AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene015691

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015691.t1 MTR_8g104820 98.583 494 7 0 1 494 1 494 0.0 1009
MS.gene015691.t1 MTR_3g117500 62.025 474 173 5 23 493 18 487 0.0 600
MS.gene015691.t1 MTR_4g035955 58.491 477 190 4 17 493 1 469 0.0 567
MS.gene015691.t1 MTR_4g035930 57.411 479 195 5 15 493 1 470 0.0 565
MS.gene015691.t1 MTR_3g080810 58.280 465 192 2 29 493 34 496 0.0 552
MS.gene015691.t1 MTR_4g035975 57.895 494 187 8 14 494 8 493 0.0 547
MS.gene015691.t1 MTR_1g088190 60.086 466 163 4 27 491 36 479 0.0 546
MS.gene015691.t1 MTR_3g010330 55.699 465 199 4 30 493 25 483 7.78e-180 513
MS.gene015691.t1 MTR_8g099410 50.105 475 224 8 26 492 24 493 3.52e-161 467
MS.gene015691.t1 MTR_8g099410 50.105 475 224 8 26 492 24 493 4.54e-160 468
MS.gene015691.t1 MTR_5g010000 50.214 468 215 9 26 488 36 490 1.16e-157 457
MS.gene015691.t1 MTR_3g080190 48.871 487 236 8 13 490 23 505 1.97e-157 457
MS.gene015691.t1 MTR_5g009970 48.101 474 228 9 20 488 31 491 6.16e-157 456
MS.gene015691.t1 MTR_5g085730 46.091 486 249 8 14 490 15 496 9.88e-152 443
MS.gene015691.t1 MTR_4g074960 50.000 470 221 9 28 488 26 490 3.15e-147 435
MS.gene015691.t1 MTR_5g093590 45.030 493 255 9 7 488 11 498 7.29e-144 422
MS.gene015691.t1 MTR_1g037340 48.871 487 226 10 14 491 10 482 3.19e-143 420
MS.gene015691.t1 MTR_3g105230 43.271 483 257 8 1 480 1 469 6.32e-140 411
MS.gene015691.t1 MTR_3g023740 46.104 462 232 9 30 488 30 477 1.17e-136 403
MS.gene015691.t1 MTR_5g009970 47.156 422 205 9 72 488 9 417 1.43e-134 396
MS.gene015691.t1 MTR_5g009970 45.658 403 201 9 91 488 1 390 7.06e-122 362
MS.gene015691.t1 MTR_3g113720 41.545 479 249 10 26 488 53 516 1.08e-112 343
MS.gene015691.t1 MTR_1g088190 57.929 309 108 3 27 334 36 323 5.30e-112 335
MS.gene015691.t1 MTR_8g075990 41.578 469 253 10 31 488 64 522 1.71e-108 333
MS.gene015691.t1 MTR_5g009970 46.988 332 164 6 159 488 1 322 2.71e-99 302
MS.gene015691.t1 MTR_2g028480 39.499 519 259 18 14 492 88 591 1.01e-89 286
MS.gene015691.t1 MTR_3g082440 38.604 487 256 17 30 487 116 588 1.79e-84 273
MS.gene015691.t1 MTR_3g090540 33.397 524 282 19 9 487 79 580 1.17e-79 259
MS.gene015691.t1 MTR_7g108925 62.658 158 58 1 334 491 43 199 6.13e-64 207
MS.gene015691.t1 MTR_0393s0050 55.862 145 62 2 334 477 20 163 1.66e-46 160
MS.gene015691.t1 MTR_1g037320 49.390 164 77 3 91 252 1 160 1.32e-35 134
MS.gene015691.t1 MTR_1g037320 51.613 124 57 2 366 488 168 289 1.66e-31 123
MS.gene015691.t1 MTR_4g128810 39.333 150 82 4 341 487 187 330 7.06e-24 103
MS.gene015691.t1 MTR_7g108920 41.935 93 53 1 240 332 86 177 1.69e-14 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015691.t1 AT1G70710 79.108 493 98 3 1 493 1 488 0.0 811
MS.gene015691.t1 AT1G23210 76.667 480 109 2 14 493 12 488 0.0 781
MS.gene015691.t1 AT4G02290 62.366 465 172 2 27 491 49 510 0.0 589
MS.gene015691.t1 AT4G39010 59.701 469 184 4 29 494 28 494 0.0 585
MS.gene015691.t1 AT1G02800 61.987 463 171 3 29 491 42 499 0.0 569
MS.gene015691.t1 AT4G39000 53.737 495 220 5 3 494 2 490 0.0 525
MS.gene015691.t1 AT1G22880 53.846 481 216 3 12 492 6 480 2.20e-180 514
MS.gene015691.t1 AT4G38990 54.806 489 208 8 15 494 9 493 4.27e-180 514
MS.gene015691.t1 AT1G71380 53.015 481 220 3 12 492 6 480 4.36e-178 509
MS.gene015691.t1 AT4G02290 59.850 401 158 2 91 491 1 398 2.63e-169 483
MS.gene015691.t1 AT1G64390 51.688 474 216 8 27 492 22 490 6.18e-162 473
MS.gene015691.t1 AT4G11050 50.851 470 218 8 27 488 23 487 1.23e-159 464
MS.gene015691.t1 AT4G11050 50.851 470 218 8 27 488 23 487 2.70e-159 466
MS.gene015691.t1 AT4G11050 50.851 470 218 8 27 488 23 487 3.51e-159 466
MS.gene015691.t1 AT4G09740 50.418 478 222 7 14 488 7 472 5.66e-158 457
MS.gene015691.t1 AT4G23560 50.209 478 222 8 14 488 8 472 7.04e-158 457
MS.gene015691.t1 AT4G39010 58.127 363 148 3 29 388 28 389 3.61e-154 444
MS.gene015691.t1 AT2G32990 46.881 497 237 10 13 488 12 502 1.27e-149 438
MS.gene015691.t1 AT1G22880 52.488 402 185 3 91 492 1 396 7.41e-147 426
MS.gene015691.t1 AT2G44550 47.119 486 240 10 10 489 14 488 3.44e-138 407
MS.gene015691.t1 AT3G43860 46.352 466 233 8 30 492 34 485 2.06e-136 403
MS.gene015691.t1 AT3G43860 46.352 466 233 8 30 492 34 485 2.06e-136 403
MS.gene015691.t1 AT2G44540 46.778 481 241 9 14 488 17 488 1.80e-135 400
MS.gene015691.t1 AT1G48930 48.291 468 229 8 29 488 29 491 6.48e-134 401
MS.gene015691.t1 AT2G44570 46.076 497 248 12 1 488 4 489 3.31e-133 395
MS.gene015691.t1 AT2G44560 46.985 481 240 9 14 488 17 488 1.60e-129 385
MS.gene015691.t1 AT1G19940 42.333 463 250 8 30 485 48 500 1.41e-117 355
MS.gene015691.t1 AT1G19940 42.333 463 250 8 30 485 48 500 1.41e-117 355
MS.gene015691.t1 AT1G22880 55.108 323 140 2 12 334 6 323 4.26e-115 343
MS.gene015691.t1 AT1G75680 43.413 463 245 9 26 481 53 505 2.06e-113 345
MS.gene015691.t1 AT4G38990 50.964 363 151 5 15 376 9 345 6.34e-112 335
MS.gene015691.t1 AT2G44570 43.415 410 214 10 1 402 4 403 6.32e-94 291
MS.gene015691.t1 AT1G19940 40.164 366 207 6 30 388 48 408 2.65e-82 261
MS.gene015691.t1 AT5G49720 37.403 516 270 17 17 493 88 589 2.32e-80 262
MS.gene015691.t1 AT4G24260 38.632 497 257 18 30 493 108 589 3.43e-79 259
MS.gene015691.t1 AT1G65610 36.864 491 268 17 30 492 116 592 7.06e-78 256
MS.gene015691.t1 AT4G24260 37.084 391 203 16 30 387 108 488 2.83e-49 176
MS.gene015691.t1 AT4G24260 39.185 319 160 12 30 320 108 420 3.83e-46 167
MS.gene015691.t1 AT3G42153 41.667 96 48 3 241 332 16 107 1.37e-13 67.8

Find 157 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGCATGGCTTAGGTAAT+TGG 0.218254 4.2:+1708815 None:intergenic
CCGTTTACATCACAGTAAAA+TGG 0.226605 4.2:+1712114 None:intergenic
GCTTGGAGTGTGATTGATTT+TGG 0.252189 4.2:-1712898 MS.gene015691:CDS
TCTTGTGCAGGAGGTGTTAA+TGG 0.257604 4.2:-1709345 MS.gene015691:intron
ACCACATGGCACAACCTTAT+TGG 0.262580 4.2:+1708797 None:intergenic
AGACATTTGGGTTAGGGTTT+GGG 0.278356 4.2:+1708343 None:intergenic
GATTAATGTCCTCATTTCTA+AGG 0.284719 4.2:-1711321 MS.gene015691:intron
TACTAGGTTAACTACATTCT+TGG 0.292991 4.2:-1708510 MS.gene015691:intron
CTGTGATGTAAACGGTTATC+AGG 0.307699 4.2:-1712106 MS.gene015691:intron
GTCCCAACCAAACTCATTAA+TGG 0.312220 4.2:+1711358 None:intergenic
ACTAGGTTAACTACATTCTT+GGG 0.314393 4.2:-1708509 MS.gene015691:intron
AAGACATTTGGGTTAGGGTT+TGG 0.317944 4.2:+1708342 None:intergenic
TGATAGAAAGGCCTGGAATC+AGG 0.354115 4.2:+1708273 None:intergenic
CAACAGTTGTGGTCCGATAA+AGG 0.356045 4.2:+1712757 None:intergenic
CCAACCAAGACATTTGGGTT+AGG 0.358950 4.2:+1708336 None:intergenic
ACAGCTCCAACCAAGACATT+TGG 0.360590 4.2:+1708330 None:intergenic
CTCCACTGGCGCCGTGACTC+TGG 0.373128 4.2:-1713101 MS.gene015691:CDS
CAGATTCGTTCCCTGATTCC+AGG 0.376102 4.2:-1708284 MS.gene015691:CDS
TTAAAGGCGACGTCAAATAT+AGG 0.380427 4.2:-1712811 MS.gene015691:CDS
TCAAGTCGGTGATCCTTTAT+CGG 0.388734 4.2:-1712770 MS.gene015691:CDS
TTACCTAAGCCATGCCAATA+AGG 0.396072 4.2:-1708811 MS.gene015691:CDS
AATTGGAATAAGCTAGTAAC+AGG 0.398288 4.2:+1708832 None:intergenic
TGCATCCAATGTGGGCTGGA+TGG 0.405346 4.2:+1708391 None:intergenic
TTTATTTGTTCAACATTGCC+TGG 0.407844 4.2:-1709278 MS.gene015691:CDS
TTGGGAGAGACCGGAAGATA+TGG 0.408576 4.2:-1712737 MS.gene015691:CDS
GCATCCAATGTGGGCTGGAT+GGG 0.408688 4.2:+1708392 None:intergenic
CAGCTCCAACCAAGACATTT+GGG 0.414539 4.2:+1708331 None:intergenic
GGTGACACCATTAATGAGTT+TGG 0.414729 4.2:-1711365 MS.gene015691:CDS
TCACCTGCCACGTCGGATCC+TGG 0.416771 4.2:+1712676 None:intergenic
CAACCAAGACATTTGGGTTA+GGG 0.416934 4.2:+1708337 None:intergenic
GCTTCTCAATCGTGCCGTTA+CGG 0.417509 4.2:-1712587 MS.gene015691:intron
AAAAGGTGGGCTTATCTTCA+AGG 0.417922 4.2:-1708895 MS.gene015691:intron
ATGTCCTACATGGTTGGTTA+TGG 0.418907 4.2:-1708471 MS.gene015691:CDS
AAGAGCATTCTCTTCTTTGA+AGG 0.419553 4.2:-1713158 MS.gene015691:CDS
TTCTTTGAAGGGCAACGCTC+TGG 0.422234 4.2:-1713146 MS.gene015691:CDS
CTTGTGCAGGAGGTGTTAAT+GGG 0.425782 4.2:-1709344 MS.gene015691:intron
CACCATTAATGAGTTTGGTT+GGG 0.435935 4.2:-1711360 MS.gene015691:CDS
TCGGAGCAAGAGGAGGAGTA+TGG 0.438334 4.2:+1713220 None:intergenic
AGTAAAATGGGCACACTGCC+CGG 0.438552 4.2:+1712127 None:intergenic
AGGGAATTGAGCTTCCTCTA+TGG 0.439505 4.2:+1708424 None:intergenic
CGTTTACATCACAGTAAAAT+GGG 0.440137 4.2:+1712115 None:intergenic
CAACCTTATTGGCATGGCTT+AGG 0.440764 4.2:+1708808 None:intergenic
CAAAGAAGAGAATGCTCTTA+CGG 0.445074 4.2:+1713162 None:intergenic
CATGACCGGCGGCTATTGTT+CGG 0.448804 4.2:+1713201 None:intergenic
CTCTATGGTGTATCCTCTGT+GGG 0.449617 4.2:+1708439 None:intergenic
GCCCACATTGGATGCAAAGC+TGG 0.453591 4.2:-1708384 MS.gene015691:CDS
CGCGTTGAAATCAGTGAGAT+GGG 0.460136 4.2:-1712848 MS.gene015691:CDS
GGTTGGGACAACAAGCATGC+TGG 0.465263 4.2:-1711344 MS.gene015691:CDS
GCCGGCGACAACATAAAGTT+CGG 0.465313 4.2:-1712952 MS.gene015691:CDS
CTGCCACGTCGGATCCTGGA+TGG 0.466367 4.2:+1712680 None:intergenic
AGAAGCAATTTAGAGTAAGC+AGG 0.468543 4.2:+1712604 None:intergenic
GGCTGCAGCGTGGTTGCACA+AGG 0.475533 4.2:-1711447 MS.gene015691:CDS
ACACCATTAATGAGTTTGGT+TGG 0.478749 4.2:-1711361 MS.gene015691:CDS
TTGTTTCAGGTGGACTTGAC+CGG 0.479741 4.2:-1712988 MS.gene015691:intron
CATCCAGGATCCGACGTGGC+AGG 0.480184 4.2:-1712679 MS.gene015691:CDS
CGTCTGATCAGCGTCTCCAC+TGG 0.482629 4.2:-1713115 MS.gene015691:CDS
TATATCAATGCACCACTTGT+GGG 0.486411 4.2:-1708231 MS.gene015691:CDS
GGCTCAGACTGCTGATAGAA+AGG 0.490540 4.2:+1708261 None:intergenic
AGCAGCGGCAAGTGCAGCGG+CGG 0.492359 4.2:+1712651 None:intergenic
AATGAAGCTGACCTGGCGTT+TGG 0.493543 4.2:+1708737 None:intergenic
GGCTGGATGGGCTGAAACTG+AGG 0.494550 4.2:+1708404 None:intergenic
GTTGGGACAACAAGCATGCT+GGG 0.495472 4.2:-1711343 MS.gene015691:CDS
AAGATCGATGAGTCCCATCC+AGG 0.496504 4.2:-1712694 MS.gene015691:CDS
CCGGCGACAACATAAAGTTC+GGG 0.496773 4.2:-1712951 MS.gene015691:CDS
CTCCAGAGTCACGGCGCCAG+TGG 0.498392 4.2:+1713099 None:intergenic
GCGACGTCAAATATAGGTTC+CGG 0.506748 4.2:-1712805 MS.gene015691:CDS
GTCTTGGTTGGAGCTGTAGT+TGG 0.509506 4.2:-1708324 MS.gene015691:CDS
TTTATCGGACCACAACTGTT+GGG 0.511695 4.2:-1712755 MS.gene015691:CDS
ATTCTTGGGGATAACCCGTT+GGG 0.513192 4.2:-1708495 MS.gene015691:CDS
TGGTTGGAGCTGTAGTTGGT+GGG 0.515521 4.2:-1708320 MS.gene015691:CDS
CCACAACTGTTGGGAGAGAC+CGG 0.516857 4.2:-1712746 MS.gene015691:CDS
GGCGTGGTGTTTGTTCAAGT+CGG 0.519329 4.2:-1712784 MS.gene015691:CDS
TGCCACGTCGGATCCTGGAT+GGG 0.519987 4.2:+1712681 None:intergenic
AGCTGACCTGGCGTTTGGCA+AGG 0.523073 4.2:+1708742 None:intergenic
GATAGAAAGGCCTGGAATCA+GGG 0.523647 4.2:+1708274 None:intergenic
CATTCTTGGGGATAACCCGT+TGG 0.526848 4.2:-1708496 MS.gene015691:CDS
CTTTATCGGACCACAACTGT+TGG 0.527242 4.2:-1712756 MS.gene015691:CDS
GCTTTGCATCCAATGTGGGC+TGG 0.528057 4.2:+1708387 None:intergenic
TTACAACGACGATGTTAGCT+TGG 0.531207 4.2:-1712915 MS.gene015691:CDS
CAAAAGCCTTGCCAAACGCC+AGG 0.531345 4.2:-1708748 MS.gene015691:intron
GAGTAATGCAGGGGTGGCAG+TGG 0.531443 4.2:+1708770 None:intergenic
CCTAACCCAAATGTCTTGGT+TGG 0.533587 4.2:-1708336 MS.gene015691:CDS
ACGCGTTGAAATCAGTGAGA+TGG 0.533916 4.2:-1712849 MS.gene015691:CDS
ACCGGAGGTTACTACGACGC+CGG 0.534390 4.2:-1712970 MS.gene015691:CDS
AGAGCATTCTCTTCTTTGAA+GGG 0.534984 4.2:-1713157 MS.gene015691:CDS
GGAAGCAGCGGCAAGTGCAG+CGG 0.536448 4.2:+1712648 None:intergenic
TTCAACGCGTTACCTAGCTC+AGG 0.537877 4.2:+1712862 None:intergenic
CATAAAGTTCGGGTTTCCGA+TGG 0.538039 4.2:-1712941 MS.gene015691:CDS
AAACCCTAACCCAAATGTCT+TGG 0.539421 4.2:-1708340 MS.gene015691:CDS
CAGTGGAGACGCTGATCAGA+CGG 0.540515 4.2:+1713116 None:intergenic
GGTGGGCTTATCTTCAAGGC+TGG 0.547963 4.2:-1708891 MS.gene015691:CDS
CCCGAACTTTATGTTGTCGC+CGG 0.549454 4.2:+1712951 None:intergenic
TTGGTTGGAGCTGTAGTTGG+TGG 0.549558 4.2:-1708321 MS.gene015691:CDS
CCATGTAGGACATTCCCAAC+GGG 0.549622 4.2:+1708481 None:intergenic
TTGGGAATGTCCTACATGGT+TGG 0.550043 4.2:-1708477 MS.gene015691:CDS
ATGAATGTACCTTAGAAATG+AGG 0.553073 4.2:+1711312 None:intergenic
AGAGTAATGGGACCTGAGCT+AGG 0.557595 4.2:-1712874 MS.gene015691:CDS
ATATATCAATGCACCACTTG+TGG 0.557918 4.2:-1708232 MS.gene015691:CDS
ATGGGCACACTGCCCGGCGT+AGG 0.558129 4.2:+1712133 None:intergenic
CCCGTTGGGAATGTCCTACA+TGG 0.560864 4.2:-1708481 MS.gene015691:CDS
AGGGAACGAATCTGTAGTGT+TGG 0.563833 4.2:+1708293 None:intergenic
AATGAGGCTTACTCCGGCGG+TGG 0.574014 4.2:+1713064 None:intergenic
CCTCTATGGTGTATCCTCTG+TGG 0.576842 4.2:+1708438 None:intergenic
CGTAACGTATCCATATCTTC+CGG 0.577286 4.2:+1712727 None:intergenic
GGGCTTATCTTCAAGGCTGG+TGG 0.577298 4.2:-1708888 MS.gene015691:CDS
CGGCTATTGTTCGGAGCAAG+AGG 0.578287 4.2:+1713210 None:intergenic
TCCAGCTTTGCATCCAATGT+GGG 0.583568 4.2:+1708383 None:intergenic
GTTCACGACGGTGCCACCGC+CGG 0.584030 4.2:-1713077 MS.gene015691:CDS
ATGGCACAACCTTATTGGCA+TGG 0.584108 4.2:+1708802 None:intergenic
GCCGGCGTCGTAGTAACCTC+CGG 0.585051 4.2:+1712969 None:intergenic
ACTTGTGCGTGAGAAAATCC+AGG 0.592850 4.2:+1709260 None:intergenic
GCTGGATGGGCTGAAACTGA+GGG 0.599624 4.2:+1708405 None:intergenic
AGTGGAGACGCTGATCAGAC+GGG 0.602320 4.2:+1713117 None:intergenic
TCAGCCCATCCAGCCCACAT+TGG 0.602704 4.2:-1708396 MS.gene015691:CDS
TTGCTCCGAACAATAGCCGC+CGG 0.603030 4.2:-1713206 MS.gene015691:CDS
ATACAGTAACAGCCTACGCC+GGG 0.603079 4.2:-1712145 MS.gene015691:CDS
CTAGGTTAACTACATTCTTG+GGG 0.606445 4.2:-1708508 MS.gene015691:intron
CCGGTCTCTCCCAACAGTTG+TGG 0.609233 4.2:+1712746 None:intergenic
AGACTGCTGATAGAAAGGCC+TGG 0.611163 4.2:+1708266 None:intergenic
GTGGCAGTGGTGTCACCACA+TGG 0.614304 4.2:+1708783 None:intergenic
ATGAAAGCGACGCACCGTAA+CGG 0.614765 4.2:+1712573 None:intergenic
GAAATCAGTGAGATGGGGAA+CGG 0.616960 4.2:-1712842 MS.gene015691:CDS
ATCCAGCTTTGCATCCAATG+TGG 0.619352 4.2:+1708382 None:intergenic
TATGGTGAGGACGTGAAATG+TGG 0.622008 4.2:+1713238 None:intergenic
ATCGTCGTTGTAAACGCCAT+CGG 0.625054 4.2:+1712925 None:intergenic
AGCATCGTGATAGTCATGAC+CGG 0.628298 4.2:+1713187 None:intergenic
TGAAATGAGGCTTACTCCGG+CGG 0.629033 4.2:+1713061 None:intergenic
GGAATAAGCTAGTAACAGGA+AGG 0.629980 4.2:+1708836 None:intergenic
CATACAGTAACAGCCTACGC+CGG 0.630726 4.2:-1712146 MS.gene015691:CDS
AACGAATCTGTAGTGTTGGT+AGG 0.633183 4.2:+1708297 None:intergenic
GCACAAGTTCAATATTCCCC+AGG 0.635190 4.2:-1709245 MS.gene015691:intron
ACCATGTAGGACATTCCCAA+CGG 0.636931 4.2:+1708480 None:intergenic
GCCAATAAGGTTGTGCCATG+TGG 0.639947 4.2:-1708798 MS.gene015691:CDS
TTTACCATAACCAACCATGT+AGG 0.642081 4.2:+1708467 None:intergenic
AGCTAGTAACAGGAAGGACA+AGG 0.643966 4.2:+1708842 None:intergenic
TGGTGCATTGATATATGTCG+TGG 0.645002 4.2:+1708239 None:intergenic
GCAAGAGGAGGAGTATGGTG+AGG 0.645531 4.2:+1713225 None:intergenic
CGTCGTGAACTCCAGAGTCA+CGG 0.647979 4.2:+1713090 None:intergenic
CTATTGTTCGGAGCAAGAGG+AGG 0.650404 4.2:+1713213 None:intergenic
CCACAGAGGATACACCATAG+AGG 0.656279 4.2:-1708438 MS.gene015691:CDS
GGCGGTTTCACCTGCCACGT+CGG 0.660020 4.2:+1712669 None:intergenic
TCTGAACACGATGGAAGCAG+CGG 0.661950 4.2:+1712636 None:intergenic
AAAGCGAGCAGACCCACAAG+TGG 0.662208 4.2:+1708219 None:intergenic
TTTCAGGTGGACTTGACCGG+AGG 0.664744 4.2:-1712985 MS.gene015691:intron
GTCAAATATAGGTTCCGGCG+TGG 0.689424 4.2:-1712800 MS.gene015691:CDS
AGTTGCTTTGGGCTGCAGCG+TGG 0.693038 4.2:-1711457 MS.gene015691:CDS
TCTGTATAGACGTCTACGCG+AGG 0.693382 4.2:+1711424 None:intergenic
GGTGCATTGATATATGTCGT+GGG 0.694250 4.2:+1708240 None:intergenic
GCGTTGAAATCAGTGAGATG+GGG 0.698342 4.2:-1712847 MS.gene015691:CDS
GTCCCATCCAGGATCCGACG+TGG 0.700396 4.2:-1712683 MS.gene015691:CDS
GAGTTTGCTGACAGACATCG+TGG 0.705042 4.2:-1712171 MS.gene015691:CDS
ATCACGTGATCTGAACACGA+TGG 0.718797 4.2:+1712627 None:intergenic
AGAATACATTATTCGTAACG+AGG 0.719570 4.2:-1711402 MS.gene015691:CDS
GACTTGAACAAACACCACGC+CGG 0.721498 4.2:+1712786 None:intergenic
ATGGTAAACGCTACCCACAG+AGG 0.727149 4.2:-1708452 MS.gene015691:CDS
ATCGTGATAGTCATGACCGG+CGG 0.739878 4.2:+1713190 None:intergenic
CGTGACTCTGGAGTTCACGA+CGG 0.743098 4.2:-1713089 MS.gene015691:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATTTAATTTAATTAAT+TGG - chr4.2:1709962-1709981 MS.gene015691:intron 0.0%
!! AAATTAAATGAAACTAATTA+AGG + chr4.2:1711628-1711647 None:intergenic 10.0%
!! AATGAGATATTAAATAAATA+AGG - chr4.2:1710409-1710428 MS.gene015691:intron 10.0%
!! AATTAAATGAAACTAATTAA+GGG + chr4.2:1711627-1711646 None:intergenic 10.0%
!! AGAAAAATATATAAATAAAG+GGG + chr4.2:1709591-1709610 None:intergenic 10.0%
!!! TAATATTCATATTTTATTCA+TGG + chr4.2:1712096-1712115 None:intergenic 10.0%
!!! TTTAGTTTATTTAATATAAC+CGG + chr4.2:1711021-1711040 None:intergenic 10.0%
!! AAAAGAAAAAACATTAATGA+TGG + chr4.2:1712382-1712401 None:intergenic 15.0%
!! AATCTCATAAATAAATTCAA+TGG + chr4.2:1711461-1711480 None:intergenic 15.0%
!! ATTAAATGAAACTAATTAAG+GGG + chr4.2:1711626-1711645 None:intergenic 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + chr4.2:1709527-1709546 None:intergenic 15.0%
!! TAAAAAAATGAAGAAAAGAA+AGG + chr4.2:1708960-1708979 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr4.2:1709528-1709547 None:intergenic 15.0%
!! TTATTTAAATGCTATAATCA+CGG + chr4.2:1712313-1712332 None:intergenic 15.0%
!!! CATTTAATTTTTTTTAGTTC+TGG - chr4.2:1711638-1711657 MS.gene015691:intron 15.0%
!!! TTAATTTGACTTTATCTAAT+TGG - chr4.2:1711115-1711134 MS.gene015691:intron 15.0%
!! AAAAAGTGAAATTAAATTCC+CGG + chr4.2:1709134-1709153 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + chr4.2:1709495-1709514 None:intergenic 20.0%
!! ATGATTAATGTATGCATATT+GGG + chr4.2:1710804-1710823 None:intergenic 20.0%
!! ATTAAAAAACAAAGCAATGT+AGG + chr4.2:1708449-1708468 None:intergenic 20.0%
!! CTCAAAAGTCAAAAATAAAT+GGG + chr4.2:1712278-1712297 None:intergenic 20.0%
!! CTTAAAAAGTTGTTGAAAAT+TGG - chr4.2:1709831-1709850 MS.gene015691:intron 20.0%
!! GCTTGAATAATAAACAAAAA+CGG + chr4.2:1711387-1711406 None:intergenic 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG + chr4.2:1709494-1709513 None:intergenic 20.0%
!! TATGATTAATGTATGCATAT+TGG + chr4.2:1710805-1710824 None:intergenic 20.0%
!! TCAAAATGTGACAATTAAAA+AGG - chr4.2:1710506-1710525 MS.gene015691:intron 20.0%
!! TCTCAAAAGTCAAAAATAAA+TGG + chr4.2:1712279-1712298 None:intergenic 20.0%
!! TTAAAAAAAAGTTACCACAA+TGG + chr4.2:1711820-1711839 None:intergenic 20.0%
!!! AATATTATTTTATCTTGTGC+AGG - chr4.2:1712109-1712128 MS.gene015691:CDS 20.0%
!!! AATTTGTCTTTAAAACTTGT+AGG - chr4.2:1711499-1711518 MS.gene015691:intron 20.0%
!!! ACAATATTTATTGATTGTCT+TGG - chr4.2:1710470-1710489 MS.gene015691:intron 20.0%
!!! ATCTAATCAAGTTTAAGATA+AGG + chr4.2:1710973-1710992 None:intergenic 20.0%
!!! ATTACCCTTATTTATTATTG+TGG - chr4.2:1710370-1710389 MS.gene015691:intron 20.0%
!!! ATTTTTTTTAGTTCTGGAAA+TGG - chr4.2:1711644-1711663 MS.gene015691:intron 20.0%
!!! CAATTTTCAACAACTTTTTA+AGG + chr4.2:1709833-1709852 None:intergenic 20.0%
!!! CTAAAAAAAGCAATTTTGTT+TGG - chr4.2:1709014-1709033 MS.gene015691:intron 20.0%
!!! CTTTGTTTTTTAATTTGTTG+TGG - chr4.2:1708455-1708474 MS.gene015691:CDS 20.0%
!!! CTTTTTATTTTATATTGCAC+AGG + chr4.2:1712073-1712092 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + chr4.2:1709458-1709477 None:intergenic 20.0%
!!! TAAAATTTTCCGTTAAGATA+TGG - chr4.2:1709227-1709246 MS.gene015691:intron 20.0%
!!! TAATGTTTTTTCTTTTTGCA+AGG - chr4.2:1712386-1712405 MS.gene015691:intron 20.0%
!!! TTATTTTTGACTTTTGAGAA+AGG - chr4.2:1712280-1712299 MS.gene015691:intron 20.0%
!!! TTCATTTTTAAGTTTCATGT+GGG - chr4.2:1711359-1711378 MS.gene015691:CDS 20.0%
!!! TTGTTATTGTCCAATAATAA+TGG - chr4.2:1709793-1709812 MS.gene015691:intron 20.0%
!!! TTTCATTTTTAAGTTTCATG+TGG - chr4.2:1711358-1711377 MS.gene015691:CDS 20.0%
!!! TTTTTTTCTGTTATGAATCA+CGG - chr4.2:1709173-1709192 MS.gene015691:intron 20.0%
! AAAAACATTAATGATGGCTT+AGG + chr4.2:1712376-1712395 None:intergenic 25.0%
! AAAAGGAAGAGAGAAAATAA+AGG + chr4.2:1709763-1709782 None:intergenic 25.0%
! AAAGTGGAATATAGTGTATT+GGG + chr4.2:1709568-1709587 None:intergenic 25.0%
! ATAACAATAGAGAGAGAAAA+AGG + chr4.2:1709780-1709799 None:intergenic 25.0%
! ATGAGATTGATTGATATCAA+GGG - chr4.2:1711473-1711492 MS.gene015691:intron 25.0%
! ATGTAAAGTGACACTTAAAT+AGG + chr4.2:1710316-1710335 None:intergenic 25.0%
! ATGTGACAATTAAAAAGGAA+CGG - chr4.2:1710511-1710530 MS.gene015691:intron 25.0%
! ATTAATTGGAAAATCACTTG+TGG - chr4.2:1709976-1709995 MS.gene015691:intron 25.0%
! GTAATACAGTAAGTATTAAG+AGG + chr4.2:1709873-1709892 None:intergenic 25.0%
! GTTAACAATGTAAAAAAGGT+GGG - chr4.2:1712558-1712577 MS.gene015691:intron 25.0%
! GTTGGTTAACAATGTAAAAA+AGG - chr4.2:1712554-1712573 MS.gene015691:intron 25.0%
! TATATAAATAAAGGGGAAAG+TGG + chr4.2:1709584-1709603 None:intergenic 25.0%
! TATCTATCCAAAAAGTCATT+GGG - chr4.2:1711971-1711990 MS.gene015691:intron 25.0%
! TATGAGATTGATTGATATCA+AGG - chr4.2:1711472-1711491 MS.gene015691:intron 25.0%
! TGAAATTGTGCAGAAAATAA+TGG + chr4.2:1711710-1711729 None:intergenic 25.0%
! TGATGTTGAAAACAAGAAAT+TGG + chr4.2:1712779-1712798 None:intergenic 25.0%
! TGTGGTGTGAAAATAATTAA+TGG + chr4.2:1710895-1710914 None:intergenic 25.0%
! TTATTGTCCAATAATAATGG+AGG - chr4.2:1709796-1709815 MS.gene015691:intron 25.0%
! TTCAAAAGTGACACTTAAAA+AGG + chr4.2:1710280-1710299 None:intergenic 25.0%
!! ACTAAGTACTACAGTATTTT+AGG - chr4.2:1710218-1710237 MS.gene015691:intron 25.0%
!! ATTTGACTTTATCTAATTGG+TGG - chr4.2:1711118-1711137 MS.gene015691:intron 25.0%
!! ATTTTCTCACCATATCTTAA+CGG + chr4.2:1709239-1709258 None:intergenic 25.0%
!! TTTGACTTTATCTAATTGGT+GGG - chr4.2:1711119-1711138 MS.gene015691:intron 25.0%
!!! ATTGATTTTGGAAGAGTAAT+GGG - chr4.2:1708580-1708599 MS.gene015691:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + chr4.2:1709459-1709478 None:intergenic 25.0%
!!! TCTCTAAGATTAGTAGTATT+TGG - chr4.2:1709903-1709922 MS.gene015691:intron 25.0%
AAACTTGTAGGACTAGAATT+TGG - chr4.2:1711511-1711530 MS.gene015691:intron 30.0%
AAAGAAACAAACAAACACTG+TGG + chr4.2:1712508-1712527 None:intergenic 30.0%
AACTGTGCACAATACTAAAT+AGG + chr4.2:1712457-1712476 None:intergenic 30.0%
AACTTGTAGGACTAGAATTT+GGG - chr4.2:1711512-1711531 MS.gene015691:intron 30.0%
AAGTGACACTTAAAAAGGAA+CGG + chr4.2:1710275-1710294 None:intergenic 30.0%
AATGAGGGAATATATATACC+TGG + chr4.2:1712242-1712261 None:intergenic 30.0%
AATTGGAATAAGCTAGTAAC+AGG + chr4.2:1712637-1712656 None:intergenic 30.0%
ACATACAAACACTCAATCTA+AGG + chr4.2:1712417-1712436 None:intergenic 30.0%
ACATTGTTAACCAACAAAAG+AGG + chr4.2:1712549-1712568 None:intergenic 30.0%
ACGTGATATATACACAAAGT+TGG - chr4.2:1712871-1712890 MS.gene015691:CDS 30.0%
ACTAGGTTAACTACATTCTT+GGG - chr4.2:1712957-1712976 MS.gene015691:CDS 30.0%
ACTGTGCACAATACTAAATA+GGG + chr4.2:1712456-1712475 None:intergenic 30.0%
AGAATACATTATTCGTAACG+AGG - chr4.2:1710064-1710083 MS.gene015691:intron 30.0%
AGGAATAATAGAGTCCTAAT+TGG + chr4.2:1710770-1710789 None:intergenic 30.0%
AGTCAATGGGTCAAATAAAT+TGG - chr4.2:1709627-1709646 MS.gene015691:intron 30.0%
ATATTGCACAGGTTAATAGT+CGG + chr4.2:1712062-1712081 None:intergenic 30.0%
ATCCAAAGTTCCAATTATCA+CGG + chr4.2:1711418-1711437 None:intergenic 30.0%
ATGAATGTACCTTAGAAATG+AGG + chr4.2:1710157-1710176 None:intergenic 30.0%
ATGAGGGAATATATATACCT+GGG + chr4.2:1712241-1712260 None:intergenic 30.0%
ATGTTTATGTGAGTACAGAT+TGG - chr4.2:1711214-1711233 MS.gene015691:intron 30.0%
CAAGAAATATGATGTTGATG+GGG + chr4.2:1711777-1711796 None:intergenic 30.0%
CACAATTTCACTTTCTATCA+GGG - chr4.2:1711720-1711739 MS.gene015691:intron 30.0%
CACAGTTATTATTGCATAGA+CGG - chr4.2:1712470-1712489 MS.gene015691:intron 30.0%
CCCTCCACAATAATAAATAA+GGG + chr4.2:1710377-1710396 None:intergenic 30.0%
CGTTTACATCACAGTAAAAT+GGG + chr4.2:1709354-1709373 None:intergenic 30.0%
CTATCTATCCAAAAAGTCAT+TGG - chr4.2:1711970-1711989 MS.gene015691:intron 30.0%
CTGCTTCAATGAAATTAACA+GGG + chr4.2:1710194-1710213 None:intergenic 30.0%
GAAAGTGGAATATAGTGTAT+TGG + chr4.2:1709569-1709588 None:intergenic 30.0%
GATTAATGTCCTCATTTCTA+AGG - chr4.2:1710145-1710164 MS.gene015691:intron 30.0%
GCAAGAAATATGATGTTGAT+GGG + chr4.2:1711778-1711797 None:intergenic 30.0%
GGTTAACAATGTAAAAAAGG+TGG - chr4.2:1712557-1712576 MS.gene015691:intron 30.0%
GTCAATGGGTCAAATAAATT+GGG - chr4.2:1709628-1709647 MS.gene015691:intron 30.0%
TAATGTATGCATATTGGGAA+TGG + chr4.2:1710799-1710818 None:intergenic 30.0%
TACTAGGTTAACTACATTCT+TGG - chr4.2:1712956-1712975 MS.gene015691:CDS 30.0%
TAGGACTCTATTATTCCTAT+TGG - chr4.2:1710772-1710791 MS.gene015691:intron 30.0%
TCAACATCAGACAAAACTAA+CGG - chr4.2:1712790-1712809 MS.gene015691:CDS 30.0%
TCAAGATAGCAATGAGAAAA+GGG - chr4.2:1711294-1711313 MS.gene015691:intron 30.0%
TCCCTCCACAATAATAAATA+AGG + chr4.2:1710378-1710397 None:intergenic 30.0%
TGAGATTGATTGATATCAAG+GGG - chr4.2:1711474-1711493 MS.gene015691:intron 30.0%
TGCAAGAAATATGATGTTGA+TGG + chr4.2:1711779-1711798 None:intergenic 30.0%
TGTTCCAAATGTTTACGATA+TGG + chr4.2:1711593-1711612 None:intergenic 30.0%
TTTCAATACCAATCACCAAA+CGG + chr4.2:1711273-1711292 None:intergenic 30.0%
TTTGTTACTAGTATGTGTGT+GGG - chr4.2:1710572-1710591 MS.gene015691:intron 30.0%
! AAGAAATATGATGTTGATGG+GGG + chr4.2:1711776-1711795 None:intergenic 30.0%
! ACCCTTATTTATTATTGTGG+AGG - chr4.2:1710373-1710392 MS.gene015691:intron 30.0%
! AGAGGAAGTTTGAGTTATTT+AGG + chr4.2:1712531-1712550 None:intergenic 30.0%
! ATTTGTTACTAGTATGTGTG+TGG - chr4.2:1710571-1710590 MS.gene015691:intron 30.0%
! CCAATAATAATGGAGGAAAA+AGG - chr4.2:1709803-1709822 MS.gene015691:intron 30.0%
! CCATTTTACTGTGATGTAAA+CGG - chr4.2:1709352-1709371 MS.gene015691:intron 30.0%
! CCCTTATTTATTATTGTGGA+GGG - chr4.2:1710374-1710393 MS.gene015691:intron 30.0%
! CCTTTTTCCTCCATTATTAT+TGG + chr4.2:1709806-1709825 None:intergenic 30.0%
! TACAAAACCCAATGACTTTT+TGG + chr4.2:1711981-1712000 None:intergenic 30.0%
! TAGAAAAAGCTTTATCCGTT+TGG - chr4.2:1711255-1711274 MS.gene015691:intron 30.0%
! TATAACCGGTTTACTATAAG+CGG + chr4.2:1711007-1711026 None:intergenic 30.0%
! TCACCGTTGATTAATTCTTT+GGG - chr4.2:1712752-1712771 MS.gene015691:CDS 30.0%
! TTCACCGTTGATTAATTCTT+TGG - chr4.2:1712751-1712770 MS.gene015691:CDS 30.0%
! TTGAAATGGGTCAGTTATTT+TGG + chr4.2:1709481-1709500 None:intergenic 30.0%
!! AAAAGTCATTGGGTTTTGTA+CGG - chr4.2:1711981-1712000 MS.gene015691:intron 30.0%
!! ACCACTTTTCAAATTTACCA+CGG + chr4.2:1709071-1709090 None:intergenic 30.0%
!! ATTATTTTATCTTGTGCAGG+AGG - chr4.2:1712112-1712131 MS.gene015691:CDS 30.0%
!! GATTGATTTTGGAAGAGTAA+TGG - chr4.2:1708579-1708598 MS.gene015691:intron 30.0%
!! GTAGGAGTATTTAATACTTG+AGG - chr4.2:1709670-1709689 MS.gene015691:intron 30.0%
!! TAATTTGTTGTGGTTGTTTC+AGG - chr4.2:1708465-1708484 MS.gene015691:CDS 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG + chr4.2:1709480-1709499 None:intergenic 30.0%
!!! TTTTTAGTTCTGGAAATGGA+TGG - chr4.2:1711648-1711667 MS.gene015691:intron 30.0%
ACACCATTAATGAGTTTGGT+TGG - chr4.2:1710105-1710124 MS.gene015691:intron 35.0%
ACAGAACAATACCTCTTTGA+TGG - chr4.2:1709406-1709425 MS.gene015691:intron 35.0%
ACCGTGGTAAATTTGAAAAG+TGG - chr4.2:1709067-1709086 MS.gene015691:intron 35.0%
AGAAAATGGGTCAGTTATTC+CGG + chr4.2:1709445-1709464 None:intergenic 35.0%
AGGGAACTTTATCACTAGAT+TGG + chr4.2:1710709-1710728 None:intergenic 35.0%
ATATATCAATGCACCACTTG+TGG - chr4.2:1713234-1713253 MS.gene015691:CDS 35.0%
ATCTGTGTGAAATGAGTCAA+TGG - chr4.2:1709613-1709632 MS.gene015691:intron 35.0%
ATGCATGGTACAACAAGAAA+GGG - chr4.2:1711190-1711209 MS.gene015691:intron 35.0%
ATGGGTCAAATAAATTGGGA+CGG - chr4.2:1709632-1709651 MS.gene015691:intron 35.0%
CAAAGAAGAGAATGCTCTTA+CGG + chr4.2:1708307-1708326 None:intergenic 35.0%
CAAGATAGCAATGAGAAAAG+GGG - chr4.2:1711295-1711314 MS.gene015691:intron 35.0%
CAATGGTGTGTTACAAGAAA+AGG + chr4.2:1711803-1711822 None:intergenic 35.0%
CACCATTAATGAGTTTGGTT+GGG - chr4.2:1710106-1710125 MS.gene015691:intron 35.0%
CCGTTTACATCACAGTAAAA+TGG + chr4.2:1709355-1709374 None:intergenic 35.0%
CTAGGTTAACTACATTCTTG+GGG - chr4.2:1712958-1712977 MS.gene015691:CDS 35.0%
CTTCAATGAAATTAACAGGG+AGG + chr4.2:1710191-1710210 None:intergenic 35.0%
GCACAATTTCACTTTCTATC+AGG - chr4.2:1711719-1711738 MS.gene015691:intron 35.0%
GCTGCTTCAATGAAATTAAC+AGG + chr4.2:1710195-1710214 None:intergenic 35.0%
GCTTTAATCTGAACCAAACT+GGG - chr4.2:1711549-1711568 MS.gene015691:intron 35.0%
GGCAAAACAAAACACAATGA+GGG + chr4.2:1712257-1712276 None:intergenic 35.0%
GGTCCCAAAGAATTAATCAA+CGG + chr4.2:1712758-1712777 None:intergenic 35.0%
GTAATCCGCTTATAGTAAAC+CGG - chr4.2:1710999-1711018 MS.gene015691:intron 35.0%
GTCAAGATAGCAATGAGAAA+AGG - chr4.2:1711293-1711312 MS.gene015691:intron 35.0%
TATATCAATGCACCACTTGT+GGG - chr4.2:1713235-1713254 MS.gene015691:CDS 35.0%
TATGCATGGTACAACAAGAA+AGG - chr4.2:1711189-1711208 MS.gene015691:intron 35.0%
TATTGCATAGACGGCAATAT+TGG - chr4.2:1712479-1712498 MS.gene015691:intron 35.0%
TCCAAATGTTTACGATATGG+AGG + chr4.2:1711590-1711609 None:intergenic 35.0%
TCTGTGTGAAATGAGTCAAT+GGG - chr4.2:1709614-1709633 MS.gene015691:intron 35.0%
TGACAATTAAAAAGGAACGG+AGG - chr4.2:1710514-1710533 MS.gene015691:intron 35.0%
TGAGGGAATATATATACCTG+GGG + chr4.2:1712240-1712259 None:intergenic 35.0%
TTAAAGGCGACGTCAAATAT+AGG - chr4.2:1708655-1708674 MS.gene015691:intron 35.0%
TTATGAATCACGGAGTTAGT+TGG - chr4.2:1709183-1709202 MS.gene015691:intron 35.0%
TTCCGTGATAATTGGAACTT+TGG - chr4.2:1711413-1711432 MS.gene015691:CDS 35.0%
TTGTGCAGAAAATAATGGTG+AGG + chr4.2:1711705-1711724 None:intergenic 35.0%
TTTACCATAACCAACCATGT+AGG + chr4.2:1713002-1713021 None:intergenic 35.0%
TTTCTTGTAACACACCATTG+TGG - chr4.2:1711803-1711822 MS.gene015691:intron 35.0%
! ACTCAAACTTCCTCTTTTGT+TGG - chr4.2:1712536-1712555 MS.gene015691:intron 35.0%
! AGAAGCAATTTAGAGTAAGC+AGG + chr4.2:1708865-1708884 None:intergenic 35.0%
! AGAGCATTCTCTTCTTTGAA+GGG - chr4.2:1708309-1708328 MS.gene015691:CDS 35.0%
! CGTTGCTTTCATTTACTACT+AGG - chr4.2:1712940-1712959 MS.gene015691:CDS 35.0%
! GGAAAATCACTTGTGGTTTT+AGG - chr4.2:1709983-1710002 MS.gene015691:intron 35.0%
!! AAAGTCATTGGGTTTTGTAC+GGG - chr4.2:1711982-1712001 MS.gene015691:intron 35.0%
!! AAGAGCATTCTCTTCTTTGA+AGG - chr4.2:1708308-1708327 MS.gene015691:CDS 35.0%
!! TTAAGTGAAGTGCTCTGTTT+TGG + chr4.2:1710867-1710886 None:intergenic 35.0%
!!! GTTTTAGGATGAGTTGCTTT+GGG - chr4.2:1709998-1710017 MS.gene015691:intron 35.0%
AAACCCTAACCCAAATGTCT+TGG - chr4.2:1713126-1713145 MS.gene015691:CDS 40.0%
AGAGAGAAGATTGCATGGAA+TGG + chr4.2:1708921-1708940 None:intergenic 40.0%
ATGTGAAATGAGGCTTACTC+CGG + chr4.2:1708411-1708430 None:intergenic 40.0%
ATTCTGTTAGGTCAGAGACA+CGG - chr4.2:1712005-1712024 MS.gene015691:intron 40.0%
ATTGGCATGGCTTAGGTAAT+TGG + chr4.2:1712654-1712673 None:intergenic 40.0%
CAGAAGAAACACAATGCATG+TGG + chr4.2:1710913-1710932 None:intergenic 40.0%
CATATTGGGAATGGACCAAT+AGG + chr4.2:1710790-1710809 None:intergenic 40.0%
CGCTTTAATCTGAACCAAAC+TGG - chr4.2:1711548-1711567 MS.gene015691:intron 40.0%
CGTAACGTATCCATATCTTC+CGG + chr4.2:1708742-1708761 None:intergenic 40.0%
CTGTGATGTAAACGGTTATC+AGG - chr4.2:1709360-1709379 MS.gene015691:intron 40.0%
GAAAATGGGTCAGTTATTCC+GGG + chr4.2:1709444-1709463 None:intergenic 40.0%
GAATCTATGACACGATGAAG+AGG - chr4.2:1711149-1711168 MS.gene015691:intron 40.0%
GACACTTAAAAAGGAACGGA+GGG + chr4.2:1710271-1710290 None:intergenic 40.0%
GAGAGAAGATTGCATGGAAT+GGG + chr4.2:1708920-1708939 None:intergenic 40.0%
GATAAAGTTCCCTTATCACG+TGG - chr4.2:1710716-1710735 MS.gene015691:intron 40.0%
GCAAGACATTCCGTGATAAT+TGG - chr4.2:1711405-1711424 MS.gene015691:CDS 40.0%
GCCTCCATATCGTAAACATT+TGG - chr4.2:1711586-1711605 MS.gene015691:intron 40.0%
GGAATAAGCTAGTAACAGGA+AGG + chr4.2:1712633-1712652 None:intergenic 40.0%
GGGCAAAACAAAACACAATG+AGG + chr4.2:1712258-1712277 None:intergenic 40.0%
GGTGACACCATTAATGAGTT+TGG - chr4.2:1710101-1710120 MS.gene015691:intron 40.0%
GTCAAATAAATTGGGACGGA+GGG - chr4.2:1709636-1709655 MS.gene015691:intron 40.0%
GTCCCAACCAAACTCATTAA+TGG + chr4.2:1710111-1710130 None:intergenic 40.0%
GTGATGCACTTTCTCCAATT+AGG - chr4.2:1710753-1710772 MS.gene015691:intron 40.0%
TCAAGTCGGTGATCCTTTAT+CGG - chr4.2:1708696-1708715 MS.gene015691:intron 40.0%
TGACACTTAAAAAGGAACGG+AGG + chr4.2:1710272-1710291 None:intergenic 40.0%
TTAATCTGAACCAAACTGGG+TGG - chr4.2:1711552-1711571 MS.gene015691:intron 40.0%
TTAATGATGGCTTAGGCCTT+TGG + chr4.2:1712369-1712388 None:intergenic 40.0%
TTACAACGACGATGTTAGCT+TGG - chr4.2:1708551-1708570 MS.gene015691:intron 40.0%
TTACAGAACAGTGACAGCAA+GGG + chr4.2:1711852-1711871 None:intergenic 40.0%
TTACCTAAGCCATGCCAATA+AGG - chr4.2:1712655-1712674 MS.gene015691:CDS 40.0%
TTGTAGGACTAGAATTTGGG+TGG - chr4.2:1711515-1711534 MS.gene015691:intron 40.0%
TTTATCGGACCACAACTGTT+GGG - chr4.2:1708711-1708730 MS.gene015691:intron 40.0%
! AAAAGGTGGGCTTATCTTCA+AGG - chr4.2:1712571-1712590 MS.gene015691:intron 40.0%
! AAGACATTTGGGTTAGGGTT+TGG + chr4.2:1713127-1713146 None:intergenic 40.0%
! ACAGAGCACTATGTGAAATG+AGG + chr4.2:1708421-1708440 None:intergenic 40.0%
! AGACATTTGGGTTAGGGTTT+GGG + chr4.2:1713126-1713145 None:intergenic 40.0%
! AGCTTTATCCGTTTGGTGAT+TGG - chr4.2:1711262-1711281 MS.gene015691:intron 40.0%
! ATGTCCTACATGGTTGGTTA+TGG - chr4.2:1712995-1713014 MS.gene015691:intron 40.0%
! CAACCAAGACATTTGGGTTA+GGG + chr4.2:1713132-1713151 None:intergenic 40.0%
! GGTGCATTGATATATGTCGT+GGG + chr4.2:1713229-1713248 None:intergenic 40.0%
! GTTTTGTACGGGATTCTGTT+AGG - chr4.2:1711993-1712012 MS.gene015691:intron 40.0%
! TAAATTCCCGGTAAAGTGCT+TGG + chr4.2:1709122-1709141 None:intergenic 40.0%
! TATCTAATTGGTGGGTCACA+TGG - chr4.2:1711127-1711146 MS.gene015691:intron 40.0%
! TGGTGCATTGATATATGTCG+TGG + chr4.2:1713230-1713249 None:intergenic 40.0%
! TGTTGATGGGGGCTTAAAAA+AGG + chr4.2:1711765-1711784 None:intergenic 40.0%
! TTTGTTGTGGTTGTTTCAGG+TGG - chr4.2:1708468-1708487 MS.gene015691:CDS 40.0%
!! AACGAATCTGTAGTGTTGGT+AGG + chr4.2:1713172-1713191 None:intergenic 40.0%
!! AAGGCTTTTGAGTAATGCAG+GGG + chr4.2:1712708-1712727 None:intergenic 40.0%
!! CAAGGCTTTTGAGTAATGCA+GGG + chr4.2:1712709-1712728 None:intergenic 40.0%
!! GCTTGGAGTGTGATTGATTT+TGG - chr4.2:1708568-1708587 MS.gene015691:intron 40.0%
!!! CTGTTTTGGTGTTTTGCTTG+TGG + chr4.2:1710853-1710872 None:intergenic 40.0%
!!! GGGAACGGACTATCTTTTAA+AGG - chr4.2:1708639-1708658 MS.gene015691:intron 40.0%
!!! GGTTTTAGGATGAGTTGCTT+TGG - chr4.2:1709997-1710016 MS.gene015691:intron 40.0%
AACGGGGAATGCAAGACAAT+AGG + chr4.2:1710641-1710660 None:intergenic 45.0%
ACAGACAGACCACGTGATAA+GGG + chr4.2:1710728-1710747 None:intergenic 45.0%
ACAGCTCCAACCAAGACATT+TGG + chr4.2:1713139-1713158 None:intergenic 45.0%
ACCACATGGCACAACCTTAT+TGG + chr4.2:1712672-1712691 None:intergenic 45.0%
ACCATGTAGGACATTCCCAA+CGG + chr4.2:1712989-1713008 None:intergenic 45.0%
ACGCGTTGAAATCAGTGAGA+TGG - chr4.2:1708617-1708636 MS.gene015691:intron 45.0%
ACTTGTGCGTGAGAAAATCC+AGG + chr4.2:1712209-1712228 None:intergenic 45.0%
AGCATCGTGATAGTCATGAC+CGG + chr4.2:1708282-1708301 None:intergenic 45.0%
AGCTAGTAACAGGAAGGACA+AGG + chr4.2:1712627-1712646 None:intergenic 45.0%
AGGGAACGAATCTGTAGTGT+TGG + chr4.2:1713176-1713195 None:intergenic 45.0%
AGGGAATTGAGCTTCCTCTA+TGG + chr4.2:1713045-1713064 None:intergenic 45.0%
ATCACGTGATCTGAACACGA+TGG + chr4.2:1708842-1708861 None:intergenic 45.0%
ATCCAGCTTTGCATCCAATG+TGG + chr4.2:1713087-1713106 None:intergenic 45.0%
ATCGTCGTTGTAAACGCCAT+CGG + chr4.2:1708544-1708563 None:intergenic 45.0%
ATGGCACAACCTTATTGGCA+TGG + chr4.2:1712667-1712686 None:intergenic 45.0%
ATTCTTGGGGATAACCCGTT+GGG - chr4.2:1712971-1712990 MS.gene015691:CDS 45.0%
ATTGTCTTGCATTCCCCGTT+AGG - chr4.2:1710641-1710660 MS.gene015691:intron 45.0%
CAACAGTTGTGGTCCGATAA+AGG + chr4.2:1708712-1708731 None:intergenic 45.0%
CAACCTTATTGGCATGGCTT+AGG + chr4.2:1712661-1712680 None:intergenic 45.0%
CACATGCATAGTGCAGTACT+GGG + chr4.2:1711680-1711699 None:intergenic 45.0%
CAGCTCCAACCAAGACATTT+GGG + chr4.2:1713138-1713157 None:intergenic 45.0%
CCTAACCCAAATGTCTTGGT+TGG - chr4.2:1713130-1713149 MS.gene015691:CDS 45.0%
CGATATGGAGGCAAAGAGTT+TGG + chr4.2:1711578-1711597 None:intergenic 45.0%
CGCGTTGAAATCAGTGAGAT+GGG - chr4.2:1708618-1708637 MS.gene015691:intron 45.0%
CTCTATGGTGTATCCTCTGT+GGG + chr4.2:1713030-1713049 None:intergenic 45.0%
CTTTATCGGACCACAACTGT+TGG - chr4.2:1708710-1708729 MS.gene015691:intron 45.0%
GAAATCAGTGAGATGGGGAA+CGG - chr4.2:1708624-1708643 MS.gene015691:intron 45.0%
GAGAGAGAGAGAAGATTGCA+TGG + chr4.2:1708926-1708945 None:intergenic 45.0%
GATAGAAAGGCCTGGAATCA+GGG + chr4.2:1713195-1713214 None:intergenic 45.0%
GCACAAGTTCAATATTCCCC+AGG - chr4.2:1712221-1712240 MS.gene015691:intron 45.0%
GCGACGTCAAATATAGGTTC+CGG - chr4.2:1708661-1708680 MS.gene015691:intron 45.0%
GCGTTGAAATCAGTGAGATG+GGG - chr4.2:1708619-1708638 MS.gene015691:intron 45.0%
GGTCAAATAAATTGGGACGG+AGG - chr4.2:1709635-1709654 MS.gene015691:intron 45.0%
GGTGAGAAAATGACCGTTGA+TGG - chr4.2:1709248-1709267 MS.gene015691:CDS 45.0%
GTAGAAAACTAGCGAAACCG+TGG - chr4.2:1709051-1709070 MS.gene015691:intron 45.0%
GTTACAGAACAGTGACAGCA+AGG + chr4.2:1711853-1711872 None:intergenic 45.0%
TATGGTGAGGACGTGAAATG+TGG + chr4.2:1708231-1708250 None:intergenic 45.0%
TCCAGCTTTGCATCCAATGT+GGG + chr4.2:1713086-1713105 None:intergenic 45.0%
TGATAGAAAGGCCTGGAATC+AGG + chr4.2:1713196-1713215 None:intergenic 45.0%
TGTGCAACTGTGCATATGCA+TGG - chr4.2:1711175-1711194 MS.gene015691:intron 45.0%
TTCTGTTAGGTCAGAGACAC+GGG - chr4.2:1712006-1712025 MS.gene015691:intron 45.0%
TTGGGAATGTCCTACATGGT+TGG - chr4.2:1712989-1713008 MS.gene015691:intron 45.0%
! CATAAAGTTCGGGTTTCCGA+TGG - chr4.2:1708525-1708544 MS.gene015691:intron 45.0%
! CCAACCAAGACATTTGGGTT+AGG + chr4.2:1713133-1713152 None:intergenic 45.0%
! GAGAAAATGACCGTTGATGG+TGG - chr4.2:1709251-1709270 MS.gene015691:CDS 45.0%
! TTGTTTCAGGTGGACTTGAC+CGG - chr4.2:1708478-1708497 MS.gene015691:CDS 45.0%
!! CTTGTGCAGGAGGTGTTAAT+GGG - chr4.2:1712122-1712141 MS.gene015691:CDS 45.0%
!! GCAAGGCTTTTGAGTAATGC+AGG + chr4.2:1712710-1712729 None:intergenic 45.0%
!! TCTTGTGCAGGAGGTGTTAA+TGG - chr4.2:1712121-1712140 MS.gene015691:CDS 45.0%
!!! AACGAGGTTGTTTTGAGAGC+TGG - chr4.2:1710080-1710099 MS.gene015691:intron 45.0%
!! AAGAAAAATATATAAATAAA+GGG + chr4.2:1709592-1709611 None:intergenic 5.0%
!! TAAGAAAAATATATAAATAA+AGG + chr4.2:1709593-1709612 None:intergenic 5.0%
!! TATTAAAAAAAAATTAAATC+AGG - chr4.2:1711062-1711081 MS.gene015691:intron 5.0%
AAGAGTTTGGCCACCCAGTT+TGG + chr4.2:1711565-1711584 None:intergenic 50.0%
AAGATCGATGAGTCCCATCC+AGG - chr4.2:1708772-1708791 MS.gene015691:CDS 50.0%
AATGAAGCTGACCTGGCGTT+TGG + chr4.2:1712732-1712751 None:intergenic 50.0%
ACCCATGTGTCCATGACCAA+AGG - chr4.2:1712350-1712369 MS.gene015691:intron 50.0%
ACGGTGAAATGAAGCTGACC+TGG + chr4.2:1712739-1712758 None:intergenic 50.0%
AGACTGCTGATAGAAAGGCC+TGG + chr4.2:1713203-1713222 None:intergenic 50.0%
AGTAAAATGGGCACACTGCC+CGG + chr4.2:1709342-1709361 None:intergenic 50.0%
ATACAGTAACAGCCTACGCC+GGG - chr4.2:1709321-1709340 MS.gene015691:CDS 50.0%
ATCGTGATAGTCATGACCGG+CGG + chr4.2:1708279-1708298 None:intergenic 50.0%
ATGAAAGCGACGCACCGTAA+CGG + chr4.2:1708896-1708915 None:intergenic 50.0%
ATGGCTTAGGCCTTTGGTCA+TGG + chr4.2:1712363-1712382 None:intergenic 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + chr4.2:1709440-1709459 None:intergenic 50.0%
ATGGTAAACGCTACCCACAG+AGG - chr4.2:1713014-1713033 MS.gene015691:intron 50.0%
CACACACTCACCACCATCAA+CGG + chr4.2:1709264-1709283 None:intergenic 50.0%
CACAGACAGACCACGTGATA+AGG + chr4.2:1710729-1710748 None:intergenic 50.0%
CAGATTCGTTCCCTGATTCC+AGG - chr4.2:1713182-1713201 MS.gene015691:CDS 50.0%
CATACAGTAACAGCCTACGC+CGG - chr4.2:1709320-1709339 MS.gene015691:CDS 50.0%
CATTCTTGGGGATAACCCGT+TGG - chr4.2:1712970-1712989 MS.gene015691:CDS 50.0%
CCACAGAGGATACACCATAG+AGG - chr4.2:1713028-1713047 MS.gene015691:intron 50.0%
CCATGTAGGACATTCCCAAC+GGG + chr4.2:1712988-1713007 None:intergenic 50.0%
CCCATTCCAAGCACTTTACC+GGG - chr4.2:1709113-1709132 MS.gene015691:intron 50.0%
CCCGAACTTTATGTTGTCGC+CGG + chr4.2:1708518-1708537 None:intergenic 50.0%
CCGGCGACAACATAAAGTTC+GGG - chr4.2:1708515-1708534 MS.gene015691:intron 50.0%
CCTCTATGGTGTATCCTCTG+TGG + chr4.2:1713031-1713050 None:intergenic 50.0%
CTATTGTTCGGAGCAAGAGG+AGG + chr4.2:1708256-1708275 None:intergenic 50.0%
GAACAGTGACAGCAAGGGAA+AGG + chr4.2:1711847-1711866 None:intergenic 50.0%
GACTTGAACAAACACCACGC+CGG + chr4.2:1708683-1708702 None:intergenic 50.0%
GCACATGCATAGTGCAGTAC+TGG + chr4.2:1711681-1711700 None:intergenic 50.0%
GCCAATAAGGTTGTGCCATG+TGG - chr4.2:1712668-1712687 MS.gene015691:CDS 50.0%
GCCCATTCCAAGCACTTTAC+CGG - chr4.2:1709112-1709131 MS.gene015691:intron 50.0%
GCCGGCGACAACATAAAGTT+CGG - chr4.2:1708514-1708533 MS.gene015691:intron 50.0%
GCCTTTGGTCATGGACACAT+GGG + chr4.2:1712354-1712373 None:intergenic 50.0%
GGCGTGGTGTTTGTTCAAGT+CGG - chr4.2:1708682-1708701 MS.gene015691:intron 50.0%
GGCTCAGACTGCTGATAGAA+AGG + chr4.2:1713208-1713227 None:intergenic 50.0%
GTCAAATATAGGTTCCGGCG+TGG - chr4.2:1708666-1708685 MS.gene015691:intron 50.0%
GTCTTGGTTGGAGCTGTAGT+TGG - chr4.2:1713142-1713161 MS.gene015691:CDS 50.0%
GTTGGGACAACAAGCATGCT+GGG - chr4.2:1710123-1710142 MS.gene015691:intron 50.0%
TCTGAACACGATGGAAGCAG+CGG + chr4.2:1708833-1708852 None:intergenic 50.0%
TCTGTATAGACGTCTACGCG+AGG + chr4.2:1710045-1710064 None:intergenic 50.0%
TGAAATGAGGCTTACTCCGG+CGG + chr4.2:1708408-1708427 None:intergenic 50.0%
TGGTTGGAGCTGTAGTTGGT+GGG - chr4.2:1713146-1713165 MS.gene015691:CDS 50.0%
TTCAACGCGTTACCTAGCTC+AGG + chr4.2:1708607-1708626 None:intergenic 50.0%
TTGGGAGAGACCGGAAGATA+TGG - chr4.2:1708729-1708748 MS.gene015691:intron 50.0%
TTGGTTGGAGCTGTAGTTGG+TGG - chr4.2:1713145-1713164 MS.gene015691:CDS 50.0%
! AGAGTAATGGGACCTGAGCT+AGG - chr4.2:1708592-1708611 MS.gene015691:intron 50.0%
! ATGCATAGTGCAGTACTGGG+TGG + chr4.2:1711677-1711696 None:intergenic 50.0%
! ATGGTGGTGAGTGTGTGTTC+AGG - chr4.2:1709267-1709286 MS.gene015691:CDS 50.0%
! CCCGGTAAAGTGCTTGGAAT+GGG + chr4.2:1709116-1709135 None:intergenic 50.0%
! GCTTCTCAATCGTGCCGTTA+CGG - chr4.2:1708879-1708898 MS.gene015691:CDS 50.0%
! TCCCGGTAAAGTGCTTGGAA+TGG + chr4.2:1709117-1709136 None:intergenic 50.0%
! TGCATAGTGCAGTACTGGGT+GGG + chr4.2:1711676-1711695 None:intergenic 50.0%
! TTCTTTGAAGGGCAACGCTC+TGG - chr4.2:1708320-1708339 MS.gene015691:CDS 50.0%
!! CGGAAGGAGTACCATCAAAG+AGG + chr4.2:1709420-1709439 None:intergenic 50.0%
!! CGGAGGGAGTACTATTCAGT+AGG - chr4.2:1709652-1709671 MS.gene015691:intron 50.0%
!! GAGTTTGCTGACAGACATCG+TGG - chr4.2:1709295-1709314 MS.gene015691:CDS 50.0%
!! GCTTTTGAGTAATGCAGGGG+TGG + chr4.2:1712705-1712724 None:intergenic 50.0%
AAAGCGAGCAGACCCACAAG+TGG + chr4.2:1713250-1713269 None:intergenic 55.0%
AGTGGAGACGCTGATCAGAC+GGG + chr4.2:1708352-1708371 None:intergenic 55.0%
CAAAAGCCTTGCCAAACGCC+AGG - chr4.2:1712718-1712737 MS.gene015691:CDS 55.0%
CAGTGGAGACGCTGATCAGA+CGG + chr4.2:1708353-1708372 None:intergenic 55.0%
CATGACCGGCGGCTATTGTT+CGG + chr4.2:1708268-1708287 None:intergenic 55.0%
CCACAACTGTTGGGAGAGAC+CGG - chr4.2:1708720-1708739 MS.gene015691:intron 55.0%
CCCGTTGGGAATGTCCTACA+TGG - chr4.2:1712985-1713004 MS.gene015691:intron 55.0%
CGGCTATTGTTCGGAGCAAG+AGG + chr4.2:1708259-1708278 None:intergenic 55.0%
CGTCGTGAACTCCAGAGTCA+CGG + chr4.2:1708379-1708398 None:intergenic 55.0%
GCATTCCCCGTTAGGCATGT+GGG - chr4.2:1710649-1710668 MS.gene015691:intron 55.0%
GCCCACATTGGATGCAAAGC+TGG - chr4.2:1713082-1713101 MS.gene015691:CDS 55.0%
GCTTTGCATCCAATGTGGGC+TGG + chr4.2:1713082-1713101 None:intergenic 55.0%
GGCCTTTGGTCATGGACACA+TGG + chr4.2:1712355-1712374 None:intergenic 55.0%
GGGCTTATCTTCAAGGCTGG+TGG - chr4.2:1712578-1712597 MS.gene015691:intron 55.0%
GGTTGGGACAACAAGCATGC+TGG - chr4.2:1710122-1710141 MS.gene015691:intron 55.0%
GTCAGTTATTCCGGGACGGA+AGG + chr4.2:1709436-1709455 None:intergenic 55.0%
TCGGAGCAAGAGGAGGAGTA+TGG + chr4.2:1708249-1708268 None:intergenic 55.0%
TGATGGTACTCCTTCCGTCC+CGG - chr4.2:1709423-1709442 MS.gene015691:intron 55.0%
TGCATTCCCCGTTAGGCATG+TGG - chr4.2:1710648-1710667 MS.gene015691:intron 55.0%
TTGCTCCGAACAATAGCCGC+CGG - chr4.2:1708260-1708279 MS.gene015691:CDS 55.0%
! GCAAGAGGAGGAGTATGGTG+AGG + chr4.2:1708244-1708263 None:intergenic 55.0%
! GGTGGGCTTATCTTCAAGGC+TGG - chr4.2:1712575-1712594 MS.gene015691:intron 55.0%
! TTTCAGGTGGACTTGACCGG+AGG - chr4.2:1708481-1708500 MS.gene015691:CDS 55.0%
!! CGTGACTCTGGAGTTCACGA+CGG - chr4.2:1708377-1708396 MS.gene015691:CDS 55.0%
!! GCATCCAATGTGGGCTGGAT+GGG + chr4.2:1713077-1713096 None:intergenic 55.0%
!! GCTGGATGGGCTGAAACTGA+GGG + chr4.2:1713064-1713083 None:intergenic 55.0%
!! TGCATCCAATGTGGGCTGGA+TGG + chr4.2:1713078-1713097 None:intergenic 55.0%
AATGAGGCTTACTCCGGCGG+TGG + chr4.2:1708405-1708424 None:intergenic 60.0%
ACCGGAGGTTACTACGACGC+CGG - chr4.2:1708496-1708515 MS.gene015691:CDS 60.0%
AGCTGACCTGGCGTTTGGCA+AGG + chr4.2:1712727-1712746 None:intergenic 60.0%
CCGGTCTCTCCCAACAGTTG+TGG + chr4.2:1708723-1708742 None:intergenic 60.0%
CGTCTGATCAGCGTCTCCAC+TGG - chr4.2:1708351-1708370 MS.gene015691:CDS 60.0%
CTGCGCACCCACATGCCTAA+CGG + chr4.2:1710659-1710678 None:intergenic 60.0%
GAGTAATGCAGGGGTGGCAG+TGG + chr4.2:1712699-1712718 None:intergenic 60.0%
TCAGCCCATCCAGCCCACAT+TGG - chr4.2:1713070-1713089 MS.gene015691:intron 60.0%
TGCCACGTCGGATCCTGGAT+GGG + chr4.2:1708788-1708807 None:intergenic 60.0%
TGCGCACCCACATGCCTAAC+GGG + chr4.2:1710658-1710677 None:intergenic 60.0%
! AGTTGCTTTGGGCTGCAGCG+TGG - chr4.2:1710009-1710028 MS.gene015691:intron 60.0%
!! GGCTGGATGGGCTGAAACTG+AGG + chr4.2:1713065-1713084 None:intergenic 60.0%
!! GTGGCAGTGGTGTCACCACA+TGG + chr4.2:1712686-1712705 None:intergenic 60.0%
CATCCAGGATCCGACGTGGC+AGG - chr4.2:1708787-1708806 MS.gene015691:CDS 65.0%
CTGCCACGTCGGATCCTGGA+TGG + chr4.2:1708789-1708808 None:intergenic 65.0%
GCCGGCGTCGTAGTAACCTC+CGG + chr4.2:1708500-1708519 None:intergenic 65.0%
GCGCACCCACATGCCTAACG+GGG + chr4.2:1710657-1710676 None:intergenic 65.0%
GGAAGCAGCGGCAAGTGCAG+CGG + chr4.2:1708821-1708840 None:intergenic 65.0%
GGCGGTTTCACCTGCCACGT+CGG + chr4.2:1708800-1708819 None:intergenic 65.0%
GGCTGCAGCGTGGTTGCACA+AGG - chr4.2:1710019-1710038 MS.gene015691:intron 65.0%
GTCCCATCCAGGATCCGACG+TGG - chr4.2:1708783-1708802 MS.gene015691:CDS 65.0%
TCACCTGCCACGTCGGATCC+TGG + chr4.2:1708793-1708812 None:intergenic 65.0%
AGCAGCGGCAAGTGCAGCGG+CGG + chr4.2:1708818-1708837 None:intergenic 70.0%
ATGGGCACACTGCCCGGCGT+AGG + chr4.2:1709336-1709355 None:intergenic 70.0%
CTCCACTGGCGCCGTGACTC+TGG - chr4.2:1708365-1708384 MS.gene015691:CDS 70.0%
CTCCAGAGTCACGGCGCCAG+TGG + chr4.2:1708370-1708389 None:intergenic 70.0%
!! GTTCACGACGGTGCCACCGC+CGG - chr4.2:1708389-1708408 MS.gene015691:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 1708200 1713288 1708200 ID=MS.gene015691
chr4.2 mRNA 1708200 1713288 1708200 ID=MS.gene015691.t1;Parent=MS.gene015691
chr4.2 exon 1713076 1713288 1713076 ID=MS.gene015691.t1.exon1;Parent=MS.gene015691.t1
chr4.2 CDS 1713076 1713288 1713076 ID=cds.MS.gene015691.t1;Parent=MS.gene015691.t1
chr4.2 exon 1712588 1713001 1712588 ID=MS.gene015691.t1.exon2;Parent=MS.gene015691.t1
chr4.2 CDS 1712588 1713001 1712588 ID=cds.MS.gene015691.t1;Parent=MS.gene015691.t1
chr4.2 exon 1712107 1712199 1712107 ID=MS.gene015691.t1.exon3;Parent=MS.gene015691.t1
chr4.2 CDS 1712107 1712199 1712107 ID=cds.MS.gene015691.t1;Parent=MS.gene015691.t1
chr4.2 exon 1711322 1711483 1711322 ID=MS.gene015691.t1.exon4;Parent=MS.gene015691.t1
chr4.2 CDS 1711322 1711483 1711322 ID=cds.MS.gene015691.t1;Parent=MS.gene015691.t1
chr4.2 exon 1709246 1709357 1709246 ID=MS.gene015691.t1.exon5;Parent=MS.gene015691.t1
chr4.2 CDS 1709246 1709357 1709246 ID=cds.MS.gene015691.t1;Parent=MS.gene015691.t1
chr4.2 exon 1708749 1708912 1708749 ID=MS.gene015691.t1.exon6;Parent=MS.gene015691.t1
chr4.2 CDS 1708749 1708912 1708749 ID=cds.MS.gene015691.t1;Parent=MS.gene015691.t1
chr4.2 exon 1708200 1708526 1708200 ID=MS.gene015691.t1.exon7;Parent=MS.gene015691.t1
chr4.2 CDS 1708200 1708526 1708200 ID=cds.MS.gene015691.t1;Parent=MS.gene015691.t1
Gene Sequence

>MS.gene015691

ATGGCGCGAAATGCATTATACTCTATCACCACATTTCACGTCCTCACCATACTCCTCCTCTTGCTCCGAACAATAGCCGCCGGTCATGACTATCACGATGCTCTCCGTAAGAGCATTCTCTTCTTTGAAGGGCAACGCTCTGGCAAACTCCCGTCTGATCAGCGTCTCCACTGGCGCCGTGACTCTGGAGTTCACGACGGTGCCACCGCCGGAGTAAGCCTCATTTCACATAGTGCTCTGTTTTGACCTACATTGCTTTGTTTTTTAATTTGTTGTGGTTGTTTCAGGTGGACTTGACCGGAGGTTACTACGACGCCGGCGACAACATAAAGTTCGGGTTTCCGATGGCGTTTACAACGACGATGTTAGCTTGGAGTGTGATTGATTTTGGAAGAGTAATGGGACCTGAGCTAGGTAACGCGTTGAAATCAGTGAGATGGGGAACGGACTATCTTTTAAAGGCGACGTCAAATATAGGTTCCGGCGTGGTGTTTGTTCAAGTCGGTGATCCTTTATCGGACCACAACTGTTGGGAGAGACCGGAAGATATGGATACGTTACGCACAGTTTACAAGATCGATGAGTCCCATCCAGGATCCGACGTGGCAGGTGAAACCGCCGCTGCACTTGCCGCTGCTTCCATCGTGTTCAGATCACGTGATCCTGCTTACTCTAAATTGCTTCTCAATCGTGCCGTTACGGTGCGTCGCTTTCATTCCCATTCCATGCAATCTTCTCTCTCTCTCTCTTTCACTATCCTTTCTTTTCTTCATTTTTTTAATTATTTATTATTATTTTTATGAATGATGAAAAACTAAAAAAAGCAATTTTGTTTGGCTTTAAATTGAAAAGTAGAAAACTAGCGAAACCGTGGTAAATTTGAAAAGTGGTTTGTGAAATCACTTTTTTTGTGCCCATTCCAAGCACTTTACCGGGAATTTAATTTCACTTTTTACTTTTACTACTACGACTTTTTTTTTCTGTTATGAATCACGGAGTTAGTTGGTACATTTATTTATGCATTTAATAAAATTTTCCGTTAAGATATGGTGAGAAAATGACCGTTGATGGTGGTGAGTGTGTGTTCAGGTGTTTGAGTTTGCTGACAGACATCGTGGTGCATACAGTAACAGCCTACGCCGGGCAGTGTGCCCATTTTACTGTGATGTAAACGGTTATCAGGTACTGTATCTTGAGAGTAACATAACAGAACAATACCTCTTTGATGGTACTCCTTCCGTCCCGGAATAACTGACCCATTTTCTAAAAAAAAGTGTCCCAAAATAACTGACCCATTTCAATTTTCAATACAACTTTCATCATTCCCAATACAATATAACACTAAATAATACTACTTTTATCATTCCCAATACACTATATTCCACTTTCCCCTTTATTTATATATTTTTCTTAATCTGTGTGAAATGAGTCAATGGGTCAAATAAATTGGGACGGAGGGAGTACTATTCAGTAGGAGTATTTAATACTTGAGGAATGATATTTTAAAAACTAATTTTCAATAACTTTTGTGACAACTCTCTTTCATACTCTCATTACATACCTTTATTTTCTCTCTTCCTTTTTCTCTCTCTATTGTTATTGTCCAATAATAATGGAGGAAAAAGGTTGTCCTTAAAAAGTTGTTGAAAATTGGATGTCAAAATATCATTCCTCTTAATACTTACTGTATTACTTTTTTTCTCTCTCTAAGATTAGTAGTATTTGGTTTGTTATAATCATCACAATAAAAATATGTTTAATTTTTAATTTAATTTAATTAATTGGAAAATCACTTGTGGTTTTAGGATGAGTTGCTTTGGGCTGCAGCGTGGTTGCACAAGGCCTCGCGTAGACGTCTATACAGAGAATACATTATTCGTAACGAGGTTGTTTTGAGAGCTGGTGACACCATTAATGAGTTTGGTTGGGACAACAAGCATGCTGGGATTAATGTCCTCATTTCTAAGGTACATTCATTTTAGCAAGATCCTCCCTGTTAATTTCATTGAAGCAGCAATACTAAGTACTACAGTATTTTAGGAAATGTCATTTAATGTTATTATTTACTCCCTCCGTTCCTTTTTAAGTGTCACTTTTGAAGAATTTTTTTGTTCCTATTTAAGTGTCACTTTACATAGTTCAATGCAACATTAAATGTTATTTTACTAATATTACCCTTATTTATTATTGTGGAGGGAGAAATATATGTAATGAGATATTAAATAAATAAGGTTATTATAATAAAAATAGAAATTATTGTATCAAAAGTAACAATATTTATTGATTGTCTTGGTTTGTGTAAAATGTCAAAATGTGACAATTAAAAAGGAACGGAGGTAGTAATTGAAGTGTGTTATTTTAATATGTTATCATTTGTTACTAGTATGTGTGTGGGTACTTATCGAAGTTTAGTTTGTCTTGTATGTGTTGTTTTTGTTCCTATTGTCTTGCATTCCCCGTTAGGCATGTGGGTGCGCAGTGTGATAGAATTGCTCATTATATTCATCCAATCTAGTGATAAAGTTCCCTTATCACGTGGTCTGTCTGTGCAATGTGATGCACTTTCTCCAATTAGGACTCTATTATTCCTATTGGTCCATTCCCAATATGCATACATTAATCATATACTAGTATAATCATATACTCAACACCACAAGCAAAACACCAAAACAGAGCACTTCACTTAATACTACCATTAATTATTTTCACACCACATGCATTGTGTTTCTTCTGTAAAATGTTTTTTGCTGAAAGTATGAAGTATATGAATCCTTATCTTAAACTTGATTAGATAAAAAAGTAATCCGCTTATAGTAAACCGGTTATATTAAATAAACTAAAACATGTTCAATTATGTCTTTCTATTAAAAAAAAATTAAATCAGGTTCAATAATGTAATAGAGAATAAAGTATTTTTAATTTGACTTTATCTAATTGGTGGGTCACATGGAATCTATGACACGATGAAGAGGTTGTGTGCAACTGTGCATATGCATGGTACAACAAGAAAGGGAATGTTTATGTGAGTACAGATTGGATTTATTTGTTTTAATTTTAGAAAAAGCTTTATCCGTTTGGTGATTGGTATTGAAAGTCAAGATAGCAATGAGAAAAGGGGAGTGTGAAATGCTGATAATTGAATTTGCACATGATGAGAATTTCATTTTTAAGTTTCATGTGGGCACCGTTTTTGTTTATTATTCAAGCAAGACATTCCGTGATAATTGGAACTTTGGATCTAAATTGTCTATGCTTATACCATTGAATTTATTTATGAGATTGATTGATATCAAGGGGCAAATTTGTCTTTAAAACTTGTAGGACTAGAATTTGGGTGGAATGTATTGTCGCTTTAATCTGAACCAAACTGGGTGGCCAAACTCTTTGCCTCCATATCGTAAACATTTGGAACAAAAAGTCTCACCCCTTAATTAGTTTCATTTAATTTTTTTTAGTTCTGGAAATGGATGGTTCCCACCCAGTACTGCACTATGCATGTGCTCCTCACCATTATTTTCTGCACAATTTCACTTTCTATCAGGGATAGAGTACTCTGTGACTTCCTTTTTTAAGCCCCCATCAACATCATATTTCTTGCATCCTTTTCTTGTAACACACCATTGTGGTAACTTTTTTTTAATCAACCTTTCCCTTGCTGTCACTGTTCTGTAACTGTGAAATTTATACATGCATTGTACAGTACATTTTACACATACTACTAGTACATTATACTGTACTCTTTAAGAAAAGCAAATACTAGAAAAATGTTACTATCTATCCAAAAAGTCATTGGGTTTTGTACGGGATTCTGTTAGGTCAGAGACACGGGTTCAGCTCATACACAACATTATATACTACTCCGACTATTAACCTGTGCAATATAAAATAAAAAGCCATGAATAAAATATGAATATTATTTTATCTTGTGCAGGAGGTGTTAATGGGAAGAGCAAATTATTTTTCTTCGTTCAAACGAAATGCAGATGAATTTATTTGTTCAACATTGCCTGGATTTTCTCACGCACAAGTTCAATATTCCCCAGGTATATATATTCCCTCATTGTGTTTTGTTTTGCCCATTTATTTTTGACTTTTGAGAAAGGTGATTCTCCGTGATTATAGCATTTAAATAATGAATATGATTAATGAGACCCATGTGTCCATGACCAAAGGCCTAAGCCATCATTAATGTTTTTTCTTTTTGCAAGGAAAAGCCTTAGATTGAGTGTTTGTATGTATAACTACAATGTTCTCCCTATTTAGTATTGTGCACAGTTATTATTGCATAGACGGCAATATTGGTAGCCACAGTGTTTGTTTGTTTCTTTCCTAAATAACTCAAACTTCCTCTTTTGTTGGTTAACAATGTAAAAAAGGTGGGCTTATCTTCAAGGCTGGTGGAAGTAACATGCAACATGTAACGTCCTTGTCCTTCCTGTTACTAGCTTATTCCAATTACCTAAGCCATGCCAATAAGGTTGTGCCATGTGGTGACACCACTGCCACCCCTGCATTACTCAAAAGCCTTGCCAAACGCCAGGTCAGCTTCATTTCACCGTTGATTAATTCTTTGGGACCAATTTCTTGTTTTCAACATCAGACAAAACTAACGGCTAGATTTTTTGTCTTTATGACATTGAACTCATTGAAGTAAAATAAAATGACATCAACACGTGATATATACACAAAGTTGGTAACGTTACTCTAATAATTCACACTACATGTGAATGTACATGCTAACGTTGCTTTCATTTACTACTAGGTTAACTACATTCTTGGGGATAACCCGTTGGGAATGTCCTACATGGTTGGTTATGGTAAACGCTACCCACAGAGGATACACCATAGAGGAAGCTCAATTCCCTCAGTTTCAGCCCATCCAGCCCACATTGGATGCAAAGCTGGATCTCAATATTTCTTCAGCCCAAACCCTAACCCAAATGTCTTGGTTGGAGCTGTAGTTGGTGGGCCTACCAACACTACAGATTCGTTCCCTGATTCCAGGCCTTTCTATCAGCAGTCTGAGCCCACGACATATATCAATGCACCACTTGTGGGTCTGCTCGCTTTCTTTTCAGCTCATCCTTGA
Protein sequence

>MS.gene015691.t1

MARNALYSITTFHVLTILLLLLRTIAAGHDYHDALRKSILFFEGQRSGKLPSDQRLHWRRDSGVHDGATAGVDLTGGYYDAGDNIKFGFPMAFTTTMLAWSVIDFGRVMGPELGNALKSVRWGTDYLLKATSNIGSGVVFVQVGDPLSDHNCWERPEDMDTLRTVYKIDESHPGSDVAGETAAALAAASIVFRSRDPAYSKLLLNRAVTVFEFADRHRGAYSNSLRRAVCPFYCDVNGYQDELLWAAAWLHKASRRRLYREYIIRNEVVLRAGDTINEFGWDNKHAGINVLISKEVLMGRANYFSSFKRNADEFICSTLPGFSHAQVQYSPGGLIFKAGGSNMQHVTSLSFLLLAYSNYLSHANKVVPCGDTTATPALLKSLAKRQVNYILGDNPLGMSYMVGYGKRYPQRIHHRGSSIPSVSAHPAHIGCKAGSQYFFSPNPNPNVLVGAVVGGPTNTTDSFPDSRPFYQQSEPTTYINAPLVGLLAFFSAHP