + chr3.1:68026511-68026530 MS.gene70730:CDS 35.0%
TTTGAATTAAGCCAACCTAG+AGG - chr3.1:68028197-68028216 None:intergenic 35.0%
TTTGCAAAAACTCCCACTAA+TGG - chr3.1:68030039-68030058 None:intergenic 35.0%
! AAAACTGCTAGAGCACATTT+TGG + chr3.1:68028990-68029009 MS.gene70730:intron 35.0%
! AAGAGACTCGTGAATGTTTT+TGG + chr3.1:68027547-68027566 MS.gene70730:intron 35.0%
! CAAGGGTATGATAATTGGTA+TGG + chr3.1:68029889-68029908 MS.gene70730:CDS 35.0%
! CAATTAACACGTTGGTTGTA+TGG - chr3.1:68026279-68026298 None:intergenic 35.0%
! CTGGTTGATGTGATGATTAA+TGG + chr3.1:68026926-68026945 MS.gene70730:intron 35.0%
! CTTACAGATGGTTTAGAACA+AGG + chr3.1:68026315-68026334 MS.gene70730:CDS 35.0%
! CTTTTCTCAAAAAGTCTCAC+GGG - chr3.1:68026839-68026858 None:intergenic 35.0%
! GACATATTCATGGACTATAG+TGG + chr3.1:68027576-68027595 MS.gene70730:intron 35.0%
! TACAGATGGTTTAGAACAAG+GGG + chr3.1:68026317-68026336 MS.gene70730:CDS 35.0%
! TGTGCAGTTATTTGAGTTTG+GGG + chr3.1:68027870-68027889 MS.gene70730:intron 35.0%
!! ACATGCATTGACTGTCAAAA+TGG + chr3.1:68028799-68028818 MS.gene70730:intron 35.0%
!! ATACATTTGGTGGTATTGGT+TGG + chr3.1:68028049-68028068 MS.gene70730:CDS 35.0%
!! TCTCCAAGTTTTAGCATCAA+AGG + chr3.1:68028110-68028129 MS.gene70730:CDS 35.0%
!!! TAGAGCACATTTTGGTTACT+TGG + chr3.1:68028998-68029017 MS.gene70730:intron 35.0%
!!! TGCTGCTTTTTGCTTTTACT+TGG + chr3.1:68028238-68028257 MS.gene70730:intron 35.0%
!!! TGTGTTTTTTCAGGTGGATT+TGG + chr3.1:68026434-68026453 MS.gene70730:intron 35.0%
!!! TTTTTTACTTAGGTGGGTGA+TGG + chr3.1:68026978-68026997 MS.gene70730:intron 35.0%
!!! TTTTTTCAGGTGGATTTGGT+TGG + chr3.1:68026438-68026457 MS.gene70730:intron 35.0%
AATTGCCAAGATGGGATTGT+GGG + chr3.1:68029694-68029713 MS.gene70730:CDS 40.0%
ACTATAGTGGCACTAGTGTT+TGG + chr3.1:68027222-68027241 MS.gene70730:intron 40.0%
AGGCAAGAAATTGTTGAAGC+TGG + chr3.1:68026549-68026568 MS.gene70730:CDS 40.0%
AGTTTGGGGACAAATACAGA+GGG + chr3.1:68027884-68027903 MS.gene70730:CDS 40.0%
ATACTAGCCCAAATGTGTTG+TGG + chr3.1:68026631-68026650 MS.gene70730:CDS 40.0%
ATCCCAGCTGAATTCTGTTA+TGG - chr3.1:68028076-68028095 None:intergenic 40.0%
ATTGTTGAAGCTGGTGAACT+TGG + chr3.1:68026558-68026577 MS.gene70730:CDS 40.0%
CATGAGGCAAGCTATTACTA+TGG + chr3.1:68028890-68028909 MS.gene70730:intron 40.0%
CTTACATAGAGTAATCCAGC+TGG - chr3.1:68029586-68029605 None:intergenic 40.0%
GAGACACAGACCATTATTGT+TGG + chr3.1:68027000-68027019 MS.gene70730:CDS 40.0%
GATTAGACATGTCACAGTGT+CGG - chr3.1:68026793-68026812 None:intergenic 40.0%
GCAGGTGATCATGTGAAATT+TGG + chr3.1:68026474-68026493 MS.gene70730:CDS 40.0%
GGCATTGTCTCGCATATTTA+AGG + chr3.1:68027597-68027616 MS.gene70730:intron 40.0%
GTCCATAACAGAATTCAGCT+GGG + chr3.1:68028071-68028090 MS.gene70730:CDS 40.0%
GTGTGTATTCCATGAATGTG+GGG - chr3.1:68028922-68028941 None:intergenic 40.0%
GTTAATTGGCGTCATCATTC+TGG + chr3.1:68026291-68026310 MS.gene70730:CDS 40.0%
TAACAAATGGATCAAGGGCA+AGG - chr3.1:68029172-68029191 None:intergenic 40.0%
TACTAGCCCAAATGTGTTGT+GGG + chr3.1:68026632-68026651 MS.gene70730:CDS 40.0%
TAGACTGCATCAATTGCACA+TGG - chr3.1:68028529-68028548 None:intergenic 40.0%
TCATGCAAAGAGGGAATAGA+AGG + chr3.1:68030061-68030080 MS.gene70730:CDS 40.0%
TGGTGAACTTGGTCATGTAA+TGG + chr3.1:68026569-68026588 MS.gene70730:CDS 40.0%
! CATGGAGTGCTATTGAGTTT+AGG + chr3.1:68026529-68026548 MS.gene70730:CDS 40.0%
! GAAAGTTGATCCCTTTGCAT+AGG - chr3.1:68029255-68029274 None:intergenic 40.0%
! GCACACAAGGGTATGATAAT+TGG + chr3.1:68029884-68029903 MS.gene70730:CDS 40.0%
! GCTCATACATTTGGTGGTAT+TGG + chr3.1:68028045-68028064 MS.gene70730:CDS 40.0%
! GGGAAATATGATGGAAGTGT+TGG + chr3.1:68027904-68027923 MS.gene70730:CDS 40.0%
! GTGCTCTAGCAGTTTTACAA+TGG - chr3.1:68028986-68029005 None:intergenic 40.0%
! TTCAATGGCTTATTTCTCGC+TGG + chr3.1:68028314-68028333 MS.gene70730:intron 40.0%
! TTGCCTCATGATGAGTTGAA+GGG - chr3.1:68028880-68028899 None:intergenic 40.0%
!! ACTTTGAAGCACAACGTTCT+GGG + chr3.1:68026247-68026266 MS.gene70730:CDS 40.0%
!! CATCATTCTGGTCTTACAGA+TGG + chr3.1:68026303-68026322 MS.gene70730:CDS 40.0%
!! CTTTTAGAAATGTGGGAGTG+TGG - chr3.1:68029277-68029296 None:intergenic 40.0%
!! GCACAATGATTGATAGTGGA+TGG + chr3.1:68029116-68029135 MS.gene70730:intron 40.0%
!! TACTTTGAAGCACAACGTTC+TGG + chr3.1:68026246-68026265 MS.gene70730:CDS 40.0%
!!! ATTTTGGTTGGAGCTTTGGT+AGG + chr3.1:68029934-68029953 MS.gene70730:CDS 40.0%
!!! GGATAGTGGGCCTTTATTTT+GGG + chr3.1:68029198-68029217 MS.gene70730:intron 40.0%
!!! TGGATAGTGGGCCTTTATTT+TGG + chr3.1:68029197-68029216 MS.gene70730:intron 40.0%
!!! TGGGTTTGTGTTTTTTCAGG+TGG + chr3.1:68026428-68026447 MS.gene70730:intron 40.0%
AAACAATGGCAGCAGCAATG+TGG + chr3.1:68029552-68029571 MS.gene70730:CDS 45.0%
AATGTGGAAAGAACACCAGC+TGG + chr3.1:68029568-68029587 MS.gene70730:CDS 45.0%
ACTGTGACATGTCTAATCCG+AGG + chr3.1:68026795-68026814 MS.gene70730:intron 45.0%
AGCTGGGATGTTAAGTATGC+TGG + chr3.1:68028087-68028106 MS.gene70730:CDS 45.0%
AGTGAAGAGCTACTATGCGT+CGG + chr3.1:68027930-68027949 MS.gene70730:CDS 45.0%
AGTGGCACTAGTGTTTGGTT+TGG + chr3.1:68027227-68027246 MS.gene70730:intron 45.0%
AGTTATTGTGGGGAGCTATG+TGG + chr3.1:68027971-68027990 MS.gene70730:CDS 45.0%
CAACCCTTCAACTCATCATG+AGG + chr3.1:68028874-68028893 MS.gene70730:intron 45.0%
CAATTGCCAAGATGGGATTG+TGG + chr3.1:68029693-68029712 MS.gene70730:CDS 45.0%
CAGCTGCTTCCATTGTGTTT+AGG + chr3.1:68027120-68027139 MS.gene70730:CDS 45.0%
CATTTCACGTTCCTCTAGGT+TGG + chr3.1:68028183-68028202 MS.gene70730:intron 45.0%
CTGGACGTTGCCAACAATAA+TGG - chr3.1:68027013-68027032 None:intergenic 45.0%
GAAGAATCCAGGTTCAGATC+TGG + chr3.1:68027073-68027092 MS.gene70730:CDS 45.0%
GAGTTTGGGGACAAATACAG+AGG + chr3.1:68027883-68027902 MS.gene70730:CDS 45.0%
GATCCCTTTGCATAGGTAGA+AGG - chr3.1:68029248-68029267 None:intergenic 45.0%
GATGACGCCAATTAACACGT+TGG - chr3.1:68026287-68026306 None:intergenic 45.0%
GCAAAGAGGGAATAGAAGGT+TGG + chr3.1:68030065-68030084 MS.gene70730:CDS 45.0%
GGTCCATAACAGAATTCAGC+TGG + chr3.1:68028070-68028089 MS.gene70730:CDS 45.0%
GTCTCATTTCACGTTCCTCT+AGG + chr3.1:68028179-68028198 MS.gene70730:intron 45.0%
GTGCCTTCTACCTATGCAAA+GGG + chr3.1:68029242-68029261 MS.gene70730:intron 45.0%
GTGGGGTATGAAGTATGAAC+TGG + chr3.1:68027726-68027745 MS.gene70730:intron 45.0%
TATGAAACACGGACACTCCT+CGG - chr3.1:68026815-68026834 None:intergenic 45.0%
TGTGCCTTCTACCTATGCAA+AGG + chr3.1:68029241-68029260 MS.gene70730:intron 45.0%
TTACTACTACCTGCTGAGCA+TGG - chr3.1:68027181-68027200 None:intergenic 45.0%
TTATTGTTGGCAACGTCCAG+AGG + chr3.1:68027013-68027032 MS.gene70730:CDS 45.0%
! ACCTCTATGATGCACCCTTT+TGG - chr3.1:68029821-68029840 None:intergenic 45.0%
! CCTCTATGATGCACCCTTTT+GGG - chr3.1:68029820-68029839 None:intergenic 45.0%
! CTCTATGATGCACCCTTTTG+GGG - chr3.1:68029819-68029838 None:intergenic 45.0%
! CTTGCCTCATGATGAGTTGA+AGG - chr3.1:68028881-68028900 None:intergenic 45.0%
! TTCAGGTGGATTTGGTTGGA+GGG + chr3.1:68026442-68026461 MS.gene70730:intron 45.0%
! TTTCAGGTGGATTTGGTTGG+AGG + chr3.1:68026441-68026460 MS.gene70730:intron 45.0%
AATCCAGGTTCAGATCTGGC+TGG + chr3.1:68027077-68027096 MS.gene70730:CDS 50.0%
ACCTCTGCCCACAACACATT+TGG - chr3.1:68026642-68026661 None:intergenic 50.0%
ATGGGCCTAAGTACCCCAAA+AGG + chr3.1:68029803-68029822 MS.gene70730:CDS 50.0%
CCTCTGCCCACAACACATTT+GGG - chr3.1:68026641-68026660 None:intergenic 50.0%
CTTGAGGTTGTCATGTCCTC+TGG - chr3.1:68027032-68027051 None:intergenic 50.0%
GGTTCATAGGGTGCACACAA+GGG + chr3.1:68029872-68029891 MS.gene70730:CDS 50.0%
TGGAGAAACTGCTGCAGCTA+TGG + chr3.1:68027097-68027116 MS.gene70730:CDS 50.0%
TGGGCCTAAGTACCCCAAAA+GGG + chr3.1:68029804-68029823 MS.gene70730:CDS 50.0%
! ACTTTTGCACCATGCTCAGC+AGG + chr3.1:68027169-68027188 MS.gene70730:CDS 50.0%
! CCCAAAAGGGTGCATCATAG+AGG + chr3.1:68029817-68029836 MS.gene70730:CDS 50.0%
! GTCTCACGGGCTATGAAACA+CGG - chr3.1:68026826-68026845 None:intergenic 50.0%
! TTGAAGCACAACGTTCTGGG+AGG + chr3.1:68026250-68026269 MS.gene70730:CDS 50.0%
! TTGGTTGGAGCTTTGGTAGG+AGG + chr3.1:68029937-68029956 MS.gene70730:CDS 50.0%
!! GGCACTAGTGTTTGGTTTGG+TGG + chr3.1:68027230-68027249 MS.gene70730:intron 50.0%
!! GTTGGAGGGTACTATGATGC+AGG + chr3.1:68026456-68026475 MS.gene70730:CDS 50.0%
!!! TGCACCCTTTTGGGGTACTT+AGG - chr3.1:68029811-68029830 None:intergenic 50.0%
CATGGCCCACAATCCCATCT+TGG - chr3.1:68029702-68029721 None:intergenic 55.0%
CCCAAATGTGTTGTGGGCAG+AGG + chr3.1:68026638-68026657 MS.gene70730:CDS 55.0%
GGGTTCATAGGGTGCACACA+AGG + chr3.1:68029871-68029890 MS.gene70730:CDS 55.0%
TCTCCAGCCAGATCTGAACC+TGG - chr3.1:68027083-68027102 None:intergenic 55.0%
TGGTGTGTGCCCCACATTCA+TGG + chr3.1:68028910-68028929 MS.gene70730:intron 55.0%
! AGCTACTATGCGTCGGTGAG+TGG + chr3.1:68027937-68027956 MS.gene70730:CDS 55.0%
! TGCGTCGGTGAGTGGATACA+TGG + chr3.1:68027945-68027964 MS.gene70730:CDS 55.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 68026096 68030125 68026096 ID=MS.gene70730
chr3.1 mRNA 68026096 68030125 68026096 ID=MS.gene70730.t1;Parent=MS.gene70730
chr3.1 exon 68026096 68026338 68026096 ID=MS.gene70730.t1.exon1;Parent=MS.gene70730.t1
chr3.1 CDS 68026096 68026338 68026096 ID=cds.MS.gene70730.t1;Parent=MS.gene70730.t1
chr3.1 exon 68026447 68026659 68026447 ID=MS.gene70730.t1.exon2;Parent=MS.gene70730.t1
chr3.1 CDS 68026447 68026659 68026447 ID=cds.MS.gene70730.t1;Parent=MS.gene70730.t1
chr3.1 exon 68026990 68027190 68026990 ID=MS.gene70730.t1.exon3;Parent=MS.gene70730.t1
chr3.1 CDS 68026990 68027190 68026990 ID=cds.MS.gene70730.t1;Parent=MS.gene70730.t1
chr3.1 exon 68027877 68028131 68027877 ID=MS.gene70730.t1.exon4;Parent=MS.gene70730.t1
chr3.1 CDS 68027877 68028131 68027877 ID=cds.MS.gene70730.t1;Parent=MS.gene70730.t1
chr3.1 exon 68029460 68030125 68029460 ID=MS.gene70730.t1.exon5;Parent=MS.gene70730.t1
chr3.1 CDS 68029460 68030125 68029460 ID=cds.MS.gene70730.t1;Parent=MS.gene70730.t1
Gene Sequence

>MS.gene70730

ATGAAGAATGAGAGACAACAACAACATCATAGAGCTTCTAAAATTCCCAGATTTAAACATCATTGTCACATTTTTCTCTTCATTTTGTTCACTCTTTTTTCCATAACACAATCTTTTGATTATGCTGATGCACTTTCAAAAAGTCTTCTTTACTTTGAAGCACAACGTTCTGGGAGGTTACCATACAACCAACGTGTTAATTGGCGTCATCATTCTGGTCTTACAGATGGTTTAGAACAAGGGGTGAGATCAAAATCATAACTTTTTTCATTTTCTTGATTTTGATGGATTATGATTGTTTTTGTGTAGTTTAAAGTTGAGATTTTTATTTTTGGGTTTGTGTTTTTTCAGGTGGATTTGGTTGGAGGGTACTATGATGCAGGTGATCATGTGAAATTTGGTTTACCAATGGCATTTACTGTCACAATGTTGTCATGGAGTGCTATTGAGTTTAGGCAAGAAATTGTTGAAGCTGGTGAACTTGGTCATGTAATGGAAGCAATTAAATGGGGAACTGATTATTTCATCAAAGCTCATACTAGCCCAAATGTGTTGTGGGCAGAGGTATATTAAAGTCTATTTTGAATTGATTTATTTGAGTTTACATAAACACATGCGAGACTGACACGCCCACACTGCTAATAATTTGAGAAAATCATATAATTCAGTGTAATTATATGTGTTGGTGTCGTGTCCGACACTGTGACATGTCTAATCCGAGGAGTGTCCGTGTTTCATAGCCCGTGAGACTTTTTGAGAAAAGTTATGATAAACAGCAAGTAACATGTTCATAAGCTGTTTTTTCAGCTTATTTCCAATTTTTGAACTTCCTGGTTGATGTGATGATTAATGGATTCAAGAAACAAAATTCTGAAATTAAGGTTTTTTACTTAGGTGGGTGATGGAGACACAGACCATTATTGTTGGCAACGTCCAGAGGACATGACAACCTCAAGACAAGCTTTTAAGATAGATGAGAAGAATCCAGGTTCAGATCTGGCTGGAGAAACTGCTGCAGCTATGGCAGCTGCTTCCATTGTGTTTAGGAAAACAAATCCACATTATTCTCAGCTACTTTTGCACCATGCTCAGCAGGTAGTAGTAACCTCTAAATTGTGCTATATTCACTATAGTGGCACTAGTGTTTGGTTTGGTGGTTTAGTTTAAAATATGAATAATTTATTATGTTTGGAGCTAGTTTGCTTTACCCACTTCATTTTTAAGCACCTTTAACTTTAAGAGACAAGTATTAAAATATGTAAAACAAGGGTAAGATTGTAAATAGCTATTTTGGTCTTTGATTGAGTGAGTTGTTGTTGCATAGTCACATAATGTATCAAAATTACAAAATGTTTTGATTGTGTTTTTTTTTTGGTCAATTTGATTCTTAAACATAGTCACATCCTGTTATATGTTTTGTTAGTCAGTTTGATCCATGAGATTACTAATCAAAGAGACTCGTGAATGTTTTTGGAATTTTGACATATTCATGGACTATAGTGGCATTGTCTCGCATATTTAAGGACCAAAATAACTATTTACTGTAGTTGCCAAGTAATGTTCCTGATAAGTGTGAATGCATAATTTTCTTTTAACAAAACTACTACACTATCAATTTTAAAGGCAAATAGTGGGGTATGAAGTATGAACTGGAAGTAGTTTCAACTGCCAATTAAGTAAAAATATTAGTACAAGTTTAAATTAGTTGTGTTTATATTTTTATAGTAATTGAAAGCAATATTTATTTAATTAGTTAGTTGTATATGTGTACTATTGTGCAGTTATTTGAGTTTGGGGACAAATACAGAGGGAAATATGATGGAAGTGTTGGAGTAGTGAAGAGCTACTATGCGTCGGTGAGTGGATACATGGATGAGTTATTGTGGGGAGCTATGTGGTTGTACAAAGCCACCGACAAACAAGAATATTTTGACTACATTATTTCTAATGCTCATACATTTGGTGGTATTGGTTGGTCCATAACAGAATTCAGCTGGGATGTTAAGTATGCTGGTCTCCAAGTTTTAGCATCAAAGGTAAAATACAAACAAAACAAAAGGGTTTCCTTTAATCACTCTTTTTTGTCTCATTTCACGTTCCTCTAGGTTGGCTTAATTCAAACATGTCAATTTTATAGGTCCATGCTGCTTTTTGCTTTTACTTGGTTTTTTCTTTTCTTTCAAACATTCTAGTATTTTATTTGTGTTGGTTTTCCTTTTTCAATGGCTTATTTCTCGCTGGCTTTGCCTGCATAATGCTTTACTAACATGAAGTCAAAAATAAAATGATGGGTTTAAGACTTAATTTGGTTTGTTCCTTTTACTTTAGTTTCAAAAGTTATTTATCATTTTATTTGATTTGATGGAGCAATATCTAAGGGATATTGTTAATAGGAGTTGAAAATCTTGAAAAGTATACTCAAGAACAATGCCATGTGCAATTGATGCAGTCTATCACAGTTCAATTAAAGTGGTCTGGCTATATGGTTGTGACAAATGTTGAAGTTTCAATGGTTGCAACAATGCCTCCATAAGAATAGACTATAGCTAATATAAATGGTTTGTGAATAGTGCTTATAAACATTATAATTAATTAAAAATTAAGAAACAACAAAATCTTAATGGAAATTATTATCTTAAGTTTTTGATTTGATTTTATCTATTTTATAGATACTCAGCATGCATGTATAGATTTCACTGATATACATGCATTGACTGTCAAAATGGTAATAATGTATGCCACTGATTGCTTATCTGATTGATAGTATGTCTAAACTCTCAACCCTTCAACTCATCATGAGGCAAGCTATTACTATGGTGTGTGCCCCACATTCATGGAATACACACTTTTTATGTTTTCTTCAGGGTTTGCAATAAATCAGTTGGATCCATTGTAAAACTGCTAGAGCACATTTTGGTTACTTGGAGTAGCACTATTTTCCTTATTTACCAATGACTATTCTATATATGCATGTTTAGAAGAAGAAAATTTCAGGGTTCATTCATTATGTTGTTAGTAATGCACAATGATTGATAGTGGATGGAAACATGTGATGTAACACATTGTTCACATGCCTTGCCCTTGATCCATTTGTTATTTTTTGGATAGTGGGCCTTTATTTTGGGCTTTAAGAAACACTTTGAAATGTGCCTTCTACCTATGCAAAGGGATCAACTTTCCACACTCCCACATTTCTAAAAGAACAAATATTTCTGGAAATGTACTTCTGGACGACACATTTTGTCTGAAAATGTACATTTGAAGTGATATTGGGTGTGTAGAAAGCTCTTCCTTATGTAAAAGTTTACTAGTAAATATGTCTTATAAAGTGATTGTGATCTCAATGCAATTGTAACTTTTGTAGTTTTTGATGGATGCAAAACACAATAAGCATGCTGATTTACTAGAACAGTACAAATCAAAAGCAGAGTACTATATATGTTCATGTCTCAACAAAAACAATGGCAGCAGCAATGTGGAAAGAACACCAGCTGGATTACTCTATGTAAGACAGTGGAACAACATGCAATATGTTTCTACAGCAGCATTTCTACTCTCTGTTTACTCTGATTTTCTCCAAAGTGAGAATCAAAAGATCAATTGCCAAGATGGGATTGTGGGCCATGATGAAATTCTCAATTTTGCCAAGTCACAAATTGATTACATTTTGGGCCAAAATCCACTTAACATGAGTTACTTAGTGGGATATGGGCCTAAGTACCCCAAAAGGGTGCATCATAGAGGTGCATCCATTGTATCATATAGAGAGAATAAAGGGTTCATAGGGTGCACACAAGGGTATGATAATTGGTATGGTGTCCAAGAACCAAATCCTAATATTTTGGTTGGAGCTTTGGTAGGAGGACCTGATAATCTAGACAATTTTGAGGATCAAAGGAACAATTATGTGCAAACTGAGGCTTGCACATATAATACTGCACCATTAGTGGGAGTTTTTGCAAAATTCATGCAAAGAGGGAATAGAAGGTTGGTTCATGATTCTGATTCACTTTTAGTTGCTTCCTTTTAA

Protein sequence

>MS.gene70730.t1

MKNERQQQHHRASKIPRFKHHCHIFLFILFTLFSITQSFDYADALSKSLLYFEAQRSGRLPYNQRVNWRHHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWSAIEFRQEIVEAGELGHVMEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRQAFKIDEKNPGSDLAGETAAAMAAASIVFRKTNPHYSQLLLHHAQQLFEFGDKYRGKYDGSVGVVKSYYASVSGYMDELLWGAMWLYKATDKQEYFDYIISNAHTFGGIGWSITEFSWDVKYAGLQVLASKFLMDAKHNKHADLLEQYKSKAEYYICSCLNKNNGSSNVERTPAGLLYVRQWNNMQYVSTAAFLLSVYSDFLQSENQKINCQDGIVGHDEILNFAKSQIDYILGQNPLNMSYLVGYGPKYPKRVHHRGASIVSYRENKGFIGCTQGYDNWYGVQEPNPNILVGALVGGPDNLDNFEDQRNNYVQTEACTYNTAPLVGVFAKFMQRGNRRLVHDSDSLLVASF