AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene020485

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020485.t1 MTR_8g104820 98.785 494 6 0 1 494 1 494 0.0 1010
MS.gene020485.t1 MTR_3g117500 62.025 474 173 5 23 493 18 487 0.0 602
MS.gene020485.t1 MTR_4g035930 59.267 464 181 4 30 493 15 470 0.0 565
MS.gene020485.t1 MTR_4g035955 58.281 477 191 4 17 493 1 469 0.0 564
MS.gene020485.t1 MTR_3g080810 58.280 465 192 2 29 493 34 496 0.0 553
MS.gene020485.t1 MTR_4g035975 58.333 492 186 8 14 494 10 493 0.0 548
MS.gene020485.t1 MTR_1g088190 60.086 466 163 4 27 491 36 479 0.0 546
MS.gene020485.t1 MTR_3g010330 55.484 465 200 4 30 493 25 483 4.61e-180 514
MS.gene020485.t1 MTR_8g099410 50.105 475 224 8 26 492 24 493 6.20e-161 466
MS.gene020485.t1 MTR_8g099410 50.105 475 224 8 26 492 24 493 7.01e-160 468
MS.gene020485.t1 MTR_5g009970 47.925 482 231 10 14 488 23 491 7.63e-158 458
MS.gene020485.t1 MTR_5g010000 50.214 468 215 9 26 488 36 490 1.21e-157 457
MS.gene020485.t1 MTR_3g080190 48.560 486 237 8 14 490 24 505 2.27e-155 452
MS.gene020485.t1 MTR_5g085730 45.885 486 250 8 14 490 15 496 4.93e-151 441
MS.gene020485.t1 MTR_4g074960 49.787 470 222 9 28 488 26 490 1.73e-146 433
MS.gene020485.t1 MTR_1g037340 48.185 496 233 10 5 491 2 482 8.86e-143 419
MS.gene020485.t1 MTR_5g093590 44.289 499 261 10 1 488 6 498 1.27e-142 419
MS.gene020485.t1 MTR_3g105230 44.934 454 233 8 30 480 30 469 2.40e-139 410
MS.gene020485.t1 MTR_3g023740 44.606 482 246 10 14 488 10 477 1.42e-136 403
MS.gene020485.t1 MTR_5g009970 47.156 422 205 9 72 488 9 417 1.06e-134 396
MS.gene020485.t1 MTR_5g009970 45.658 403 201 9 91 488 1 390 4.06e-122 363
MS.gene020485.t1 MTR_3g113720 41.545 479 249 10 26 488 53 516 1.25e-112 343
MS.gene020485.t1 MTR_1g088190 57.929 309 108 3 27 334 36 323 3.26e-112 335
MS.gene020485.t1 MTR_8g075990 41.578 469 253 10 31 488 64 522 1.00e-108 333
MS.gene020485.t1 MTR_5g009970 46.988 332 164 6 159 488 1 322 1.29e-99 303
MS.gene020485.t1 MTR_2g028480 39.306 519 260 18 14 492 88 591 1.98e-89 286
MS.gene020485.t1 MTR_3g082440 36.914 512 273 18 12 487 91 588 3.35e-84 272
MS.gene020485.t1 MTR_3g090540 33.588 524 281 19 9 487 79 580 6.42e-81 263
MS.gene020485.t1 MTR_7g108925 62.658 158 58 1 334 491 43 199 5.23e-64 207
MS.gene020485.t1 MTR_0393s0050 55.862 145 62 2 334 477 20 163 1.51e-46 160
MS.gene020485.t1 MTR_1g037320 48.780 164 78 3 91 252 1 160 1.02e-34 132
MS.gene020485.t1 MTR_1g037320 51.613 124 57 2 366 488 168 289 1.76e-31 123
MS.gene020485.t1 MTR_4g128810 39.333 150 82 4 341 487 187 330 7.06e-24 103
MS.gene020485.t1 MTR_7g108920 41.935 93 53 1 240 332 86 177 1.47e-14 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020485.t1 AT1G70710 79.310 493 97 3 1 493 1 488 0.0 813
MS.gene020485.t1 AT1G23210 76.181 487 113 2 7 493 5 488 0.0 783
MS.gene020485.t1 AT4G02290 62.366 465 172 2 27 491 49 510 0.0 588
MS.gene020485.t1 AT4G39010 59.701 469 184 4 29 494 28 494 0.0 585
MS.gene020485.t1 AT1G02800 61.987 463 171 3 29 491 42 499 0.0 569
MS.gene020485.t1 AT4G39000 54.449 472 210 4 26 494 21 490 0.0 525
MS.gene020485.t1 AT4G38990 54.806 489 208 8 15 494 9 493 1.53e-180 515
MS.gene020485.t1 AT1G22880 53.846 481 216 3 12 492 6 480 6.34e-180 513
MS.gene020485.t1 AT1G71380 53.015 481 220 3 12 492 6 480 5.19e-178 508
MS.gene020485.t1 AT4G02290 59.850 401 158 2 91 491 1 398 4.95e-169 483
MS.gene020485.t1 AT1G64390 51.688 474 216 8 27 492 22 490 6.88e-162 473
MS.gene020485.t1 AT4G11050 50.851 470 218 8 27 488 23 487 1.30e-159 464
MS.gene020485.t1 AT4G11050 50.851 470 218 8 27 488 23 487 2.37e-159 466
MS.gene020485.t1 AT4G11050 50.851 470 218 8 27 488 23 487 3.29e-159 466
MS.gene020485.t1 AT4G09740 50.418 478 222 7 14 488 7 472 4.22e-158 457
MS.gene020485.t1 AT4G23560 50.209 478 222 8 14 488 8 472 6.89e-158 457
MS.gene020485.t1 AT4G39010 58.127 363 148 3 29 388 28 389 1.02e-154 446
MS.gene020485.t1 AT2G32990 46.976 496 233 10 17 488 13 502 1.08e-148 436
MS.gene020485.t1 AT1G22880 52.488 402 185 3 91 492 1 396 8.82e-147 426
MS.gene020485.t1 AT2G44550 47.119 486 240 10 10 489 14 488 2.30e-138 408
MS.gene020485.t1 AT3G43860 46.352 466 233 8 30 492 34 485 3.98e-136 402
MS.gene020485.t1 AT3G43860 46.352 466 233 8 30 492 34 485 3.98e-136 402
MS.gene020485.t1 AT2G44540 46.778 481 241 9 14 488 17 488 1.59e-135 400
MS.gene020485.t1 AT1G48930 48.291 468 229 8 29 488 29 491 6.41e-134 401
MS.gene020485.t1 AT2G44570 47.551 490 234 13 11 488 11 489 2.34e-133 395
MS.gene020485.t1 AT2G44560 46.939 490 243 10 7 488 8 488 3.22e-130 387
MS.gene020485.t1 AT1G19940 42.333 463 250 8 30 485 48 500 9.87e-118 356
MS.gene020485.t1 AT1G19940 42.333 463 250 8 30 485 48 500 9.87e-118 356
MS.gene020485.t1 AT1G22880 55.108 323 140 2 12 334 6 323 1.82e-114 341
MS.gene020485.t1 AT1G75680 43.413 463 245 9 26 481 53 505 2.12e-113 345
MS.gene020485.t1 AT4G38990 50.964 363 151 5 15 376 9 345 3.00e-112 336
MS.gene020485.t1 AT2G44570 45.161 403 200 11 11 402 11 403 2.61e-94 292
MS.gene020485.t1 AT1G19940 40.164 366 207 6 30 388 48 408 1.90e-82 262
MS.gene020485.t1 AT5G49720 37.524 517 270 17 16 493 87 589 5.85e-82 266
MS.gene020485.t1 AT4G24260 38.632 497 257 18 30 493 108 589 3.16e-79 259
MS.gene020485.t1 AT1G65610 35.659 516 283 18 12 492 91 592 2.41e-78 257
MS.gene020485.t1 AT4G24260 37.084 391 203 16 30 387 108 488 1.82e-49 177
MS.gene020485.t1 AT4G24260 39.185 319 160 12 30 320 108 420 2.97e-46 167
MS.gene020485.t1 AT3G42153 41.667 96 48 3 241 332 16 107 1.30e-13 67.8

Find 0 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATTTAATTTAATTAAT+TGG + 57579:1807-1826 MS.gene020485:intron 0.0%
!! AAATTAAATGAAACTAATTA+AGG - 57579:3209-3228 None:intergenic 10.0%
!! AATTAAATGAAACTAATTAA+GGG - 57579:3208-3227 None:intergenic 10.0%
!!! TAATATTCATATTTTATTGA+TGG - 57579:3858-3877 None:intergenic 10.0%
!!! TTTAGTTTATTTAATATAAC+CGG - 57579:2601-2620 None:intergenic 10.0%
!! AAAAGAAAAAACATTAATGA+TGG - 57579:4144-4163 None:intergenic 15.0%
!! AATCTCATAAATAAATTCAA+TGG - 57579:3041-3060 None:intergenic 15.0%
!! ATTAAATGAAACTAATTAAG+GGG - 57579:3207-3226 None:intergenic 15.0%
!! TAAAAAAATGAAGAAAAGAA+AGG - 57579:1037-1056 None:intergenic 15.0%
!! TTATTTAAATGCTATAATCA+CGG - 57579:4075-4094 None:intergenic 15.0%
!!! CATTTAATTTTTTTTAGTTC+TGG + 57579:3219-3238 MS.gene020485:intron 15.0%
!!! TTAATTTGACTTTATCTAAT+TGG + 57579:2695-2714 MS.gene020485:intron 15.0%
!! AAAAAGTGAAATTAAATTCC+CGG - 57579:1211-1230 None:intergenic 20.0%
!! ATGATTAATGTATGCATATT+GGG - 57579:2387-2406 None:intergenic 20.0%
!! CTCAAAAGTCAAAAATAAAT+GGG - 57579:4040-4059 None:intergenic 20.0%
!! GCTTGAATAATAAACAAAAA+CGG - 57579:2967-2986 None:intergenic 20.0%
!! TATGATTAATGTATGCATAT+TGG - 57579:2388-2407 None:intergenic 20.0%
!! TCTCAAAAGTCAAAAATAAA+TGG - 57579:4041-4060 None:intergenic 20.0%
!! TTAAAAAAAAGTTACCACAA+TGG - 57579:3586-3605 None:intergenic 20.0%
!!! AATATTATTTTATCTTGTGC+AGG + 57579:3871-3890 MS.gene020485:intron 20.0%
!!! AATTTGTCTTTAAAACTTGT+AGG + 57579:3079-3098 MS.gene020485:intron 20.0%
!!! ATCTAATCAAGTTTAAGATA+AGG - 57579:2553-2572 None:intergenic 20.0%
!!! ATTTTTTTTAGTTCTGGAAA+TGG + 57579:3225-3244 MS.gene020485:intron 20.0%
!!! CAATTTTCAACAACTTTTTA+GGG - 57579:1678-1697 None:intergenic 20.0%
!!! CTAAAAAAAGCAATTTTGTT+TGG + 57579:1091-1110 MS.gene020485:intron 20.0%
!!! TAAAATTTTCCGTTAAGATA+TGG + 57579:1305-1324 MS.gene020485:intron 20.0%
!!! TAATGTTTTTTCTTTTTGCA+AGG + 57579:4148-4167 MS.gene020485:intron 20.0%
!!! TTATTTTTGACTTTTGAGAA+AGG + 57579:4042-4061 MS.gene020485:intron 20.0%
!!! TTCATTTTTAAGTTTCATGT+GGG + 57579:2939-2958 MS.gene020485:intron 20.0%
!!! TTGTTATTGTCCAATAATAA+TGG + 57579:1638-1657 MS.gene020485:intron 20.0%
!!! TTTCATTTTTAAGTTTCATG+TGG + 57579:2938-2957 MS.gene020485:intron 20.0%
!!! TTTTTTATCTTATATTGCAC+AGG - 57579:3834-3853 None:intergenic 20.0%
!!! TTTTTTTCTGTTATGAATCA+CGG + 57579:1251-1270 MS.gene020485:intron 20.0%
! AAAAACATTAATGATGGCTT+AGG - 57579:4138-4157 None:intergenic 25.0%
! ATAACAATAGAGAGAGAAAA+AGG - 57579:1625-1644 None:intergenic 25.0%
! ATGAGATTGATTGATATCAA+GGG + 57579:3053-3072 MS.gene020485:intron 25.0%
! ATTAAAAAACAGAGCAATGT+AGG - 57579:526-545 None:intergenic 25.0%
! ATTAATTGGAAAATCACTTG+TGG + 57579:1821-1840 MS.gene020485:intron 25.0%
! CCTAAAAAGTTGTTGAAAAT+TGG + 57579:1676-1695 MS.gene020485:intron 25.0%
! GTAATACAGTAAGTATTAAG+AGG - 57579:1718-1737 None:intergenic 25.0%
! GTTAACAATGTAAAAAAGGT+GGG + 57579:4320-4339 MS.gene020485:intron 25.0%
! GTTGGTTAACAATGTAAAAA+AGG + 57579:4316-4335 MS.gene020485:intron 25.0%
! TATCTATCCAAAAAGTCATT+GGG + 57579:3732-3751 MS.gene020485:intron 25.0%
! TATGAGATTGATTGATATCA+AGG + 57579:3052-3071 MS.gene020485:intron 25.0%
! TCACAAAAGTTGTTGAAAAT+TGG - 57579:1557-1576 None:intergenic 25.0%
! TGAAATTGTGCAGAAAATAA+TGG - 57579:3291-3310 None:intergenic 25.0%
! TGATGTTGAAAACAAGAAAT+TGG - 57579:4541-4560 None:intergenic 25.0%
! TGTGGTGTGAAAATAATTAA+TGG - 57579:2475-2494 None:intergenic 25.0%
! TTATCTATCCAAAAAGTCAT+TGG + 57579:3731-3750 MS.gene020485:intron 25.0%
! TTATTGTCCAATAATAATGG+AGG + 57579:1641-1660 MS.gene020485:intron 25.0%
!! ACTAAGTACTACAGTATTTT+AGG + 57579:2063-2082 MS.gene020485:intron 25.0%
!! ATTATTTGTTACTATGTGTG+TGG + 57579:2154-2173 MS.gene020485:intron 25.0%
!! ATTTGACTTTATCTAATTGG+TGG + 57579:2698-2717 MS.gene020485:intron 25.0%
!! ATTTTCTCACCATATCTTAA+CGG - 57579:1317-1336 None:intergenic 25.0%
!! CCAATTTTCAACAACTTTTT+AGG - 57579:1679-1698 None:intergenic 25.0%
!! TTATTTGTTACTATGTGTGT+GGG + 57579:2155-2174 MS.gene020485:intron 25.0%
!! TTTGACTTTATCTAATTGGT+GGG + 57579:2699-2718 MS.gene020485:intron 25.0%
!!! ACCACTTTTTAAATTTACCA+CGG - 57579:1148-1167 None:intergenic 25.0%
!!! ATTGATTTTGGAAGAGTAAT+GGG + 57579:657-676 MS.gene020485:CDS 25.0%
!!! CTCTGTTTTTTAATTTGTTG+TGG + 57579:532-551 MS.gene020485:intron 25.0%
!!! TCTCTAAGATTAGTAGTATT+TGG + 57579:1748-1767 MS.gene020485:intron 25.0%
AAAAGGAAGAGAGAGAATAA+AGG - 57579:1608-1627 None:intergenic 30.0%
AAACTTGTAGGACTAGAATT+TGG + 57579:3091-3110 MS.gene020485:intron 30.0%
AACTGTGCACAATACTAAAT+AGG - 57579:4219-4238 None:intergenic 30.0%
AACTTGTAGGACTAGAATTT+GGG + 57579:3092-3111 MS.gene020485:intron 30.0%
AATGAGGGAATATATATACC+TGG - 57579:4004-4023 None:intergenic 30.0%
AATTGGAATAAGCTAGTAAC+AGG - 57579:4399-4418 None:intergenic 30.0%
ACATACAAACACTCAATCTA+AGG - 57579:4179-4198 None:intergenic 30.0%
ACATTGTTAACCAACAAAAG+AGG - 57579:4311-4330 None:intergenic 30.0%
ACCGTGGTAAATTTAAAAAG+TGG + 57579:1144-1163 MS.gene020485:intron 30.0%
ACGTGATATATACACAAAGT+TGG + 57579:4633-4652 MS.gene020485:intron 30.0%
ACTAGGTTAACTACATTCTT+GGG + 57579:4719-4738 MS.gene020485:intron 30.0%
ACTGTGCACAATACTAAATA+GGG - 57579:4218-4237 None:intergenic 30.0%
AGAATACATTATTCGTAACG+AGG + 57579:1909-1928 MS.gene020485:CDS 30.0%
AGGAATAATAGAGTCCTAAT+TGG - 57579:2353-2372 None:intergenic 30.0%
ATATTGCACAGGTTAATAGT+AGG - 57579:3823-3842 None:intergenic 30.0%
ATCCAAAGTTCCAATTATCA+CGG - 57579:2998-3017 None:intergenic 30.0%
ATGAATGTACCTTAGAAATG+AGG - 57579:2002-2021 None:intergenic 30.0%
ATGAGGGAATATATATACCT+GGG - 57579:4003-4022 None:intergenic 30.0%
ATGTTTATGTGAGTACAGAT+TGG + 57579:2794-2813 MS.gene020485:intron 30.0%
CAAAGAAAAGAATGCTCTTA+CGG - 57579:384-403 None:intergenic 30.0%
CAAGAAATATGATGTTGATG+GGG - 57579:3358-3377 None:intergenic 30.0%
CACAATTTCACTTTCTATCA+GGG + 57579:3301-3320 MS.gene020485:intron 30.0%
CACAGTTATTATTGCATAGA+CGG + 57579:4232-4251 MS.gene020485:intron 30.0%
CGTTTACATCACAGTAAAAT+GGG - 57579:1432-1451 None:intergenic 30.0%
CTGCTTCAATGAAATTAACA+GGG - 57579:2039-2058 None:intergenic 30.0%
GATTAATGTCCTCATTTCTA+AGG + 57579:1990-2009 MS.gene020485:CDS 30.0%
GCAAGAAATATGATGTTGAT+GGG - 57579:3359-3378 None:intergenic 30.0%
GGTTAACAATGTAAAAAAGG+TGG + 57579:4319-4338 MS.gene020485:intron 30.0%
TAACATTTCCCTACAAGAAA+AGG - 57579:3384-3403 None:intergenic 30.0%
TAATGTATGCATATTGGGAA+TGG - 57579:2382-2401 None:intergenic 30.0%
TACTAGGTTAACTACATTCT+TGG + 57579:4718-4737 MS.gene020485:intron 30.0%
TAGGACTCTATTATTCCTAT+TGG + 57579:2355-2374 MS.gene020485:intron 30.0%
TCAACATCAGACAAAACTAA+CGG + 57579:4552-4571 MS.gene020485:intron 30.0%
TCAAGATAGCAATGAGAAAA+GGG + 57579:2874-2893 MS.gene020485:intron 30.0%
TGAGATTGATTGATATCAAG+GGG + 57579:3054-3073 MS.gene020485:intron 30.0%
TGCAAGAAATATGATGTTGA+TGG - 57579:3360-3379 None:intergenic 30.0%
TGTTCCAAATGTTTACGATA+TGG - 57579:3174-3193 None:intergenic 30.0%
TTTATTTGTTCAACATTGCC+TGG + 57579:3950-3969 MS.gene020485:CDS 30.0%
TTTCAATACCAATCACCAAA+CGG - 57579:2853-2872 None:intergenic 30.0%
! AAGAAATATGATGTTGATGG+GGG - 57579:3357-3376 None:intergenic 30.0%
! AGAGGAAGTTTGAGTTATTT+AGG - 57579:4293-4312 None:intergenic 30.0%
! CCAATAATAATGGAGGAAAA+AGG + 57579:1648-1667 MS.gene020485:intron 30.0%
! CCATTTTACTGTGATGTAAA+CGG + 57579:1430-1449 MS.gene020485:CDS 30.0%
! CCTTTTTCCTCCATTATTAT+TGG - 57579:1651-1670 None:intergenic 30.0%
! TACAAAACCCAATGACTTTT+TGG - 57579:3742-3761 None:intergenic 30.0%
! TAGAAAAAGCTTTATCCGTT+TGG + 57579:2835-2854 MS.gene020485:intron 30.0%
! TATAACCGGTTTACTATAAG+CGG - 57579:2587-2606 None:intergenic 30.0%
!! AAAAGTCATTGGGTTTTGTA+CGG + 57579:3742-3761 MS.gene020485:intron 30.0%
!! AGTAGGAGTATTTATACTTG+AGG + 57579:1515-1534 MS.gene020485:intron 30.0%
!! ATTATTTTATCTTGTGCAGG+AGG + 57579:3874-3893 MS.gene020485:intron 30.0%
!! GATTGATTTTGGAAGAGTAA+TGG + 57579:656-675 MS.gene020485:CDS 30.0%
!! TAATTTGTTGTGGTTGTTTC+AGG + 57579:542-561 MS.gene020485:intron 30.0%
!!! AAGAGCATTCTTTTCTTTGA+AGG + 57579:385-404 MS.gene020485:CDS 30.0%
!!! TTTTTAGTTCTGGAAATGGA+TGG + 57579:3229-3248 MS.gene020485:intron 30.0%
ACAATGGTGTGTTACAAGAA+AGG - 57579:3570-3589 None:intergenic 35.0%
ACACCATTAATGAGTTTGGT+TGG + 57579:1950-1969 MS.gene020485:CDS 35.0%
ACAGAACAATACCTCTTTGA+TGG + 57579:1484-1503 MS.gene020485:intron 35.0%
ACTGAATAGTACCATCAAAG+AGG - 57579:1498-1517 None:intergenic 35.0%
AGGGAACTTTATCACTAGAT+TGG - 57579:2292-2311 None:intergenic 35.0%
ATATATCAATGCACCACTTG+TGG + 57579:4996-5015 MS.gene020485:CDS 35.0%
ATGCATGGTACAACAAGAAA+GGG + 57579:2770-2789 MS.gene020485:intron 35.0%
CAAGATAGCAATGAGAAAAG+GGG + 57579:2875-2894 MS.gene020485:intron 35.0%
CAATGGTGTGTTACAAGAAA+GGG - 57579:3569-3588 None:intergenic 35.0%
CACCATTAATGAGTTTGGTT+GGG + 57579:1951-1970 MS.gene020485:CDS 35.0%
CCAAATGTTTACGATATGGA+GGG - 57579:3170-3189 None:intergenic 35.0%
CCGTTTACATCACAGTAAAA+TGG - 57579:1433-1452 None:intergenic 35.0%
CTAGGTTAACTACATTCTTG+GGG + 57579:4720-4739 MS.gene020485:intron 35.0%
CTTCAATGAAATTAACAGGG+AGG - 57579:2036-2055 None:intergenic 35.0%
GCACAATTTCACTTTCTATC+AGG + 57579:3300-3319 MS.gene020485:intron 35.0%
GCTGCTTCAATGAAATTAAC+AGG - 57579:2040-2059 None:intergenic 35.0%
GCTTTAATCTGAACCAAACT+GGG + 57579:3129-3148 MS.gene020485:intron 35.0%
GGCAAAACAAAACACAATGA+GGG - 57579:4019-4038 None:intergenic 35.0%
GGTCCCAAAGAATTAATCAA+CGG - 57579:4520-4539 None:intergenic 35.0%
GTAATCCGCTTATAGTAAAC+CGG + 57579:2579-2598 MS.gene020485:intron 35.0%
GTCAAGATAGCAATGAGAAA+AGG + 57579:2873-2892 MS.gene020485:intron 35.0%
GTCCCAAAGAATTAATCAAC+GGG - 57579:4519-4538 None:intergenic 35.0%
TATATCAATGCACCACTTGT+GGG + 57579:4997-5016 MS.gene020485:CDS 35.0%
TATGCATGGTACAACAAGAA+AGG + 57579:2769-2788 MS.gene020485:intron 35.0%
TATTGCATAGACGGCAATAT+TGG + 57579:4241-4260 MS.gene020485:intron 35.0%
TCCAAATGTTTACGATATGG+AGG - 57579:3171-3190 None:intergenic 35.0%
TCCCAAAGAATTAATCAACG+GGG - 57579:4518-4537 None:intergenic 35.0%
TGAGGGAATATATATACCTG+GGG - 57579:4002-4021 None:intergenic 35.0%
TTAAAGGCGACGTCAAATAT+AGG + 57579:732-751 MS.gene020485:CDS 35.0%
TTATGAATCACGGAGTTAGT+TGG + 57579:1261-1280 MS.gene020485:intron 35.0%
TTCCGTGATAATTGGAACTT+TGG + 57579:2993-3012 MS.gene020485:intron 35.0%
TTGTGCAGAAAATAATGGTG+AGG - 57579:3286-3305 None:intergenic 35.0%
TTTACCATAACCAACCATGT+AGG - 57579:4764-4783 None:intergenic 35.0%
TTTCTTGTAACACACCATTG+TGG + 57579:3569-3588 MS.gene020485:intron 35.0%
! ACTCAAACTTCCTCTTTTGT+TGG + 57579:4298-4317 MS.gene020485:intron 35.0%
! AGAAGCAATTTAGAGTAAGC+AGG - 57579:942-961 None:intergenic 35.0%
! CGTTGCTTTCATTTACTACT+AGG + 57579:4702-4721 MS.gene020485:intron 35.0%
! CTTTGATGGTACTATTCAGT+AGG + 57579:1498-1517 MS.gene020485:intron 35.0%
! GGAAAATCACTTGTGGTTTT+AGG + 57579:1828-1847 MS.gene020485:intron 35.0%
! TCCCCGTTGATTAATTCTTT+GGG + 57579:4514-4533 MS.gene020485:intron 35.0%
! TCTTGCATCCTTTTCTTGTA+GGG + 57579:3373-3392 MS.gene020485:intron 35.0%
! TTCCCCGTTGATTAATTCTT+TGG + 57579:4513-4532 MS.gene020485:intron 35.0%
! TTCTTGCATCCTTTTCTTGT+AGG + 57579:3372-3391 MS.gene020485:intron 35.0%
!! AAAGTCATTGGGTTTTGTAC+GGG + 57579:3743-3762 MS.gene020485:intron 35.0%
!! TTAAGTGAAGTGCTCTGTTT+TGG - 57579:2447-2466 None:intergenic 35.0%
!!! GTTTTAGGATGAGTTGCTTT+GGG + 57579:1843-1862 MS.gene020485:intron 35.0%
AAACCCTAACCCAAATGTCT+TGG + 57579:4888-4907 MS.gene020485:CDS 40.0%
ACAAACAGACCACGTGATAA+GGG - 57579:2311-2330 None:intergenic 40.0%
AGAGAGAAGATTGCATGGAA+TGG - 57579:998-1017 None:intergenic 40.0%
ATGTGAAATGAGGCTTACTC+CGG - 57579:488-507 None:intergenic 40.0%
ATTCTGTTAGGTCAGAGACA+CGG + 57579:3766-3785 MS.gene020485:intron 40.0%
ATTGGCATGGCTTAGGTAAT+TGG - 57579:4416-4435 None:intergenic 40.0%
CAAGAAAGGGTCATGTTAAC+CGG - 57579:3556-3575 None:intergenic 40.0%
CAGAAGAAACACAATGCATG+TGG - 57579:2493-2512 None:intergenic 40.0%
CATATTGGGAATGGACCAAT+AGG - 57579:2373-2392 None:intergenic 40.0%
CCCTCCATATCGTAAACATT+TGG + 57579:3167-3186 MS.gene020485:intron 40.0%
CGCTTTAATCTGAACCAAAC+TGG + 57579:3128-3147 MS.gene020485:intron 40.0%
CGTAACGTATCCATATCTTC+CGG - 57579:819-838 None:intergenic 40.0%
CTGGTTAAGGAAGCTAAAAG+TGG - 57579:3520-3539 None:intergenic 40.0%
CTGTGATGTAAACGGTTATC+AGG + 57579:1438-1457 MS.gene020485:CDS 40.0%
GAATCTATGACACGATGAAG+AGG + 57579:2729-2748 MS.gene020485:intron 40.0%
GAGAGAAGATTGCATGGAAT+GGG - 57579:997-1016 None:intergenic 40.0%
GATAAAGTTCCCTTATCACG+TGG + 57579:2299-2318 MS.gene020485:intron 40.0%
GCAAGACATTCCGTGATAAT+TGG + 57579:2985-3004 MS.gene020485:intron 40.0%
GCACAGTTTACAAGATCGAT+GGG + 57579:838-857 MS.gene020485:CDS 40.0%
GGAATAAGCTAGTAACAGGA+AGG - 57579:4395-4414 None:intergenic 40.0%
GGGCAAAACAAAACACAATG+AGG - 57579:4020-4039 None:intergenic 40.0%
GGTGACACCATTAATGAGTT+TGG + 57579:1946-1965 MS.gene020485:CDS 40.0%
GTCCCAACCAAACTCATTAA+TGG - 57579:1956-1975 None:intergenic 40.0%
GTGATGCACTTTCTCCAATT+AGG + 57579:2336-2355 MS.gene020485:intron 40.0%
TCAAGTCGGTGATCCTTTAT+CGG + 57579:773-792 MS.gene020485:CDS 40.0%
TTAATCTGAACCAAACTGGG+TGG + 57579:3132-3151 MS.gene020485:intron 40.0%
TTAATGATGGCTTAGGCCTT+TGG - 57579:4131-4150 None:intergenic 40.0%
TTACAACGACGATGTTAGCT+TGG + 57579:628-647 MS.gene020485:CDS 40.0%
TTACCTAAGCCATGCCAATA+AGG + 57579:4417-4436 MS.gene020485:CDS 40.0%
TTGTAGGACTAGAATTTGGG+TGG + 57579:3095-3114 MS.gene020485:intron 40.0%
TTTATCGGACCACAACTGTT+GGG + 57579:788-807 MS.gene020485:CDS 40.0%
! AAAAGGTGGGCTTATCTTCA+AGG + 57579:4333-4352 MS.gene020485:intron 40.0%
! AAGACATTTGGGTTAGGGTT+TGG - 57579:4889-4908 None:intergenic 40.0%
! ACAGAGCACTATGTGAAATG+AGG - 57579:498-517 None:intergenic 40.0%
! AGACATTTGGGTTAGGGTTT+GGG - 57579:4888-4907 None:intergenic 40.0%
! AGCTTTATCCGTTTGGTGAT+TGG + 57579:2842-2861 MS.gene020485:intron 40.0%
! ATGTCCTACATGGTTGGTTA+TGG + 57579:4757-4776 MS.gene020485:CDS 40.0%
! CAACCAAGACATTTGGGTTA+GGG - 57579:4894-4913 None:intergenic 40.0%
! GGTGCATTGATATATGTCGT+GGG - 57579:4991-5010 None:intergenic 40.0%
! GTTTTGTACGGGATTCTGTT+AGG + 57579:3754-3773 MS.gene020485:intron 40.0%
! TAAATTCCCGGTAAAGTGCT+TGG - 57579:1199-1218 None:intergenic 40.0%
! TATCTAATTGGTGGGTCACA+TGG + 57579:2707-2726 MS.gene020485:intron 40.0%
! TGGTGCATTGATATATGTCG+TGG - 57579:4992-5011 None:intergenic 40.0%
! TGTTGATGGGGGCTTAAAAA+AGG - 57579:3346-3365 None:intergenic 40.0%
! TTTGTTGTGGTTGTTTCAGG+TGG + 57579:545-564 MS.gene020485:intron 40.0%
!! AACGAATCTGTAGTGTTGGT+AGG - 57579:4934-4953 None:intergenic 40.0%
!! AAGGCTTTTGAGTAATGCAG+GGG - 57579:4470-4489 None:intergenic 40.0%
!! CAAGGCTTTTGAGTAATGCA+GGG - 57579:4471-4490 None:intergenic 40.0%
!! GCTTGGAGTGTGATTGATTT+TGG + 57579:645-664 MS.gene020485:CDS 40.0%
!!! CTGTTTTGGTGTTTTGCTTG+TGG - 57579:2433-2452 None:intergenic 40.0%
!!! GGGAACGGACTATCTTTTAA+AGG + 57579:716-735 MS.gene020485:CDS 40.0%
!!! GGTTTTAGGATGAGTTGCTT+TGG + 57579:1842-1861 MS.gene020485:intron 40.0%
AACGGGGAATGCAAGACAAT+AGG - 57579:2224-2243 None:intergenic 45.0%
ACAGCTCCAACCAAGACATT+TGG - 57579:4901-4920 None:intergenic 45.0%
ACCACATGGCACAACCTTAT+TGG - 57579:4434-4453 None:intergenic 45.0%
ACCATGTAGGACATTCCCAA+CGG - 57579:4751-4770 None:intergenic 45.0%
ACTTGTGCGTGAGAAAATCC+AGG - 57579:3971-3990 None:intergenic 45.0%
AGCTAGTAACAGGAAGGACA+AGG - 57579:4389-4408 None:intergenic 45.0%
AGGGAACGAATCTGTAGTGT+TGG - 57579:4938-4957 None:intergenic 45.0%
AGGGAATTGAGCTTCCTCTA+TGG - 57579:4807-4826 None:intergenic 45.0%
AGTTACAGCAGTGACAGCAA+GGG - 57579:3618-3637 None:intergenic 45.0%
ATCACGTGATCTGAACACGA+TGG - 57579:919-938 None:intergenic 45.0%
ATCCAGCTTTGCATCCAATG+TGG - 57579:4849-4868 None:intergenic 45.0%
ATCGTCGTTGTAAACGCCAT+CGG - 57579:621-640 None:intergenic 45.0%
ATGGCACAACCTTATTGGCA+TGG - 57579:4429-4448 None:intergenic 45.0%
ATTCTTGGGGATAACCCGTT+GGG + 57579:4733-4752 MS.gene020485:CDS 45.0%
ATTGTCTTGCATTCCCCGTT+AGG + 57579:2224-2243 MS.gene020485:intron 45.0%
CAACAGTTGTGGTCCGATAA+AGG - 57579:789-808 None:intergenic 45.0%
CAACCTTATTGGCATGGCTT+AGG - 57579:4423-4442 None:intergenic 45.0%
CACAAACAGACCACGTGATA+AGG - 57579:2312-2331 None:intergenic 45.0%
CACATGCATAGTGCAGTACT+GGG - 57579:3261-3280 None:intergenic 45.0%
CAGCTCCAACCAAGACATTT+GGG - 57579:4900-4919 None:intergenic 45.0%
CCTAACCCAAATGTCTTGGT+TGG + 57579:4892-4911 MS.gene020485:CDS 45.0%
CGCACAGTTTACAAGATCGA+TGG + 57579:837-856 MS.gene020485:CDS 45.0%
CTCTATGGTGTATCCTCTGT+GGG - 57579:4792-4811 None:intergenic 45.0%
CTTTATCGGACCACAACTGT+TGG + 57579:787-806 MS.gene020485:CDS 45.0%
GAGAGAGAGAGAAGATTGCA+TGG - 57579:1003-1022 None:intergenic 45.0%
GATAGAAAGGCCTGGAATCA+GGG - 57579:4957-4976 None:intergenic 45.0%
GATATGGAGGGCAAAGAGTT+TGG - 57579:3158-3177 None:intergenic 45.0%
GCACAAGTTCAATATTCCCC+AGG + 57579:3983-4002 MS.gene020485:CDS 45.0%
GCGACGTCAAATATAGGTTC+CGG + 57579:738-757 MS.gene020485:CDS 45.0%
GGTGAGAAAATGACCGTTGA+TGG + 57579:1326-1345 MS.gene020485:intron 45.0%
GTAACGCGTTGAAATCAGTG+AGG + 57579:691-710 MS.gene020485:CDS 45.0%
GTAGAAAACTAGCGAAACCG+TGG + 57579:1128-1147 MS.gene020485:intron 45.0%
TCCAGCTTTGCATCCAATGT+GGG - 57579:4848-4867 None:intergenic 45.0%
TGATAGAAAGGCCTGGAATC+AGG - 57579:4958-4977 None:intergenic 45.0%
TGTGCAACTGTGCATATGCA+TGG + 57579:2755-2774 MS.gene020485:intron 45.0%
TTCTGTTAGGTCAGAGACAC+GGG + 57579:3767-3786 MS.gene020485:intron 45.0%
TTGGGAATGTCCTACATGGT+TGG + 57579:4751-4770 MS.gene020485:CDS 45.0%
! CATAAAGTTCGGGTTTCCGA+TGG + 57579:602-621 MS.gene020485:CDS 45.0%
! CCAACCAAGACATTTGGGTT+AGG - 57579:4895-4914 None:intergenic 45.0%
! GAGAAAATGACCGTTGATGG+TGG + 57579:1329-1348 MS.gene020485:intron 45.0%
! TTCTTTGAAGGACAACGCTC+TGG + 57579:397-416 MS.gene020485:CDS 45.0%
! TTGTTTCAGGTGGACTTGAC+CGG + 57579:555-574 MS.gene020485:intron 45.0%
!! CTTGTGCAGGAGGTGTTAAT+GGG + 57579:3884-3903 MS.gene020485:intron 45.0%
!! GCAAGGCTTTTGAGTAATGC+AGG - 57579:4472-4491 None:intergenic 45.0%
!! TCTTGTGCAGGAGGTGTTAA+TGG + 57579:3883-3902 MS.gene020485:intron 45.0%
!!! AACGAGGTTGTTTTGAGAGC+TGG + 57579:1925-1944 MS.gene020485:CDS 45.0%
!! TATTAAAAAAAAATTAAATC+AGG + 57579:2642-2661 MS.gene020485:intron 5.0%
AAATGTTAACCAGTGCCCCC+GGG + 57579:3396-3415 MS.gene020485:intron 50.0%
AAGAGTTTGGCCACCCAGTT+TGG - 57579:3145-3164 None:intergenic 50.0%
AATGAAGCTGACCTGGCGTT+TGG - 57579:4494-4513 None:intergenic 50.0%
ACCCATGTGTCCATGACCAA+AGG + 57579:4112-4131 MS.gene020485:intron 50.0%
ACGCGTTGAAATCAGTGAGG+TGG + 57579:694-713 MS.gene020485:CDS 50.0%
AGACTGCTGATAGAAAGGCC+TGG - 57579:4965-4984 None:intergenic 50.0%
AGCATCGTGATAGTCGTGAC+CGG - 57579:359-378 None:intergenic 50.0%
AGTAAAATGGGCACACTGCC+CGG - 57579:1420-1439 None:intergenic 50.0%
ATACAGTAACAGCCTACGCC+GGG + 57579:1399-1418 MS.gene020485:CDS 50.0%
ATGAAAGCGACGCACCGTAA+CGG - 57579:973-992 None:intergenic 50.0%
ATGGCTTAGGCCTTTGGTCA+TGG - 57579:4125-4144 None:intergenic 50.0%
ATGGTAAACGCTACCCACAG+AGG + 57579:4776-4795 MS.gene020485:CDS 50.0%
CACACACTCACCACCATCAA+CGG - 57579:1342-1361 None:intergenic 50.0%
CAGATTCGTTCCCTGATTCC+AGG + 57579:4944-4963 MS.gene020485:CDS 50.0%
CAGTTACAGCAGTGACAGCA+AGG - 57579:3619-3638 None:intergenic 50.0%
CATACAGTAACAGCCTACGC+CGG + 57579:1398-1417 MS.gene020485:CDS 50.0%
CATTCTTGGGGATAACCCGT+TGG + 57579:4732-4751 MS.gene020485:CDS 50.0%
CCACAGAGGATACACCATAG+AGG + 57579:4790-4809 MS.gene020485:CDS 50.0%
CCATGTAGGACATTCCCAAC+GGG - 57579:4750-4769 None:intergenic 50.0%
CCCATTCCAAGCACTTTACC+GGG + 57579:1190-1209 MS.gene020485:intron 50.0%
CCCGAACTTTATGTTGTCGC+CGG - 57579:595-614 None:intergenic 50.0%
CCGGCGACAACATAAAGTTC+GGG + 57579:592-611 MS.gene020485:CDS 50.0%
CCTCTATGGTGTATCCTCTG+TGG - 57579:4793-4812 None:intergenic 50.0%
CGATTGTTCGGAGCAAAAGG+AGG - 57579:333-352 None:intergenic 50.0%
CGCGTTGAAATCAGTGAGGT+GGG + 57579:695-714 MS.gene020485:CDS 50.0%
CGTCGTGAATTCCAGAGTCA+CGG - 57579:456-475 None:intergenic 50.0%
GAAATCAGTGAGGTGGGGAA+CGG + 57579:701-720 MS.gene020485:CDS 50.0%
GAAATGTTAACCAGTGCCCC+CGG + 57579:3395-3414 MS.gene020485:intron 50.0%
GACTTGAACAAACACCACGC+CGG - 57579:760-779 None:intergenic 50.0%
GCACATGCATAGTGCAGTAC+TGG - 57579:3262-3281 None:intergenic 50.0%
GCCAATAAGGTTGTGCCATG+TGG + 57579:4430-4449 MS.gene020485:CDS 50.0%
GCCCATTCCAAGCACTTTAC+CGG + 57579:1189-1208 MS.gene020485:intron 50.0%
GCCGGCGACAACATAAAGTT+CGG + 57579:591-610 MS.gene020485:CDS 50.0%
GCCTTTGGTCATGGACACAT+GGG - 57579:4116-4135 None:intergenic 50.0%
GCGTTGAAATCAGTGAGGTG+GGG + 57579:696-715 MS.gene020485:CDS 50.0%
GGCGTGGTGTTTGTTCAAGT+CGG + 57579:759-778 MS.gene020485:CDS 50.0%
GGCTCAGACTGCTGATAGAA+AGG - 57579:4970-4989 None:intergenic 50.0%
GTCAAATATAGGTTCCGGCG+TGG + 57579:743-762 MS.gene020485:CDS 50.0%
GTCTTGGTTGGAGCTGTAGT+TGG + 57579:4904-4923 MS.gene020485:CDS 50.0%
GTTGGGACAACAAGCATGCT+GGG + 57579:1968-1987 MS.gene020485:CDS 50.0%
TAACTCCTTAACCAGTGCCC+CGG - 57579:3417-3436 None:intergenic 50.0%
TCGGAGCAAAAGGAGGAGTA+TGG - 57579:326-345 None:intergenic 50.0%
TCTGAACACGATGGAAGCAG+CGG - 57579:910-929 None:intergenic 50.0%
TCTGTATAGACGTCTACGCG+AGG - 57579:1890-1909 None:intergenic 50.0%
TGAAATGAGGCTTACTCCGG+CGG - 57579:485-504 None:intergenic 50.0%
TGGTTGGAGCTGTAGTTGGT+GGG + 57579:4908-4927 MS.gene020485:CDS 50.0%
TTCAACGCGTTACCTAGCTC+AGG - 57579:684-703 None:intergenic 50.0%
TTGGGAGAGACCGGAAGATA+TGG + 57579:806-825 MS.gene020485:CDS 50.0%
TTGGTTGGAGCTGTAGTTGG+TGG + 57579:4907-4926 MS.gene020485:CDS 50.0%
! AGAGTAATGGGACCTGAGCT+AGG + 57579:669-688 MS.gene020485:CDS 50.0%
! ATGCATAGTGCAGTACTGGG+TGG - 57579:3258-3277 None:intergenic 50.0%
! CCCGGTAAAGTGCTTGGAAT+GGG - 57579:1193-1212 None:intergenic 50.0%
! GCTTCTCAATCGTGCCGTTA+CGG + 57579:956-975 MS.gene020485:CDS 50.0%
! TCCCGGTAAAGTGCTTGGAA+TGG - 57579:1194-1213 None:intergenic 50.0%
! TGCATAGTGCAGTACTGGGT+GGG - 57579:3257-3276 None:intergenic 50.0%
!! CGTGACTCTGGAATTCACGA+CGG + 57579:454-473 MS.gene020485:CDS 50.0%
!! GAGTTTGCTGACAGACATCG+TGG + 57579:1373-1392 MS.gene020485:CDS 50.0%
!! GCTTTTGAGTAATGCAGGGG+TGG - 57579:4467-4486 None:intergenic 50.0%
AAAGCGAGCAGACCCACAAG+TGG - 57579:5012-5031 None:intergenic 55.0%
AACTCCTTAACCAGTGCCCC+GGG - 57579:3416-3435 None:intergenic 55.0%
AAGATCGATGGGTCCCATCC+AGG + 57579:849-868 MS.gene020485:CDS 55.0%
AATGTTAACCAGTGCCCCCG+GGG + 57579:3397-3416 MS.gene020485:intron 55.0%
ACGGGGAAATGAAGCTGACC+TGG - 57579:4501-4520 None:intergenic 55.0%
AGCTTCCTTAACCAGTGCCC+CGG + 57579:3525-3544 MS.gene020485:intron 55.0%
AGTGGAGACGCTGATCAGAC+GGG - 57579:429-448 None:intergenic 55.0%
ATCGTGATAGTCGTGACCGG+CGG - 57579:356-375 None:intergenic 55.0%
CAAAAGCCTTGCCAAACGCC+AGG + 57579:4480-4499 MS.gene020485:CDS 55.0%
CAGCAGTGACAGCAAGGGAA+AGG - 57579:3613-3632 None:intergenic 55.0%
CAGTGGAGACGCTGATCAGA+CGG - 57579:430-449 None:intergenic 55.0%
CCACAACTGTTGGGAGAGAC+CGG + 57579:797-816 MS.gene020485:CDS 55.0%
CCCGTTGGGAATGTCCTACA+TGG + 57579:4747-4766 MS.gene020485:CDS 55.0%
CGGCGATTGTTCGGAGCAAA+AGG - 57579:336-355 None:intergenic 55.0%
GCATTCCCCGTTAGGCATGT+GGG + 57579:2232-2251 MS.gene020485:intron 55.0%
GCCCACATTGGATGCAAAGC+TGG + 57579:4844-4863 MS.gene020485:CDS 55.0%
GCTTTGCATCCAATGTGGGC+TGG - 57579:4844-4863 None:intergenic 55.0%
GGCCTTTGGTCATGGACACA+TGG - 57579:4117-4136 None:intergenic 55.0%
GGGCTTATCTTCAAGGCTGG+TGG + 57579:4340-4359 MS.gene020485:CDS 55.0%
GGTTGGGACAACAAGCATGC+TGG + 57579:1967-1986 MS.gene020485:CDS 55.0%
TATGGCGAGGACGCGAAATG+TGG - 57579:308-327 None:intergenic 55.0%
TGCATTCCCCGTTAGGCATG+TGG + 57579:2231-2250 MS.gene020485:intron 55.0%
! ATGGTGGTGAGTGTGTGTGC+AGG + 57579:1345-1364 MS.gene020485:intron 55.0%
! GCAAAAGGAGGAGTATGGCG+AGG - 57579:321-340 None:intergenic 55.0%
! GGTGGGCTTATCTTCAAGGC+TGG + 57579:4337-4356 MS.gene020485:intron 55.0%
! TTTCAGGTGGACTTGACCGG+AGG + 57579:558-577 MS.gene020485:intron 55.0%
!! GCATCCAATGTGGGCTGGAT+GGG - 57579:4839-4858 None:intergenic 55.0%
!! GCTGGATGGGCTGAAACTGA+GGG - 57579:4826-4845 None:intergenic 55.0%
!! TGCATCCAATGTGGGCTGGA+TGG - 57579:4840-4859 None:intergenic 55.0%
AATGAGGCTTACTCCGGCGG+TGG - 57579:482-501 None:intergenic 60.0%
ACCGGAGGTTACTACGACGC+CGG + 57579:573-592 MS.gene020485:CDS 60.0%
ACTCCTTAACCAGTGCCCCG+GGG - 57579:3415-3434 None:intergenic 60.0%
AGCTGACCTGGCGTTTGGCA+AGG - 57579:4489-4508 None:intergenic 60.0%
CCGGTCTCTCCCAACAGTTG+TGG - 57579:800-819 None:intergenic 60.0%
CGTCTGATCAGCGTCTCCAC+TGG + 57579:428-447 MS.gene020485:CDS 60.0%
CTGCGCACCCACATGCCTAA+CGG - 57579:2242-2261 None:intergenic 60.0%
CTTCCTTAACCAGTGCCCCG+GGG + 57579:3527-3546 MS.gene020485:intron 60.0%
GAGTAATGCAGGGGTGGCAG+TGG - 57579:4461-4480 None:intergenic 60.0%
GCTTCCTTAACCAGTGCCCC+GGG + 57579:3526-3545 MS.gene020485:intron 60.0%
GTCATGTTAACCGGTGCCCC+CGG - 57579:3547-3566 None:intergenic 60.0%
TCAGCCCATCCAGCCCACAT+TGG + 57579:4832-4851 MS.gene020485:CDS 60.0%
TCATGTTAACCGGTGCCCCC+GGG - 57579:3546-3565 None:intergenic 60.0%
TGCCACGTCGGATCCTGGAT+GGG - 57579:865-884 None:intergenic 60.0%
TGCGCACCCACATGCCTAAC+GGG - 57579:2241-2260 None:intergenic 60.0%
TTCCTTAACCAGTGCCCCGG+GGG + 57579:3528-3547 MS.gene020485:intron 60.0%
TTGCTCCGAACAATCGCCGC+CGG + 57579:337-356 MS.gene020485:CDS 60.0%
! AGTTGCTTTGGGCTGCAGCG+TGG + 57579:1854-1873 MS.gene020485:CDS 60.0%
!! GGCTGGATGGGCTGAAACTG+AGG - 57579:4827-4846 None:intergenic 60.0%
!! GTGGCAGTGGTGTCACCACA+TGG - 57579:4448-4467 None:intergenic 60.0%
CATCCAGGATCCGACGTGGC+AGG + 57579:864-883 MS.gene020485:CDS 65.0%
CATGTTAACCGGTGCCCCCG+GGG - 57579:3545-3564 None:intergenic 65.0%
CGTGACCGGCGGCGATTGTT+CGG - 57579:345-364 None:intergenic 65.0%
CTCCTTAACCAGTGCCCCGG+GGG - 57579:3414-3433 None:intergenic 65.0%
CTGCCACGTCGGATCCTGGA+TGG - 57579:866-885 None:intergenic 65.0%
GCCGGCGTCGTAGTAACCTC+CGG - 57579:577-596 None:intergenic 65.0%
GCGCACCCACATGCCTAACG+GGG - 57579:2240-2259 None:intergenic 65.0%
GGAAGCAGCGGCAAGTGCAG+CGG - 57579:898-917 None:intergenic 65.0%
GGCGGTTTCACCTGCCACGT+CGG - 57579:877-896 None:intergenic 65.0%
GGCTGCAGCGTGGTTGCACA+AGG + 57579:1864-1883 MS.gene020485:CDS 65.0%
GTCCCATCCAGGATCCGACG+TGG + 57579:860-879 MS.gene020485:CDS 65.0%
TCACCTGCCACGTCGGATCC+TGG - 57579:870-889 None:intergenic 65.0%
TTCCAGAGTCACGGCGCCAG+TGG - 57579:447-466 None:intergenic 65.0%
!! ATTCACGACGGTGCCACCGC+CGG + 57579:466-485 MS.gene020485:CDS 65.0%
AGCAGCGGCAAGTGCAGCGG+CGG - 57579:895-914 None:intergenic 70.0%
ATGGGCACACTGCCCGGCGT+AGG - 57579:1414-1433 None:intergenic 70.0%
CTCCACTGGCGCCGTGACTC+TGG + 57579:442-461 MS.gene020485:CDS 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG + 57579:3409-3428 MS.gene020485:intron 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG - 57579:3428-3409 None:intergenic 70.0%
AACCAGTGCCCCCGGGGCAC+TGG + 57579:3403-3422 MS.gene020485:intron 75.0%
! AACCAGTGCCCCGGGGGCAC+CGG + 57579:3534-3553 MS.gene020485:intron 75.0%
! AACCAGTGCCCCGGGGGCAC+TGG - 57579:3553-3534 None:intergenic 75.0%
! AACCGGTGCCCCCGGGGCAC+TGG - 57579:3539-3558 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
57579 gene 277 5050 277 ID=MS.gene020485
57579 mRNA 277 5050 277 ID=MS.gene020485.t1;Parent=MS.gene020485
57579 exon 277 489 277 ID=MS.gene020485.t1.exon1;Parent=MS.gene020485.t1
57579 CDS 277 489 277 ID=cds.MS.gene020485.t1;Parent=MS.gene020485.t1
57579 exon 564 977 564 ID=MS.gene020485.t1.exon2;Parent=MS.gene020485.t1
57579 CDS 564 977 564 ID=cds.MS.gene020485.t1;Parent=MS.gene020485.t1
57579 exon 1367 1459 1367 ID=MS.gene020485.t1.exon3;Parent=MS.gene020485.t1
57579 CDS 1367 1459 1367 ID=cds.MS.gene020485.t1;Parent=MS.gene020485.t1
57579 exon 1850 2011 1850 ID=MS.gene020485.t1.exon4;Parent=MS.gene020485.t1
57579 CDS 1850 2011 1850 ID=cds.MS.gene020485.t1;Parent=MS.gene020485.t1
57579 exon 3893 4004 3893 ID=MS.gene020485.t1.exon5;Parent=MS.gene020485.t1
57579 CDS 3893 4004 3893 ID=cds.MS.gene020485.t1;Parent=MS.gene020485.t1
57579 exon 4338 4501 4338 ID=MS.gene020485.t1.exon6;Parent=MS.gene020485.t1
57579 CDS 4338 4501 4338 ID=cds.MS.gene020485.t1;Parent=MS.gene020485.t1
57579 exon 4724 5050 4724 ID=MS.gene020485.t1.exon7;Parent=MS.gene020485.t1
57579 CDS 4724 5050 4724 ID=cds.MS.gene020485.t1;Parent=MS.gene020485.t1
Gene Sequence

>MS.gene020485

ATGGCGCGAAATGCTTTATCTTCTATTACCACATTTCGCGTCCTCGCCATACTCCTCCTTTTGCTCCGAACAATCGCCGCCGGTCACGACTATCACGATGCTCTCCGTAAGAGCATTCTTTTCTTTGAAGGACAACGCTCTGGCAAACTCCCGTCTGATCAGCGTCTCCACTGGCGCCGTGACTCTGGAATTCACGACGGTGCCACCGCCGGAGTAAGCCTCATTTCACATAGTGCTCTGTTTTAACCTACATTGCTCTGTTTTTTAATTTGTTGTGGTTGTTTCAGGTGGACTTGACCGGAGGTTACTACGACGCCGGCGACAACATAAAGTTCGGGTTTCCGATGGCGTTTACAACGACGATGTTAGCTTGGAGTGTGATTGATTTTGGAAGAGTAATGGGACCTGAGCTAGGTAACGCGTTGAAATCAGTGAGGTGGGGAACGGACTATCTTTTAAAGGCGACGTCAAATATAGGTTCCGGCGTGGTGTTTGTTCAAGTCGGTGATCCTTTATCGGACCACAACTGTTGGGAGAGACCGGAAGATATGGATACGTTACGCACAGTTTACAAGATCGATGGGTCCCATCCAGGATCCGACGTGGCAGGTGAAACCGCCGCTGCACTTGCCGCTGCTTCCATCGTGTTCAGATCACGTGATCCTGCTTACTCTAAATTGCTTCTCAATCGTGCCGTTACGGTGCGTCGCTTTCATTCCCATTCCATGCAATCTTCTCTCTCTCTCTCTTTCACTATCCTTTCTTTTCTTCATTTTTTTAATTATTTATTATTATTTTTATGAATGATGAAAAACTAAAAAAAGCAATTTTGTTTGGCTTTAAATTGAAAAGTAGAAAACTAGCGAAACCGTGGTAAATTTAAAAAGTGGTTTGTGAAATCACTTTTTTTGTGCCCATTCCAAGCACTTTACCGGGAATTTAATTTCACTTTTTACTTTTACTACTACGACTTTTTTTTTTCTGTTATGAATCACGGAGTTAGTTGGTACATTTATTTATGCATTTAATAAAATTTTCCGTTAAGATATGGTGAGAAAATGACCGTTGATGGTGGTGAGTGTGTGTGCAGGTGTTTGAGTTTGCTGACAGACATCGTGGTGCATACAGTAACAGCCTACGCCGGGCAGTGTGCCCATTTTACTGTGATGTAAACGGTTATCAGGTACTGTATCTTGAGAGTAACATAACAGAACAATACCTCTTTGATGGTACTATTCAGTAGGAGTATTTATACTTGAGGAATGATATTTTAAAAACCAATTTTCAACAACTTTTGTGACAACTCTCTTTCATACTCTCATTACATACCTTTATTCTCTCTCTTCCTTTTTCTCTCTCTATTGTTATTGTCCAATAATAATGGAGGAAAAAGGTTGTCCCTAAAAAGTTGTTGAAAATTGGATGTCAAAATATCATTCCTCTTAATACTTACTGTATTACTTTTTTTCTCTCTCTAAGATTAGTAGTATTTGGTTTGTTATAATCATCACAATAAAAATATGTTTAATTTTTAATTTAATTTAATTAATTGGAAAATCACTTGTGGTTTTAGGATGAGTTGCTTTGGGCTGCAGCGTGGTTGCACAAGGCCTCGCGTAGACGTCTATACAGAGAATACATTATTCGTAACGAGGTTGTTTTGAGAGCTGGTGACACCATTAATGAGTTTGGTTGGGACAACAAGCATGCTGGGATTAATGTCCTCATTTCTAAGGTACATTCATTTTAGTAAGATCCTCCCTGTTAATTTCATTGAAGCAGCAATACTAAGTACTACAGTATTTTAGGAAATGTCATTTAATGTTTGTATTTTTTGTTATTTATTTAATTGAAGTGTGTTATTTTAATATGTTAGTATTATTTGTTACTATGTGTGTGGGTACTTATCGAAGTTTAGTTTGTCTTGTATGTGTTGTTTTTGTTCCTATTGTCTTGCATTCCCCGTTAGGCATGTGGGTGCGCAGTGTGATAGAACTGCTCATTATATTCATCCAATCTAGTGATAAAGTTCCCTTATCACGTGGTCTGTTTGTGCAATGTGATGCACTTTCTCCAATTAGGACTCTATTATTCCTATTGGTCCATTCCCAATATGCATACATTAATCATATAGTATAATCATATACTCGACACCACAAGCAAAACACCAAAACAGAGCACTTCACTTAATACTACCATTAATTATTTTCACACCACATGCATTGTGTTTCTTCTGTAAAATGTTTTTTGCTGAAAGTATGAAGTATATGAATCCTTATCTTAAACTTGATTAGATAAAAAAGTAATCCGCTTATAGTAAACCGGTTATATTAAATAAACTAAAACATGTTCAATTATGTCTTTCTATTAAAAAAAAATTAAATCAGGTTCAATAATGTAATAGAGAATAAAGTATTTTTAATTTGACTTTATCTAATTGGTGGGTCACATGGAATCTATGACACGATGAAGAGGTTGTGTGCAACTGTGCATATGCATGGTACAACAAGAAAGGGAATGTTTATGTGAGTACAGATTGGATTTATTTGTTTTAATTTTAGAAAAAGCTTTATCCGTTTGGTGATTGGTATTGAAAGTCAAGATAGCAATGAGAAAAGGGGAGTGTGAAATGCTGATAATTGAATTTGCACATGATGAGAATTTCATTTTTAAGTTTCATGTGGGCACCGTTTTTGTTTATTATTCAAGCAAGACATTCCGTGATAATTGGAACTTTGGATCTAAATTGTCTATGCTTATACCATTGAATTTATTTATGAGATTGATTGATATCAAGGGGCAAATTTGTCTTTAAAACTTGTAGGACTAGAATTTGGGTGGAATGTATTGTCGCTTTAATCTGAACCAAACTGGGTGGCCAAACTCTTTGCCCTCCATATCGTAAACATTTGGAACAAAAAGTCTCACCCCTTAATTAGTTTCATTTAATTTTTTTTAGTTCTGGAAATGGATGGTTCCCACCCAGTACTGCACTATGCATGTGCTCCTCACCATTATTTTCTGCACAATTTCACTTTCTATCAGGGATAGAGTACTCTGTGACTTCCTTTTTTAAGCCCCCATCAACATCATATTTCTTGCATCCTTTTCTTGTAGGGAAATGTTAACCAGTGCCCCCGGGGCACTGGTTAAGGAGTTAAATATAGTAGTATCTTGTATTGAAAGTTGTGCTGTCATTGCATTAAAAGCTTAAAAAGTGTTTTTTTTAACTTAAAATTTCCACTTTTAGCTTCCTTAACCAGTGCCCCGGGGGCACCGGTTAACATGACCCTTTCTTGTAACACACCATTGTGGTAACTTTTTTTTAATCAACCTTTCCCTTGCTGTCACTGCTGTAACTGTGAAATTTATACATGCATTGTACAGTACATTTTACACATACTACTAGTACATTATACTGTACTCTTTAAGAAAAGCAAATACTAGAAAAATGTTATCTATCCAAAAAGTCATTGGGTTTTGTACGGGATTCTGTTAGGTCAGAGACACGGGTTCAGCTCATACACAACATTATATACTACTCCTACTATTAACCTGTGCAATATAAGATAAAAAAGCCATCAATAAAATATGAATATTATTTTATCTTGTGCAGGAGGTGTTAATGGGAAGAGCAAATTATTTTTCTTCGTTCAAACGAAATGCAGATGAATTTATTTGTTCAACATTGCCTGGATTTTCTCACGCACAAGTTCAATATTCCCCAGGTATATATATTCCCTCATTGTGTTTTGTTTTGCCCATTTATTTTTGACTTTTGAGAAAGGTGATTCTCCGTGATTATAGCATTTAAATAATGAATATGATTAATGAGACCCATGTGTCCATGACCAAAGGCCTAAGCCATCATTAATGTTTTTTCTTTTTGCAAGGAAAAGCCTTAGATTGAGTGTTTGTATGTATAACTACAATGTTCTCCCTATTTAGTATTGTGCACAGTTATTATTGCATAGACGGCAATATTGGTAGCCACAGTGTTTGTTTGTTTCTTTCCTAAATAACTCAAACTTCCTCTTTTGTTGGTTAACAATGTAAAAAAGGTGGGCTTATCTTCAAGGCTGGTGGAAGTAACATGCAACATGTAACGTCCTTGTCCTTCCTGTTACTAGCTTATTCCAATTACCTAAGCCATGCCAATAAGGTTGTGCCATGTGGTGACACCACTGCCACCCCTGCATTACTCAAAAGCCTTGCCAAACGCCAGGTCAGCTTCATTTCCCCGTTGATTAATTCTTTGGGACCAATTTCTTGTTTTCAACATCAGACAAAACTAACGGCTAGATTTTTTGTCTTTATGACATTGAACTCATTGAAGTAAAATAAAATGACATCAACACGTGATATATACACAAAGTTGGTAACGTTACTCTAATAATTCACACTACATGTGAATGTACATGCTAACGTTGCTTTCATTTACTACTAGGTTAACTACATTCTTGGGGATAACCCGTTGGGAATGTCCTACATGGTTGGTTATGGTAAACGCTACCCACAGAGGATACACCATAGAGGAAGCTCAATTCCCTCAGTTTCAGCCCATCCAGCCCACATTGGATGCAAAGCTGGATCTCAATATTTCTTCAGCCCAAACCCTAACCCAAATGTCTTGGTTGGAGCTGTAGTTGGTGGGCCTACCAACACTACAGATTCGTTCCCTGATTCCAGGCCTTTCTATCAGCAGTCTGAGCCCACGACATATATCAATGCACCACTTGTGGGTCTGCTCGCTTTCTTTTCAGCTCATCCTTGA
Protein sequence

>MS.gene020485.t1

MARNALSSITTFRVLAILLLLLRTIAAGHDYHDALRKSILFFEGQRSGKLPSDQRLHWRRDSGIHDGATAGVDLTGGYYDAGDNIKFGFPMAFTTTMLAWSVIDFGRVMGPELGNALKSVRWGTDYLLKATSNIGSGVVFVQVGDPLSDHNCWERPEDMDTLRTVYKIDGSHPGSDVAGETAAALAAASIVFRSRDPAYSKLLLNRAVTVFEFADRHRGAYSNSLRRAVCPFYCDVNGYQDELLWAAAWLHKASRRRLYREYIIRNEVVLRAGDTINEFGWDNKHAGINVLISKEVLMGRANYFSSFKRNADEFICSTLPGFSHAQVQYSPGGLIFKAGGSNMQHVTSLSFLLLAYSNYLSHANKVVPCGDTTATPALLKSLAKRQVNYILGDNPLGMSYMVGYGKRYPQRIHHRGSSIPSVSAHPAHIGCKAGSQYFFSPNPNPNVLVGAVVGGPTNTTDSFPDSRPFYQQSEPTTYINAPLVGLLAFFSAHP