AlfalfaGEDB | MS.gene42272

M. sativa cultivar XinJiangDaYe / MS.gene42272

KEGG: -
GO: GO:0003674 GO:0003824 GO:0004553 GO:0005975 GO:0008150 GO:0008152 GO:0016787 GO:0016798 GO:0044238 GO:0071704
PFAM: PF00759.22

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene42272.t1	XP_003603741.2	99.6	529	2	0	1	529	1	529	0.00E+00	1078.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene42272.t1	Q8LCP6	70.5	528	150	5	1	527	1	523	1.2e-219	763.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene42272.t1	G7J4Q1	99.6	529	2	0	1	529	1	529	0.0e+00	1078.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene42272	MS.gene024650	PPI
MS.gene20757	MS.gene42272	PPI
MS.gene42272	MS.gene064746	PPI
MS.gene020483	MS.gene42272	PPI
MS.gene42272	MS.gene32754	PPI
MS.gene016750	MS.gene42272	PPI
MS.gene25810	MS.gene42272	PPI
MS.gene70730	MS.gene42272	PPI
MS.gene21635	MS.gene42272	PPI
MS.gene42272	MS.gene95919	PPI
MS.gene96428	MS.gene42272	PPI
MS.gene024647	MS.gene42272	PPI
MS.gene81916	MS.gene42272	PPI
MS.gene057880	MS.gene42272	PPI
MS.gene07235	MS.gene42272	PPI
MS.gene95200	MS.gene42272	PPI
MS.gene95918	MS.gene42272	PPI
MS.gene51810	MS.gene42272	PPI
MS.gene02701	MS.gene42272	PPI
MS.gene29940	MS.gene42272	PPI
MS.gene42272	MS.gene044195	PPI
MS.gene070498	MS.gene42272	PPI
MS.gene50877	MS.gene42272	PPI
MS.gene22342	MS.gene42272	PPI
MS.gene42272	MS.gene026233	PPI
MS.gene020482	MS.gene42272	PPI
MS.gene019323	MS.gene42272	PPI
MS.gene81610	MS.gene42272	PPI
MS.gene014436	MS.gene42272	PPI
MS.gene88559	MS.gene42272	PPI
MS.gene68770	MS.gene42272	PPI
MS.gene88560	MS.gene42272	PPI
MS.gene020485	MS.gene42272	PPI
MS.gene42640	MS.gene42272	PPI
MS.gene21633	MS.gene42272	PPI
MS.gene064746	MS.gene42272	PPI
MS.gene42272	MS.gene014234	PPI
MS.gene063734	MS.gene42272	PPI
MS.gene81918	MS.gene42272	PPI
MS.gene69412	MS.gene42272	PPI
MS.gene72272	MS.gene42272	PPI
MS.gene063122	MS.gene42272	PPI
MS.gene68175	MS.gene42272	PPI
MS.gene42272	MS.gene026232	PPI
MS.gene072765	MS.gene42272	PPI
MS.gene072763	MS.gene42272	PPI
MS.gene42272	MS.gene057924	PPI
MS.gene42272	MS.gene063734	PPI
MS.gene057923	MS.gene42272	PPI
MS.gene42272	MS.gene015691	PPI
MS.gene014960	MS.gene42272	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene42272.t1	MTR_3g113720	99.622	529	2	0	1	529	1	529	0.0	1095
MS.gene42272.t1	MTR_8g075990	62.330	515	191	1	14	528	23	534	0.0	638
MS.gene42272.t1	MTR_5g085730	44.798	471	246	9	58	519	32	497	6.59e-138	409
MS.gene42272.t1	MTR_8g099410	46.482	469	237	10	58	518	29	491	8.68e-137	406
MS.gene42272.t1	MTR_4g074960	43.579	475	249	7	58	521	29	495	5.26e-136	407
MS.gene42272.t1	MTR_8g099410	46.482	469	237	10	58	518	29	491	2.81e-135	406
MS.gene42272.t1	MTR_5g093590	44.304	474	243	10	58	518	35	500	7.75e-132	393
MS.gene42272.t1	MTR_3g080190	43.524	471	252	9	58	519	41	506	7.86e-130	389
MS.gene42272.t1	MTR_5g009970	42.521	468	248	6	58	519	42	494	1.58e-128	384
MS.gene42272.t1	MTR_1g037340	44.563	469	239	10	58	518	26	481	1.40e-126	379
MS.gene42272.t1	MTR_5g010000	43.644	472	245	7	58	523	41	497	6.79e-125	375
MS.gene42272.t1	MTR_3g105230	41.850	454	242	7	58	506	31	467	1.15e-123	371
MS.gene42272.t1	MTR_3g117500	42.827	474	250	9	56	519	23	485	3.21e-122	368
MS.gene42272.t1	MTR_3g080810	42.004	469	253	8	56	516	34	491	1.00e-121	367
MS.gene42272.t1	MTR_3g023740	41.453	468	252	7	58	520	31	481	1.15e-118	358
MS.gene42272.t1	MTR_2g028480	41.698	530	267	14	14	518	77	589	3.78e-114	351
MS.gene42272.t1	MTR_4g035955	40.977	471	255	9	53	516	10	464	1.21e-113	345
MS.gene42272.t1	MTR_5g009970	41.452	427	230	5	98	519	9	420	3.14e-113	342
MS.gene42272.t1	MTR_8g104820	41.300	477	247	11	56	516	29	488	3.97e-113	345
MS.gene42272.t1	MTR_3g010330	41.880	468	248	10	58	516	26	478	5.67e-112	341
MS.gene42272.t1	MTR_4g035930	40.343	466	255	8	58	516	16	465	2.79e-110	336
MS.gene42272.t1	MTR_3g082440	39.212	533	285	15	14	524	82	597	6.79e-106	330
MS.gene42272.t1	MTR_5g009970	40.686	408	222	5	117	519	1	393	2.49e-104	318
MS.gene42272.t1	MTR_1g088190	38.923	483	257	10	51	525	33	485	4.53e-103	318
MS.gene42272.t1	MTR_4g035975	38.703	478	260	12	56	516	26	487	1.42e-101	315
MS.gene42272.t1	MTR_3g090540	36.981	530	282	18	18	519	76	581	3.77e-95	301
MS.gene42272.t1	MTR_5g009970	40.476	336	180	5	189	519	5	325	2.29e-79	252
MS.gene42272.t1	MTR_1g088190	39.557	316	158	8	51	362	33	319	1.06e-58	198
MS.gene42272.t1	MTR_1g037320	45.912	159	86	0	117	275	1	159	6.44e-38	141
MS.gene42272.t1	MTR_1g037320	45.082	122	61	3	400	516	169	289	1.82e-27	112
MS.gene42272.t1	MTR_4g128810	44.586	157	86	1	373	528	187	343	6.77e-37	140
MS.gene42272.t1	MTR_7g108925	37.576	165	98	2	366	526	43	206	2.20e-34	129
MS.gene42272.t1	MTR_0393s0050	38.931	131	74	3	375	500	29	158	7.86e-23	96.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene42272.t1	AT1G19940	68.371	528	154	4	1	528	1	515	0.0	709
MS.gene42272.t1	AT1G19940	68.371	528	154	4	1	528	1	515	0.0	709
MS.gene42272.t1	AT1G75680	69.187	529	157	5	1	528	1	524	0.0	708
MS.gene42272.t1	AT1G19940	65.952	420	130	4	1	420	1	407	0.0	546
MS.gene42272.t1	AT4G11050	45.798	476	244	9	58	525	27	496	1.60e-139	414
MS.gene42272.t1	AT4G11050	46.008	476	243	10	58	525	27	496	9.61e-139	415
MS.gene42272.t1	AT4G11050	46.008	476	243	10	58	525	27	496	1.07e-138	415
MS.gene42272.t1	AT1G64390	44.676	479	251	9	58	528	26	498	1.49e-136	409
MS.gene42272.t1	AT2G32990	43.644	472	244	10	58	516	40	502	3.69e-131	392
MS.gene42272.t1	AT2G44540	44.397	473	247	7	52	518	28	490	1.65e-128	384
MS.gene42272.t1	AT2G44550	45.435	471	238	9	53	516	29	487	2.93e-128	383
MS.gene42272.t1	AT2G44560	45.032	473	244	8	52	518	28	490	4.58e-126	378
MS.gene42272.t1	AT1G48930	46.055	469	235	7	58	516	31	491	3.91e-125	380
MS.gene42272.t1	AT2G44570	42.887	471	252	9	55	518	31	491	3.72e-122	368
MS.gene42272.t1	AT4G23560	42.463	471	251	6	57	522	23	478	2.12e-119	360
MS.gene42272.t1	AT1G71380	42.706	473	248	9	52	516	19	476	1.11e-118	358
MS.gene42272.t1	AT4G02290	41.667	468	255	9	56	516	51	507	1.11e-118	360
MS.gene42272.t1	AT1G02800	41.983	474	255	10	55	521	41	501	6.09e-118	357
MS.gene42272.t1	AT3G43860	41.845	466	249	7	58	518	35	483	3.02e-117	355
MS.gene42272.t1	AT3G43860	41.845	466	249	7	58	518	35	483	3.02e-117	355
MS.gene42272.t1	AT1G22880	42.616	474	249	9	58	523	25	483	5.03e-117	354
MS.gene42272.t1	AT4G09740	42.340	470	251	7	58	522	24	478	6.64e-117	353
MS.gene42272.t1	AT4G39010	40.764	471	259	9	56	516	28	488	6.45e-115	349
MS.gene42272.t1	AT1G23210	40.000	470	254	9	58	515	29	482	5.71e-114	347
MS.gene42272.t1	AT1G70710	40.127	471	252	9	58	515	29	482	6.54e-114	347
MS.gene42272.t1	AT4G39000	39.496	476	268	9	51	516	19	484	5.85e-111	339
MS.gene42272.t1	AT5G49720	40.566	530	273	14	14	518	74	586	3.71e-108	336
MS.gene42272.t1	AT4G24260	43.149	489	244	14	58	522	109	587	9.34e-105	327
MS.gene42272.t1	AT4G38990	37.654	486	268	12	51	516	17	487	1.87e-100	312
MS.gene42272.t1	AT1G65610	36.484	529	298	13	14	521	82	593	3.10e-100	315
MS.gene42272.t1	AT1G22880	41.546	414	220	8	117	523	1	399	3.54e-99	305
MS.gene42272.t1	AT4G02290	40.148	406	226	8	117	516	1	395	1.39e-95	296
MS.gene42272.t1	AT2G44570	41.514	383	212	7	55	435	31	403	6.39e-89	279
MS.gene42272.t1	AT4G39010	39.516	372	209	8	56	421	28	389	8.75e-83	263
MS.gene42272.t1	AT1G22880	44.728	313	155	7	58	366	25	323	8.63e-71	230
MS.gene42272.t1	AT4G24260	42.119	387	193	13	58	420	109	488	7.89e-70	232
MS.gene42272.t1	AT4G24260	44.164	317	150	11	58	352	109	420	1.63e-63	214
MS.gene42272.t1	AT4G38990	36.311	347	183	7	51	392	17	330	1.44e-59	201

Find 123 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTTATTGCGTTTGTGATTC+TGG	0.168400	3.2:-90175401	MS.gene42272:CDS
GAGCATAATCTTCTCCATTT+TGG	0.188257	3.2:+90174105	None:intergenic
GGAGAAGATTATGCTCAATT+TGG	0.211354	3.2:-90174098	MS.gene42272:CDS
TATTATAACTCAACTGGATA+TGG	0.212670	3.2:-90174203	MS.gene42272:CDS
TTTATATAGATGGTCTGATA+TGG	0.236900	3.2:-90173245	MS.gene42272:intron
ATGAGACTTACATTGATTCT+AGG	0.242483	3.2:-90171956	MS.gene42272:CDS
GGAGAATGTTCTGTATATTC+AGG	0.309453	3.2:-90174612	MS.gene42272:intron
TCGTGGGCAATTCTAGAATA+TGG	0.312428	3.2:-90174722	MS.gene42272:CDS
AGCAATGGCATCAGCATCTT+TGG	0.319777	3.2:-90174345	MS.gene42272:CDS
GGAGGACCGGGAACCGGTTC+GGG	0.321906	3.2:+90175313	None:intergenic
TTTGTGGCTGTTGGAGAGTC+TGG	0.335910	3.2:+90173600	None:intergenic
GAGAGGGGATTCGGCTCTTA+AGG	0.338315	3.2:-90174843	MS.gene42272:CDS
CAGTATGTGACTGGCCAAAA+TGG	0.350134	3.2:-90174119	MS.gene42272:CDS
GCCGGGGATCACATGAAGTT+TGG	0.352977	3.2:-90174776	MS.gene42272:CDS
CTTTCAAGTTCATATGGTTC+CGG	0.354604	3.2:-90173672	MS.gene42272:CDS
GATAAACCCGAACCGGTTCC+CGG	0.365719	3.2:-90175319	MS.gene42272:CDS
TTATAATATGTCGCAACTTC+AGG	0.368599	3.2:+90174218	None:intergenic
TGTCCCAACTGAACCAGGTT+GGG	0.383206	3.2:+90174072	None:intergenic
AGGAGGACCGGGAACCGGTT+CGG	0.385546	3.2:+90175312	None:intergenic
ATTATAACTCAACTGGATAT+GGG	0.400764	3.2:-90174202	MS.gene42272:CDS
AAGGGCCTTTCAAGTTCATA+TGG	0.416309	3.2:-90173678	MS.gene42272:CDS
TCCCACAATTTGTGCATCAC+AGG	0.417030	3.2:-90172097	MS.gene42272:CDS
TCTCGTCAATGCTCATCCTT+CGG	0.427984	3.2:-90174633	MS.gene42272:CDS
AATAAGTTGGAGAGGGGATT+CGG	0.430660	3.2:-90174852	MS.gene42272:CDS
AATGGATGCTGTTGGCCAAT+TGG	0.431030	3.2:-90174693	MS.gene42272:CDS
TTCCAGGCTGATTACGTGTT+GGG	0.431458	3.2:-90172167	MS.gene42272:intron
TTCAGCTGCAACATCTGATC+CGG	0.435202	3.2:+90174376	None:intergenic
ATCAATGGCACCAGGAGGAC+CGG	0.439759	3.2:+90175300	None:intergenic
GCGACATATTATAACTCAAC+TGG	0.441782	3.2:-90174209	MS.gene42272:CDS
CCGAATCCCAATGTAGCTAC+TGG	0.444550	3.2:-90172005	MS.gene42272:CDS
GTTGCAAGGATGGGTGGCAG+TGG	0.446186	3.2:-90172043	MS.gene42272:CDS
TCTAGAATATGGAGATCAAA+TGG	0.446875	3.2:-90174711	MS.gene42272:CDS
ATCTAGAGTAAGCTTCTTCA+AGG	0.446995	3.2:-90173703	MS.gene42272:CDS
AGCTGAAACTGCAGCAGCAA+TGG	0.448020	3.2:-90174360	MS.gene42272:CDS
AAGTTTAGTCACCACATCTT+CGG	0.449573	3.2:-90171871	MS.gene42272:CDS
GCACCAGGAGGACCGGGAAC+CGG	0.455702	3.2:+90175307	None:intergenic
TCGAGACTTTGCCAGATCTC+AGG	0.456961	3.2:-90173091	MS.gene42272:intron
TTATATAGATGGTCTGATAT+GGG	0.457104	3.2:-90173244	MS.gene42272:intron
AGTTGGGACAACAAGCTTGC+CGG	0.460646	3.2:-90174059	MS.gene42272:CDS
CAACACTTGTGATCTGCAAC+AGG	0.466398	3.2:+90174458	None:intergenic
AATCTTGTGCTGGTTCCAAT+TGG	0.470000	3.2:+90174678	None:intergenic
TAGAGAACAACAAAATAAGT+TGG	0.470544	3.2:-90174865	MS.gene42272:CDS
CCAGTAGCTACATTGGGATT+CGG	0.470664	3.2:+90172005	None:intergenic
CCCTGTGATGCACAAATTGT+GGG	0.472083	3.2:+90172096	None:intergenic
CTCAATTTGGAAGCCCAACC+TGG	0.472205	3.2:-90174085	MS.gene42272:CDS
GTCTGATATGGGTGAGTGAA+TGG	0.473028	3.2:-90173233	MS.gene42272:CDS
GCTAAGAATGCAGATGCAAC+AGG	0.473355	3.2:+90173195	None:intergenic
ATGAATGCATACCTGAGATC+TGG	0.474526	3.2:+90173080	None:intergenic
CTTGTTGTCCCAACTGAACC+AGG	0.475271	3.2:+90174067	None:intergenic
AGGATACGTTCACTTGTAAG+AGG	0.479664	3.2:+90174402	None:intergenic
CAAAAGGAGGATGTTGTGGT+TGG	0.485199	3.2:-90175423	MS.gene42272:CDS
TACTGCCTCGGTGCTATCGT+GGG	0.488542	3.2:-90174738	MS.gene42272:CDS
GAACCGGTTCCCGGTCCTCC+TGG	0.489943	3.2:-90175310	MS.gene42272:CDS
GTAGCTACTGGAGCACTTGT+TGG	0.494083	3.2:-90171993	MS.gene42272:CDS
GTAAGCTTCTTCAAGGCAAA+GGG	0.494576	3.2:-90173696	MS.gene42272:CDS
AACAACAAAATAAGTTGGAG+AGG	0.494998	3.2:-90174860	MS.gene42272:CDS
AAATTCAGATAAACCCGAAC+CGG	0.495107	3.2:-90175326	MS.gene42272:CDS
CAAAAGGAATGTATGATGCC+GGG	0.495516	3.2:-90174793	MS.gene42272:CDS
GCAGATTTAGATCTAACAAA+AGG	0.496053	3.2:-90174809	MS.gene42272:CDS
TCGAAGATCTGATGGTTTGA+AGG	0.496987	3.2:+90173110	None:intergenic
GAAGCCCAACCTGGTTCAGT+TGG	0.502198	3.2:-90174076	MS.gene42272:CDS
CCCACAATTTGTGCATCACA+GGG	0.503590	3.2:-90172096	MS.gene42272:CDS
GTGATTCTGGCTCTTGTGGT+CGG	0.505371	3.2:-90175388	MS.gene42272:CDS
AAGCCCAACCTGGTTCAGTT+GGG	0.506162	3.2:-90174075	MS.gene42272:CDS
ACAAAAGGAATGTATGATGC+CGG	0.506505	3.2:-90174794	MS.gene42272:CDS
TATAACAGTGCTGTCATAGT+TGG	0.509805	3.2:-90171903	MS.gene42272:CDS
TGCAACATCTGATCCGGGAC+AGG	0.511750	3.2:+90174382	None:intergenic
GCTACTGGAGCACTTGTTGG+TGG	0.515300	3.2:-90171990	MS.gene42272:CDS
ACCTGTAGCATGGTAGAGCC+AGG	0.516769	3.2:+90174157	None:intergenic
TTGTCCCAACTGAACCAGGT+TGG	0.523981	3.2:+90174071	None:intergenic
AACCAGCACAAGATTCTCTC+AGG	0.525412	3.2:-90174670	MS.gene42272:CDS
TAGTTTAGGAGAAGGATTGA+AGG	0.527196	3.2:+90171847	None:intergenic
AGCTCTTCATACCTGAGTTC+CGG	0.531252	3.2:+90174040	None:intergenic
CACCTGAGAGAATCTTGTGC+TGG	0.533013	3.2:+90174668	None:intergenic
CCCCTGTGATGCACAAATTG+TGG	0.536207	3.2:+90172095	None:intergenic
AGTGCTCCAGTAGCTACATT+GGG	0.536888	3.2:+90171999	None:intergenic
CAACAAGCTTGCCGGAACTC+AGG	0.539769	3.2:-90174051	MS.gene42272:intron
TCCTACCTTCAGTATGTGAC+TGG	0.540197	3.2:-90174128	MS.gene42272:CDS
CTTCCAGGCTGATTACGTGT+TGG	0.540229	3.2:-90172168	MS.gene42272:intron
CGGAACCATATGAACTTGAA+AGG	0.540605	3.2:+90173673	None:intergenic
AAGTGCTCCAGTAGCTACAT+TGG	0.543749	3.2:+90171998	None:intergenic
GCAAAGTCTCGAAGATCTGA+TGG	0.544007	3.2:+90173102	None:intergenic
TTACTGCCTCGGTGCTATCG+TGG	0.544348	3.2:-90174739	MS.gene42272:CDS
ATGTAAGTCTCATTTAAGAA+AGG	0.549620	3.2:+90171966	None:intergenic
GTTTGTGATTCTGGCTCTTG+TGG	0.550904	3.2:-90175392	MS.gene42272:CDS
AGTAAGCTTCTTCAAGGCAA+AGG	0.552883	3.2:-90173697	MS.gene42272:CDS
ACCTGGCTCTACCATGCTAC+AGG	0.553331	3.2:-90174158	MS.gene42272:CDS
ACCAAACTTCATGTGATCCC+CGG	0.556653	3.2:+90174775	None:intergenic
CAAGTGAACGTATCCTGTCC+CGG	0.560701	3.2:-90174395	MS.gene42272:CDS
GGATTGAAGGGCCGAAGATG+TGG	0.569561	3.2:+90171860	None:intergenic
CTGTTGCAGATCACAAGTGT+TGG	0.571688	3.2:-90174457	MS.gene42272:CDS
TCAATGGCACCAGGAGGACC+GGG	0.573055	3.2:+90175301	None:intergenic
ACAGCACTGTTATATGTGCT+TGG	0.573334	3.2:+90171912	None:intergenic
GGGGATTCGGCTCTTAAGGA+TGG	0.573397	3.2:-90174839	MS.gene42272:CDS
AGTTTAGGAGAAGGATTGAA+GGG	0.578741	3.2:+90171848	None:intergenic
ACATACTATAGTTTAGGAGA+AGG	0.578891	3.2:+90171839	None:intergenic
TTATAACTCAACTGGATATG+GGG	0.582247	3.2:-90174201	MS.gene42272:CDS
AAGACCACACATTACAGCCT+CGG	0.582653	3.2:+90173626	None:intergenic
ACAACAAAATAAGTTGGAGA+GGG	0.586545	3.2:-90174859	MS.gene42272:CDS
AGCTACATTGGGATTCGGAT+CGG	0.590300	3.2:+90172010	None:intergenic
TCTAGGAACAATTCTATGCA+AGG	0.591369	3.2:-90171939	MS.gene42272:CDS
TCAGCTGCAACATCTGATCC+GGG	0.591508	3.2:+90174377	None:intergenic
CGTTCCTCAGTAATTAACTC+AGG	0.597205	3.2:+90174428	None:intergenic
AGATCAAAAGGAGGATGTTG+TGG	0.599433	3.2:-90175427	MS.gene42272:CDS
CAGCACAAGATTCTCTCAGG+TGG	0.615600	3.2:-90174667	MS.gene42272:CDS
TTTGGCCAGTCACATACTGA+AGG	0.616951	3.2:+90174123	None:intergenic
AGGAATCATCACCTGTAGCA+TGG	0.618916	3.2:+90174147	None:intergenic
AAACTGGTTGCAAGGATGGG+TGG	0.621140	3.2:-90172049	MS.gene42272:CDS
AAAAGGAATGTATGATGCCG+GGG	0.628087	3.2:-90174792	MS.gene42272:CDS
GGATACGTTCACTTGTAAGA+GGG	0.631666	3.2:+90174403	None:intergenic
GGAGATCAAATGGATGCTGT+TGG	0.641613	3.2:-90174701	MS.gene42272:CDS
TCCGCCGAGGCTGTAATGTG+TGG	0.641659	3.2:-90173630	MS.gene42272:CDS
ACCAGAAAACTCATATGCTG+AGG	0.647665	3.2:+90172137	None:intergenic
ACCGAGGCAGTAAAAGCCAT+AGG	0.648080	3.2:+90174749	None:intergenic
CAACAAAATAAGTTGGAGAG+GGG	0.657191	3.2:-90174858	MS.gene42272:CDS
ATATACAGAACATTCTCCGA+AGG	0.657437	3.2:+90174617	None:intergenic
GCCAGTCACATACTGAAGGT+AGG	0.663540	3.2:+90174127	None:intergenic
ACCACACATTACAGCCTCGG+CGG	0.674391	3.2:+90173629	None:intergenic
GATACGTTCACTTGTAAGAG+GGG	0.676663	3.2:+90174404	None:intergenic
CCACAATTTGTGCATCACAG+GGG	0.697583	3.2:-90172095	MS.gene42272:CDS
TAGACCTGAGTTAATTACTG+AGG	0.715470	3.2:-90174432	MS.gene42272:CDS
AAATTATAGAAAATCCGCCG+AGG	0.730261	3.2:-90173643	MS.gene42272:CDS
AATTGCCCACGATAGCACCG+AGG	0.782103	3.2:+90174733	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAGAAAAATGTATAAATAAA+GGG	+	chr3.2:90174516-90174535	None:intergenic	10.0%
!!	ATATATAAAAAAAAACACTT+CGG	+	chr3.2:90173360-90173379	None:intergenic	10.0%
!!	TAAGAAAAATGTATAAATAA+AGG	+	chr3.2:90174517-90174536	None:intergenic	10.0%
!!	TAGAAATATATTACTAAAAA+TGG	+	chr3.2:90173992-90174011	None:intergenic	10.0%
!!!	TTTAATGTTATTGATTTAAT+TGG	+	chr3.2:90174611-90174630	None:intergenic	10.0%
!!	AAAATTGTGTCAATTAAATT+GGG	-	chr3.2:90174552-90174571	MS.gene42272:intron	15.0%
!!	AGAAAAATGTATAAATAAAG+GGG	+	chr3.2:90174515-90174534	None:intergenic	15.0%
!!	ATAAGTTAGTAGTATTAATT+AGG	+	chr3.2:90174770-90174789	None:intergenic	15.0%
!!	ATTTATCTGACATTAAATAA+AGG	-	chr3.2:90174950-90174969	MS.gene42272:intron	15.0%
!!	GTAAATTCTTCTTATATTAA+GGG	+	chr3.2:90174267-90174286	None:intergenic	15.0%
!!	TAAGTTAGTAGTATTAATTA+GGG	+	chr3.2:90174769-90174788	None:intergenic	15.0%
!!	TTTATCTGACATTAAATAAA+GGG	-	chr3.2:90174951-90174970	MS.gene42272:intron	15.0%
!!!	TTCTTTTTCTTTTATATAGA+TGG	-	chr3.2:90174038-90174057	MS.gene42272:intron	15.0%
!!	AAAGTGGAATATATTGTATT+GGG	+	chr3.2:90174492-90174511	None:intergenic	20.0%
!!	AAGTTAGTAGTATTAATTAG+GGG	+	chr3.2:90174768-90174787	None:intergenic	20.0%
!!	AGTTGTATTGAAAATTGAAA+TGG	+	chr3.2:90174419-90174438	None:intergenic	20.0%
!!	CAAAATTGTGTCAATTAAAT+TGG	-	chr3.2:90174551-90174570	MS.gene42272:intron	20.0%
!!	CTAATCAGATTATAAGTTAA+GGG	+	chr3.2:90173917-90173936	None:intergenic	20.0%
!!	GGACAAAAATAAAATCAAAT+GGG	+	chr3.2:90174686-90174705	None:intergenic	20.0%
!!	GGTAAATTCTTCTTATATTA+AGG	+	chr3.2:90174268-90174287	None:intergenic	20.0%
!!	GTTGTATTGAAAATTGAAAT+GGG	+	chr3.2:90174418-90174437	None:intergenic	20.0%
!!	TAGAATTTGTAAACAAGATT+CGG	+	chr3.2:90173280-90173299	None:intergenic	20.0%
!!	TTGTTTACAAATTCTAAACT+AGG	-	chr3.2:90173284-90173303	MS.gene42272:intron	20.0%
!!	TTTAATACACATACAAACAA+AGG	-	chr3.2:90174811-90174830	MS.gene42272:CDS	20.0%
!!!	AAAACAGTTATTTACTTTTG+CGG	-	chr3.2:90173020-90173039	MS.gene42272:intron	20.0%
!!!	AATAGTTTTATTAGATAGTC+TGG	-	chr3.2:90173944-90173963	MS.gene42272:intron	20.0%
!!!	ATAATCCTTTTTTTCATTCT+CGG	-	chr3.2:90172074-90172093	MS.gene42272:CDS	20.0%
!!!	ATCTGAATCACATTTTATAT+TGG	+	chr3.2:90174162-90174181	None:intergenic	20.0%
!!!	GACACTTTTTTTTAGAAAAT+GGG	+	chr3.2:90174382-90174401	None:intergenic	20.0%
!!!	GGAGTTGTATTTTTTTTTTT+TGG	-	chr3.2:90174303-90174322	MS.gene42272:CDS	20.0%
!!!	TCTGAATCACATTTTATATT+GGG	+	chr3.2:90174161-90174180	None:intergenic	20.0%
!	AAGAAATGTGAAAAATGCAA+AGG	-	chr3.2:90174893-90174912	MS.gene42272:intron	25.0%
!	AATGCTTTCATGTATATACT+AGG	-	chr3.2:90173482-90173501	MS.gene42272:intron	25.0%
!	AATTTGTGTATTCAATGCAT+TGG	-	chr3.2:90173813-90173832	MS.gene42272:intron	25.0%
!	ACGCACAATTTCTTATAATA+GGG	-	chr3.2:90175045-90175064	MS.gene42272:intron	25.0%
!	AGAAATGTGAAAAATGCAAA+GGG	-	chr3.2:90174894-90174913	MS.gene42272:intron	25.0%
!	ATGCATCTAGTAATTTGAAA+AGG	+	chr3.2:90174722-90174741	None:intergenic	25.0%
!	ATGCTTTCATGTATATACTA+GGG	-	chr3.2:90173483-90173502	MS.gene42272:intron	25.0%
!	ATGTAAGTCTCATTTAAGAA+AGG	+	chr3.2:90175330-90175349	None:intergenic	25.0%
!	ATTATAACTCAACTGGATAT+GGG	-	chr3.2:90173091-90173110	MS.gene42272:intron	25.0%
!	CAAAAATAAAATCAAATGGG+TGG	+	chr3.2:90174683-90174702	None:intergenic	25.0%
!	GAAAGTGGAATATATTGTAT+TGG	+	chr3.2:90174493-90174512	None:intergenic	25.0%
!	GCTAATCAGATTATAAGTTA+AGG	+	chr3.2:90173918-90173937	None:intergenic	25.0%
!	GGGACAAAAATAAAATCAAA+TGG	+	chr3.2:90174687-90174706	None:intergenic	25.0%
!	TACGCACAATTTCTTATAAT+AGG	-	chr3.2:90175044-90175063	MS.gene42272:intron	25.0%
!	TAGAGAACAACAAAATAAGT+TGG	-	chr3.2:90172428-90172447	MS.gene42272:intron	25.0%
!	TATTATAACTCAACTGGATA+TGG	-	chr3.2:90173090-90173109	MS.gene42272:intron	25.0%
!	TGCATCTAGTAATTTGAAAA+GGG	+	chr3.2:90174721-90174740	None:intergenic	25.0%
!	TTATATAGATGGTCTGATAT+GGG	-	chr3.2:90174049-90174068	MS.gene42272:intron	25.0%
!	TTCATTTATCAAAATCGATG+TGG	-	chr3.2:90172800-90172819	MS.gene42272:intron	25.0%
!	TTGTGAAATGCAAGAAATAA+AGG	+	chr3.2:90172103-90172122	None:intergenic	25.0%
!	TTTATATAGATGGTCTGATA+TGG	-	chr3.2:90174048-90174067	MS.gene42272:intron	25.0%
!!	CTGACTTGATATTAACTAAT+GGG	-	chr3.2:90173753-90173772	MS.gene42272:intron	25.0%
!!	TATTAATTAGGGGTATGTTT+AGG	+	chr3.2:90174758-90174777	None:intergenic	25.0%
!!	TCTGACTTGATATTAACTAA+TGG	-	chr3.2:90173752-90173771	MS.gene42272:intron	25.0%
!!!	AAGAAATTGTGCGTATTTTT+TGG	+	chr3.2:90175039-90175058	None:intergenic	25.0%
!!!	AGAAGCATATTTTTGATCAA+TGG	+	chr3.2:90172011-90172030	None:intergenic	25.0%
!!!	AGTAAGTAGAAGTATCATTT+AGG	+	chr3.2:90173446-90173465	None:intergenic	25.0%
!!!	GGACACTTTTTTTTAGAAAA+TGG	+	chr3.2:90174383-90174402	None:intergenic	25.0%
!!!	TAATGTTTTAAAAACCGAAC+TGG	-	chr3.2:90172194-90172213	MS.gene42272:intron	25.0%
!!!	TGGTTTTGAAAACATTGTTT+TGG	-	chr3.2:90172333-90172352	MS.gene42272:intron	25.0%
!!!	TTTTTTTTTGGTACAGATCA+AGG	-	chr3.2:90174315-90174334	MS.gene42272:CDS	25.0%
	AAAACTTGTCTAATACTTCC+AGG	-	chr3.2:90175110-90175129	MS.gene42272:intron	30.0%
	AAATGTGAAAAATGCAAAGG+GGG	-	chr3.2:90174896-90174915	MS.gene42272:intron	30.0%
	AGAGAAAAATCGAGATCAAA+AGG	-	chr3.2:90171854-90171873	MS.gene42272:CDS	30.0%
	ATAATCCTTCTTCTTAATGC+AGG	-	chr3.2:90173560-90173579	MS.gene42272:intron	30.0%
	ATTTCTTGCATTTCACAATG+TGG	-	chr3.2:90172105-90172124	MS.gene42272:CDS	30.0%
	CATACAAACAAAGGACAATT+TGG	-	chr3.2:90174820-90174839	MS.gene42272:CDS	30.0%
	CATCTAGTAATTTGAAAAGG+GGG	+	chr3.2:90174719-90174738	None:intergenic	30.0%
	GAAATGTGAAAAATGCAAAG+GGG	-	chr3.2:90174895-90174914	MS.gene42272:intron	30.0%
	GCAGATTTAGATCTAACAAA+AGG	-	chr3.2:90172484-90172503	MS.gene42272:intron	30.0%
	GCATCTAGTAATTTGAAAAG+GGG	+	chr3.2:90174720-90174739	None:intergenic	30.0%
	GTCTATTCTATGTAATGTGT+AGG	+	chr3.2:90173395-90173414	None:intergenic	30.0%
	TAGGATAAGATAATGCCATA+AGG	+	chr3.2:90173427-90173446	None:intergenic	30.0%
	TGCTTTCATGTATATACTAG+GGG	-	chr3.2:90173484-90173503	MS.gene42272:intron	30.0%
	TGTATAAATAAAGGGGAAAG+TGG	+	chr3.2:90174508-90174527	None:intergenic	30.0%
	TTATAACTCAACTGGATATG+GGG	-	chr3.2:90173092-90173111	MS.gene42272:CDS	30.0%
	TTATAATATGTCGCAACTTC+AGG	+	chr3.2:90173078-90173097	None:intergenic	30.0%
	TTGTGTCAATTAAATTGGGA+CGG	-	chr3.2:90174556-90174575	MS.gene42272:intron	30.0%
	TTTACCAAAATCACAGATCA+AGG	-	chr3.2:90174282-90174301	MS.gene42272:CDS	30.0%
!	AACAACAAAATAAGTTGGAG+AGG	-	chr3.2:90172433-90172452	MS.gene42272:intron	30.0%
!	ACAACAAAATAAGTTGGAGA+GGG	-	chr3.2:90172434-90172453	MS.gene42272:intron	30.0%
!	CGGATTTTCTATAATTTTGG+AGG	+	chr3.2:90173647-90173666	None:intergenic	30.0%
!	TCTAGAATATGGAGATCAAA+TGG	-	chr3.2:90172582-90172601	MS.gene42272:intron	30.0%
!	TTCTGTATATTCAGGTTAGT+TGG	-	chr3.2:90172689-90172708	MS.gene42272:intron	30.0%
!	TTGAAATGGGTCAGTTATTT+TGG	+	chr3.2:90174405-90174424	None:intergenic	30.0%
!	TTTTTGTAGAATACTCTCTC+TGG	-	chr3.2:90174241-90174260	MS.gene42272:CDS	30.0%
!!	AATACTTTGGTGGGTTATTT+AGG	+	chr3.2:90172289-90172308	None:intergenic	30.0%
!!	ATGAGACTTACATTGATTCT+AGG	-	chr3.2:90175337-90175356	MS.gene42272:CDS	30.0%
!!	CAATGTGGTTGGTTTATTAT+AGG	-	chr3.2:90172120-90172139	MS.gene42272:CDS	30.0%
!!	TGAAATGGGTCAGTTATTTT+GGG	+	chr3.2:90174404-90174423	None:intergenic	30.0%
!!	TTTTCTATAATTTTGGAGGC+CGG	+	chr3.2:90173643-90173662	None:intergenic	30.0%
!!!	AATTTTCATAAAAAGTGCCC+CGG	+	chr3.2:90173797-90173816	None:intergenic	30.0%
!!!	AGTTTTATTAGATAGTCTGG+AGG	-	chr3.2:90173947-90173966	MS.gene42272:intron	30.0%
	AAATTATAGAAAATCCGCCG+AGG	-	chr3.2:90173650-90173669	MS.gene42272:CDS	35.0%
	AAATTCAGATAAACCCGAAC+CGG	-	chr3.2:90171967-90171986	MS.gene42272:CDS	35.0%
	AACCGAACTGGATATTGAAT+CGG	-	chr3.2:90172206-90172225	MS.gene42272:intron	35.0%
	AAGTTTAGTCACCACATCTT+CGG	-	chr3.2:90175422-90175441	MS.gene42272:CDS	35.0%
	AATGTGAAAAATGCAAAGGG+GGG	-	chr3.2:90174897-90174916	MS.gene42272:intron	35.0%
	ACAAAAGGAATGTATGATGC+CGG	-	chr3.2:90172499-90172518	MS.gene42272:intron	35.0%
	AGAAAATGGGTCAGTTATTC+CGG	+	chr3.2:90174369-90174388	None:intergenic	35.0%
	ATAGACTCAATCAAGCCTTA+TGG	-	chr3.2:90173409-90173428	MS.gene42272:intron	35.0%
	ATAGGGATCAGAGATAGTAT+CGG	-	chr3.2:90175062-90175081	MS.gene42272:intron	35.0%
	ATATACAGAACATTCTCCGA+AGG	+	chr3.2:90172679-90172698	None:intergenic	35.0%
	ATCAAGTCAGATAGCATTCA+AGG	+	chr3.2:90173743-90173762	None:intergenic	35.0%
	ATGCTACGGTTCAAATACTT+TGG	+	chr3.2:90172302-90172321	None:intergenic	35.0%
	ATTCCTGCTAATGCAAAAAC+TGG	-	chr3.2:90175228-90175247	MS.gene42272:intron	35.0%
	CAAAACCTGCATTAAGAAGA+AGG	+	chr3.2:90173568-90173587	None:intergenic	35.0%
	CAAATGGGTGGTTACATTAA+GGG	+	chr3.2:90174671-90174690	None:intergenic	35.0%
	CCAAATCAAATCACATGCTA+CGG	+	chr3.2:90172316-90172335	None:intergenic	35.0%
	GAAAAATCGAGATCAAAAGG+AGG	-	chr3.2:90171857-90171876	MS.gene42272:CDS	35.0%
	GCGACATATTATAACTCAAC+TGG	-	chr3.2:90173084-90173103	MS.gene42272:intron	35.0%
	GGAGAAGATTATGCTCAATT+TGG	-	chr3.2:90173195-90173214	MS.gene42272:CDS	35.0%
	GGAGAATGTTCTGTATATTC+AGG	-	chr3.2:90172681-90172700	MS.gene42272:intron	35.0%
	GGAGGTAGTATAAAATTGAG+TGG	-	chr3.2:90174577-90174596	MS.gene42272:intron	35.0%
	GGTAACCGAGAATGAAAAAA+AGG	+	chr3.2:90172082-90172101	None:intergenic	35.0%
	GTTTATTGCGTTTGTGATTC+TGG	-	chr3.2:90171892-90171911	MS.gene42272:CDS	35.0%
	TAATGCAAAAACTGGTTGCA+AGG	-	chr3.2:90175236-90175255	MS.gene42272:intron	35.0%
	TACGGTTCAAATACTTTGGT+GGG	+	chr3.2:90172298-90172317	None:intergenic	35.0%
	TAGACCTGAGTTAATTACTG+AGG	-	chr3.2:90172861-90172880	MS.gene42272:intron	35.0%
	TATAACAGTGCTGTCATAGT+TGG	-	chr3.2:90175390-90175409	MS.gene42272:CDS	35.0%
	TCAAATGGGTGGTTACATTA+AGG	+	chr3.2:90174672-90174691	None:intergenic	35.0%
	TCTAGGAACAATTCTATGCA+AGG	-	chr3.2:90175354-90175373	MS.gene42272:CDS	35.0%
	TGAAAAGGGGGTTACATTTA+GGG	+	chr3.2:90174707-90174726	None:intergenic	35.0%
	TTGAAAAGGGGGTTACATTT+AGG	+	chr3.2:90174708-90174727	None:intergenic	35.0%
	TTTATCAAAATCGATGTGGC+AGG	-	chr3.2:90172804-90172823	MS.gene42272:intron	35.0%
!	AACTCCTTGATCTGTGATTT+TGG	+	chr3.2:90174289-90174308	None:intergenic	35.0%
!	ATAACTGTTTTGCATGCTTG+AGG	+	chr3.2:90173011-90173030	None:intergenic	35.0%
!	ATCTAGAGTAAGCTTCTTCA+AGG	-	chr3.2:90173590-90173609	MS.gene42272:CDS	35.0%
!	CAACAAAATAAGTTGGAGAG+GGG	-	chr3.2:90172435-90172454	MS.gene42272:intron	35.0%
!	GAGCATAATCTTCTCCATTT+TGG	+	chr3.2:90173191-90173210	None:intergenic	35.0%
!	GGGAGTATAAATTCACATGT+AGG	+	chr3.2:90174643-90174662	None:intergenic	35.0%
!!	CGGCGGATTTTCTATAATTT+TGG	+	chr3.2:90173650-90173669	None:intergenic	35.0%
!!	CTTTCAAGTTCATATGGTTC+CGG	-	chr3.2:90173621-90173640	MS.gene42272:CDS	35.0%
!!	TATTTTTGATCAATGGCACC+AGG	+	chr3.2:90172004-90172023	None:intergenic	35.0%
!!!	ACTATCAGTTCTGCTTTTTG+TGG	+	chr3.2:90173712-90173731	None:intergenic	35.0%
!!!	ATTTTCATAAAAAGTGCCCC+GGG	+	chr3.2:90173796-90173815	None:intergenic	35.0%
!!!	CATGAAGTTTGGTTTTCCTA+TGG	-	chr3.2:90172528-90172547	MS.gene42272:intron	35.0%
	AAAAGGAATGTATGATGCCG+GGG	-	chr3.2:90172501-90172520	MS.gene42272:intron	40.0%
	AACGATCGTGACACTCTTTA+AGG	+	chr3.2:90173887-90173906	None:intergenic	40.0%
	ACAGCACTGTTATATGTGCT+TGG	+	chr3.2:90175384-90175403	None:intergenic	40.0%
	ACCAGAAAACTCATATGCTG+AGG	+	chr3.2:90175159-90175178	None:intergenic	40.0%
	AGATCAAAAGGAGGATGTTG+TGG	-	chr3.2:90171866-90171885	MS.gene42272:CDS	40.0%
	AGGATACGTTCACTTGTAAG+AGG	+	chr3.2:90172894-90172913	None:intergenic	40.0%
	AGTAAGCTTCTTCAAGGCAA+AGG	-	chr3.2:90173596-90173615	MS.gene42272:CDS	40.0%
	ATGAATGCATACCTGAGATC+TGG	+	chr3.2:90174216-90174235	None:intergenic	40.0%
	CAAAAACTGGTTGCAAGGAT+GGG	-	chr3.2:90175241-90175260	MS.gene42272:intron	40.0%
	CAAAAGGAATGTATGATGCC+GGG	-	chr3.2:90172500-90172519	MS.gene42272:intron	40.0%
	CCGTAGCATGTGATTTGATT+TGG	-	chr3.2:90172313-90172332	MS.gene42272:intron	40.0%
	CGGAACCATATGAACTTGAA+AGG	+	chr3.2:90173623-90173642	None:intergenic	40.0%
	CGTTCCTCAGTAATTAACTC+AGG	+	chr3.2:90172868-90172887	None:intergenic	40.0%
	CTACGGTTCAAATACTTTGG+TGG	+	chr3.2:90172299-90172318	None:intergenic	40.0%
	CTTGCATTTCACAATGTGGT+TGG	-	chr3.2:90172109-90172128	MS.gene42272:CDS	40.0%
	GAAAATGGGTCAGTTATTCC+GGG	+	chr3.2:90174368-90174387	None:intergenic	40.0%
	GACCGTTAACCAACTAGAAT+GGG	+	chr3.2:90172375-90172394	None:intergenic	40.0%
	GATACGTTCACTTGTAAGAG+GGG	+	chr3.2:90172892-90172911	None:intergenic	40.0%
	GGATACGTTCACTTGTAAGA+GGG	+	chr3.2:90172893-90172912	None:intergenic	40.0%
	GTAAGCTTCTTCAAGGCAAA+GGG	-	chr3.2:90173597-90173616	MS.gene42272:CDS	40.0%
	TATTGAATCGGCAAGATCTC+TGG	-	chr3.2:90172218-90172237	MS.gene42272:intron	40.0%
	TCGAAGATCTGATGGTTTGA+AGG	+	chr3.2:90174186-90174205	None:intergenic	40.0%
	TGACCGTTAACCAACTAGAA+TGG	+	chr3.2:90172376-90172395	None:intergenic	40.0%
	TGTCAATTAAATTGGGACGG+AGG	-	chr3.2:90174559-90174578	MS.gene42272:intron	40.0%
	TGTTATTCATGTGATGCAGC+TGG	-	chr3.2:90172400-90172419	MS.gene42272:intron	40.0%
!	AATAAGTTGGAGAGGGGATT+CGG	-	chr3.2:90172441-90172460	MS.gene42272:intron	40.0%
!	ATATGGGGATGAGCTTTTGT+GGG	-	chr3.2:90173107-90173126	MS.gene42272:CDS	40.0%
!	CAACCAGTTTTTGCATTAGC+AGG	+	chr3.2:90175234-90175253	None:intergenic	40.0%
!	TCAGCATATGAGTTTTCTGG+TGG	-	chr3.2:90175158-90175177	MS.gene42272:intron	40.0%
!	TCCTCAGCATATGAGTTTTC+TGG	-	chr3.2:90175155-90175174	MS.gene42272:intron	40.0%
!	TGCCCATTCTAGTTGGTTAA+CGG	-	chr3.2:90172370-90172389	MS.gene42272:intron	40.0%
!!	AAGGGCCTTTCAAGTTCATA+TGG	-	chr3.2:90173615-90173634	MS.gene42272:CDS	40.0%
!!	AATCTTGTGCTGGTTCCAAT+TGG	+	chr3.2:90172618-90172637	None:intergenic	40.0%
!!	ACTTTGGTGGGTTATTTAGG+CGG	+	chr3.2:90172286-90172305	None:intergenic	40.0%
!!	ATGAGTTTTCTGGTGGGATA+TGG	-	chr3.2:90175165-90175184	MS.gene42272:intron	40.0%
!!	CAGCATATGAGTTTTCTGGT+GGG	-	chr3.2:90175159-90175178	MS.gene42272:intron	40.0%
!!	TCGTGGGCAATTCTAGAATA+TGG	-	chr3.2:90172571-90172590	MS.gene42272:intron	40.0%
!!	TGCCGATTCAATATCCAGTT+CGG	+	chr3.2:90172211-90172230	None:intergenic	40.0%
!!!	TTTTCATAAAAAGTGCCCCG+GGG	+	chr3.2:90173795-90173814	None:intergenic	40.0%
	AACCAGCACAAGATTCTCTC+AGG	-	chr3.2:90172623-90172642	MS.gene42272:intron	45.0%
	AAGACCACACATTACAGCCT+CGG	+	chr3.2:90173670-90173689	None:intergenic	45.0%
	AAGTGCTCCAGTAGCTACAT+TGG	+	chr3.2:90175298-90175317	None:intergenic	45.0%
	AATGGATGCTGTTGGCCAAT+TGG	-	chr3.2:90172600-90172619	MS.gene42272:intron	45.0%
	ACCAAACTTCATGTGATCCC+CGG	+	chr3.2:90172521-90172540	None:intergenic	45.0%
	AGCAATGGCATCAGCATCTT+TGG	-	chr3.2:90172948-90172967	MS.gene42272:intron	45.0%
	AGCTACATTGGGATTCGGAT+CGG	+	chr3.2:90175286-90175305	None:intergenic	45.0%
	AGCTCTTCATACCTGAGTTC+CGG	+	chr3.2:90173256-90173275	None:intergenic	45.0%
	AGGAATCATCACCTGTAGCA+TGG	+	chr3.2:90173149-90173168	None:intergenic	45.0%
	AGTGCTCCAGTAGCTACATT+GGG	+	chr3.2:90175297-90175316	None:intergenic	45.0%
	ATCGTGGTTTCATCGCAGTT+TGG	+	chr3.2:90172259-90172278	None:intergenic	45.0%
	ATGTTGCTGCCCATTCTAGT+TGG	-	chr3.2:90172363-90172382	MS.gene42272:intron	45.0%
	CAAAAGGAGGATGTTGTGGT+TGG	-	chr3.2:90171870-90171889	MS.gene42272:CDS	45.0%
	CAACACTTGTGATCTGCAAC+AGG	+	chr3.2:90172838-90172857	None:intergenic	45.0%
	CCACAATTTGTGCATCACAG+GGG	-	chr3.2:90175198-90175217	MS.gene42272:intron	45.0%
	CCAGTAGCTACATTGGGATT+CGG	+	chr3.2:90175291-90175310	None:intergenic	45.0%
	CCCACAATTTGTGCATCACA+GGG	-	chr3.2:90175197-90175216	MS.gene42272:intron	45.0%
	CCCTGTGATGCACAAATTGT+GGG	+	chr3.2:90175200-90175219	None:intergenic	45.0%
	CTGTTGCAGATCACAAGTGT+TGG	-	chr3.2:90172836-90172855	MS.gene42272:intron	45.0%
	GCAAAAACTGGTTGCAAGGA+TGG	-	chr3.2:90175240-90175259	MS.gene42272:intron	45.0%
	GCAAAGGGGGGTTACATTAA+GGG	-	chr3.2:90174909-90174928	MS.gene42272:intron	45.0%
	GCAAAGTCTCGAAGATCTGA+TGG	+	chr3.2:90174194-90174213	None:intergenic	45.0%
	GCTAAGAATGCAGATGCAAC+AGG	+	chr3.2:90174101-90174120	None:intergenic	45.0%
	GGAGATCAAATGGATGCTGT+TGG	-	chr3.2:90172592-90172611	MS.gene42272:intron	45.0%
	GTCTGATATGGGTGAGTGAA+TGG	-	chr3.2:90174060-90174079	MS.gene42272:CDS	45.0%
	GTCTGGAGGAACACAAACTA+TGG	-	chr3.2:90173961-90173980	MS.gene42272:intron	45.0%
	TCAAAATCGATGTGGCAGGT+TGG	-	chr3.2:90172808-90172827	MS.gene42272:intron	45.0%
	TCCCACAATTTGTGCATCAC+AGG	-	chr3.2:90175196-90175215	MS.gene42272:intron	45.0%
	TCCTACCTTCAGTATGTGAC+TGG	-	chr3.2:90173165-90173184	MS.gene42272:CDS	45.0%
	TCTCGTCAATGCTCATCCTT+CGG	-	chr3.2:90172660-90172679	MS.gene42272:intron	45.0%
	TGCAAAGGGGGGTTACATTA+AGG	-	chr3.2:90174908-90174927	MS.gene42272:intron	45.0%
	TGGGTGGTTACATTAAGGGA+CGG	+	chr3.2:90174667-90174686	None:intergenic	45.0%
	TGGTTACATTAAGGGACGGA+GGG	+	chr3.2:90174663-90174682	None:intergenic	45.0%
	TTATTTAGGCGGCTCAATCG+TGG	+	chr3.2:90172275-90172294	None:intergenic	45.0%
	TTCAGCTGCAACATCTGATC+CGG	+	chr3.2:90172920-90172939	None:intergenic	45.0%
	TTCCAGGCTGATTACGTGTT+GGG	-	chr3.2:90175126-90175145	MS.gene42272:intron	45.0%
	TTTGGCCAGTCACATACTGA+AGG	+	chr3.2:90173173-90173192	None:intergenic	45.0%
!	ACTTTTGCGGACAAGCATAG+AGG	-	chr3.2:90173033-90173052	MS.gene42272:intron	45.0%
!	CAGTATGTGACTGGCCAAAA+TGG	-	chr3.2:90173174-90173193	MS.gene42272:CDS	45.0%
!	GATATGGGGATGAGCTTTTG+TGG	-	chr3.2:90173106-90173125	MS.gene42272:CDS	45.0%
!	TCCTATGGCTTTTACTGCCT+CGG	-	chr3.2:90172543-90172562	MS.gene42272:intron	45.0%
!	TTTTGATCAATGGCACCAGG+AGG	+	chr3.2:90172001-90172020	None:intergenic	45.0%
!!	GTTTGTGATTCTGGCTCTTG+TGG	-	chr3.2:90171901-90171920	MS.gene42272:CDS	45.0%
!!	TTTCATAAAAAGTGCCCCGG+GGG	+	chr3.2:90173794-90173813	None:intergenic	45.0%
!!!	GTTCTGCTTTTTGTGGCTGT+TGG	+	chr3.2:90173705-90173724	None:intergenic	45.0%
	AAACTGGTTGCAAGGATGGG+TGG	-	chr3.2:90175244-90175263	MS.gene42272:intron	50.0%
	AAATGCTAATGAGTGCCCCC+GGG	-	chr3.2:90173776-90173795	MS.gene42272:intron	50.0%
	AAGCCCAACCTGGTTCAGTT+GGG	-	chr3.2:90173218-90173237	MS.gene42272:CDS	50.0%
	AATTAGTACTCCCTCCGTCC+CGG	-	chr3.2:90174347-90174366	MS.gene42272:CDS	50.0%
	ACCGAGGCAGTAAAAGCCAT+AGG	+	chr3.2:90172547-90172566	None:intergenic	50.0%
	AGCTGAAACTGCAGCAGCAA+TGG	-	chr3.2:90172933-90172952	MS.gene42272:intron	50.0%
	AGGGGGGTTACATTAAGGGA+CGG	-	chr3.2:90174913-90174932	MS.gene42272:intron	50.0%
	AGTTGGGACAACAAGCTTGC+CGG	-	chr3.2:90173234-90173253	MS.gene42272:CDS	50.0%
	ATGGGTCAGTTATTCCGGGA+CGG	+	chr3.2:90174364-90174383	None:intergenic	50.0%
	CAAGTGAACGTATCCTGTCC+CGG	-	chr3.2:90172898-90172917	MS.gene42272:intron	50.0%
	CACCTGAGAGAATCTTGTGC+TGG	+	chr3.2:90172628-90172647	None:intergenic	50.0%
	CAGCACAAGATTCTCTCAGG+TGG	-	chr3.2:90172626-90172645	MS.gene42272:intron	50.0%
	CCCCTGTGATGCACAAATTG+TGG	+	chr3.2:90175201-90175220	None:intergenic	50.0%
	CCGAATCCCAATGTAGCTAC+TGG	-	chr3.2:90175288-90175307	MS.gene42272:CDS	50.0%
	CTCAATTTGGAAGCCCAACC+TGG	-	chr3.2:90173208-90173227	MS.gene42272:CDS	50.0%
	CTTCCAGGCTGATTACGTGT+TGG	-	chr3.2:90175125-90175144	MS.gene42272:intron	50.0%
	GAAATGCTAATGAGTGCCCC+CGG	-	chr3.2:90173775-90173794	MS.gene42272:intron	50.0%
	GCCAGTCACATACTGAAGGT+AGG	+	chr3.2:90173169-90173188	None:intergenic	50.0%
	GGGTTACATTAAGGGACGGA+GGG	-	chr3.2:90174917-90174936	MS.gene42272:intron	50.0%
	GTGGTTACATTAAGGGACGG+AGG	+	chr3.2:90174664-90174683	None:intergenic	50.0%
	TCAGCTGCAACATCTGATCC+GGG	+	chr3.2:90172919-90172938	None:intergenic	50.0%
	TCGAGACTTTGCCAGATCTC+AGG	-	chr3.2:90174202-90174221	MS.gene42272:CDS	50.0%
	TCGGCAAGATCTCTGGATCA+TGG	-	chr3.2:90172225-90172244	MS.gene42272:intron	50.0%
	TGTCCCAACTGAACCAGGTT+GGG	+	chr3.2:90173224-90173243	None:intergenic	50.0%
	TTGTCCCAACTGAACCAGGT+TGG	+	chr3.2:90173225-90173244	None:intergenic	50.0%
	TTTGTGGCTGTTGGAGAGTC+TGG	+	chr3.2:90173696-90173715	None:intergenic	50.0%
!	CTTGTTGTCCCAACTGAACC+AGG	+	chr3.2:90173229-90173248	None:intergenic	50.0%
!	GTAGCTACTGGAGCACTTGT+TGG	-	chr3.2:90175300-90175319	MS.gene42272:CDS	50.0%
!!	GTGATTCTGGCTCTTGTGGT+CGG	-	chr3.2:90171905-90171924	MS.gene42272:CDS	50.0%
	AATGCTAATGAGTGCCCCCG+GGG	-	chr3.2:90173777-90173796	MS.gene42272:intron	55.0%
	AATTGCCCACGATAGCACCG+AGG	+	chr3.2:90172563-90172582	None:intergenic	55.0%
	ACCACACATTACAGCCTCGG+CGG	+	chr3.2:90173667-90173686	None:intergenic	55.0%
	ACCTGTAGCATGGTAGAGCC+AGG	+	chr3.2:90173139-90173158	None:intergenic	55.0%
	ATCAATGGCACCAGGAGGAC+CGG	+	chr3.2:90171996-90172015	None:intergenic	55.0%
	CAACAAGCTTGCCGGAACTC+AGG	-	chr3.2:90173242-90173261	MS.gene42272:intron	55.0%
	GAAGCCCAACCTGGTTCAGT+TGG	-	chr3.2:90173217-90173236	MS.gene42272:CDS	55.0%
	GAGAGGGGATTCGGCTCTTA+AGG	-	chr3.2:90172450-90172469	MS.gene42272:intron	55.0%
	GCCGGGGATCACATGAAGTT+TGG	-	chr3.2:90172517-90172536	MS.gene42272:intron	55.0%
	GGATTGAAGGGCCGAAGATG+TGG	+	chr3.2:90175436-90175455	None:intergenic	55.0%
	GGGGATTCGGCTCTTAAGGA+TGG	-	chr3.2:90172454-90172473	MS.gene42272:intron	55.0%
	GGGGTTACATTAAGGGACGG+AGG	-	chr3.2:90174916-90174935	MS.gene42272:intron	55.0%
	GTCAGTTATTCCGGGACGGA+GGG	+	chr3.2:90174360-90174379	None:intergenic	55.0%
	TGCAACATCTGATCCGGGAC+AGG	+	chr3.2:90172914-90172933	None:intergenic	55.0%
	TGCCCAACACGTAATCAGCC+TGG	+	chr3.2:90175131-90175150	None:intergenic	55.0%
!	AGCTTTTGTGGGCAGCTACC+TGG	-	chr3.2:90173118-90173137	MS.gene42272:CDS	55.0%
!	GATAAACCCGAACCGGTTCC+CGG	-	chr3.2:90171974-90171993	MS.gene42272:CDS	55.0%
!	GCTACTGGAGCACTTGTTGG+TGG	-	chr3.2:90175303-90175322	MS.gene42272:CDS	55.0%
!!	ACCTGGCTCTACCATGCTAC+AGG	-	chr3.2:90173135-90173154	MS.gene42272:CDS	55.0%
!!	TACTGCCTCGGTGCTATCGT+GGG	-	chr3.2:90172555-90172574	MS.gene42272:intron	55.0%
!!	TTACTGCCTCGGTGCTATCG+TGG	-	chr3.2:90172554-90172573	MS.gene42272:intron	55.0%
	GGTCAGTTATTCCGGGACGG+AGG	+	chr3.2:90174361-90174380	None:intergenic	60.0%
	GTTGCAAGGATGGGTGGCAG+TGG	-	chr3.2:90175250-90175269	MS.gene42272:CDS	60.0%
	TCAATGGCACCAGGAGGACC+GGG	+	chr3.2:90171995-90172014	None:intergenic	60.0%
	TCCGCCGAGGCTGTAATGTG+TGG	-	chr3.2:90173663-90173682	MS.gene42272:CDS	60.0%
	AGGAGGACCGGGAACCGGTT+CGG	+	chr3.2:90171984-90172003	None:intergenic	65.0%
	GCACCAGGAGGACCGGGAAC+CGG	+	chr3.2:90171989-90172008	None:intergenic	70.0%
!	GAACCGGTTCCCGGTCCTCC+TGG	-	chr3.2:90171983-90172002	MS.gene42272:CDS	70.0%
!	GGAGGACCGGGAACCGGTTC+GGG	+	chr3.2:90171983-90172002	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	90171851	90175464	90171851	ID=MS.gene42272
chr3.2	mRNA	90171851	90175464	90171851	ID=MS.gene42272.t1;Parent=MS.gene42272
chr3.2	exon	90175245	90175464	90175245	ID=MS.gene42272.t1.exon1;Parent=MS.gene42272.t1
chr3.2	CDS	90175245	90175464	90175245	ID=cds.MS.gene42272.t1;Parent=MS.gene42272.t1
chr3.2	exon	90174613	90174896	90174613	ID=MS.gene42272.t1.exon2;Parent=MS.gene42272.t1
chr3.2	CDS	90174613	90174896	90174613	ID=cds.MS.gene42272.t1;Parent=MS.gene42272.t1
chr3.2	exon	90174052	90174489	90174052	ID=MS.gene42272.t1.exon3;Parent=MS.gene42272.t1
chr3.2	CDS	90174052	90174489	90174052	ID=cds.MS.gene42272.t1;Parent=MS.gene42272.t1
chr3.2	exon	90173586	90173733	90173586	ID=MS.gene42272.t1.exon4;Parent=MS.gene42272.t1
chr3.2	CDS	90173586	90173733	90173586	ID=cds.MS.gene42272.t1;Parent=MS.gene42272.t1
chr3.2	exon	90173092	90173258	90173092	ID=MS.gene42272.t1.exon5;Parent=MS.gene42272.t1
chr3.2	CDS	90173092	90173258	90173092	ID=cds.MS.gene42272.t1;Parent=MS.gene42272.t1
chr3.2	exon	90171851	90172183	90171851	ID=MS.gene42272.t1.exon6;Parent=MS.gene42272.t1
chr3.2	CDS	90171851	90172183	90171851	ID=cds.MS.gene42272.t1;Parent=MS.gene42272.t1

Gene Sequence

>MS.gene42272

ATGAGAGAAAAATCGAGATCAAAAGGAGGATGTTGTGGTTGGTTTATTGCGTTTGTGATTCTGGCTCTTGTGGTCGGTGCTATTGTTTATGCTGTTAAGAAGAAAATCGATAACTCAAATTCAGATAAACCCGAACCGGTTCCCGGTCCTCCTGGTGCCATTGATCAAAAATATGCTTCTGCTCTCAAAACTGCAATGCAATTCTTCGACGTGCAAAAATGTAATAATCCTTTTTTTCATTCTCGGTTACCTTTATTTCTTGCATTTCACAATGTGGTTGGTTTATTATAGGAAGATATTAGATAGTTATTTATTATTATTATTGCAGTGATGTTTTTTCGCGTAATGTTTTAAAAACCGAACTGGATATTGAATCGGCAAGATCTCTGGATCATGGTTCAACTGCCAAACTGCGATGAAACCACGATTGAGCCGCCTAAATAACCCACCAAAGTATTTGAACCGTAGCATGTGATTTGATTTGGTTTTGAAAACATTGTTTTGGCATGTCAATGTTGCTGCCCATTCTAGTTGGTTAACGGTCATGTTTGTTATTCATGTGATGCAGCTGGCAAGTTAGAGAACAACAAAATAAGTTGGAGAGGGGATTCGGCTCTTAAGGATGGAAAGCAAGCAGATTTAGATCTAACAAAAGGAATGTATGATGCCGGGGATCACATGAAGTTTGGTTTTCCTATGGCTTTTACTGCCTCGGTGCTATCGTGGGCAATTCTAGAATATGGAGATCAAATGGATGCTGTTGGCCAATTGGAACCAGCACAAGATTCTCTCAGGTGGATCACTGATTTTCTCGTCAATGCTCATCCTTCGGAGAATGTTCTGTATATTCAGGTTAGTTGGTCTGAAAACACAAACTGTTAAGCTGACAGTTGATCAAATGTAAAATATAACTACATTGATGTTTTTCTAGAATTTGTTTCTATCTAGTTTCATTTATCAAAATCGATGTGGCAGGTTGGTGATCCTGTTGCAGATCACAAGTGTTGGAATAGACCTGAGTTAATTACTGAGGAACGACCCCTCTTACAAGTGAACGTATCCTGTCCCGGATCAGATGTTGCAGCTGAAACTGCAGCAGCAATGGCATCAGCATCTTTGGTCTTCAAAAAGTCAGATGCTACATATTCAAGCACTCTCCTCAAGCATGCAAAACAGTTATTTACTTTTGCGGACAAGCATAGAGGAATTTACAGTGAGAATATACCTGAAGTTGCGACATATTATAACTCAACTGGATATGGGGATGAGCTTTTGTGGGCAGCTACCTGGCTCTACCATGCTACAGGTGATGATTCCTACCTTCAGTATGTGACTGGCCAAAATGGAGAAGATTATGCTCAATTTGGAAGCCCAACCTGGTTCAGTTGGGACAACAAGCTTGCCGGAACTCAGGTATGAAGAGCTGCCGAATCTTGTTTACAAATTCTAAACTAGGATCATTTTATAGCTGAAGACAATCATTAGTTATACTAACGTTGTTTGCTACCGAAGTGTTTTTTTTTATATATATTTTATTGCAACCTACACATTACATAGAATAGACTCAATCAAGCCTTATGGCATTATCTTATCCTAAATGATACTTCTACTTACTTTATTACAAACTTTGCAATGCTTTCATGTATATACTAGGGGATACTTCTACTTATCTTAGATGTTACATCTACTTACTTTATTACAAAGCTTTAATAATCCTTCTTCTTAATGCAGGTTTTGTTATCTAGAGTAAGCTTCTTCAAGGCAAAGGGCCTTTCAAGTTCATATGGTTCCGGCCTCCAAAATTATAGAAAATCCGCCGAGGCTGTAATGTGTGGTCTTCTTCCAGACTCTCCAACAGCCACAAAAAGCAGAACTGATAGTAATGTTCTCCTTGAATGCTATCTGACTTGATATTAACTAATGGGAAATGCTAATGAGTGCCCCCGGGGCACTTTTTATGAAAATTTGTGTATTCAATGCATTGGAAATTGAAGTATTTGAATTTTTTAAATAATAATTTCTTAATTTAGAATCCTTAAAGAGTGTCACGATCGTTAGCAAGACCCTTAACTTATAATCTGATTAGCATGCTGAATAGTTTTATTAGATAGTCTGGAGGAACACAAACTATGGAAATTCCATTTTTAGTAATATATTTCTACTGCAATACGTTGTCTAATTTCATTTTTCTTTTTCTTTTATATAGATGGTCTGATATGGGTGAGTGAATGGAACGCTTTGCAGCATCCTGTTGCATCTGCATTCTTAGCTTCTGTTTACAGTGACTATATGCTTACAACGCAGACTCCCAATATAAAATGTGATTCAGATTCCTTCAAACCATCAGATCTTCGAGACTTTGCCAGATCTCAGGTATGCATTCATTATTATTTTTGTAGAATACTCTCTCTGGCCCTTAATATAAGAAGAATTTACCAAAATCACAGATCAAGGAGTTGTATTTTTTTTTTTTGGTACAGATCAAGGAGCTTATTTAATTAGTACTCCCTCCGTCCCGGAATAACTGACCCATTTTCTAAAAAAAAGTGTCCCAAAATAACTGACCCATTTCAATTTTCAATACAACTTTCATCATTCTCAATACAATATAACACTAAATAATACTACTTTTATCATTCCCAATACAATATATTCCACTTTCCCCTTTATTTATACATTTTTCTTAATATGTGTGAAAAACAAAATTGTGTCAATTAAATTGGGACGGAGGTAGTATAAAATTGAGTGGTTATTGTTCCAATTAAATCAATAACATTAAATGTTTTATACCTACATGTGAATTTATACTCCCTCCGTCCCTTAATGTAACCACCCATTTGATTTTATTTTTGTCCCTAAATGTAACCCCCTTTTCAAATTACTAGATGCATTTATTACTTTTTTCCTAAACATACCCCTAATTAATACTACTAACTTATCTTGAAATATGAAAAGTCAAATTTAATACACATACAAACAAAGGACAATTTGGTAATATTAATACACAAAACAGACACATTAATTACACTGACAACTTTTCTTAAGAAATGTGAAAAATGCAAAGGGGGGTTACATTAAGGGACGGAGGGAGTACTAAACATTTATCTGACATTAAATAAAGGGTGTAAAAAGCATTTTAGCAATTAATGCACATTGAAATGAATTTCTTTTTCTTATAATAAAGACCAAAAAATACGCACAATTTCTTATAATAGGGATCAGAGATAGTATCGGCTTGAAATTATCTGCAACTAACTTGAAAACTTGTCTAATACTTCCAGGCTGATTACGTGTTGGGCAAGAATCCTCAGCATATGAGTTTTCTGGTGGGATATGGAAAGAATTTCCCACAATTTGTGCATCACAGGGGAGCTTCAATTCCTGCTAATGCAAAAACTGGTTGCAAGGATGGGTGGCAGTGGCTTGACTCATCCGATCCGAATCCCAATGTAGCTACTGGAGCACTTGTTGGTGGACCTTTCTTAAATGAGACTTACATTGATTCTAGGAACAATTCTATGCAAGGAGAACCAAGCACATATAACAGTGCTGTCATAGTTGGTCTCTTATCAAGTTTAGTCACCACATCTTCGGCCCTTCAATCCTTCTCCTAA

Protein sequence

>MS.gene42272.t1

MREKSRSKGGCCGWFIAFVILALVVGAIVYAVKKKIDNSNSDKPEPVPGPPGAIDQKYASALKTAMQFFDVQKSGKLENNKISWRGDSALKDGKQADLDLTKGMYDAGDHMKFGFPMAFTASVLSWAILEYGDQMDAVGQLEPAQDSLRWITDFLVNAHPSENVLYIQVGDPVADHKCWNRPELITEERPLLQVNVSCPGSDVAAETAAAMASASLVFKKSDATYSSTLLKHAKQLFTFADKHRGIYSENIPEVATYYNSTGYGDELLWAATWLYHATGDDSYLQYVTGQNGEDYAQFGSPTWFSWDNKLAGTQVLLSRVSFFKAKGLSSSYGSGLQNYRKSAEAVMCGLLPDSPTATKSRTDNGLIWVSEWNALQHPVASAFLASVYSDYMLTTQTPNIKCDSDSFKPSDLRDFARSQADYVLGKNPQHMSFLVGYGKNFPQFVHHRGASIPANAKTGCKDGWQWLDSSDPNPNVATGALVGGPFLNETYIDSRNNSMQGEPSTYNSAVIVGLLSSLVTTSSALQSFS