Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07235.t1 | RHN81090.1 | 99.5 | 439 | 2 | 0 | 1 | 439 | 65 | 503 | 1.20E-259 | 905.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07235.t1 | O81416 | 79.7 | 439 | 89 | 0 | 1 | 439 | 78 | 516 | 8.6e-219 | 760.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07235.t1 | A0A396JS05 | 99.5 | 439 | 2 | 0 | 1 | 439 | 65 | 503 | 8.5e-260 | 905.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene07235 | 0.800876 | 1.17E-48 | -1.69E-46 |
| MS.gene049989 | MS.gene07235 | 0.811978 | 5.34E-51 | -1.69E-46 |
| MS.gene052367 | MS.gene07235 | 0.819842 | 9.39E-53 | -1.69E-46 |
| MS.gene053416 | MS.gene07235 | 0.807531 | 4.83E-50 | -1.69E-46 |
| MS.gene053417 | MS.gene07235 | 0.807098 | 5.97E-50 | -1.69E-46 |
| MS.gene055957 | MS.gene07235 | 0.820698 | 5.98E-53 | -1.69E-46 |
| MS.gene056041 | MS.gene07235 | 0.809317 | 2.01E-50 | -1.69E-46 |
| MS.gene060473 | MS.gene07235 | 0.805155 | 1.53E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07235.t1 | MTR_1g088190 | 99.281 | 417 | 3 | 0 | 23 | 439 | 69 | 485 | 0.0 | 864 |
| MS.gene07235.t1 | MTR_3g080810 | 63.134 | 434 | 159 | 1 | 1 | 433 | 61 | 494 | 0.0 | 577 |
| MS.gene07235.t1 | MTR_8g104820 | 61.239 | 436 | 166 | 2 | 1 | 433 | 56 | 491 | 0.0 | 558 |
| MS.gene07235.t1 | MTR_3g117500 | 59.584 | 433 | 172 | 2 | 3 | 432 | 52 | 484 | 0.0 | 539 |
| MS.gene07235.t1 | MTR_1g088190 | 98.814 | 253 | 3 | 0 | 23 | 275 | 69 | 321 | 0.0 | 527 |
| MS.gene07235.t1 | MTR_3g010330 | 59.540 | 435 | 170 | 3 | 1 | 433 | 51 | 481 | 0.0 | 523 |
| MS.gene07235.t1 | MTR_4g035930 | 54.398 | 432 | 192 | 2 | 1 | 432 | 41 | 467 | 1.56e-171 | 489 |
| MS.gene07235.t1 | MTR_4g035955 | 54.167 | 432 | 193 | 2 | 1 | 432 | 40 | 466 | 3.94e-170 | 486 |
| MS.gene07235.t1 | MTR_4g035975 | 55.882 | 442 | 180 | 6 | 1 | 432 | 53 | 489 | 2.04e-168 | 482 |
| MS.gene07235.t1 | MTR_5g010000 | 51.835 | 436 | 197 | 6 | 1 | 432 | 66 | 492 | 4.91e-156 | 451 |
| MS.gene07235.t1 | MTR_8g099410 | 50.897 | 446 | 207 | 7 | 1 | 437 | 54 | 496 | 2.44e-153 | 445 |
| MS.gene07235.t1 | MTR_8g099410 | 50.897 | 446 | 207 | 7 | 1 | 437 | 54 | 496 | 4.58e-152 | 445 |
| MS.gene07235.t1 | MTR_5g009970 | 50.343 | 437 | 202 | 7 | 1 | 432 | 67 | 493 | 5.00e-152 | 441 |
| MS.gene07235.t1 | MTR_5g009970 | 50.237 | 422 | 195 | 7 | 16 | 432 | 8 | 419 | 3.40e-146 | 423 |
| MS.gene07235.t1 | MTR_3g080190 | 49.658 | 439 | 211 | 6 | 1 | 430 | 66 | 503 | 3.88e-145 | 424 |
| MS.gene07235.t1 | MTR_5g085730 | 47.297 | 444 | 222 | 7 | 1 | 434 | 57 | 498 | 7.47e-145 | 423 |
| MS.gene07235.t1 | MTR_5g093590 | 47.059 | 442 | 223 | 6 | 1 | 432 | 60 | 500 | 1.92e-138 | 406 |
| MS.gene07235.t1 | MTR_1g037340 | 48.519 | 439 | 213 | 7 | 1 | 433 | 51 | 482 | 3.07e-133 | 392 |
| MS.gene07235.t1 | MTR_3g105230 | 45.626 | 423 | 216 | 6 | 3 | 422 | 58 | 469 | 1.10e-132 | 391 |
| MS.gene07235.t1 | MTR_4g074960 | 45.638 | 447 | 233 | 6 | 1 | 439 | 55 | 499 | 1.29e-132 | 395 |
| MS.gene07235.t1 | MTR_5g009970 | 48.507 | 402 | 192 | 7 | 36 | 432 | 1 | 392 | 2.37e-132 | 387 |
| MS.gene07235.t1 | MTR_3g023740 | 45.853 | 434 | 221 | 6 | 3 | 433 | 58 | 480 | 1.43e-128 | 380 |
| MS.gene07235.t1 | MTR_3g113720 | 41.761 | 443 | 241 | 8 | 1 | 432 | 82 | 518 | 5.38e-113 | 342 |
| MS.gene07235.t1 | MTR_8g075990 | 44.570 | 442 | 228 | 8 | 3 | 433 | 90 | 525 | 1.44e-111 | 338 |
| MS.gene07235.t1 | MTR_5g009970 | 50.000 | 334 | 154 | 6 | 102 | 432 | 1 | 324 | 7.51e-107 | 320 |
| MS.gene07235.t1 | MTR_7g108925 | 86.503 | 163 | 22 | 0 | 277 | 439 | 43 | 205 | 1.70e-102 | 304 |
| MS.gene07235.t1 | MTR_2g028480 | 41.935 | 465 | 227 | 15 | 1 | 433 | 137 | 590 | 2.03e-87 | 279 |
| MS.gene07235.t1 | MTR_3g082440 | 38.806 | 469 | 241 | 16 | 1 | 437 | 142 | 596 | 8.45e-82 | 264 |
| MS.gene07235.t1 | MTR_3g090540 | 36.538 | 468 | 244 | 16 | 1 | 432 | 133 | 583 | 5.45e-80 | 259 |
| MS.gene07235.t1 | MTR_0393s0050 | 61.429 | 140 | 53 | 1 | 277 | 415 | 20 | 159 | 1.66e-57 | 187 |
| MS.gene07235.t1 | MTR_1g037320 | 48.148 | 162 | 80 | 2 | 36 | 195 | 1 | 160 | 2.02e-35 | 132 |
| MS.gene07235.t1 | MTR_1g037320 | 45.714 | 140 | 71 | 3 | 295 | 430 | 151 | 289 | 3.42e-30 | 118 |
| MS.gene07235.t1 | MTR_7g108920 | 67.742 | 93 | 29 | 1 | 183 | 275 | 86 | 177 | 2.32e-32 | 121 |
| MS.gene07235.t1 | MTR_4g128810 | 36.842 | 152 | 90 | 3 | 284 | 433 | 187 | 334 | 1.20e-24 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07235.t1 | AT4G02290 | 79.727 | 439 | 89 | 0 | 1 | 439 | 78 | 516 | 0.0 | 747 |
| MS.gene07235.t1 | AT1G02800 | 77.701 | 435 | 95 | 1 | 1 | 435 | 69 | 501 | 0.0 | 707 |
| MS.gene07235.t1 | AT4G02290 | 78.713 | 404 | 86 | 0 | 36 | 439 | 1 | 404 | 0.0 | 676 |
| MS.gene07235.t1 | AT1G70710 | 60.550 | 436 | 171 | 1 | 1 | 435 | 54 | 489 | 0.0 | 550 |
| MS.gene07235.t1 | AT1G23210 | 59.353 | 433 | 176 | 0 | 1 | 433 | 54 | 486 | 0.0 | 540 |
| MS.gene07235.t1 | AT1G71380 | 58.065 | 434 | 177 | 2 | 1 | 433 | 50 | 479 | 0.0 | 523 |
| MS.gene07235.t1 | AT1G22880 | 58.716 | 436 | 175 | 2 | 1 | 435 | 50 | 481 | 0.0 | 519 |
| MS.gene07235.t1 | AT4G39010 | 56.463 | 441 | 188 | 3 | 1 | 437 | 55 | 495 | 1.07e-180 | 514 |
| MS.gene07235.t1 | AT1G22880 | 56.858 | 401 | 168 | 2 | 36 | 435 | 1 | 397 | 1.56e-166 | 474 |
| MS.gene07235.t1 | AT4G39000 | 52.064 | 436 | 205 | 3 | 1 | 432 | 51 | 486 | 5.93e-163 | 468 |
| MS.gene07235.t1 | AT1G64390 | 51.131 | 442 | 204 | 7 | 1 | 433 | 51 | 489 | 1.02e-154 | 452 |
| MS.gene07235.t1 | AT4G23560 | 51.818 | 440 | 200 | 5 | 1 | 437 | 49 | 479 | 4.33e-153 | 443 |
| MS.gene07235.t1 | AT4G38990 | 49.887 | 441 | 212 | 5 | 1 | 432 | 49 | 489 | 4.51e-151 | 438 |
| MS.gene07235.t1 | AT4G09740 | 51.142 | 438 | 202 | 5 | 1 | 435 | 49 | 477 | 4.60e-150 | 435 |
| MS.gene07235.t1 | AT4G11050 | 49.773 | 440 | 211 | 6 | 1 | 432 | 52 | 489 | 9.04e-150 | 437 |
| MS.gene07235.t1 | AT4G11050 | 49.773 | 440 | 211 | 6 | 1 | 432 | 52 | 489 | 3.43e-149 | 438 |
| MS.gene07235.t1 | AT4G11050 | 49.773 | 440 | 211 | 6 | 1 | 432 | 52 | 489 | 3.63e-149 | 438 |
| MS.gene07235.t1 | AT2G32990 | 50.114 | 439 | 209 | 6 | 1 | 430 | 65 | 502 | 4.12e-149 | 434 |
| MS.gene07235.t1 | AT2G44540 | 48.165 | 436 | 214 | 7 | 1 | 430 | 59 | 488 | 5.51e-135 | 397 |
| MS.gene07235.t1 | AT2G44550 | 47.717 | 438 | 216 | 8 | 1 | 432 | 59 | 489 | 2.14e-133 | 393 |
| MS.gene07235.t1 | AT2G44570 | 48.630 | 438 | 212 | 8 | 3 | 433 | 61 | 492 | 6.13e-133 | 392 |
| MS.gene07235.t1 | AT3G43860 | 47.696 | 434 | 213 | 6 | 3 | 433 | 62 | 484 | 1.00e-132 | 391 |
| MS.gene07235.t1 | AT3G43860 | 47.696 | 434 | 213 | 6 | 3 | 433 | 62 | 484 | 1.00e-132 | 391 |
| MS.gene07235.t1 | AT4G39010 | 54.955 | 333 | 146 | 3 | 1 | 329 | 55 | 387 | 1.04e-131 | 385 |
| MS.gene07235.t1 | AT2G44560 | 47.836 | 439 | 217 | 7 | 1 | 433 | 59 | 491 | 5.75e-128 | 379 |
| MS.gene07235.t1 | AT1G19940 | 45.392 | 434 | 224 | 6 | 1 | 427 | 73 | 500 | 2.33e-123 | 368 |
| MS.gene07235.t1 | AT1G19940 | 45.392 | 434 | 224 | 6 | 1 | 427 | 73 | 500 | 2.33e-123 | 368 |
| MS.gene07235.t1 | AT1G75680 | 46.977 | 430 | 215 | 6 | 1 | 423 | 82 | 505 | 1.01e-122 | 367 |
| MS.gene07235.t1 | AT1G48930 | 45.701 | 442 | 222 | 7 | 1 | 430 | 56 | 491 | 4.16e-119 | 361 |
| MS.gene07235.t1 | AT1G22880 | 58.681 | 288 | 114 | 2 | 1 | 287 | 50 | 333 | 3.41e-106 | 318 |
| MS.gene07235.t1 | AT2G44570 | 45.845 | 349 | 177 | 7 | 3 | 345 | 61 | 403 | 3.53e-89 | 277 |
| MS.gene07235.t1 | AT4G38990 | 47.078 | 308 | 138 | 3 | 1 | 306 | 49 | 333 | 3.93e-87 | 270 |
| MS.gene07235.t1 | AT1G19940 | 44.214 | 337 | 179 | 5 | 1 | 330 | 73 | 407 | 8.91e-86 | 268 |
| MS.gene07235.t1 | AT4G24260 | 40.517 | 464 | 234 | 15 | 1 | 433 | 135 | 587 | 2.03e-84 | 271 |
| MS.gene07235.t1 | AT5G49720 | 40.645 | 465 | 233 | 16 | 1 | 433 | 134 | 587 | 1.02e-81 | 264 |
| MS.gene07235.t1 | AT1G65610 | 37.687 | 467 | 250 | 17 | 1 | 438 | 142 | 596 | 5.87e-78 | 254 |
| MS.gene07235.t1 | AT4G24260 | 38.227 | 361 | 185 | 14 | 1 | 330 | 135 | 488 | 1.76e-47 | 170 |
| MS.gene07235.t1 | AT4G24260 | 40.893 | 291 | 139 | 11 | 1 | 263 | 135 | 420 | 1.97e-45 | 164 |
Find 117 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCCCTTCTCACTAAAATTT+TGG | 0.161476 | 1.4:+70024602 | None:intergenic |
| CATTAACTTGAATGTAATTT+AGG | 0.180687 | 1.4:+70024236 | None:intergenic |
| CCCAGAGTAATCACAGTAAA+AGG | 0.188513 | 1.4:+70024415 | None:intergenic |
| ATGTGATTTGGTCAAGTATT+TGG | 0.246836 | 1.4:+70023767 | None:intergenic |
| CTAAATTACATTCAAGTTAA+TGG | 0.258488 | 1.4:-70024235 | MS.gene07235:CDS |
| GCTGAACACTGGATCTTTCC+TGG | 0.260459 | 1.4:+70023469 | None:intergenic |
| CTGTGATTACTCTGGGTATC+AGG | 0.271354 | 1.4:-70024408 | MS.gene07235:intron |
| TCAATCTTGAAAACACTTCT+TGG | 0.276130 | 1.4:+70024717 | None:intergenic |
| CCACTAGAATGTTGGGATTA+GGG | 0.289377 | 1.4:+70023419 | None:intergenic |
| TTCGTTTGCTCTTTAATTCC+TGG | 0.293478 | 1.4:-70023980 | MS.gene07235:CDS |
| GCTAAGGTTCTGAGTCTCTT+TGG | 0.294218 | 1.4:+70023711 | None:intergenic |
| GAGTCTCTTTGGTGTTACTA+TGG | 0.297437 | 1.4:+70023722 | None:intergenic |
| AAAACTAACCTGAACATAAA+TGG | 0.298563 | 1.4:+70024880 | None:intergenic |
| TTACTACCACTATGCTTTCA+TGG | 0.301130 | 1.4:-70025009 | MS.gene07235:CDS |
| TCATAATCTGACCGTTTATC+TGG | 0.305225 | 1.4:+70023358 | None:intergenic |
| CTTGGTGTGTCCATATCTTC+TGG | 0.355409 | 1.4:+70024735 | None:intergenic |
| GCTTATCTTGCACACTCATT+TGG | 0.355547 | 1.4:-70023286 | MS.gene07235:CDS |
| CACATCCACTAGCTTCTTAC+TGG | 0.357156 | 1.4:-70023799 | MS.gene07235:CDS |
| TCATGGAGTGTTATTGAGTT+TGG | 0.368140 | 1.4:-70024992 | MS.gene07235:CDS |
| CCTGGGTGTACAGCCATTGA+TGG | 0.373557 | 1.4:+70023487 | None:intergenic |
| ATTCTAGTGGGTGCTGTTGT+TGG | 0.376217 | 1.4:-70023406 | MS.gene07235:CDS |
| ATGTACAATGTAGGTTGATT+TGG | 0.376793 | 1.4:-70025086 | MS.gene07235:intron |
| CCCACTAGAATGTTGGGATT+AGG | 0.379616 | 1.4:+70023418 | None:intergenic |
| TCCAAACACCATTTATGTTC+AGG | 0.394784 | 1.4:-70024888 | MS.gene07235:intron |
| GAAGGTGGGAGATGCTAAAA+AGG | 0.395703 | 1.4:-70024778 | MS.gene07235:intron |
| TTGTACCTGTTTCTTGGCTA+AGG | 0.398642 | 1.4:+70023695 | None:intergenic |
| GCAGAGTTTGACAACACATT+TGG | 0.404186 | 1.4:-70024196 | MS.gene07235:CDS |
| TTGTTAGGATGAGTTGTTGT+GGG | 0.416277 | 1.4:-70024299 | MS.gene07235:intron |
| ACCTGAACATAAATGGTGTT+TGG | 0.417646 | 1.4:+70024887 | None:intergenic |
| TTGGGAGAGACCAGAAGATA+TGG | 0.426795 | 1.4:-70024745 | MS.gene07235:CDS |
| GAGGACCAGATCAGCATGAT+AGG | 0.431517 | 1.4:-70023384 | MS.gene07235:CDS |
| GCTGGTGACAATGTCAAGTT+TGG | 0.431994 | 1.4:-70025046 | MS.gene07235:CDS |
| CCCCTGTGGTGTATCCTTTG+TGG | 0.441573 | 1.4:+70023520 | None:intergenic |
| GGAAAGATCCAGTGTTCAGC+AGG | 0.441814 | 1.4:-70023466 | MS.gene07235:CDS |
| CAAGTTAATGGTCAAATCCT+AGG | 0.446620 | 1.4:-70024223 | MS.gene07235:CDS |
| TGTTAGGTGGATTACTTGCT+AGG | 0.447232 | 1.4:-70023592 | MS.gene07235:intron |
| GTTTGACAACACATTTGGTT+GGG | 0.449029 | 1.4:-70024191 | MS.gene07235:CDS |
| GTTGGAGGGTATTATGATGC+TGG | 0.454607 | 1.4:-70025064 | MS.gene07235:CDS |
| ACGCACAACAGAATGTGATT+TGG | 0.456608 | 1.4:+70023755 | None:intergenic |
| GGAAACCTATCATGCTGATC+TGG | 0.457186 | 1.4:+70023379 | None:intergenic |
| TATGTTAATGCACCGCTTGT+GGG | 0.462838 | 1.4:-70023316 | MS.gene07235:CDS |
| TTTAGGAATTTCTAGTTCAA+AGG | 0.464717 | 1.4:-70024042 | MS.gene07235:intron |
| TTAGGAATTTCTAGTTCAAA+GGG | 0.464908 | 1.4:-70024041 | MS.gene07235:intron |
| CAGAACCTTAGCCAAGAAAC+AGG | 0.467748 | 1.4:-70023700 | MS.gene07235:intron |
| AGTTGTTGTGGGGTGCTGCT+TGG | 0.467899 | 1.4:-70024288 | MS.gene07235:CDS |
| ATGATAGGTTTCCAGATAAA+CGG | 0.470251 | 1.4:-70023369 | MS.gene07235:CDS |
| ATGTCATACATGGTGGGGTA+TGG | 0.473593 | 1.4:-70023553 | MS.gene07235:CDS |
| ACCATGTATGACATCTTCAA+TGG | 0.476433 | 1.4:+70023562 | None:intergenic |
| CGAATAGCTTCTCTAGCATT+AGG | 0.477541 | 1.4:+70024947 | None:intergenic |
| TGTAGGTTGATTTGGTTGGA+GGG | 0.478012 | 1.4:-70025078 | MS.gene07235:intron |
| TTATGTTAATGCACCGCTTG+TGG | 0.482152 | 1.4:-70023317 | MS.gene07235:CDS |
| GGTGCATTAACATAAGTTGC+TGG | 0.484029 | 1.4:+70023325 | None:intergenic |
| AGCAAACGAAATTGTCTGAA+TGG | 0.484341 | 1.4:+70023993 | None:intergenic |
| GGGATCATCACTTCCATCAA+TGG | 0.484639 | 1.4:-70023500 | MS.gene07235:CDS |
| TGAATGTAATTTAGGTACAT+TGG | 0.486981 | 1.4:+70024244 | None:intergenic |
| TGCTAGAGAAGCTATTCGTT+GGG | 0.488469 | 1.4:-70024942 | MS.gene07235:CDS |
| CTGAACACTGGATCTTTCCT+GGG | 0.491919 | 1.4:+70023470 | None:intergenic |
| CTAGTGGGTGCTGTTGTTGG+AGG | 0.494276 | 1.4:-70023403 | MS.gene07235:CDS |
| TGGAGTGTTATTGAGTTTGG+TGG | 0.494692 | 1.4:-70024989 | MS.gene07235:CDS |
| ACAGCACCCACTAGAATGTT+GGG | 0.494824 | 1.4:+70023412 | None:intergenic |
| ATGTAGGTTGATTTGGTTGG+AGG | 0.495740 | 1.4:-70025079 | MS.gene07235:intron |
| AGTTTGACAACACATTTGGT+TGG | 0.497629 | 1.4:-70024192 | MS.gene07235:CDS |
| TGTCAAACTCTGCAGCTCCT+AGG | 0.498646 | 1.4:+70024206 | None:intergenic |
| GCAGAAGAGGATTCAGCTCC+AGG | 0.498856 | 1.4:+70023962 | None:intergenic |
| CACTGAACCCTGCTGAACAC+TGG | 0.499935 | 1.4:+70023458 | None:intergenic |
| AACAGCACCCACTAGAATGT+TGG | 0.503023 | 1.4:+70023411 | None:intergenic |
| CACTAGAATGTTGGGATTAG+GGG | 0.507771 | 1.4:+70023420 | None:intergenic |
| AAAATCCCTCCATGACTACA+AGG | 0.507819 | 1.4:-70024017 | MS.gene07235:CDS |
| ATGCTAGAGAAGCTATTCGT+TGG | 0.512170 | 1.4:-70024943 | MS.gene07235:CDS |
| GGTTTCAAGACATTGCTGTA+AGG | 0.515521 | 1.4:+70024449 | None:intergenic |
| AGCAAGGATACTTCTTTCAA+AGG | 0.517132 | 1.4:-70024152 | MS.gene07235:intron |
| CTGAATGGCCCTTGTAGTCA+TGG | 0.518588 | 1.4:+70024008 | None:intergenic |
| CTTCTAACCAGAGAATGTCT+TGG | 0.519924 | 1.4:-70025223 | None:intergenic |
| CCCATTGAAGATGTCATACA+TGG | 0.526434 | 1.4:-70023563 | MS.gene07235:CDS |
| GGTTGGGATAACAAACATGT+TGG | 0.527280 | 1.4:-70024175 | MS.gene07235:CDS |
| TGTATCCTTTGTGGATACCT+TGG | 0.528138 | 1.4:+70023529 | None:intergenic |
| CCAGAGTAATCACAGTAAAA+GGG | 0.531097 | 1.4:+70024416 | None:intergenic |
| AAGATTGATGCAAATGCACC+TGG | 0.531369 | 1.4:-70024702 | MS.gene07235:CDS |
| TTTAGTGAGAAGGGCTATCA+GGG | 0.533210 | 1.4:-70024595 | MS.gene07235:intron |
| CCATGTATGACATCTTCAAT+GGG | 0.535756 | 1.4:+70023563 | None:intergenic |
| CTGGTCTCTCCCAACAAGCA+TGG | 0.538685 | 1.4:+70024754 | None:intergenic |
| ACAATGTAGGTTGATTTGGT+TGG | 0.544250 | 1.4:-70025082 | MS.gene07235:intron |
| CAGTAAAAGGGACAGACAAA+GGG | 0.548513 | 1.4:+70024428 | None:intergenic |
| GGAGTGTTATTGAGTTTGGT+GGG | 0.550172 | 1.4:-70024988 | MS.gene07235:CDS |
| GAGTTTGGTGGGTTGATGAA+AGG | 0.552870 | 1.4:-70024977 | MS.gene07235:CDS |
| ACAGTAAAAGGGACAGACAA+AGG | 0.562752 | 1.4:+70024427 | None:intergenic |
| CTTGTTAGGATGAGTTGTTG+TGG | 0.568257 | 1.4:-70024300 | MS.gene07235:intron |
| AAAGACTCTGGTCTCTCTGA+TGG | 0.569077 | 1.4:-70025197 | MS.gene07235:CDS |
| ATGTCTTGGAGAAAAGACTC+TGG | 0.573843 | 1.4:-70025209 | MS.gene07235:CDS |
| CCCTAATCCCAACATTCTAG+TGG | 0.580383 | 1.4:-70023419 | MS.gene07235:CDS |
| ATCCACAAAGGATACACCAC+AGG | 0.581594 | 1.4:-70023522 | MS.gene07235:CDS |
| TTGAAGATGTCATACATGGT+GGG | 0.582564 | 1.4:-70023559 | MS.gene07235:CDS |
| TGGGGTATATTGTGCAGAAG+AGG | 0.588731 | 1.4:+70023949 | None:intergenic |
| TCTGCAGCAACTTCAGAACC+AGG | 0.590338 | 1.4:+70024684 | None:intergenic |
| TCACATTCTGTTGTGCGTTG+TGG | 0.597476 | 1.4:-70023750 | MS.gene07235:CDS |
| CATTCTGTTGTGCGTTGTGG+TGG | 0.598006 | 1.4:-70023747 | MS.gene07235:CDS |
| TGAAGATGTCATACATGGTG+GGG | 0.604622 | 1.4:-70023558 | MS.gene07235:CDS |
| AACACTCCATGAAAGCATAG+TGG | 0.607639 | 1.4:+70025003 | None:intergenic |
| ATAACAAACATGTTGGAGCA+AGG | 0.610200 | 1.4:-70024168 | MS.gene07235:CDS |
| TAAGCAAGTGTTCCCACAAG+CGG | 0.616092 | 1.4:+70023304 | None:intergenic |
| AGCTACCAGTAAGAAGCTAG+TGG | 0.617412 | 1.4:+70023794 | None:intergenic |
| TCTTCTGCACAATATACCCC+AGG | 0.617991 | 1.4:-70023947 | MS.gene07235:intron |
| CCTAATCCCAACATTCTAGT+GGG | 0.618658 | 1.4:-70023418 | MS.gene07235:CDS |
| CCATCAATGGCTGTACACCC+AGG | 0.622472 | 1.4:-70023487 | MS.gene07235:CDS |
| ATAGTGGTAGTAAAAGCCAT+AGG | 0.628059 | 1.4:+70025019 | None:intergenic |
| ATGGCCCTTGTAGTCATGGA+GGG | 0.631433 | 1.4:+70024012 | None:intergenic |
| TGTTAGGATGAGTTGTTGTG+GGG | 0.636308 | 1.4:-70024298 | MS.gene07235:intron |
| ATTGAAGATGTCATACATGG+TGG | 0.647567 | 1.4:-70023560 | MS.gene07235:CDS |
| ACATGGTGGGGTATGGACCA+AGG | 0.656858 | 1.4:-70023546 | MS.gene07235:CDS |
| AATGGCCCTTGTAGTCATGG+AGG | 0.663344 | 1.4:+70024011 | None:intergenic |
| GAAAGATCCAGTGTTCAGCA+GGG | 0.676028 | 1.4:-70023465 | MS.gene07235:CDS |
| ATGGACCAAGGTATCCACAA+AGG | 0.706125 | 1.4:-70023534 | MS.gene07235:CDS |
| TCCACAAAGGATACACCACA+GGG | 0.706214 | 1.4:-70023521 | MS.gene07235:CDS |
| CAGTTTGCTGATCAACACAG+AGG | 0.707543 | 1.4:-70024473 | MS.gene07235:CDS |
| AAATCCCTCCATGACTACAA+GGG | 0.708720 | 1.4:-70024016 | MS.gene07235:CDS |
| ATGGAAGTGATGATCCCCTG+TGG | 0.783384 | 1.4:+70023506 | None:intergenic |
| CCACAAAGGATACACCACAG+GGG | 0.846463 | 1.4:-70023520 | MS.gene07235:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTTCATTATTTCAATT+AGG | + | chr1.4:70024821-70024840 | None:intergenic | 10.0% |
| !! | TGATGAAAAAAAATTAAAAA+TGG | - | chr1.4:70023926-70023945 | MS.gene07235:intron | 10.0% |
| !!! | TGATTTTGATTAATTTTTGT+TGG | - | chr1.4:70024863-70024882 | MS.gene07235:intron | 15.0% |
| !!! | ATATCTTTGTTGCTTATTTT+TGG | - | chr1.4:70023371-70023390 | MS.gene07235:CDS | 20.0% |
| !!! | CATTAACTTGAATGTAATTT+AGG | + | chr1.4:70024252-70024271 | None:intergenic | 20.0% |
| !!! | CATTTTTTTTTGTTTGTTTG+TGG | - | chr1.4:70024411-70024430 | MS.gene07235:CDS | 20.0% |
| !!! | CTAAATTACATTCAAGTTAA+TGG | - | chr1.4:70024250-70024269 | MS.gene07235:CDS | 20.0% |
| !!! | TTAATTTGTTTGATACTATG+TGG | + | chr1.4:70024371-70024390 | None:intergenic | 20.0% |
| !!! | TTTTGTTGGTATTTTTTGTT+AGG | - | chr1.4:70024877-70024896 | MS.gene07235:intron | 20.0% |
| ! | AAAACTAACCTGAACATAAA+TGG | + | chr1.4:70023608-70023627 | None:intergenic | 25.0% |
| ! | AATAGAGTTAAAACTGAAAG+AGG | + | chr1.4:70024571-70024590 | None:intergenic | 25.0% |
| ! | ATAGAGTTAAAACTGAAAGA+GGG | + | chr1.4:70024570-70024589 | None:intergenic | 25.0% |
| ! | TGAATGTAATTTAGGTACAT+TGG | + | chr1.4:70024244-70024263 | None:intergenic | 25.0% |
| !! | ATTTTGTTAAGGAGAAAACA+TGG | - | chr1.4:70023653-70023672 | MS.gene07235:intron | 25.0% |
| !!! | ACTAAAATTTTGGAGTATGT+TGG | + | chr1.4:70023876-70023895 | None:intergenic | 25.0% |
| !!! | ATTATAGTACTTTTGACTGA+TGG | - | chr1.4:70024151-70024170 | MS.gene07235:intron | 25.0% |
| !!! | TCTTTCAGTTTTAACTCTAT+TGG | - | chr1.4:70024570-70024589 | MS.gene07235:intron | 25.0% |
| !!! | TGGTTTTTGAGATTTTGTTA+AGG | - | chr1.4:70023642-70023661 | MS.gene07235:intron | 25.0% |
| !!! | TTAGGAATTTCTAGTTCAAA+GGG | - | chr1.4:70024444-70024463 | MS.gene07235:CDS | 25.0% |
| !!! | TTATAGTACTTTTGACTGAT+GGG | - | chr1.4:70024152-70024171 | MS.gene07235:intron | 25.0% |
| !!! | TTTAGGAATTTCTAGTTCAA+AGG | - | chr1.4:70024443-70024462 | MS.gene07235:CDS | 25.0% |
| !!! | TTTTTGGGTTTTTTGTTTGA+AGG | - | chr1.4:70023689-70023708 | MS.gene07235:intron | 25.0% |
| AGATTGTGTTTCTTTCTCTT+TGG | - | chr1.4:70023977-70023996 | MS.gene07235:CDS | 30.0% | |
| AGTATGACTCAAGTAAAAAC+TGG | + | chr1.4:70024127-70024146 | None:intergenic | 30.0% | |
| ATGATAGGTTTCCAGATAAA+CGG | - | chr1.4:70025116-70025135 | MS.gene07235:intron | 30.0% | |
| GATACTATGTGGTGAAATTT+AGG | + | chr1.4:70024360-70024379 | None:intergenic | 30.0% | |
| GATTGTGTTTCTTTCTCTTT+GGG | - | chr1.4:70023978-70023997 | MS.gene07235:CDS | 30.0% | |
| TCAATCTTGAAAACACTTCT+TGG | + | chr1.4:70023771-70023790 | None:intergenic | 30.0% | |
| TTGGCTTAAATGTACAATGT+AGG | - | chr1.4:70023390-70023409 | MS.gene07235:CDS | 30.0% | |
| ! | AGTTTTTCTTCTTCTGTTCA+TGG | - | chr1.4:70023622-70023641 | MS.gene07235:intron | 30.0% |
| !! | ACTCCAAAATTTTAGTGAGA+AGG | - | chr1.4:70023880-70023899 | MS.gene07235:intron | 30.0% |
| !! | ATGTACAATGTAGGTTGATT+TGG | - | chr1.4:70023399-70023418 | MS.gene07235:CDS | 30.0% |
| !! | ATGTGATTTGGTCAAGTATT+TGG | + | chr1.4:70024721-70024740 | None:intergenic | 30.0% |
| !! | CTCCAAAATTTTAGTGAGAA+GGG | - | chr1.4:70023881-70023900 | MS.gene07235:intron | 30.0% |
| !! | GGTAAATGAGGTTGATTTTT+GGG | - | chr1.4:70023674-70023693 | MS.gene07235:intron | 30.0% |
| !! | GTATTTTTGTACCTGTTTCT+TGG | + | chr1.4:70024799-70024818 | None:intergenic | 30.0% |
| !! | TGGTAAATGAGGTTGATTTT+TGG | - | chr1.4:70023673-70023692 | MS.gene07235:intron | 30.0% |
| !! | TTAACTCTATTGGTTTCATG+TGG | - | chr1.4:70024580-70024599 | MS.gene07235:intron | 30.0% |
| !!! | GTTTGTGGTTTTGTGATTTT+AGG | - | chr1.4:70024426-70024445 | MS.gene07235:CDS | 30.0% |
| !!! | TGTTGGTATTTTTTGTTAGG+TGG | - | chr1.4:70024880-70024899 | MS.gene07235:intron | 30.0% |
| ACCATGTATGACATCTTCAA+TGG | + | chr1.4:70024926-70024945 | None:intergenic | 35.0% | |
| ACCTGAACATAAATGGTGTT+TGG | + | chr1.4:70023601-70023620 | None:intergenic | 35.0% | |
| AGCAAACGAAATTGTCTGAA+TGG | + | chr1.4:70024495-70024514 | None:intergenic | 35.0% | |
| AGCAAGGATACTTCTTTCAA+AGG | - | chr1.4:70024333-70024352 | MS.gene07235:intron | 35.0% | |
| AGGAGAAAACATGGTAAATG+AGG | - | chr1.4:70023662-70023681 | MS.gene07235:intron | 35.0% | |
| AGTTTGACAACACATTTGGT+TGG | - | chr1.4:70024293-70024312 | MS.gene07235:CDS | 35.0% | |
| ATAACAAACATGTTGGAGCA+AGG | - | chr1.4:70024317-70024336 | MS.gene07235:intron | 35.0% | |
| ATAGTGGTAGTAAAAGCCAT+AGG | + | chr1.4:70023469-70023488 | None:intergenic | 35.0% | |
| ATTGAAGATGTCATACATGG+TGG | - | chr1.4:70024925-70024944 | MS.gene07235:CDS | 35.0% | |
| CAAGTTAATGGTCAAATCCT+AGG | - | chr1.4:70024262-70024281 | MS.gene07235:CDS | 35.0% | |
| CCAGAGTAATCACAGTAAAA+GGG | + | chr1.4:70024072-70024091 | None:intergenic | 35.0% | |
| CCATGTATGACATCTTCAAT+GGG | + | chr1.4:70024925-70024944 | None:intergenic | 35.0% | |
| GCTCAAAAACTGTTACAACT+TGG | + | chr1.4:70024607-70024626 | None:intergenic | 35.0% | |
| GTTTGACAACACATTTGGTT+GGG | - | chr1.4:70024294-70024313 | MS.gene07235:CDS | 35.0% | |
| TAAAAAGGACCATGCTTGTT+GGG | - | chr1.4:70023722-70023741 | MS.gene07235:CDS | 35.0% | |
| TCAAGTAAAAACTGGCACAA+TGG | + | chr1.4:70024119-70024138 | None:intergenic | 35.0% | |
| TCATAATCTGACCGTTTATC+TGG | + | chr1.4:70025130-70025149 | None:intergenic | 35.0% | |
| TCCAAACACCATTTATGTTC+AGG | - | chr1.4:70023597-70023616 | MS.gene07235:intron | 35.0% | |
| TTACTACCACTATGCTTTCA+TGG | - | chr1.4:70023476-70023495 | MS.gene07235:CDS | 35.0% | |
| TTCGTTTGCTCTTTAATTCC+TGG | - | chr1.4:70024505-70024524 | MS.gene07235:intron | 35.0% | |
| TTGAAGATGTCATACATGGT+GGG | - | chr1.4:70024926-70024945 | MS.gene07235:CDS | 35.0% | |
| TTGAGCTTGTGAAACTTTAC+AGG | - | chr1.4:70024621-70024640 | MS.gene07235:CDS | 35.0% | |
| TTGTTAGGATGAGTTGTTGT+GGG | - | chr1.4:70024186-70024205 | MS.gene07235:CDS | 35.0% | |
| ! | AGCCCTTCTCACTAAAATTT+TGG | + | chr1.4:70023886-70023905 | None:intergenic | 35.0% |
| ! | CCTTTTACTGTGATTACTCT+GGG | - | chr1.4:70024070-70024089 | MS.gene07235:intron | 35.0% |
| ! | GTTTCTTTCTCTTTGGGTTT+AGG | - | chr1.4:70023984-70024003 | MS.gene07235:CDS | 35.0% |
| ! | TCATGGAGTGTTATTGAGTT+TGG | - | chr1.4:70023493-70023512 | MS.gene07235:CDS | 35.0% |
| !! | ACAATGTAGGTTGATTTGGT+TGG | - | chr1.4:70023403-70023422 | MS.gene07235:CDS | 35.0% |
| !! | TGGGTTTGTAATGACTTGTT+AGG | - | chr1.4:70024171-70024190 | MS.gene07235:CDS | 35.0% |
| !!! | TGGGTTTTTTGTTTGAAGGT+GGG | - | chr1.4:70023693-70023712 | MS.gene07235:intron | 35.0% |
| !!! | TGTCAAGTTTGGTTTTCCTA+TGG | - | chr1.4:70023450-70023469 | MS.gene07235:CDS | 35.0% |
| !!! | TTGGGTTTTTTGTTTGAAGG+TGG | - | chr1.4:70023692-70023711 | MS.gene07235:intron | 35.0% |
| AAAATCCCTCCATGACTACA+AGG | - | chr1.4:70024468-70024487 | MS.gene07235:CDS | 40.0% | |
| AAATCCCTCCATGACTACAA+GGG | - | chr1.4:70024469-70024488 | MS.gene07235:CDS | 40.0% | |
| AAGATTGATGCAAATGCACC+TGG | - | chr1.4:70023783-70023802 | MS.gene07235:CDS | 40.0% | |
| ACAGTAAAAGGGACAGACAA+AGG | + | chr1.4:70024061-70024080 | None:intergenic | 40.0% | |
| ACGCACAACAGAATGTGATT+TGG | + | chr1.4:70024733-70024752 | None:intergenic | 40.0% | |
| AGCTTGTGAAACTTTACAGG+TGG | - | chr1.4:70024624-70024643 | MS.gene07235:CDS | 40.0% | |
| ATGCTAGAGAAGCTATTCGT+TGG | - | chr1.4:70023542-70023561 | MS.gene07235:CDS | 40.0% | |
| ATGTCTTGGAGAAAAGACTC+TGG | - | chr1.4:70023276-70023295 | MS.gene07235:CDS | 40.0% | |
| CACTAGAATGTTGGGATTAG+GGG | + | chr1.4:70025068-70025087 | None:intergenic | 40.0% | |
| CAGTAAAAGGGACAGACAAA+GGG | + | chr1.4:70024060-70024079 | None:intergenic | 40.0% | |
| CCACTAGAATGTTGGGATTA+GGG | + | chr1.4:70025069-70025088 | None:intergenic | 40.0% | |
| CCCAGAGTAATCACAGTAAA+AGG | + | chr1.4:70024073-70024092 | None:intergenic | 40.0% | |
| CCCATTGAAGATGTCATACA+TGG | - | chr1.4:70024922-70024941 | MS.gene07235:CDS | 40.0% | |
| CCTAATCCCAACATTCTAGT+GGG | - | chr1.4:70025067-70025086 | MS.gene07235:CDS | 40.0% | |
| CGAATAGCTTCTCTAGCATT+AGG | + | chr1.4:70023541-70023560 | None:intergenic | 40.0% | |
| CTAAAAAGGACCATGCTTGT+TGG | - | chr1.4:70023721-70023740 | MS.gene07235:CDS | 40.0% | |
| CTTGTTAGGATGAGTTGTTG+TGG | - | chr1.4:70024185-70024204 | MS.gene07235:CDS | 40.0% | |
| GCAGAGTTTGACAACACATT+TGG | - | chr1.4:70024289-70024308 | MS.gene07235:CDS | 40.0% | |
| GCTTATCTTGCACACTCATT+TGG | - | chr1.4:70025199-70025218 | MS.gene07235:CDS | 40.0% | |
| GCTTGTGAAACTTTACAGGT+GGG | - | chr1.4:70024625-70024644 | MS.gene07235:CDS | 40.0% | |
| GGTGCATTAACATAAGTTGC+TGG | + | chr1.4:70025163-70025182 | None:intergenic | 40.0% | |
| GGTTGGGATAACAAACATGT+TGG | - | chr1.4:70024310-70024329 | MS.gene07235:intron | 40.0% | |
| GGTTTCAAGACATTGCTGTA+AGG | + | chr1.4:70024039-70024058 | None:intergenic | 40.0% | |
| TATGTTAATGCACCGCTTGT+GGG | - | chr1.4:70025169-70025188 | MS.gene07235:intron | 40.0% | |
| TGAAGATGTCATACATGGTG+GGG | - | chr1.4:70024927-70024946 | MS.gene07235:CDS | 40.0% | |
| TGCTAGAGAAGCTATTCGTT+GGG | - | chr1.4:70023543-70023562 | MS.gene07235:CDS | 40.0% | |
| TGTATCCTTTGTGGATACCT+TGG | + | chr1.4:70024959-70024978 | None:intergenic | 40.0% | |
| TGTTAGGATGAGTTGTTGTG+GGG | - | chr1.4:70024187-70024206 | MS.gene07235:CDS | 40.0% | |
| TTATGTTAATGCACCGCTTG+TGG | - | chr1.4:70025168-70025187 | MS.gene07235:intron | 40.0% | |
| TTTAGTGAGAAGGGCTATCA+GGG | - | chr1.4:70023890-70023909 | MS.gene07235:intron | 40.0% | |
| ! | AACACTCCATGAAAGCATAG+TGG | + | chr1.4:70023485-70023504 | None:intergenic | 40.0% |
| ! | CCCTTTTACTGTGATTACTC+TGG | - | chr1.4:70024069-70024088 | MS.gene07235:intron | 40.0% |
| ! | GGAGTGTTATTGAGTTTGGT+GGG | - | chr1.4:70023497-70023516 | MS.gene07235:CDS | 40.0% |
| ! | TGGAGTGTTATTGAGTTTGG+TGG | - | chr1.4:70023496-70023515 | MS.gene07235:CDS | 40.0% |
| ! | TTGTACCTGTTTCTTGGCTA+AGG | + | chr1.4:70024793-70024812 | None:intergenic | 40.0% |
| ! | TTTTAGTGAGAAGGGCTATC+AGG | - | chr1.4:70023889-70023908 | MS.gene07235:intron | 40.0% |
| !! | ATGTAGGTTGATTTGGTTGG+AGG | - | chr1.4:70023406-70023425 | MS.gene07235:CDS | 40.0% |
| !! | GAGTCTCTTTGGTGTTACTA+TGG | + | chr1.4:70024766-70024785 | None:intergenic | 40.0% |
| !! | TGTAGGTTGATTTGGTTGGA+GGG | - | chr1.4:70023407-70023426 | MS.gene07235:CDS | 40.0% |
| !! | TGTTAGGTGGATTACTTGCT+AGG | - | chr1.4:70024893-70024912 | MS.gene07235:CDS | 40.0% |
| AAAGACTCTGGTCTCTCTGA+TGG | - | chr1.4:70023288-70023307 | MS.gene07235:CDS | 45.0% | |
| AACAGCACCCACTAGAATGT+TGG | + | chr1.4:70025077-70025096 | None:intergenic | 45.0% | |
| ACAGCACCCACTAGAATGTT+GGG | + | chr1.4:70025076-70025095 | None:intergenic | 45.0% | |
| AGCTACCAGTAAGAAGCTAG+TGG | + | chr1.4:70024694-70024713 | None:intergenic | 45.0% | |
| ATCCACAAAGGATACACCAC+AGG | - | chr1.4:70024963-70024982 | MS.gene07235:CDS | 45.0% | |
| CAGAACCTTAGCCAAGAAAC+AGG | - | chr1.4:70024785-70024804 | MS.gene07235:intron | 45.0% | |
| CCCACTAGAATGTTGGGATT+AGG | + | chr1.4:70025070-70025089 | None:intergenic | 45.0% | |
| CCCTAATCCCAACATTCTAG+TGG | - | chr1.4:70025066-70025085 | MS.gene07235:CDS | 45.0% | |
| CTGAACACTGGATCTTTCCT+GGG | + | chr1.4:70025018-70025037 | None:intergenic | 45.0% | |
| CTGTGATTACTCTGGGTATC+AGG | - | chr1.4:70024077-70024096 | MS.gene07235:intron | 45.0% | |
| GAAAGATCCAGTGTTCAGCA+GGG | - | chr1.4:70025020-70025039 | MS.gene07235:CDS | 45.0% | |
| GAAGGTGGGAGATGCTAAAA+AGG | - | chr1.4:70023707-70023726 | MS.gene07235:CDS | 45.0% | |
| GCTGGTGACAATGTCAAGTT+TGG | - | chr1.4:70023439-70023458 | MS.gene07235:CDS | 45.0% | |
| GGAAACCTATCATGCTGATC+TGG | + | chr1.4:70025109-70025128 | None:intergenic | 45.0% | |
| GGGATCATCACTTCCATCAA+TGG | - | chr1.4:70024985-70025004 | MS.gene07235:CDS | 45.0% | |
| TAAGCAAGTGTTCCCACAAG+CGG | + | chr1.4:70025184-70025203 | None:intergenic | 45.0% | |
| TCACATTCTGTTGTGCGTTG+TGG | - | chr1.4:70024735-70024754 | MS.gene07235:CDS | 45.0% | |
| TCCACAAAGGATACACCACA+GGG | - | chr1.4:70024964-70024983 | MS.gene07235:CDS | 45.0% | |
| TCTTCTGCACAATATACCCC+AGG | - | chr1.4:70024538-70024557 | MS.gene07235:intron | 45.0% | |
| TGCACAATATACCCCAGGTA+AGG | - | chr1.4:70024543-70024562 | MS.gene07235:intron | 45.0% | |
| TGGGGTATATTGTGCAGAAG+AGG | + | chr1.4:70024539-70024558 | None:intergenic | 45.0% | |
| TTGGGAGAGACCAGAAGATA+TGG | - | chr1.4:70023740-70023759 | MS.gene07235:CDS | 45.0% | |
| ! | ATGGACCAAGGTATCCACAA+AGG | - | chr1.4:70024951-70024970 | MS.gene07235:CDS | 45.0% |
| ! | ATGTCATACATGGTGGGGTA+TGG | - | chr1.4:70024932-70024951 | MS.gene07235:CDS | 45.0% |
| ! | CACATCCACTAGCTTCTTAC+TGG | - | chr1.4:70024686-70024705 | MS.gene07235:CDS | 45.0% |
| ! | CTTGGTGTGTCCATATCTTC+TGG | + | chr1.4:70023753-70023772 | None:intergenic | 45.0% |
| !! | ATTCTAGTGGGTGCTGTTGT+TGG | - | chr1.4:70025079-70025098 | MS.gene07235:intron | 45.0% |
| !! | CAGTTTGCTGATCAACACAG+AGG | - | chr1.4:70024012-70024031 | MS.gene07235:CDS | 45.0% |
| !! | GAGTTTGGTGGGTTGATGAA+AGG | - | chr1.4:70023508-70023527 | MS.gene07235:CDS | 45.0% |
| !! | GCTAAGGTTCTGAGTCTCTT+TGG | + | chr1.4:70024777-70024796 | None:intergenic | 45.0% |
| !! | GTTGGAGGGTATTATGATGC+TGG | - | chr1.4:70023421-70023440 | MS.gene07235:CDS | 45.0% |
| AATGGCCCTTGTAGTCATGG+AGG | + | chr1.4:70024477-70024496 | None:intergenic | 50.0% | |
| ACTGAAAGAGGGACCTTACC+TGG | + | chr1.4:70024559-70024578 | None:intergenic | 50.0% | |
| ATGGAAGTGATGATCCCCTG+TGG | + | chr1.4:70024982-70025001 | None:intergenic | 50.0% | |
| ATGGCCCTTGTAGTCATGGA+GGG | + | chr1.4:70024476-70024495 | None:intergenic | 50.0% | |
| CATTCTGTTGTGCGTTGTGG+TGG | - | chr1.4:70024738-70024757 | MS.gene07235:CDS | 50.0% | |
| CCACAAAGGATACACCACAG+GGG | - | chr1.4:70024965-70024984 | MS.gene07235:CDS | 50.0% | |
| CTGAAAGAGGGACCTTACCT+GGG | + | chr1.4:70024558-70024577 | None:intergenic | 50.0% | |
| CTGAATGGCCCTTGTAGTCA+TGG | + | chr1.4:70024480-70024499 | None:intergenic | 50.0% | |
| GAGGACCAGATCAGCATGAT+AGG | - | chr1.4:70025101-70025120 | MS.gene07235:intron | 50.0% | |
| GCTGAACACTGGATCTTTCC+TGG | + | chr1.4:70025019-70025038 | None:intergenic | 50.0% | |
| GGAAAGATCCAGTGTTCAGC+AGG | - | chr1.4:70025019-70025038 | MS.gene07235:CDS | 50.0% | |
| TCTGCAGCAACTTCAGAACC+AGG | + | chr1.4:70023804-70023823 | None:intergenic | 50.0% | |
| TGAAAGAGGGACCTTACCTG+GGG | + | chr1.4:70024557-70024576 | None:intergenic | 50.0% | |
| TGTCAAACTCTGCAGCTCCT+AGG | + | chr1.4:70024282-70024301 | None:intergenic | 50.0% | |
| CACTGAACCCTGCTGAACAC+TGG | + | chr1.4:70025030-70025049 | None:intergenic | 55.0% | |
| CCATCAATGGCTGTACACCC+AGG | - | chr1.4:70024998-70025017 | MS.gene07235:CDS | 55.0% | |
| CCCCTGTGGTGTATCCTTTG+TGG | + | chr1.4:70024968-70024987 | None:intergenic | 55.0% | |
| CCTGGGTGTACAGCCATTGA+TGG | + | chr1.4:70025001-70025020 | None:intergenic | 55.0% | |
| CTGGTCTCTCCCAACAAGCA+TGG | + | chr1.4:70023734-70023753 | None:intergenic | 55.0% | |
| GCAGAAGAGGATTCAGCTCC+AGG | + | chr1.4:70024526-70024545 | None:intergenic | 55.0% | |
| ! | ACATGGTGGGGTATGGACCA+AGG | - | chr1.4:70024939-70024958 | MS.gene07235:CDS | 55.0% |
| !! | AGTTGTTGTGGGGTGCTGCT+TGG | - | chr1.4:70024197-70024216 | MS.gene07235:CDS | 55.0% |
| !! | CTAGTGGGTGCTGTTGTTGG+AGG | - | chr1.4:70025082-70025101 | MS.gene07235:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 70023276 | 70025231 | 70023276 | ID=MS.gene07235 |
| chr1.4 | mRNA | 70023276 | 70025231 | 70023276 | ID=MS.gene07235.t1;Parent=MS.gene07235 |
| chr1.4 | exon | 70025184 | 70025231 | 70025184 | ID=MS.gene07235.t1.exon1;Parent=MS.gene07235.t1 |
| chr1.4 | CDS | 70025184 | 70025231 | 70025184 | ID=cds.MS.gene07235.t1;Parent=MS.gene07235.t1 |
| chr1.4 | exon | 70024889 | 70025095 | 70024889 | ID=MS.gene07235.t1.exon2;Parent=MS.gene07235.t1 |
| chr1.4 | CDS | 70024889 | 70025095 | 70024889 | ID=cds.MS.gene07235.t1;Parent=MS.gene07235.t1 |
| chr1.4 | exon | 70024596 | 70024796 | 70024596 | ID=MS.gene07235.t1.exon3;Parent=MS.gene07235.t1 |
| chr1.4 | CDS | 70024596 | 70024796 | 70024596 | ID=cds.MS.gene07235.t1;Parent=MS.gene07235.t1 |
| chr1.4 | exon | 70024409 | 70024501 | 70024409 | ID=MS.gene07235.t1.exon4;Parent=MS.gene07235.t1 |
| chr1.4 | CDS | 70024409 | 70024501 | 70024409 | ID=cds.MS.gene07235.t1;Parent=MS.gene07235.t1 |
| chr1.4 | exon | 70024153 | 70024314 | 70024153 | ID=MS.gene07235.t1.exon5;Parent=MS.gene07235.t1 |
| chr1.4 | CDS | 70024153 | 70024314 | 70024153 | ID=cds.MS.gene07235.t1;Parent=MS.gene07235.t1 |
| chr1.4 | exon | 70023948 | 70024059 | 70023948 | ID=MS.gene07235.t1.exon6;Parent=MS.gene07235.t1 |
| chr1.4 | CDS | 70023948 | 70024059 | 70023948 | ID=cds.MS.gene07235.t1;Parent=MS.gene07235.t1 |
| chr1.4 | exon | 70023701 | 70023864 | 70023701 | ID=MS.gene07235.t1.exon7;Parent=MS.gene07235.t1 |
| chr1.4 | CDS | 70023701 | 70023864 | 70023701 | ID=cds.MS.gene07235.t1;Parent=MS.gene07235.t1 |
| chr1.4 | exon | 70023276 | 70023608 | 70023276 | ID=MS.gene07235.t1.exon8;Parent=MS.gene07235.t1 |
| chr1.4 | CDS | 70023276 | 70023608 | 70023276 | ID=cds.MS.gene07235.t1;Parent=MS.gene07235.t1 |
| Gene Sequence |
| Protein sequence |
