Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024647.t1 | XP_003611061.1 | 94 | 485 | 28 | 1 | 1 | 484 | 16 | 500 | 2.40E-264 | 921.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024647.t1 | P22503 | 81.6 | 474 | 86 | 1 | 5 | 477 | 20 | 493 | 9.6e-230 | 797.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024647.t1 | G7KC03 | 94.0 | 485 | 28 | 1 | 1 | 484 | 16 | 500 | 1.7e-264 | 921.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024647.t1 | MTR_5g010000 | 94.021 | 485 | 28 | 1 | 1 | 484 | 16 | 500 | 0.0 | 895 |
MS.gene024647.t1 | MTR_5g009970 | 85.263 | 475 | 69 | 1 | 5 | 478 | 21 | 495 | 0.0 | 819 |
MS.gene024647.t1 | MTR_5g009970 | 85.714 | 413 | 58 | 1 | 67 | 478 | 9 | 421 | 0.0 | 716 |
MS.gene024647.t1 | MTR_5g009970 | 85.279 | 394 | 57 | 1 | 86 | 478 | 1 | 394 | 0.0 | 677 |
MS.gene024647.t1 | MTR_5g009970 | 85.276 | 326 | 47 | 1 | 154 | 478 | 1 | 326 | 0.0 | 550 |
MS.gene024647.t1 | MTR_3g080810 | 54.095 | 464 | 200 | 6 | 25 | 478 | 35 | 495 | 1.42e-175 | 509 |
MS.gene024647.t1 | MTR_3g117500 | 50.529 | 473 | 221 | 5 | 16 | 477 | 15 | 485 | 3.99e-164 | 479 |
MS.gene024647.t1 | MTR_8g104820 | 49.679 | 467 | 218 | 8 | 21 | 474 | 26 | 488 | 6.71e-161 | 471 |
MS.gene024647.t1 | MTR_5g085730 | 48.643 | 479 | 226 | 7 | 16 | 477 | 22 | 497 | 3.93e-160 | 471 |
MS.gene024647.t1 | MTR_3g080190 | 48.734 | 474 | 223 | 7 | 21 | 477 | 36 | 506 | 2.94e-156 | 461 |
MS.gene024647.t1 | MTR_3g105230 | 48.315 | 445 | 226 | 4 | 23 | 466 | 28 | 469 | 8.04e-156 | 458 |
MS.gene024647.t1 | MTR_3g010330 | 49.573 | 468 | 224 | 7 | 19 | 478 | 19 | 482 | 5.90e-155 | 456 |
MS.gene024647.t1 | MTR_5g093590 | 49.149 | 470 | 220 | 8 | 24 | 476 | 33 | 500 | 4.17e-154 | 454 |
MS.gene024647.t1 | MTR_3g023740 | 49.119 | 454 | 227 | 4 | 24 | 476 | 29 | 479 | 4.38e-154 | 454 |
MS.gene024647.t1 | MTR_1g088190 | 49.353 | 464 | 205 | 6 | 22 | 476 | 36 | 478 | 5.26e-152 | 449 |
MS.gene024647.t1 | MTR_4g035955 | 48.172 | 465 | 232 | 4 | 15 | 474 | 4 | 464 | 1.04e-151 | 447 |
MS.gene024647.t1 | MTR_8g099410 | 48.421 | 475 | 225 | 7 | 21 | 479 | 24 | 494 | 2.52e-151 | 448 |
MS.gene024647.t1 | MTR_8g099410 | 48.421 | 475 | 225 | 7 | 21 | 479 | 24 | 494 | 7.79e-150 | 448 |
MS.gene024647.t1 | MTR_4g074960 | 46.906 | 501 | 235 | 10 | 24 | 497 | 27 | 523 | 1.60e-149 | 447 |
MS.gene024647.t1 | MTR_4g035930 | 47.692 | 455 | 229 | 4 | 25 | 474 | 15 | 465 | 1.78e-149 | 441 |
MS.gene024647.t1 | MTR_4g035975 | 46.996 | 466 | 228 | 7 | 24 | 474 | 26 | 487 | 1.92e-145 | 432 |
MS.gene024647.t1 | MTR_1g037340 | 48.478 | 460 | 226 | 6 | 25 | 476 | 25 | 481 | 4.90e-143 | 426 |
MS.gene024647.t1 | MTR_3g113720 | 43.277 | 476 | 250 | 6 | 26 | 486 | 58 | 528 | 5.75e-131 | 396 |
MS.gene024647.t1 | MTR_5g010010 | 99.451 | 182 | 1 | 0 | 478 | 659 | 52 | 233 | 1.73e-128 | 379 |
MS.gene024647.t1 | MTR_8g075990 | 45.085 | 468 | 237 | 6 | 26 | 478 | 64 | 526 | 7.25e-128 | 388 |
MS.gene024647.t1 | MTR_2g028480 | 39.921 | 506 | 253 | 13 | 25 | 493 | 111 | 602 | 9.09e-101 | 321 |
MS.gene024647.t1 | MTR_3g090540 | 38.037 | 489 | 254 | 15 | 25 | 476 | 107 | 583 | 9.48e-99 | 315 |
MS.gene024647.t1 | MTR_3g082440 | 37.251 | 502 | 269 | 14 | 25 | 493 | 116 | 604 | 6.73e-92 | 298 |
MS.gene024647.t1 | MTR_1g088190 | 48.693 | 306 | 128 | 5 | 22 | 318 | 36 | 321 | 1.34e-85 | 272 |
MS.gene024647.t1 | MTR_7g108925 | 47.771 | 157 | 81 | 1 | 320 | 476 | 43 | 198 | 6.32e-49 | 171 |
MS.gene024647.t1 | MTR_0393s0050 | 48.966 | 145 | 72 | 2 | 320 | 463 | 20 | 163 | 2.37e-40 | 146 |
MS.gene024647.t1 | MTR_1g037320 | 48.447 | 161 | 78 | 2 | 86 | 242 | 1 | 160 | 1.43e-39 | 147 |
MS.gene024647.t1 | MTR_1g037320 | 52.459 | 122 | 56 | 2 | 354 | 474 | 169 | 289 | 8.07e-33 | 128 |
MS.gene024647.t1 | MTR_4g128810 | 38.095 | 168 | 101 | 1 | 329 | 496 | 189 | 353 | 3.00e-32 | 129 |
MS.gene024647.t1 | MTR_7g053480 | 75.000 | 44 | 11 | 0 | 479 | 522 | 53 | 96 | 3.01e-14 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024647.t1 | AT4G23560 | 69.583 | 480 | 144 | 1 | 1 | 480 | 1 | 478 | 0.0 | 679 |
MS.gene024647.t1 | AT4G09740 | 68.333 | 480 | 150 | 1 | 1 | 480 | 1 | 478 | 0.0 | 669 |
MS.gene024647.t1 | AT1G02800 | 54.644 | 463 | 196 | 6 | 23 | 476 | 41 | 498 | 6.77e-175 | 508 |
MS.gene024647.t1 | AT4G02290 | 51.732 | 462 | 211 | 5 | 22 | 474 | 49 | 507 | 6.70e-168 | 490 |
MS.gene024647.t1 | AT1G23210 | 51.178 | 467 | 214 | 6 | 15 | 471 | 18 | 480 | 2.98e-167 | 488 |
MS.gene024647.t1 | AT1G70710 | 51.522 | 460 | 211 | 5 | 21 | 471 | 24 | 480 | 1.51e-166 | 486 |
MS.gene024647.t1 | AT4G39010 | 50.417 | 480 | 222 | 7 | 18 | 485 | 22 | 497 | 4.69e-165 | 482 |
MS.gene024647.t1 | AT1G71380 | 49.684 | 475 | 228 | 6 | 7 | 474 | 6 | 476 | 2.28e-155 | 457 |
MS.gene024647.t1 | AT3G43860 | 49.561 | 456 | 226 | 4 | 25 | 479 | 34 | 486 | 1.80e-153 | 452 |
MS.gene024647.t1 | AT3G43860 | 49.561 | 456 | 226 | 4 | 25 | 479 | 34 | 486 | 1.80e-153 | 452 |
MS.gene024647.t1 | AT2G32990 | 47.210 | 466 | 230 | 7 | 24 | 474 | 38 | 502 | 5.11e-152 | 450 |
MS.gene024647.t1 | AT1G22880 | 49.469 | 471 | 227 | 6 | 19 | 482 | 18 | 484 | 7.95e-152 | 448 |
MS.gene024647.t1 | AT4G11050 | 45.968 | 496 | 245 | 8 | 22 | 501 | 23 | 511 | 2.00e-149 | 444 |
MS.gene024647.t1 | AT4G11050 | 45.968 | 496 | 245 | 8 | 22 | 501 | 23 | 511 | 4.28e-148 | 444 |
MS.gene024647.t1 | AT4G11050 | 45.968 | 496 | 245 | 8 | 22 | 501 | 23 | 511 | 4.51e-148 | 444 |
MS.gene024647.t1 | AT1G64390 | 44.800 | 500 | 252 | 9 | 22 | 504 | 22 | 514 | 1.11e-145 | 437 |
MS.gene024647.t1 | AT4G39000 | 47.097 | 465 | 228 | 7 | 24 | 474 | 24 | 484 | 2.10e-145 | 432 |
MS.gene024647.t1 | AT2G44570 | 48.069 | 466 | 229 | 7 | 21 | 476 | 29 | 491 | 5.93e-144 | 428 |
MS.gene024647.t1 | AT1G48930 | 50.108 | 465 | 216 | 6 | 24 | 474 | 29 | 491 | 1.06e-143 | 432 |
MS.gene024647.t1 | AT4G38990 | 46.285 | 471 | 236 | 6 | 20 | 474 | 18 | 487 | 1.62e-143 | 427 |
MS.gene024647.t1 | AT2G44540 | 47.835 | 462 | 229 | 6 | 25 | 477 | 33 | 491 | 5.03e-142 | 423 |
MS.gene024647.t1 | AT2G44560 | 48.373 | 461 | 226 | 6 | 25 | 476 | 33 | 490 | 8.91e-141 | 420 |
MS.gene024647.t1 | AT2G44550 | 46.331 | 477 | 235 | 9 | 11 | 477 | 25 | 490 | 5.10e-138 | 413 |
MS.gene024647.t1 | AT1G19940 | 46.070 | 458 | 231 | 5 | 25 | 471 | 48 | 500 | 4.32e-134 | 404 |
MS.gene024647.t1 | AT1G19940 | 46.070 | 458 | 231 | 5 | 25 | 471 | 48 | 500 | 4.32e-134 | 404 |
MS.gene024647.t1 | AT4G02290 | 48.744 | 398 | 192 | 5 | 86 | 474 | 1 | 395 | 2.19e-131 | 393 |
MS.gene024647.t1 | AT1G75680 | 47.033 | 455 | 221 | 7 | 26 | 467 | 58 | 505 | 4.06e-131 | 396 |
MS.gene024647.t1 | AT1G22880 | 47.772 | 404 | 200 | 6 | 86 | 482 | 1 | 400 | 3.25e-123 | 372 |
MS.gene024647.t1 | AT4G39010 | 47.554 | 368 | 179 | 6 | 18 | 373 | 22 | 387 | 7.28e-116 | 352 |
MS.gene024647.t1 | AT1G63970 | 83.237 | 173 | 29 | 0 | 487 | 659 | 59 | 231 | 6.65e-101 | 308 |
MS.gene024647.t1 | AT2G44570 | 44.709 | 378 | 197 | 6 | 21 | 389 | 29 | 403 | 2.75e-100 | 313 |
MS.gene024647.t1 | AT5G49720 | 39.406 | 505 | 259 | 13 | 25 | 493 | 108 | 601 | 1.55e-97 | 312 |
MS.gene024647.t1 | AT1G19940 | 44.321 | 361 | 189 | 4 | 25 | 374 | 48 | 407 | 9.26e-95 | 299 |
MS.gene024647.t1 | AT4G24260 | 38.835 | 515 | 264 | 15 | 25 | 501 | 108 | 609 | 3.93e-92 | 298 |
MS.gene024647.t1 | AT1G65610 | 35.586 | 503 | 275 | 15 | 25 | 493 | 116 | 603 | 2.29e-90 | 293 |
MS.gene024647.t1 | AT1G22880 | 49.515 | 309 | 146 | 5 | 19 | 320 | 18 | 323 | 2.97e-89 | 281 |
MS.gene024647.t1 | AT4G38990 | 42.442 | 344 | 174 | 5 | 20 | 358 | 18 | 342 | 3.15e-82 | 263 |
MS.gene024647.t1 | AT1G63970 | 81.818 | 99 | 18 | 0 | 487 | 585 | 59 | 157 | 2.06e-55 | 186 |
MS.gene024647.t1 | AT4G24260 | 36.951 | 387 | 201 | 12 | 25 | 374 | 108 | 488 | 2.79e-55 | 196 |
MS.gene024647.t1 | AT4G24260 | 42.657 | 286 | 131 | 9 | 25 | 281 | 108 | 389 | 3.08e-51 | 184 |
MS.gene024647.t1 | AT3G42153 | 58.696 | 92 | 34 | 1 | 231 | 318 | 16 | 107 | 7.08e-30 | 114 |
Find 156 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTGGTTATCCTTTAATTAT+TGG | 0.154047 | 5.1:+3508643 | MS.gene024647:CDS |
CTCCCCTCCACTTCACTCTT+TGG | 0.212758 | 5.1:-3504581 | None:intergenic |
TGTTATTTGTCATGGGTAAA+TGG | 0.220078 | 5.1:+3504427 | None:intergenic |
TTAATTCCACCAATAATTAA+AGG | 0.221109 | 5.1:-3508652 | None:intergenic |
ATGTCATACATGGTGGGATA+TGG | 0.230083 | 5.1:+3506522 | MS.gene024647:CDS |
ATGAAAAGGATGAACTATTA+TGG | 0.237262 | 5.1:+3505723 | MS.gene024647:intron |
CCAGAGTACGAGCAGTAAAA+TGG | 0.238707 | 5.1:-3505598 | None:intergenic |
AACTATTATGGGCTGCTTCT+TGG | 0.270350 | 5.1:+3505735 | MS.gene024647:CDS |
AATGAATTCATCATCCATTA+TGG | 0.281543 | 5.1:-3504463 | None:intergenic |
TCAGCTGCAGCCTCAGTTCC+AGG | 0.287596 | 5.1:-3505208 | None:intergenic |
TTGTATTGGTCATTAGAATT+TGG | 0.289530 | 5.1:-3506696 | None:intergenic |
CCCACATGAATATTAGGATT+TGG | 0.290939 | 5.1:-3506657 | None:intergenic |
CTGCTCGTACTCTGGTTATC+AGG | 0.293044 | 5.1:+3505606 | MS.gene024647:CDS |
TCAATCTTGTAAGTTGTTCT+TGG | 0.295072 | 5.1:-3505175 | None:intergenic |
CGCTTCTGTGGTAAATATAA+AGG | 0.303097 | 5.1:+3511753 | MS.gene024647:CDS |
CCTCTGTGATGTAATTGTTT+TGG | 0.305598 | 5.1:-3506555 | None:intergenic |
CTTGGTGTATCCATGTCTTC+TGG | 0.334811 | 5.1:-3505157 | None:intergenic |
ACATAGGTGGACTACATATT+AGG | 0.343969 | 5.1:+3506483 | MS.gene024647:intron |
ATCTGTAGAGAGCTACTTCC+TGG | 0.344038 | 5.1:-3506085 | None:intergenic |
ATAGCACCCACATGAATATT+AGG | 0.348295 | 5.1:-3506663 | None:intergenic |
CATGAGGCAGGTTATGATAT+TGG | 0.350566 | 5.1:+3511637 | MS.gene024647:CDS |
GTGTCATTGGCAGGTGGATT+TGG | 0.356090 | 5.1:+3504769 | MS.gene024647:intron |
CATTGGCAGGTGGATTTGGT+TGG | 0.371328 | 5.1:+3504773 | MS.gene024647:intron |
TCTTCGCAGTGCTATTCGTT+GGG | 0.375871 | 5.1:+3504919 | MS.gene024647:CDS |
GCTTTAGGTCTTCCTGATAT+AGG | 0.382227 | 5.1:+3509672 | MS.gene024647:CDS |
AGCTGGGATAACAAATTTGT+TGG | 0.384877 | 5.1:+3505839 | MS.gene024647:CDS |
TCCTTGTGTGGGCTTAGTTT+CGG | 0.392429 | 5.1:-3511691 | None:intergenic |
CAGATCTTGCATCATTGTAT+TGG | 0.398459 | 5.1:-3506710 | None:intergenic |
TTGAAGGAGTAGCTGAGATT+GGG | 0.399469 | 5.1:-3508570 | None:intergenic |
GAATGGATTATTAGCCATAA+TGG | 0.408259 | 5.1:+3504449 | MS.gene024647:CDS |
GGTTCTGTTGCAGCTTTGCT+TGG | 0.409254 | 5.1:+3506780 | MS.gene024647:CDS |
TTTGAAGGAGTAGCTGAGAT+TGG | 0.416166 | 5.1:-3508571 | None:intergenic |
CACCATGTATGACATCTTCA+TGG | 0.417078 | 5.1:-3506514 | None:intergenic |
TCATTGCACCCCACTTTGGC+AGG | 0.417272 | 5.1:-3506606 | None:intergenic |
TTCACCATCAGTCTTAATCT+TGG | 0.417439 | 5.1:-3506041 | None:intergenic |
GTCGATTTCAATTGAGGTTG+TGG | 0.427587 | 5.1:-3508542 | None:intergenic |
ATCTTCGCAGTGCTATTCGT+TGG | 0.429802 | 5.1:+3504918 | MS.gene024647:CDS |
CACTTCACTCTTTGGTCCTT+AGG | 0.430996 | 5.1:-3504573 | None:intergenic |
GGATTTGTCGATTTCAATTG+AGG | 0.442600 | 5.1:-3508548 | None:intergenic |
TGGCAGGTGGATTTGGTTGG+AGG | 0.444755 | 5.1:+3504776 | MS.gene024647:intron |
GTGGAAGGGTTGTGATTCTT+CGG | 0.447373 | 5.1:+3509722 | MS.gene024647:CDS |
TGAAAAGGATGAACTATTAT+GGG | 0.456313 | 5.1:+3505724 | MS.gene024647:intron |
TGGAACTGAGGCTGCAGCTG+AGG | 0.459683 | 5.1:+3505210 | MS.gene024647:CDS |
GGTTATCCTTTAATTATTGG+TGG | 0.460157 | 5.1:+3508646 | MS.gene024647:CDS |
AGAATATACTCACAGATTCA+TGG | 0.463953 | 5.1:-3509752 | None:intergenic |
ATTCATGTGGGTGCTATTGT+TGG | 0.466637 | 5.1:+3506669 | MS.gene024647:CDS |
AAGCAGTGTCTGAATTCAGC+TGG | 0.468104 | 5.1:+3505822 | MS.gene024647:CDS |
CATGAAAAGGTTGATAGCCT+TGG | 0.468863 | 5.1:+3511784 | MS.gene024647:CDS |
GAAACGCAGATCATAATTGT+TGG | 0.470658 | 5.1:+3505128 | MS.gene024647:CDS |
TAGATGAAGAGAAATAGTTC+TGG | 0.473162 | 5.1:-3506632 | None:intergenic |
TTTGTCATGGGTAAATGGAA+TGG | 0.474409 | 5.1:+3504432 | None:intergenic |
CCCACACAAGGATGCTATCA+AGG | 0.475088 | 5.1:+3511702 | MS.gene024647:CDS |
GCGGGTGATAATGTGAAGTT+TGG | 0.476392 | 5.1:+3504809 | MS.gene024647:CDS |
TCGATTTCAATTGAGGTTGT+GGG | 0.478553 | 5.1:-3508541 | None:intergenic |
GCCATCATTGCACCCCACTT+TGG | 0.479110 | 5.1:-3506610 | None:intergenic |
TTGAGATATGATTGAAGGGA+TGG | 0.481296 | 5.1:-3506583 | None:intergenic |
TTACGGTGAGCTTGTTGAGT+TGG | 0.481846 | 5.1:+3504846 | MS.gene024647:CDS |
GCCAAAGTGGGGTGCAATGA+TGG | 0.482616 | 5.1:+3506609 | MS.gene024647:CDS |
GCAGGTTGAGATATGATTGA+AGG | 0.483094 | 5.1:-3506588 | None:intergenic |
AAACCATGGCCAACCCGAAA+AGG | 0.483370 | 5.1:-3508601 | None:intergenic |
TGCAAAGGCTCTAATTTCAG+AGG | 0.483766 | 5.1:-3506376 | None:intergenic |
GCCTTGATAGCATCCTTGTG+TGG | 0.485497 | 5.1:-3511703 | None:intergenic |
TCCAAGCAGTGCAGATAAGT+TGG | 0.486196 | 5.1:-3511725 | None:intergenic |
TGTCATACATGGTGGGATAT+GGG | 0.486645 | 5.1:+3506523 | MS.gene024647:CDS |
TAGCACCATGGTTGAGGTTG+TGG | 0.489282 | 5.1:-3506283 | None:intergenic |
CAGAGTACGAGCAGTAAAAT+GGG | 0.494790 | 5.1:-3505597 | None:intergenic |
TTCCACTTAGGATCAGAATC+AGG | 0.496430 | 5.1:-3509705 | None:intergenic |
ATATGAAAGTGAGATTTCTT+CGG | 0.496777 | 5.1:+3504880 | MS.gene024647:CDS |
GACCTTCATCGATTGGAACC+TGG | 0.499572 | 5.1:+3508625 | MS.gene024647:CDS |
AAGATTGATTCGAATTCCCC+TGG | 0.503739 | 5.1:+3505190 | MS.gene024647:CDS |
ACACTGCTTGACTCCAACCT+TGG | 0.505167 | 5.1:-3505808 | None:intergenic |
CCTTGATAGCATCCTTGTGT+GGG | 0.507271 | 5.1:-3511702 | None:intergenic |
CGAAAAGGAAGAACCTTTGA+AGG | 0.510185 | 5.1:-3508586 | None:intergenic |
GGAATTCTATGGCGGGAAGA+AGG | 0.510525 | 5.1:+3506012 | MS.gene024647:intron |
ATTAATATACCTCATGATAG+AGG | 0.512773 | 5.1:+3508670 | MS.gene024647:CDS |
GCCAACTTATCTGCACTGCT+TGG | 0.513880 | 5.1:+3511724 | MS.gene024647:CDS |
TTTATATGTGCATTGATGCC+AGG | 0.514115 | 5.1:+3506067 | MS.gene024647:CDS |
AACAAAAGCAGCATTCGAAT+AGG | 0.514537 | 5.1:-3506757 | None:intergenic |
GTGATAATGTGAAGTTTGGT+TGG | 0.518804 | 5.1:+3504813 | MS.gene024647:CDS |
AATGAATAGCACCATGGTTG+AGG | 0.521095 | 5.1:-3506289 | None:intergenic |
CAGCTGCAGCCTCAGTTCCA+GGG | 0.523289 | 5.1:-3505207 | None:intergenic |
GGCTGCTTCTTGGCTATACA+AGG | 0.523550 | 5.1:+3505745 | MS.gene024647:CDS |
AAACGCAGATCATAATTGTT+GGG | 0.523983 | 5.1:+3505129 | MS.gene024647:CDS |
CATGTGGGTGCTATTGTTGG+AGG | 0.529821 | 5.1:+3506672 | MS.gene024647:CDS |
CAAATATAGAGGTTCTTACT+CGG | 0.533103 | 5.1:+3505567 | MS.gene024647:CDS |
GTTGGAGGATACTACGACGC+GGG | 0.534176 | 5.1:+3504791 | MS.gene024647:CDS |
TTCCTGATTCTGATCCTAAG+TGG | 0.534340 | 5.1:+3509703 | MS.gene024647:CDS |
TAGAGCCTTTGCAAAATCAC+AGG | 0.537879 | 5.1:+3506386 | MS.gene024647:CDS |
CATATCTCAACCTGCCAAAG+TGG | 0.541021 | 5.1:+3506596 | MS.gene024647:CDS |
CTTGGCTATACAAGGCTAGT+GGG | 0.541408 | 5.1:+3505753 | MS.gene024647:CDS |
GTCAGACTTATGCATGAGGC+AGG | 0.542152 | 5.1:+3511625 | MS.gene024647:CDS |
ATATCTCAACCTGCCAAAGT+GGG | 0.542805 | 5.1:+3506597 | MS.gene024647:CDS |
GGAGACTCGGCTCTCTCTGA+TGG | 0.543154 | 5.1:+3504600 | MS.gene024647:CDS |
TCCAAATCCTAATATTCATG+TGG | 0.544345 | 5.1:+3506656 | MS.gene024647:CDS |
CCAATAATTAAAGGATAACC+AGG | 0.547141 | 5.1:-3508643 | None:intergenic |
TTCGAATTCCCCTGGAACTG+AGG | 0.548903 | 5.1:+3505198 | MS.gene024647:CDS |
CTTCGCAGTGCTATTCGTTG+GGG | 0.551133 | 5.1:+3504920 | MS.gene024647:CDS |
GAATCACAACCCTTCCACTT+AGG | 0.553850 | 5.1:-3509717 | None:intergenic |
TGATTCTGATCCTAAGTGGA+AGG | 0.553947 | 5.1:+3509707 | MS.gene024647:CDS |
AATCTCAGCTACTCCTTCAA+AGG | 0.560362 | 5.1:+3508573 | MS.gene024647:CDS |
CACTGCGAAGATAATCAAGC+TGG | 0.565610 | 5.1:-3504907 | None:intergenic |
AACCAGGTTCCAATCGATGA+AGG | 0.565616 | 5.1:-3508627 | None:intergenic |
AAATATAGAGGTTCTTACTC+GGG | 0.568349 | 5.1:+3505568 | MS.gene024647:CDS |
GCAAAGGCTCTAATTTCAGA+GGG | 0.569361 | 5.1:-3506375 | None:intergenic |
TGTGATTGCTAGGTGGGAGA+TGG | 0.571605 | 5.1:+3505106 | MS.gene024647:intron |
TTCTCAAGGAATTCTATGGC+GGG | 0.576719 | 5.1:+3506005 | MS.gene024647:intron |
AGTGAAGTGGAGGGGAGACT+CGG | 0.577463 | 5.1:+3504587 | MS.gene024647:CDS |
ACATCACAAGTAACCAAGGT+TGG | 0.578483 | 5.1:+3505795 | MS.gene024647:CDS |
TTTCTCAAGGAATTCTATGG+CGG | 0.583307 | 5.1:+3506004 | MS.gene024647:intron |
GACCAAAGAGTGAAGTGGAG+GGG | 0.583433 | 5.1:+3504579 | MS.gene024647:CDS |
TGAAGGAGTAGCTGAGATTG+GGG | 0.585122 | 5.1:-3508569 | None:intergenic |
TCTTGGCTATACAAGGCTAG+TGG | 0.585201 | 5.1:+3505752 | MS.gene024647:CDS |
AGCTGCAGCCTCAGTTCCAG+GGG | 0.585982 | 5.1:-3505206 | None:intergenic |
GGACCAAAGAGTGAAGTGGA+GGG | 0.589111 | 5.1:+3504578 | MS.gene024647:CDS |
TTGGGAGCGTCCAGAAGACA+TGG | 0.591746 | 5.1:+3505147 | MS.gene024647:CDS |
GGTTGCGAGGCTCATTCTGA+TGG | 0.591970 | 5.1:+3508691 | MS.gene024647:CDS |
ACCAACCACGCTCTTTACAC+AGG | 0.592498 | 5.1:+3504973 | MS.gene024647:CDS |
CTACAGATTAGAACAACTCC+AGG | 0.598543 | 5.1:+3506100 | MS.gene024647:CDS |
GCTTGGAGTTGACGCTTCTG+TGG | 0.600936 | 5.1:+3511741 | MS.gene024647:CDS |
CCAAATCCTAATATTCATGT+GGG | 0.601860 | 5.1:+3506657 | MS.gene024647:CDS |
CAGGTTGAGATATGATTGAA+GGG | 0.604313 | 5.1:-3506587 | None:intergenic |
ACCATGTATGACATCTTCAT+GGG | 0.604739 | 5.1:-3506513 | None:intergenic |
ACGCTCAGGGAAGTTGCCTA+AGG | 0.607352 | 5.1:+3504557 | MS.gene024647:CDS |
TCCCATGAAGATGTCATACA+TGG | 0.607679 | 5.1:+3506512 | MS.gene024647:CDS |
GGATGTTCTGCTTCACTGCG+TGG | 0.611052 | 5.1:+3509632 | MS.gene024647:CDS |
AAAAGCAGCATTCGAATAGG+TGG | 0.611197 | 5.1:-3506754 | None:intergenic |
AGCTCAAACATTACTAACAC+AGG | 0.615406 | 5.1:+3505862 | MS.gene024647:CDS |
ACCTCATGATAGAGGTTGCG+AGG | 0.621758 | 5.1:+3508678 | MS.gene024647:CDS |
ACCTGTGTAAAGAGCGTGGT+TGG | 0.623720 | 5.1:-3504974 | None:intergenic |
AATTGAAGCAGCAGAAAGAG+CGG | 0.625859 | 5.1:-3505239 | None:intergenic |
GCCGAAACTAAGCCCACACA+AGG | 0.626457 | 5.1:+3511690 | MS.gene024647:CDS |
ATGCAACATTGATACTTCAG+AGG | 0.627600 | 5.1:+3511668 | MS.gene024647:CDS |
TTAGCCAAGATTAAGACTGA+TGG | 0.628467 | 5.1:+3506037 | MS.gene024647:CDS |
AGCAGTGTCTGAATTCAGCT+GGG | 0.628902 | 5.1:+3505823 | MS.gene024647:CDS |
ATGAAGATGTCATACATGGT+GGG | 0.629064 | 5.1:+3506516 | MS.gene024647:CDS |
AGGACCAAAGAGTGAAGTGG+AGG | 0.629253 | 5.1:+3504577 | MS.gene024647:CDS |
GATTCTGATCCTAAGTGGAA+GGG | 0.630398 | 5.1:+3509708 | MS.gene024647:CDS |
ATCGATGAAGGTCAAAACCA+TGG | 0.631860 | 5.1:-3508615 | None:intergenic |
GCAGCATTCGAATAGGTGGT+AGG | 0.633283 | 5.1:-3506750 | None:intergenic |
AAAGGCTCTAATTTCAGAGG+GGG | 0.637646 | 5.1:-3506373 | None:intergenic |
TGCATAGTCATAATTAGCTG+AGG | 0.638379 | 5.1:-3504496 | None:intergenic |
TTGGCTATACAAGGCTAGTG+GGG | 0.646701 | 5.1:+3505754 | MS.gene024647:CDS |
GCCTCGCAACCTCTATCATG+AGG | 0.647110 | 5.1:-3508679 | None:intergenic |
CATGAAGATGTCATACATGG+TGG | 0.650028 | 5.1:+3506515 | MS.gene024647:CDS |
GGAGAAAATGAATAGCACCA+TGG | 0.650294 | 5.1:-3506295 | None:intergenic |
CTAAGGACCAAAGAGTGAAG+TGG | 0.660145 | 5.1:+3504574 | MS.gene024647:CDS |
TATCTCAACCTGCCAAAGTG+GGG | 0.664840 | 5.1:+3506598 | MS.gene024647:CDS |
AAGCTCACCGTAAAAGACAT+CGG | 0.669269 | 5.1:-3504836 | None:intergenic |
CATATTGATGGAATTCAGTG+TGG | 0.674538 | 5.1:+3506336 | MS.gene024647:CDS |
ATATACCACAACCTCAACCA+TGG | 0.675960 | 5.1:+3506278 | MS.gene024647:CDS |
TCACACCTGTGTAAAGAGCG+TGG | 0.687393 | 5.1:-3504978 | None:intergenic |
ACGTACATCACAAGTAACCA+AGG | 0.694288 | 5.1:+3505791 | MS.gene024647:CDS |
ACAGGTCAGACTTATGCATG+AGG | 0.696663 | 5.1:+3511621 | MS.gene024647:intron |
CAAAGGCTCTAATTTCAGAG+GGG | 0.704501 | 5.1:-3506374 | None:intergenic |
CCAAAACAATTACATCACAG+AGG | 0.744075 | 5.1:+3506555 | MS.gene024647:CDS |
GGTTGGAGGATACTACGACG+CGG | 0.797840 | 5.1:+3504790 | MS.gene024647:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 3504438 | 3511858 | 3504438 | ID=MS.gene024647 |
chr5.1 | mRNA | 3504438 | 3511858 | 3504438 | ID=MS.gene024647.t1;Parent=MS.gene024647 |
chr5.1 | exon | 3504438 | 3504635 | 3504438 | ID=MS.gene024647.t1.exon1;Parent=MS.gene024647.t1 |
chr5.1 | CDS | 3504438 | 3504635 | 3504438 | ID=cds.MS.gene024647.t1;Parent=MS.gene024647.t1 |
chr5.1 | exon | 3504782 | 3504994 | 3504782 | ID=MS.gene024647.t1.exon2;Parent=MS.gene024647.t1 |
chr5.1 | CDS | 3504782 | 3504994 | 3504782 | ID=cds.MS.gene024647.t1;Parent=MS.gene024647.t1 |
chr5.1 | exon | 3505118 | 3505318 | 3505118 | ID=MS.gene024647.t1.exon3;Parent=MS.gene024647.t1 |
chr5.1 | CDS | 3505118 | 3505318 | 3505118 | ID=cds.MS.gene024647.t1;Parent=MS.gene024647.t1 |
chr5.1 | exon | 3505550 | 3505627 | 3505550 | ID=MS.gene024647.t1.exon4;Parent=MS.gene024647.t1 |
chr5.1 | CDS | 3505550 | 3505627 | 3505550 | ID=cds.MS.gene024647.t1;Parent=MS.gene024647.t1 |
chr5.1 | exon | 3505731 | 3505883 | 3505731 | ID=MS.gene024647.t1.exon5;Parent=MS.gene024647.t1 |
chr5.1 | CDS | 3505731 | 3505883 | 3505731 | ID=cds.MS.gene024647.t1;Parent=MS.gene024647.t1 |
chr5.1 | exon | 3506013 | 3506121 | 3506013 | ID=MS.gene024647.t1.exon6;Parent=MS.gene024647.t1 |
chr5.1 | CDS | 3506013 | 3506121 | 3506013 | ID=cds.MS.gene024647.t1;Parent=MS.gene024647.t1 |
chr5.1 | exon | 3506241 | 3506407 | 3506241 | ID=MS.gene024647.t1.exon7;Parent=MS.gene024647.t1 |
chr5.1 | CDS | 3506241 | 3506407 | 3506241 | ID=cds.MS.gene024647.t1;Parent=MS.gene024647.t1 |
chr5.1 | exon | 3506489 | 3506801 | 3506489 | ID=MS.gene024647.t1.exon8;Parent=MS.gene024647.t1 |
chr5.1 | CDS | 3506489 | 3506801 | 3506489 | ID=cds.MS.gene024647.t1;Parent=MS.gene024647.t1 |
chr5.1 | exon | 3508530 | 3508712 | 3508530 | ID=MS.gene024647.t1.exon9;Parent=MS.gene024647.t1 |
chr5.1 | CDS | 3508530 | 3508712 | 3508530 | ID=cds.MS.gene024647.t1;Parent=MS.gene024647.t1 |
chr5.1 | exon | 3509631 | 3509761 | 3509631 | ID=MS.gene024647.t1.exon10;Parent=MS.gene024647.t1 |
chr5.1 | CDS | 3509631 | 3509761 | 3509631 | ID=cds.MS.gene024647.t1;Parent=MS.gene024647.t1 |
chr5.1 | exon | 3511625 | 3511858 | 3511625 | ID=MS.gene024647.t1.exon11;Parent=MS.gene024647.t1 |
chr5.1 | CDS | 3511625 | 3511858 | 3511625 | ID=cds.MS.gene024647.t1;Parent=MS.gene024647.t1 |
Gene Sequence |
Protein sequence |