AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22342

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22342.t1 MTR_5g009970 96.950 459 14 0 9 467 44 502 0.0 930
MS.gene22342.t1 MTR_5g009970 96.667 420 14 0 48 467 9 428 0.0 846
MS.gene22342.t1 MTR_5g009970 96.509 401 14 0 67 467 1 401 0.0 807
MS.gene22342.t1 MTR_5g010000 87.364 459 58 0 9 467 43 501 0.0 799
MS.gene22342.t1 MTR_5g009970 96.697 333 11 0 135 467 1 333 0.0 669
MS.gene22342.t1 MTR_3g080810 54.212 463 190 9 8 456 37 491 6.01e-178 508
MS.gene22342.t1 MTR_8g104820 48.485 462 220 9 8 456 32 488 1.97e-159 461
MS.gene22342.t1 MTR_3g117500 49.028 463 222 6 9 460 27 486 4.73e-159 459
MS.gene22342.t1 MTR_3g105230 48.526 441 222 4 9 448 33 469 7.44e-159 459
MS.gene22342.t1 MTR_3g023740 48.889 450 227 3 9 458 33 479 4.98e-157 454
MS.gene22342.t1 MTR_5g085730 47.752 467 225 6 9 459 34 497 5.24e-157 455
MS.gene22342.t1 MTR_3g010330 49.231 455 220 6 9 456 28 478 4.79e-156 451
MS.gene22342.t1 MTR_8g099410 50.000 464 213 6 10 458 32 491 4.82e-156 453
MS.gene22342.t1 MTR_8g099410 50.000 464 213 6 10 458 32 491 1.15e-154 453
MS.gene22342.t1 MTR_5g093590 49.247 465 218 7 10 458 38 500 1.17e-153 446
MS.gene22342.t1 MTR_1g088190 49.565 460 199 8 9 458 42 478 1.16e-152 443
MS.gene22342.t1 MTR_4g035955 48.565 453 223 5 9 456 17 464 1.34e-152 442
MS.gene22342.t1 MTR_3g080190 47.323 467 227 6 9 459 43 506 2.16e-151 441
MS.gene22342.t1 MTR_4g035930 47.461 453 228 5 9 456 18 465 5.37e-148 431
MS.gene22342.t1 MTR_4g074960 47.854 466 223 7 9 458 31 492 2.59e-146 432
MS.gene22342.t1 MTR_4g035975 46.767 464 225 9 9 456 30 487 1.50e-143 420
MS.gene22342.t1 MTR_1g037340 47.277 459 226 7 10 458 29 481 6.04e-139 408
MS.gene22342.t1 MTR_3g113720 42.581 465 246 6 10 459 61 519 8.58e-129 384
MS.gene22342.t1 MTR_8g075990 42.704 466 246 7 10 460 67 526 5.01e-121 364
MS.gene22342.t1 MTR_3g090540 39.588 485 245 16 10 458 111 583 1.72e-103 321
MS.gene22342.t1 MTR_2g028480 39.918 486 244 13 10 458 115 589 2.87e-100 313
MS.gene22342.t1 MTR_3g082440 37.347 490 262 15 10 465 120 598 1.76e-91 290
MS.gene22342.t1 MTR_1g088190 47.351 302 130 5 9 301 42 323 1.31e-82 259
MS.gene22342.t1 MTR_7g108925 50.633 158 76 2 301 458 43 198 6.26e-55 183
MS.gene22342.t1 MTR_0393s0050 50.345 145 71 1 301 445 20 163 1.07e-42 149
MS.gene22342.t1 MTR_1g037320 46.250 160 83 1 67 223 1 160 2.57e-39 144
MS.gene22342.t1 MTR_1g037320 50.820 122 59 1 335 456 169 289 1.49e-32 125
MS.gene22342.t1 MTR_4g128810 42.500 160 85 3 308 467 187 339 7.01e-31 122
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22342.t1 AT4G23560 71.460 452 128 1 9 460 26 476 0.0 662
MS.gene22342.t1 AT4G09740 70.133 452 134 1 9 460 26 476 0.0 650
MS.gene22342.t1 AT1G02800 54.031 459 196 7 9 458 46 498 3.92e-174 498
MS.gene22342.t1 AT4G02290 51.422 457 209 6 9 456 55 507 1.15e-167 482
MS.gene22342.t1 AT1G23210 49.451 455 215 7 9 453 31 480 3.28e-161 465
MS.gene22342.t1 AT1G70710 49.119 454 218 6 9 453 31 480 4.76e-161 464
MS.gene22342.t1 AT4G39010 49.569 464 219 7 9 460 32 492 3.11e-160 463
MS.gene22342.t1 AT3G43860 48.894 452 228 3 9 460 37 485 4.57e-153 444
MS.gene22342.t1 AT3G43860 48.894 452 228 3 9 460 37 485 4.57e-153 444
MS.gene22342.t1 AT2G32990 46.753 462 231 5 9 456 42 502 2.45e-151 441
MS.gene22342.t1 AT4G11050 47.425 466 226 6 10 460 30 491 7.38e-151 441
MS.gene22342.t1 AT4G11050 47.425 466 226 6 10 460 30 491 5.85e-150 441
MS.gene22342.t1 AT4G11050 47.425 466 226 6 10 460 30 491 6.60e-150 441
MS.gene22342.t1 AT1G64390 47.414 464 225 6 10 458 29 488 6.34e-149 438
MS.gene22342.t1 AT1G71380 47.930 459 227 7 9 460 27 480 3.14e-148 432
MS.gene22342.t1 AT4G38990 47.639 466 222 8 9 456 26 487 7.95e-148 431
MS.gene22342.t1 AT1G22880 48.366 459 225 7 9 460 27 480 3.96e-147 429
MS.gene22342.t1 AT4G39000 47.403 462 224 9 9 456 28 484 4.94e-147 429
MS.gene22342.t1 AT1G48930 50.217 460 214 5 10 456 34 491 1.32e-143 425
MS.gene22342.t1 AT2G44570 47.930 459 227 7 9 458 36 491 4.81e-143 419
MS.gene22342.t1 AT2G44540 47.712 459 229 5 9 459 36 491 6.88e-143 418
MS.gene22342.t1 AT2G44550 47.149 456 229 6 9 456 36 487 7.20e-141 413
MS.gene22342.t1 AT2G44560 47.162 458 231 5 9 458 36 490 5.54e-138 406
MS.gene22342.t1 AT4G02290 48.120 399 194 6 67 456 1 395 5.44e-133 390
MS.gene22342.t1 AT1G19940 44.518 456 236 6 9 453 51 500 1.16e-131 390
MS.gene22342.t1 AT1G19940 44.518 456 236 6 9 453 51 500 1.16e-131 390
MS.gene22342.t1 AT1G75680 45.374 454 227 8 9 449 60 505 1.62e-129 385
MS.gene22342.t1 AT1G22880 46.135 401 204 7 67 460 1 396 2.36e-120 357
MS.gene22342.t1 AT4G39010 46.369 358 178 6 9 354 32 387 1.22e-112 337
MS.gene22342.t1 AT2G44570 44.474 371 194 7 9 370 36 403 1.97e-98 301
MS.gene22342.t1 AT5G49720 39.139 488 251 13 10 461 112 589 5.51e-97 305
MS.gene22342.t1 AT1G19940 42.737 358 193 4 9 355 51 407 1.22e-93 290
MS.gene22342.t1 AT1G65610 37.551 490 257 17 10 465 120 594 8.14e-93 294
MS.gene22342.t1 AT4G24260 38.945 493 253 14 10 465 112 593 1.40e-92 293
MS.gene22342.t1 AT1G22880 48.000 300 146 5 9 301 27 323 1.40e-86 269
MS.gene22342.t1 AT4G38990 44.543 339 160 6 9 340 26 343 4.77e-86 268
MS.gene22342.t1 AT4G24260 36.554 383 200 12 10 355 112 488 1.41e-56 195
MS.gene22342.t1 AT4G24260 38.339 313 154 10 10 287 112 420 2.47e-50 177
MS.gene22342.t1 AT3G42153 54.348 92 38 1 212 299 16 107 8.77e-28 107

Find 105 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCCCTCCACTTCACTCTT+TGG 0.212758 5.1:+3448945 None:intergenic
ATATCTTTGGCAGGTGAATT+TGG 0.221903 5.1:-3448192 MS.gene22342:intron
TCAATCTTGTAAAGTGTTCT+TGG 0.279231 5.1:+3447591 None:intergenic
TCAGCTGCAGCCTCAGTTCC+AGG 0.287596 5.1:+3447558 None:intergenic
CAGATCTTGCATCATTAAAT+TGG 0.290399 5.1:+3446202 None:intergenic
GATTTCAGAGGATGTGAAAT+TGG 0.308600 5.1:+3446571 None:intergenic
ATCTGTAGAGAGTAACTTCC+TGG 0.323240 5.1:+3446835 None:intergenic
CACTTCACTCTTTGGTCTTT+AGG 0.330155 5.1:+3448953 None:intergenic
TATATGAATGCTGCGTTCAT+AGG 0.331549 5.1:-3446153 MS.gene22342:CDS
ATGTCATACATGGTGGGATA+TGG 0.339226 5.1:-3446393 MS.gene22342:CDS
ATAGCACCCACATGAATATT+AGG 0.348295 5.1:+3446249 None:intergenic
TCTCCGCCGTGCTATTCGTT+GGG 0.366022 5.1:-3448042 MS.gene22342:CDS
TACAGTCAGCTTATTGAGTT+GGG 0.376730 5.1:-3448114 MS.gene22342:CDS
GCACAATGGTTGCTAGTATA+TGG 0.379276 5.1:-3449702 MS.gene22342:intron
TCATTGCAATCCACTTTAGC+TGG 0.382872 5.1:+3446309 None:intergenic
CCCACATGAATATTAGGATT+AGG 0.392902 5.1:+3446255 None:intergenic
ATCTCCGCCGTGCTATTCGT+TGG 0.402115 5.1:-3448043 MS.gene22342:CDS
AATATTAGGATTAGGATTAG+AGG 0.403218 5.1:+3446263 None:intergenic
TTAAATTGGTCATTAAAATC+AGG 0.410829 5.1:+3446216 None:intergenic
AGCTGGGACAACAAATTTGT+TGG 0.410959 5.1:-3447073 MS.gene22342:CDS
CAAAGTTCACCCAGCTAAAG+TGG 0.412258 5.1:-3446319 MS.gene22342:CDS
CCTCTGTGATGTAATTGCTT+TGG 0.412449 5.1:+3446360 None:intergenic
ACCGAAAGGATGAACTGTTA+TGG 0.414159 5.1:-3447189 MS.gene22342:intron
CAAGTACTTGCTTTCTCCAC+TGG 0.416765 5.1:+3447144 None:intergenic
CACCATGTATGACATCTTCA+TGG 0.417078 5.1:+3446401 None:intergenic
CCATTCTACTGCTCGTACTC+TGG 0.417471 5.1:-3447316 MS.gene22342:CDS
GCTGGGTGAACTTTGATTGA+AGG 0.420828 5.1:+3446327 None:intergenic
CTTGGAGTATCCATGTCTTC+CGG 0.422002 5.1:+3447609 None:intergenic
GCTGGTGATAATGTCAAGTT+TGG 0.423084 5.1:-3448152 MS.gene22342:CDS
AACTGTTATGGGCTGCTGCT+TGG 0.428578 5.1:-3447177 MS.gene22342:CDS
TTGATTGCCGAAATTAAAAC+CGG 0.431224 5.1:-3446117 MS.gene22342:CDS
AGGCAGCGTCTGAGTTCAGC+TGG 0.451630 5.1:-3447090 MS.gene22342:CDS
AGATAACCAAGGTTGGAATC+AGG 0.451903 5.1:-3447110 MS.gene22342:CDS
GCTAAAGTGGATTGCAATGA+TGG 0.456802 5.1:-3446306 MS.gene22342:CDS
CTTTGGCAGGTGAATTTGGT+TGG 0.458373 5.1:-3448188 MS.gene22342:intron
TTCACCATCACTATGAATCT+TGG 0.458528 5.1:+3446879 None:intergenic
TGGAACTGAGGCTGCAGCTG+AGG 0.459683 5.1:-3447556 MS.gene22342:CDS
TAGTACCATGGTTGAGGTTG+TGG 0.461334 5.1:+3446652 None:intergenic
TCATCAATGTTGGGAGCGTC+CGG 0.461447 5.1:-3447628 MS.gene22342:CDS
CCGAAAGGATGAACTGTTAT+GGG 0.463366 5.1:-3447188 MS.gene22342:intron
ATTCATGTGGGTGCTATTGT+TGG 0.466637 5.1:-3446243 MS.gene22342:CDS
TTACAGTCAGCTTATTGAGT+TGG 0.467244 5.1:-3448115 MS.gene22342:CDS
TACAACTATGCAGATGCTCT+TGG 0.494973 5.1:-3449019 MS.gene22342:intron
GTGAACTTTGATTGAAGGAA+TGG 0.507187 5.1:+3446332 None:intergenic
AAGATTGATGCTAATTCCCC+TGG 0.508528 5.1:-3447576 MS.gene22342:CDS
AAACGCAGATCATCAATGTT+GGG 0.510319 5.1:-3447637 MS.gene22342:CDS
CCAGAGTACGAGCAGTAGAA+TGG 0.510375 5.1:+3447316 None:intergenic
CTACAGATCAAAACAACTCC+TGG 0.510497 5.1:-3446820 MS.gene22342:intron
ACATAGGTGGACTACATACT+AGG 0.511456 5.1:-3446432 MS.gene22342:intron
GAAACGCAGATCATCAATGT+TGG 0.511702 5.1:-3447638 MS.gene22342:CDS
CACGGCGGAGATAATCAATC+TGG 0.513292 5.1:+3448054 None:intergenic
TTTATATGTGCATTGATGCC+AGG 0.514115 5.1:-3446853 MS.gene22342:CDS
ACGCTGCCTGATTCCAACCT+TGG 0.518138 5.1:+3447104 None:intergenic
CAGCTGCAGCCTCAGTTCCA+GGG 0.523289 5.1:+3447559 None:intergenic
GGAATTCTATGGTGGGAAGA+AGG 0.526288 5.1:-3446908 MS.gene22342:CDS
CATGTGGGTGCTATTGTTGG+AGG 0.529821 5.1:-3446240 MS.gene22342:CDS
TCCTAATCCTAATATTCATG+TGG 0.530984 5.1:-3446256 MS.gene22342:CDS
GAACGCAGCATTCATATAAG+TGG 0.537189 5.1:+3446158 None:intergenic
GCCTGTGTGAAGAGCGTGGT+TGG 0.537258 5.1:+3447987 None:intergenic
TGGCAGGTGAATTTGGTTGG+AGG 0.540826 5.1:-3448185 MS.gene22342:intron
AATGAATAGTACCATGGTTG+AGG 0.541527 5.1:+3446646 None:intergenic
TGCTAATTCCCCTGGAACTG+AGG 0.542113 5.1:-3447568 MS.gene22342:CDS
TGCAAAGGCTCTGATTTCAG+AGG 0.549636 5.1:+3446559 None:intergenic
CAGAGCCTTTGCAAAATCAC+AGG 0.555689 5.1:-3446549 MS.gene22342:intron
GGAGACTCAGCTCTCTCTGA+TGG 0.562146 5.1:-3448926 MS.gene22342:CDS
GTTGGAGGATACTATGATGC+TGG 0.563481 5.1:-3448170 MS.gene22342:CDS
ACATCACAGATAACCAAGGT+TGG 0.565178 5.1:-3447117 MS.gene22342:CDS
TTGGGAGCGTCCGGAAGACA+TGG 0.572244 5.1:-3447619 MS.gene22342:CDS
CATTGCAATCCACTTTAGCT+GGG 0.572753 5.1:+3446310 None:intergenic
TGTGATTGCTAGGTTGGAGA+AGG 0.581440 5.1:-3447660 MS.gene22342:intron
GGCTGCTGCTTGGTTATACA+AGG 0.582101 5.1:-3447167 MS.gene22342:CDS
AGCTGCAGCCTCAGTTCCAG+GGG 0.585982 5.1:+3447560 None:intergenic
GACCAAAGAGTGAAGTGGAG+GGG 0.590017 5.1:-3448947 MS.gene22342:CDS
AAGCTGACTGTAAATGACAT+TGG 0.590276 5.1:+3448125 None:intergenic
GTGATAATGTCAAGTTTGGA+TGG 0.592513 5.1:-3448148 MS.gene22342:CDS
GGAGAAAATGAATAGTACCA+TGG 0.593160 5.1:+3446640 None:intergenic
AAGTATAGAGGCACCTACAC+GGG 0.600830 5.1:-3447346 MS.gene22342:CDS
AGACCAAAGAGTGAAGTGGA+GGG 0.601742 5.1:-3448948 MS.gene22342:CDS
ACCATGTATGACATCTTCAT+GGG 0.604739 5.1:+3446402 None:intergenic
TGAAATTGGTAGAGCCACAA+TGG 0.606299 5.1:+3446585 None:intergenic
TCCCATGAAGATGTCATACA+TGG 0.607679 5.1:-3446403 MS.gene22342:CDS
CATATTGATGGAATCCATTG+TGG 0.608291 5.1:-3446599 MS.gene22342:CDS
CCTAATCCTAATATTCATGT+GGG 0.608435 5.1:-3446255 MS.gene22342:CDS
CTCCGCCGTGCTATTCGTTG+GGG 0.608919 5.1:-3448041 MS.gene22342:CDS
CAAGTATAGAGGCACCTACA+CGG 0.612002 5.1:-3447347 MS.gene22342:CDS
GCAGCATTCATATAAGTGGT+AGG 0.613722 5.1:+3446162 None:intergenic
TTTACTAGGAATTCTATGGT+GGG 0.615507 5.1:-3446915 MS.gene22342:intron
TTAGCCAAGATTCATAGTGA+TGG 0.625051 5.1:-3446883 MS.gene22342:CDS
AGTTCAAACATTACTAACAC+AGG 0.627457 5.1:-3447050 MS.gene22342:intron
ATGAAGATGTCATACATGGT+GGG 0.629064 5.1:-3446399 MS.gene22342:CDS
TGATTGCCGAAATTAAAACC+GGG 0.629615 5.1:-3446116 MS.gene22342:CDS
TCCAACCACGCTCTTCACAC+AGG 0.632498 5.1:-3447988 MS.gene22342:intron
AAGACCAAAGAGTGAAGTGG+AGG 0.641884 5.1:-3448949 MS.gene22342:CDS
GGCAGCGTCTGAGTTCAGCT+GGG 0.647866 5.1:-3447089 MS.gene22342:CDS
GAATGGACAAGAACCCGTGT+AGG 0.649143 5.1:+3447333 None:intergenic
CATGAAGATGTCATACATGG+TGG 0.650028 5.1:-3446400 MS.gene22342:CDS
CTAAAGACCAAAGAGTGAAG+TGG 0.653325 5.1:-3448952 MS.gene22342:CDS
ATACACCACAACCTCAACCA+TGG 0.664872 5.1:-3446657 MS.gene22342:CDS
ACAAAGCCCTAATGGCACAA+TGG 0.665838 5.1:-3449716 None:intergenic
GCTTGGTTATACAAGGCCAG+TGG 0.674115 5.1:-3447160 MS.gene22342:CDS
TTGTACCCCAACGAATAGCA+CGG 0.684450 5.1:+3448036 None:intergenic
AAGTACATCACAGATAACCA+AGG 0.712270 5.1:-3447121 MS.gene22342:CDS
ACATGCCTGTGTGAAGAGCG+TGG 0.726142 5.1:+3447983 None:intergenic
CCAAAGCAATTACATCACAG+AGG 0.748019 5.1:-3446360 MS.gene22342:CDS
TACCCCAACGAATAGCACGG+CGG 0.808256 5.1:+3448039 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTAAAAAAAATATTATGAT+CGG - chr5.1:3447550-3447569 MS.gene22342:CDS 10.0%
!!! AAATGTTTTTAATAATTTGA+TGG - chr5.1:3447321-3447340 MS.gene22342:CDS 10.0%
!!! TTTAATTTATATACAATGTT+TGG + chr5.1:3447411-3447430 None:intergenic 10.0%
!! CTAAATAAAAATCATATTGA+TGG - chr5.1:3449201-3449220 MS.gene22342:intron 15.0%
!! GTTAACACTTATTATTAATA+TGG - chr5.1:3446263-3446282 MS.gene22342:CDS 15.0%
!!! ATGATTTTTATTTAGGATTT+TGG + chr5.1:3449196-3449215 None:intergenic 15.0%
!!! CATCAATATGATTTTTATTT+AGG + chr5.1:3449203-3449222 None:intergenic 15.0%
!! AAACATGCTTGTATTTATAA+GGG + chr5.1:3446609-3446628 None:intergenic 20.0%
!! AATAATGTCTTCATGATTAA+TGG - chr5.1:3446383-3446402 MS.gene22342:CDS 20.0%
!! ACTTTAATTAGTCATAATCA+TGG + chr5.1:3447533-3447552 None:intergenic 20.0%
!! ATGAAGCAAAATAAAGAAAT+GGG + chr5.1:3449327-3449346 None:intergenic 20.0%
!! ATTAAGTTATTTATCCGTAA+AGG + chr5.1:3447864-3447883 None:intergenic 20.0%
!! ATTATAGTGAGATTAGAATA+TGG - chr5.1:3447011-3447030 MS.gene22342:intron 20.0%
!! GCATATTTAACAATTAAAGT+CGG + chr5.1:3446436-3446455 None:intergenic 20.0%
!! GTAAACTATATGAAGTTAAA+GGG - chr5.1:3446354-3446373 MS.gene22342:CDS 20.0%
!! TAAACATGCTTGTATTTATA+AGG + chr5.1:3446610-3446629 None:intergenic 20.0%
!! TATATCAGATTGTTACTATA+TGG + chr5.1:3448815-3448834 None:intergenic 20.0%
!! TATGAAGCAAAATAAAGAAA+TGG + chr5.1:3449328-3449347 None:intergenic 20.0%
!! TCATGTGTATTATATATCTT+TGG - chr5.1:3447607-3447626 MS.gene22342:CDS 20.0%
!! TTAAATTGGTCATTAAAATC+AGG + chr5.1:3449599-3449618 None:intergenic 20.0%
!! TTAAGTTATTTATCCGTAAA+GGG + chr5.1:3447863-3447882 None:intergenic 20.0%
!! TTAATGAGTTAATTCTTTCT+TGG + chr5.1:3448857-3448876 None:intergenic 20.0%
!! TTATAGTGAGATTAGAATAT+GGG - chr5.1:3447012-3447031 MS.gene22342:intron 20.0%
!! TTTGTAAATTCCTATCATAT+TGG - chr5.1:3446537-3446556 MS.gene22342:intron 20.0%
!!! TTTTTTTACTAGGAATTCTA+TGG - chr5.1:3448893-3448912 MS.gene22342:intron 20.0%
! AAATGAATGAGAATGATACT+AGG + chr5.1:3448579-3448598 None:intergenic 25.0%
! AACATGCTTGTATTTATAAG+GGG + chr5.1:3446608-3446627 None:intergenic 25.0%
! AATATTAGGATTAGGATTAG+AGG + chr5.1:3449552-3449571 None:intergenic 25.0%
! AATTAAATCCTCATCCATTA+TGG + chr5.1:3446752-3446771 None:intergenic 25.0%
! AGAAAGATTTATGAATTGTG+TGG + chr5.1:3446503-3446522 None:intergenic 25.0%
! AGCTAACATATTATAGTAGT+CGG - chr5.1:3446290-3446309 MS.gene22342:CDS 25.0%
! AGTACTTTGTCATGATATAT+AGG + chr5.1:3448048-3448067 None:intergenic 25.0%
! AGTATCAATTCCAATATGAT+AGG + chr5.1:3446550-3446569 None:intergenic 25.0%
! AGTCATAGGTAAAGTAATTA+AGG + chr5.1:3447585-3447604 None:intergenic 25.0%
! ATCAAGAAATCTATCAAAAG+GGG - chr5.1:3447149-3447168 MS.gene22342:CDS 25.0%
! ATTATATTTGTAGTGTTACC+AGG + chr5.1:3449013-3449032 None:intergenic 25.0%
! ATTTATGAATTGTGTGGAAT+GGG + chr5.1:3446497-3446516 None:intergenic 25.0%
! CGTAAACTATATGAAGTTAA+AGG - chr5.1:3446353-3446372 MS.gene22342:CDS 25.0%
! GATCAAGAAATCTATCAAAA+GGG - chr5.1:3447148-3447167 MS.gene22342:CDS 25.0%
! GTACTTTGTCATGATATATA+GGG + chr5.1:3448047-3448066 None:intergenic 25.0%
! GTATCATTCTCATTCATTTA+TGG - chr5.1:3448580-3448599 MS.gene22342:intron 25.0%
! TGATCAAGAAATCTATCAAA+AGG - chr5.1:3447147-3447166 MS.gene22342:CDS 25.0%
!! AGTTAAGTTTTTAATGCATG+AGG - chr5.1:3447043-3447062 MS.gene22342:intron 25.0%
!! ATATATCAAGTAGAGTACTT+AGG - chr5.1:3446637-3446656 MS.gene22342:CDS 25.0%
!! GTTAAGTTTTTAATGCATGA+GGG - chr5.1:3447044-3447063 MS.gene22342:intron 25.0%
!! TATATCAAGTAGAGTACTTA+GGG - chr5.1:3446638-3446657 MS.gene22342:CDS 25.0%
!! TTAAGTTTTTAATGCATGAG+GGG - chr5.1:3447045-3447064 MS.gene22342:intron 25.0%
!!! ATTTGCTATATTGTTAACTC+AGG - chr5.1:3449096-3449115 MS.gene22342:intron 25.0%
!!! TTTACGTGTTTTTTTTCTAG+AGG + chr5.1:3446339-3446358 None:intergenic 25.0%
AATATTTAACCTGCAACACA+AGG + chr5.1:3448108-3448127 None:intergenic 30.0%
AATTGATACTTAAGTAGAGG+TGG - chr5.1:3446560-3446579 MS.gene22342:CDS 30.0%
ACCATTATTCTTACTACTCA+TGG + chr5.1:3446722-3446741 None:intergenic 30.0%
AGTTCAAACATTACTAACAC+AGG - chr5.1:3448762-3448781 MS.gene22342:intron 30.0%
ATTGAATGCGTACATAACAT+AGG - chr5.1:3449364-3449383 MS.gene22342:intron 30.0%
CAGATCTTGCATCATTAAAT+TGG + chr5.1:3449613-3449632 None:intergenic 30.0%
CATGATATATAGGGTAAGTT+TGG + chr5.1:3448038-3448057 None:intergenic 30.0%
CCTAATCCTAATATTCATGT+GGG - chr5.1:3449557-3449576 MS.gene22342:intron 30.0%
GAAACAAAAAATGACAGCTA+TGG + chr5.1:3446143-3446162 None:intergenic 30.0%
GATTTATGAATTGTGTGGAA+TGG + chr5.1:3446498-3446517 None:intergenic 30.0%
GTGTATTATATATCTTTGGC+AGG - chr5.1:3447611-3447630 MS.gene22342:CDS 30.0%
TAAGAATTGTTGTGATTGCT+AGG - chr5.1:3448142-3448161 MS.gene22342:CDS 30.0%
TAATACACATGATCAGTCAT+AGG + chr5.1:3447599-3447618 None:intergenic 30.0%
TAATGGTCTATTAGCCATAA+TGG - chr5.1:3446735-3446754 MS.gene22342:intron 30.0%
TCAAGAAATCTATCAAAAGG+GGG - chr5.1:3447150-3447169 MS.gene22342:CDS 30.0%
TCCTAATCCTAATATTCATG+TGG - chr5.1:3449556-3449575 MS.gene22342:intron 30.0%
TCTATAGTTACACATATGAG+TGG + chr5.1:3447284-3447303 None:intergenic 30.0%
TGGAATTGATACTTAAGTAG+AGG - chr5.1:3446557-3446576 MS.gene22342:CDS 30.0%
TGTGTTGCAGGTTAAATATT+TGG - chr5.1:3448108-3448127 MS.gene22342:CDS 30.0%
TTGAATGTTATTGCATGAGA+GGG - chr5.1:3447471-3447490 MS.gene22342:CDS 30.0%
TTGATTGCCGAAATTAAAAC+CGG - chr5.1:3449695-3449714 MS.gene22342:intron 30.0%
TTGTCCTTCAAAAAACAAGA+TGG + chr5.1:3446824-3446843 None:intergenic 30.0%
TTTACGTGTACTAGTCATTA+TGG + chr5.1:3446467-3446486 None:intergenic 30.0%
TTTACTAGGAATTCTATGGT+GGG - chr5.1:3448897-3448916 MS.gene22342:intron 30.0%
! AAATACCTGTGATTTTGCAA+AGG + chr5.1:3449271-3449290 None:intergenic 30.0%
! GAGAGACTGTTAATAACTTT+TGG + chr5.1:3447978-3447997 None:intergenic 30.0%
! TCAATCTTGTAAAGTGTTCT+TGG + chr5.1:3448224-3448243 None:intergenic 30.0%
! TTTTACTAGGAATTCTATGG+TGG - chr5.1:3448896-3448915 MS.gene22342:intron 30.0%
! TTTTTGAATTGTGTACCGAA+AGG - chr5.1:3448609-3448628 MS.gene22342:intron 30.0%
!! ACATGTTCATAAGCTGTTTT+CGG + chr5.1:3447941-3447960 None:intergenic 30.0%
!!! AAAGCCATCTTGTTTTTTGA+AGG - chr5.1:3446817-3446836 MS.gene22342:intron 30.0%
AAACGCAGATCATCAATGTT+GGG - chr5.1:3448175-3448194 MS.gene22342:CDS 35.0%
AAGCTGACTGTAAATGACAT+TGG + chr5.1:3447690-3447709 None:intergenic 35.0%
AAGTAAGAAATTGCAGCTTG+TGG - chr5.1:3448524-3448543 MS.gene22342:intron 35.0%
AAGTACATCACAGATAACCA+AGG - chr5.1:3448691-3448710 MS.gene22342:intron 35.0%
AATGAATAGTACCATGGTTG+AGG + chr5.1:3449169-3449188 None:intergenic 35.0%
AATTGTTGTGATTGCTAGGT+TGG - chr5.1:3448146-3448165 MS.gene22342:CDS 35.0%
ACAAGCTGCAATTTCTTACT+TGG + chr5.1:3448525-3448544 None:intergenic 35.0%
ACCATGTATGACATCTTCAT+GGG + chr5.1:3449413-3449432 None:intergenic 35.0%
ATACTTAAGTAGAGGTGGTT+AGG - chr5.1:3446565-3446584 MS.gene22342:CDS 35.0%
ATAGCACCCACATGAATATT+AGG + chr5.1:3449566-3449585 None:intergenic 35.0%
ATATCTTTGGCAGGTGAATT+TGG - chr5.1:3447620-3447639 MS.gene22342:CDS 35.0%
ATGAAGATGTCATACATGGT+GGG - chr5.1:3449413-3449432 MS.gene22342:intron 35.0%
CATATTGATGGAATCCATTG+TGG - chr5.1:3449213-3449232 MS.gene22342:intron 35.0%
CCCACATGAATATTAGGATT+AGG + chr5.1:3449560-3449579 None:intergenic 35.0%
CGATAAGAAGATGACATATG+GGG - chr5.1:3446193-3446212 MS.gene22342:CDS 35.0%
CTTGAATGTTATTGCATGAG+AGG - chr5.1:3447470-3447489 MS.gene22342:CDS 35.0%
GATTTCAGAGGATGTGAAAT+TGG + chr5.1:3449244-3449263 None:intergenic 35.0%
GCCATGAGTAGTAAGAATAA+TGG - chr5.1:3446718-3446737 MS.gene22342:intron 35.0%
GCGATAAGAAGATGACATAT+GGG - chr5.1:3446192-3446211 MS.gene22342:CDS 35.0%
GGAGAAAATGAATAGTACCA+TGG + chr5.1:3449175-3449194 None:intergenic 35.0%
GTGAACTTTGATTGAAGGAA+TGG + chr5.1:3449483-3449502 None:intergenic 35.0%
TACAGTCAGCTTATTGAGTT+GGG - chr5.1:3447698-3447717 MS.gene22342:intron 35.0%
TATATGAATGCTGCGTTCAT+AGG - chr5.1:3449659-3449678 MS.gene22342:intron 35.0%
TGATAAGTGGTTTGATCTTG+TGG - chr5.1:3446692-3446711 MS.gene22342:CDS 35.0%
TGATTGCCGAAATTAAAACC+GGG - chr5.1:3449696-3449715 MS.gene22342:intron 35.0%
TGCATAGTTGTAACTAGATG+AGG + chr5.1:3446785-3446804 None:intergenic 35.0%
TGCGATAAGAAGATGACATA+TGG - chr5.1:3446191-3446210 MS.gene22342:CDS 35.0%
TGCTATATTGTTAACTCAGG+TGG - chr5.1:3449099-3449118 MS.gene22342:intron 35.0%
TTACAGTCAGCTTATTGAGT+TGG - chr5.1:3447697-3447716 MS.gene22342:intron 35.0%
TTAGCCAAGATTCATAGTGA+TGG - chr5.1:3448929-3448948 MS.gene22342:CDS 35.0%
TTCACCATCACTATGAATCT+TGG + chr5.1:3448936-3448955 None:intergenic 35.0%
! GATTTTGCTGACAAGTATAG+AGG - chr5.1:3448454-3448473 MS.gene22342:intron 35.0%
! GGGTTCTATTTGTTGATAAG+TGG - chr5.1:3446679-3446698 MS.gene22342:CDS 35.0%
! GTGATAATGTCAAGTTTGGA+TGG - chr5.1:3447664-3447683 MS.gene22342:intron 35.0%
! GTTACACATATGAGTGGTTT+TGG + chr5.1:3447278-3447297 None:intergenic 35.0%
! TTTATATGTGCATTGATGCC+AGG - chr5.1:3448959-3448978 MS.gene22342:CDS 35.0%
!! GCTATTTTCACAAGCTATCT+TGG - chr5.1:3447897-3447916 MS.gene22342:intron 35.0%
!! TCTATTAGCCATAATGGATG+AGG - chr5.1:3446741-3446760 MS.gene22342:intron 35.0%
!!! CATAGTCCCGGTTTTAATTT+CGG + chr5.1:3449705-3449724 None:intergenic 35.0%
AAGATGACATATGGGGCAAA+AGG - chr5.1:3446200-3446219 MS.gene22342:CDS 40.0%
AAGATTGATGCTAATTCCCC+TGG - chr5.1:3448236-3448255 MS.gene22342:intron 40.0%
AATCATGGCAGATTGAGAGA+GGG + chr5.1:3447518-3447537 None:intergenic 40.0%
AATGTTATTGCATGAGAGGG+AGG - chr5.1:3447474-3447493 MS.gene22342:CDS 40.0%
ACATCACAGATAACCAAGGT+TGG - chr5.1:3448695-3448714 MS.gene22342:intron 40.0%
ACCGAAAGGATGAACTGTTA+TGG - chr5.1:3448623-3448642 MS.gene22342:intron 40.0%
AGATAACCAAGGTTGGAATC+AGG - chr5.1:3448702-3448721 MS.gene22342:intron 40.0%
AGCTGGGACAACAAATTTGT+TGG - chr5.1:3448739-3448758 MS.gene22342:intron 40.0%
ATCTGTAGAGAGTAACTTCC+TGG + chr5.1:3448980-3448999 None:intergenic 40.0%
CACCATGTATGACATCTTCA+TGG + chr5.1:3449414-3449433 None:intergenic 40.0%
CATGAAGATGTCATACATGG+TGG - chr5.1:3449412-3449431 MS.gene22342:intron 40.0%
CATTGCAATCCACTTTAGCT+GGG + chr5.1:3449505-3449524 None:intergenic 40.0%
CCAAAGCAATTACATCACAG+AGG - chr5.1:3449452-3449471 MS.gene22342:intron 40.0%
CCCATAACAGTTCATCCTTT+CGG + chr5.1:3448627-3448646 None:intergenic 40.0%
CCGAAAGGATGAACTGTTAT+GGG - chr5.1:3448624-3448643 MS.gene22342:intron 40.0%
CCTCTGTGATGTAATTGCTT+TGG + chr5.1:3449455-3449474 None:intergenic 40.0%
CTAAAGACCAAAGAGTGAAG+TGG - chr5.1:3446860-3446879 MS.gene22342:CDS 40.0%
CTACAGATCAAAACAACTCC+TGG - chr5.1:3448992-3449011 MS.gene22342:CDS 40.0%
GAAACGCAGATCATCAATGT+TGG - chr5.1:3448174-3448193 MS.gene22342:CDS 40.0%
GAACGCAGCATTCATATAAG+TGG + chr5.1:3449657-3449676 None:intergenic 40.0%
GAATGCGTACATAACATAGG+TGG - chr5.1:3449367-3449386 MS.gene22342:intron 40.0%
GCACAATGGTTGCTAGTATA+TGG - chr5.1:3446110-3446129 MS.gene22342:CDS 40.0%
GCAGCATTCATATAAGTGGT+AGG + chr5.1:3449653-3449672 None:intergenic 40.0%
TAATCATGGCAGATTGAGAG+AGG + chr5.1:3447519-3447538 None:intergenic 40.0%
TACAACTATGCAGATGCTCT+TGG - chr5.1:3446793-3446812 MS.gene22342:intron 40.0%
TCATTGCAATCCACTTTAGC+TGG + chr5.1:3449506-3449525 None:intergenic 40.0%
TCCCATGAAGATGTCATACA+TGG - chr5.1:3449409-3449428 MS.gene22342:intron 40.0%
TGAAATTGGTAGAGCCACAA+TGG + chr5.1:3449230-3449249 None:intergenic 40.0%
! AGAGTACTTAGGGCTTAAGA+GGG - chr5.1:3446648-3446667 MS.gene22342:CDS 40.0%
! ATGTCATACATGGTGGGATA+TGG - chr5.1:3449419-3449438 MS.gene22342:intron 40.0%
! CACTTCACTCTTTGGTCTTT+AGG + chr5.1:3446862-3446881 None:intergenic 40.0%
! CATGTTTCTATGGCCCTTTA+CGG - chr5.1:3447847-3447866 MS.gene22342:intron 40.0%
! GCTGGTGATAATGTCAAGTT+TGG - chr5.1:3447660-3447679 MS.gene22342:intron 40.0%
! TAGAGTACTTAGGGCTTAAG+AGG - chr5.1:3446647-3446666 MS.gene22342:CDS 40.0%
! TTCACACAGGCATGTTTCTA+TGG - chr5.1:3447837-3447856 MS.gene22342:intron 40.0%
!! ACATAGGTGGACTACATACT+AGG - chr5.1:3449380-3449399 MS.gene22342:intron 40.0%
!! ATTCATGTGGGTGCTATTGT+TGG - chr5.1:3449569-3449588 MS.gene22342:intron 40.0%
!! GCTAAAGTGGATTGCAATGA+TGG - chr5.1:3449506-3449525 MS.gene22342:intron 40.0%
!! TTTTTGAAGGACAACGCTCA+GGG - chr5.1:3446830-3446849 MS.gene22342:CDS 40.0%
!!! TTTTTTGAAGGACAACGCTC+AGG - chr5.1:3446829-3446848 MS.gene22342:CDS 40.0%
AAGACCAAAGAGTGAAGTGG+AGG - chr5.1:3446863-3446882 MS.gene22342:CDS 45.0%
AGACCAAAGAGTGAAGTGGA+GGG - chr5.1:3446864-3446883 MS.gene22342:CDS 45.0%
ATACACCACAACCTCAACCA+TGG - chr5.1:3449155-3449174 MS.gene22342:intron 45.0%
ATCATGGCAGATTGAGAGAG+GGG + chr5.1:3447517-3447536 None:intergenic 45.0%
CAAAGTTCACCCAGCTAAAG+TGG - chr5.1:3449493-3449512 MS.gene22342:intron 45.0%
CAAGTACTTGCTTTCTCCAC+TGG + chr5.1:3448671-3448690 None:intergenic 45.0%
CAGAGCCTTTGCAAAATCAC+AGG - chr5.1:3449263-3449282 MS.gene22342:intron 45.0%
CTTTGGCAGGTGAATTTGGT+TGG - chr5.1:3447624-3447643 MS.gene22342:CDS 45.0%
GAGTACTTAGGGCTTAAGAG+GGG - chr5.1:3446649-3446668 MS.gene22342:CDS 45.0%
GCTGGGTGAACTTTGATTGA+AGG + chr5.1:3449488-3449507 None:intergenic 45.0%
GTACATATGCCTTGTGTTGC+AGG - chr5.1:3448096-3448115 MS.gene22342:CDS 45.0%
GTTGGAGGATACTATGATGC+TGG - chr5.1:3447642-3447661 MS.gene22342:CDS 45.0%
TAGTACCATGGTTGAGGTTG+TGG + chr5.1:3449163-3449182 None:intergenic 45.0%
TTGTACCCCAACGAATAGCA+CGG + chr5.1:3447779-3447798 None:intergenic 45.0%
! CTTGGAGTATCCATGTCTTC+CGG + chr5.1:3448206-3448225 None:intergenic 45.0%
! GGAATTCTATGGTGGGAAGA+AGG - chr5.1:3448904-3448923 MS.gene22342:intron 45.0%
! TGCAAAGGCTCTGATTTCAG+AGG + chr5.1:3449256-3449275 None:intergenic 45.0%
! TGTGATTGCTAGGTTGGAGA+AGG - chr5.1:3448152-3448171 MS.gene22342:CDS 45.0%
!! AAGTATAGAGGCACCTACAC+GGG - chr5.1:3448466-3448485 MS.gene22342:intron 45.0%
!! CAAGTATAGAGGCACCTACA+CGG - chr5.1:3448465-3448484 MS.gene22342:intron 45.0%
!! ATAATAAACTATAATATAAT+TGG + chr5.1:3446166-3446185 None:intergenic 5.0%
!! TAATAAACTATAATATAATT+GGG + chr5.1:3446165-3446184 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTACT+AGG - chr5.1:3448883-3448902 MS.gene22342:intron 5.0%
CACGGCGGAGATAATCAATC+TGG + chr5.1:3447761-3447780 None:intergenic 50.0%
CCAGAGTACGAGCAGTAGAA+TGG + chr5.1:3448499-3448518 None:intergenic 50.0%
CCATTCTACTGCTCGTACTC+TGG - chr5.1:3448496-3448515 MS.gene22342:intron 50.0%
GAATGGACAAGAACCCGTGT+AGG + chr5.1:3448482-3448501 None:intergenic 50.0%
GACCAAAGAGTGAAGTGGAG+GGG - chr5.1:3446865-3446884 MS.gene22342:CDS 50.0%
GCTTGGTTATACAAGGCCAG+TGG - chr5.1:3448652-3448671 MS.gene22342:intron 50.0%
TGCTAATTCCCCTGGAACTG+AGG - chr5.1:3448244-3448263 MS.gene22342:intron 50.0%
TGGCAGGTGAATTTGGTTGG+AGG - chr5.1:3447627-3447646 MS.gene22342:CDS 50.0%
! AACTGTTATGGGCTGCTGCT+TGG - chr5.1:3448635-3448654 MS.gene22342:intron 50.0%
! GGCTGCTGCTTGGTTATACA+AGG - chr5.1:3448645-3448664 MS.gene22342:intron 50.0%
!! CATGTGGGTGCTATTGTTGG+AGG - chr5.1:3449572-3449591 MS.gene22342:intron 50.0%
!! TCATCAATGTTGGGAGCGTC+CGG - chr5.1:3448184-3448203 MS.gene22342:intron 50.0%
ACATGCCTGTGTGAAGAGCG+TGG + chr5.1:3447832-3447851 None:intergenic 55.0%
ACGCTGCCTGATTCCAACCT+TGG + chr5.1:3448711-3448730 None:intergenic 55.0%
CTCCCCTCCACTTCACTCTT+TGG + chr5.1:3446870-3446889 None:intergenic 55.0%
GGAGACTCAGCTCTCTCTGA+TGG - chr5.1:3446886-3446905 MS.gene22342:CDS 55.0%
TACCCCAACGAATAGCACGG+CGG + chr5.1:3447776-3447795 None:intergenic 55.0%
TCCAACCACGCTCTTCACAC+AGG - chr5.1:3447824-3447843 MS.gene22342:intron 55.0%
! ATCTCCGCCGTGCTATTCGT+TGG - chr5.1:3447769-3447788 MS.gene22342:intron 55.0%
! TCTCCGCCGTGCTATTCGTT+GGG - chr5.1:3447770-3447789 MS.gene22342:intron 55.0%
!! AGATTGAGAGAGGGGCACTG+AGG + chr5.1:3447509-3447528 None:intergenic 55.0%
!! AGGGCTTAAGAGGGGCATCA+TGG - chr5.1:3446657-3446676 MS.gene22342:CDS 55.0%
!! ATTGAGAGAGGGGCACTGAG+GGG + chr5.1:3447507-3447526 None:intergenic 55.0%
!! GATTGAGAGAGGGGCACTGA+GGG + chr5.1:3447508-3447527 None:intergenic 55.0%
!! GGCTTAAGAGGGGCATCATG+GGG - chr5.1:3446659-3446678 MS.gene22342:CDS 55.0%
!! GGGCTTAAGAGGGGCATCAT+GGG - chr5.1:3446658-3446677 MS.gene22342:CDS 55.0%
AGCTGCAGCCTCAGTTCCAG+GGG + chr5.1:3448255-3448274 None:intergenic 60.0%
AGGCAGCGTCTGAGTTCAGC+TGG - chr5.1:3448722-3448741 MS.gene22342:intron 60.0%
CAGCTGCAGCCTCAGTTCCA+GGG + chr5.1:3448256-3448275 None:intergenic 60.0%
GGCAGCGTCTGAGTTCAGCT+GGG - chr5.1:3448723-3448742 MS.gene22342:intron 60.0%
TCAGCTGCAGCCTCAGTTCC+AGG + chr5.1:3448257-3448276 None:intergenic 60.0%
TGGAACTGAGGCTGCAGCTG+AGG - chr5.1:3448256-3448275 MS.gene22342:intron 60.0%
! CTCCGCCGTGCTATTCGTTG+GGG - chr5.1:3447771-3447790 MS.gene22342:intron 60.0%
! GCCTGTGTGAAGAGCGTGGT+TGG + chr5.1:3447828-3447847 None:intergenic 60.0%
!! TTGGGAGCGTCCGGAAGACA+TGG - chr5.1:3448193-3448212 MS.gene22342:intron 60.0%
!! AGAGAGGGGCACTGAGGGGT+TGG + chr5.1:3447503-3447522 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 3446107 3449727 3446107 ID=MS.gene22342
chr5.1 mRNA 3446107 3449727 3446107 ID=MS.gene22342.t1;Parent=MS.gene22342
chr5.1 exon 3449703 3449727 3449703 ID=MS.gene22342.t1.exon1;Parent=MS.gene22342.t1
chr5.1 CDS 3449703 3449727 3449703 ID=cds.MS.gene22342.t1;Parent=MS.gene22342.t1
chr5.1 exon 3448913 3449028 3448913 ID=MS.gene22342.t1.exon2;Parent=MS.gene22342.t1
chr5.1 CDS 3448913 3449028 3448913 ID=cds.MS.gene22342.t1;Parent=MS.gene22342.t1
chr5.1 exon 3447989 3448201 3447989 ID=MS.gene22342.t1.exon3;Parent=MS.gene22342.t1
chr5.1 CDS 3447989 3448201 3447989 ID=cds.MS.gene22342.t1;Parent=MS.gene22342.t1
chr5.1 exon 3447470 3447670 3447470 ID=MS.gene22342.t1.exon4;Parent=MS.gene22342.t1
chr5.1 CDS 3447470 3447670 3447470 ID=cds.MS.gene22342.t1;Parent=MS.gene22342.t1
chr5.1 exon 3447309 3447386 3447309 ID=MS.gene22342.t1.exon5;Parent=MS.gene22342.t1
chr5.1 CDS 3447309 3447386 3447309 ID=cds.MS.gene22342.t1;Parent=MS.gene22342.t1
chr5.1 exon 3447051 3447203 3447051 ID=MS.gene22342.t1.exon6;Parent=MS.gene22342.t1
chr5.1 CDS 3447051 3447203 3447051 ID=cds.MS.gene22342.t1;Parent=MS.gene22342.t1
chr5.1 exon 3446821 3446929 3446821 ID=MS.gene22342.t1.exon7;Parent=MS.gene22342.t1
chr5.1 CDS 3446821 3446929 3446821 ID=cds.MS.gene22342.t1;Parent=MS.gene22342.t1
chr5.1 exon 3446550 3446716 3446550 ID=MS.gene22342.t1.exon8;Parent=MS.gene22342.t1
chr5.1 CDS 3446550 3446716 3446550 ID=cds.MS.gene22342.t1;Parent=MS.gene22342.t1
chr5.1 exon 3446107 3446448 3446107 ID=MS.gene22342.t1.exon9;Parent=MS.gene22342.t1
chr5.1 CDS 3446107 3446448 3446107 ID=cds.MS.gene22342.t1;Parent=MS.gene22342.t1
Gene Sequence

>MS.gene22342

ATGGCACAATGGTTGCTAGTATATGGTCAATCTCCATAGCTGTCATTTTTTGTTTCCCAATTATATTATAGTTTATTATTAAAATGCGATAAGAAGATGACATATGGGGCAAAAGGAAGCGATATTAGCACTAAAAATTTGTTCGTTCAATTAAATGTTAACACTTATTATTAATATGGCATCAGCTAACATATTATAGTAGTCGGCAAGCATCTCTAACACGTAAACTCCTCTAGAAAAAAAACACGTAAACTATATGAAGTTAAAGGGAGTATTAATAATGTCTTCATGATTAATGGATATGTCATCTTCATGACTCGTTTATTCCGACTTTAATTGTTAAATATGCATATAGTGCCATAATGACTAGTACACGTAAAGTTCTCTCCCATTCCACACAATTCATAAATCTTTCTTATACATATCTACTTTTGTAAATTCCTATCATATTGGAATTGATACTTAAGTAGAGGTGGTTAGGAAACGTCTATAGTTTCTCCCCTTATAAATACAAGCATGTTTAGCTGAATATATATCAAGTAGAGTACTTAGGGCTTAAGAGGGGCATCATGGGGTTCTATTTGTTGATAAGTGGTTTGATCTTGTGGTTTGCCATGAGTAGTAAGAATAATGGTCTATTAGCCATAATGGATGAGGATTTAATTAGTAAAAGTTCCTCATCTAGTTACAACTATGCAGATGCTCTTGGCAAAGCCATCTTGTTTTTTGAAGGACAACGCTCAGGGAAATTGCCTAAAGACCAAAGAGTGAAGTGGAGGGGAGACTCAGCTCTCTCTGATGGCAAAACTCAAAATGTACATATACAAGTGACGTGACATTATTTATAAAAAAAGAAAAGTGACGTAAGATACAATTTAATTTACAATTTTTTTATCTATCTATTATTATAGTGAGATTAGAATATGGGATTAATTGAGTTAAGTTTTTAATGCATGAGGGGCACAATATGACTATATAAAAAGCAATATATATGTGTATTATTAATTACTGAATTTATTCATGTGTGACTTTAGAAGTAGTGATCAAGAAATCTATCAAAAGGGGGATTATTTTATTTTTTTTACAAGAATAAAACTACAACTATTAATTTTTACAAAAAAGTTATATAATATATGATTGAAATTAATTTTCATACACTATCAACAAACCAAAACCACTCATATGTGTAACTATAGAAATTTATAGCTAAAATAAAATGTTTTTAATAATTTGATGGTCATATGATTGATTTGCAGTCTAAAAAATATTTATACTAACATTGTATATAATATTTTGTTTGACCAAACATTGTATATAAATTAAACTTCATAATTGTATATAATAGTCTTCAACTATATATGTGCTTGAATGTTATTGCATGAGAGGGAGGTGTCCAACCCCTCAGTGCCCCTCTCTCAATCTGCCATGATTATGACTAATTAAAGTAAAAAAAATATTATGATCGGAAAATAAATCCTTAATTACTTTACCTATGACTGATCATGTGTATTATATATCTTTGGCAGGTGAATTTGGTTGGAGGATACTATGATGCTGGTGATAATGTCAAGTTTGGATGGCCAATGTCATTTACAGTCAGCTTATTGAGTTGGGCTGCTGTTGAATATGAAAGTGAGATTTCTTCAGTTAACCAGATTGATTATCTCCGCCGTGCTATTCGTTGGGGTACAAATTTCATACTTCAATCTCACACTTCTCCAACCACGCTCTTCACACAGGCATGTTTCTATGGCCCTTTACGGATAAATAACTTAATTCACAACTTATAAGCTATTTTCACAAGCTATCTTGGAGAGTCTATGAAAATAAGCCGAAAACAGCTTATGAACATGTCATAAGTTTTTTTTCCAAAAGTTATTAACAGTCTCTCAGTGCTTATGTTAGCAGAGAAGCTCAAATAAGTCAGTCCAAACTTACCCTATATATCATGACAAAGTACTTATCAGTGAATGAAACATGTAGATGTGTGTACATATGCCTTGTGTTGCAGGTTAAATATTTGGTTTGTAATTAATAAGAATTGTTGTGATTGCTAGGTTGGAGAAGGAAACGCAGATCATCAATGTTGGGAGCGTCCGGAAGACATGGATACTCCAAGAACACTTTACAAGATTGATGCTAATTCCCCTGGAACTGAGGCTGCAGCTGAGGCTGCTGCTGCACTTTCAGCTGCTTCAATTGTCTTTAAGAAAAAAGACACTCAATATTCGTCGAAGTTGTTAAGACATTCAAAATCTGTGAGCAATTCAAGTATCATATAGTTTATTAATTCATCAATTAGTTTAACAAACATTTAATAGTAATAACATATGTTTTGTAGTTGTTTGATTTTGCTGACAAGTATAGAGGCACCTACACGGGTTCTTGTCCATTCTACTGCTCGTACTCTGGTTACCAAGTAAGAAATTGCAGCTTGTGGAAAAGAGAATATTTACAAACTAATAATTTCCTAGTATCATTCTCATTCATTTATGGTTGTGATTTTTGAATTGTGTACCGAAAGGATGAACTGTTATGGGCTGCTGCTTGGTTATACAAGGCCAGTGGAGAAAGCAAGTACTTGAAGTACATCACAGATAACCAAGGTTGGAATCAGGCAGCGTCTGAGTTCAGCTGGGACAACAAATTTGTTGGAGTTCAAACATTACTAACACAGGTCTTTATATTTAATGACGTTAACTATACCATATAGTAACAATCTGATATATTTTTAGTAAACATTAGTTCCAAGAAAGAATTAACTCATTAACGTTACTTTTTTTTTTTTTTTTTACTAGGAATTCTATGGTGGGAAGAAGGACTTAGCCAAGATTCATAGTGATGGTGAATCATTTATATGTGCATTGATGCCAGGAAGTTACTCTCTACAGATCAAAACAACTCCTGGTAACACTACAAATATAATATAAATAGTCTATCTTATTTCAATCAACATTAATTCATTATTGATGAAATGAGCTGAATTAGTATTTGCTATATTGTTAACTCAGGTGGACTTTTGTATACTAGAGATAGTAGTAATTTGCAATACACCACAACCTCAACCATGGTACTATTCATTTTCTCCAAAATCCTAAATAAAAATCATATTGATGGAATCCATTGTGGCTCTACCAATTTCACATCCTCTGAAATCAGAGCCTTTGCAAAATCACAGGTATTTGCACACTAATTTAATTGACTCTAAGACATTAAGCCCATTTCTTTATTTTGCTTCATAATTATTATAACTAAAAATTGAATGCGTACATAACATAGGTGGACTACATACTAGGTAACAATCCCATGAAGATGTCATACATGGTGGGATATGGAAGTAAATATCCAAAGCAATTACATCACAGAGGTTCTTCCATTCCTTCAATCAAAGTTCACCCAGCTAAAGTGGATTGCAATGATGGTTACACAGATTATTTCTATTCCTCTAATCCTAATCCTAATATTCATGTGGGTGCTATTGTTGGAGGACCTGATTTTAATGACCAATTTAATGATGCAAGATCTGATTACTCTAATTCTGAACCTACCACTTATATGAATGCTGCGTTCATAGGTTCTGTTGCAGCTTTGATTGCCGAAATTAAAACCGGGACTATGTAG
Protein sequence

>MS.gene22342.t1

MAQWLLVYDALGKAILFFEGQRSGKLPKDQRVKWRGDSALSDGKTQNVNLVGGYYDAGDNVKFGWPMSFTVSLLSWAAVEYESEISSVNQIDYLRRAIRWGTNFILQSHTSPTTLFTQVGEGNADHQCWERPEDMDTPRTLYKIDANSPGTEAAAEAAAALSAASIVFKKKDTQYSSKLLRHSKSLFDFADKYRGTYTGSCPFYCSYSGYQDELLWAAAWLYKASGESKYLKYITDNQGWNQAASEFSWDNKFVGVQTLLTQEFYGGKKDLAKIHSDGESFICALMPGSYSLQIKTTPGGLLYTRDSSNLQYTTTSTMVLFIFSKILNKNHIDGIHCGSTNFTSSEIRAFAKSQVDYILGNNPMKMSYMVGYGSKYPKQLHHRGSSIPSIKVHPAKVDCNDGYTDYFYSSNPNPNIHVGAIVGGPDFNDQFNDARSDYSNSEPTTYMNAAFIGSVAALIAEIKTGTM