Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81916.t1 | XP_003611061.1 | 92.1 | 468 | 20 | 2 | 2 | 452 | 27 | 494 | 1.20E-246 | 862.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81916.t1 | P22503 | 79.5 | 469 | 78 | 3 | 1 | 451 | 25 | 493 | 8.0e-218 | 758.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81916.t1 | G7KC03 | 92.1 | 468 | 20 | 2 | 2 | 452 | 27 | 494 | 9.0e-247 | 862.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene81916 | 0.806206 | 9.21E-50 | -1.69E-46 |
| MS.gene049396 | MS.gene81916 | 0.802483 | 5.49E-49 | -1.69E-46 |
| MS.gene050122 | MS.gene81916 | 0.801654 | 8.13E-49 | -1.69E-46 |
| MS.gene050502 | MS.gene81916 | 0.809708 | 1.66E-50 | -1.69E-46 |
| MS.gene050520 | MS.gene81916 | 0.809349 | 1.98E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene81916 | 0.828062 | 1.11E-54 | -1.69E-46 |
| MS.gene050772 | MS.gene81916 | 0.810331 | 1.22E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene81916 | 0.822826 | 1.92E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene81916 | 0.825666 | 4.14E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene81916 | 0.810394 | 1.18E-50 | -1.69E-46 |
| MS.gene051438 | MS.gene81916 | 0.808196 | 3.49E-50 | -1.69E-46 |
| MS.gene051509 | MS.gene81916 | 0.80133 | 9.47E-49 | -1.69E-46 |
| MS.gene051941 | MS.gene81916 | 0.809072 | 2.27E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene81916 | 0.811839 | 5.73E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene81916 | 0.805048 | 1.61E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene81916 | 0.802067 | 6.69E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene81916 | 0.801227 | 9.95E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene81916 | 0.802895 | 4.52E-49 | -1.69E-46 |
| MS.gene053318 | MS.gene81916 | 0.810684 | 1.02E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene81916 | 0.823776 | 1.15E-53 | -1.69E-46 |
| MS.gene053505 | MS.gene81916 | 0.809763 | 1.61E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene81916 | 0.831607 | 1.52E-55 | -1.69E-46 |
| MS.gene053626 | MS.gene81916 | 0.855999 | 4.33E-62 | -1.69E-46 |
| MS.gene053824 | MS.gene81916 | 0.832426 | 9.52E-56 | -1.69E-46 |
| MS.gene054408 | MS.gene81916 | 0.807667 | 4.52E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene81916 | 0.825386 | 4.82E-54 | -1.69E-46 |
| MS.gene054927 | MS.gene81916 | 0.810447 | 1.15E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene81916 | 0.801567 | 8.47E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene81916 | 0.807202 | 5.67E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene81916 | 0.801676 | 8.05E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene81916 | 0.821861 | 3.22E-53 | -1.69E-46 |
| MS.gene055909 | MS.gene81916 | 0.841817 | 3.78E-58 | -1.69E-46 |
| MS.gene055911 | MS.gene81916 | 0.841536 | 4.48E-58 | -1.69E-46 |
| MS.gene05601 | MS.gene81916 | 0.825622 | 4.24E-54 | -1.69E-46 |
| MS.gene056166 | MS.gene81916 | 0.82556 | 4.39E-54 | -1.69E-46 |
| MS.gene056448 | MS.gene81916 | 0.800747 | 1.25E-48 | -1.69E-46 |
| MS.gene056510 | MS.gene81916 | 0.808372 | 3.20E-50 | -1.69E-46 |
| MS.gene056878 | MS.gene81916 | 0.812095 | 5.04E-51 | -1.69E-46 |
| MS.gene057019 | MS.gene81916 | 0.809078 | 2.26E-50 | -1.69E-46 |
| MS.gene057086 | MS.gene81916 | 0.805622 | 1.22E-49 | -1.69E-46 |
| MS.gene057289 | MS.gene81916 | 0.805357 | 1.39E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene81916 | 0.837901 | 3.95E-57 | -1.69E-46 |
| MS.gene05787 | MS.gene81916 | 0.838002 | 3.72E-57 | -1.69E-46 |
| MS.gene058120 | MS.gene81916 | 0.80531 | 1.42E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene81916 | 0.806661 | 7.38E-50 | -1.69E-46 |
| MS.gene058948 | MS.gene81916 | 0.819169 | 1.34E-52 | -1.69E-46 |
| MS.gene059367 | MS.gene81916 | 0.827355 | 1.64E-54 | -1.69E-46 |
| MS.gene059368 | MS.gene81916 | 0.833276 | 5.85E-56 | -1.69E-46 |
| MS.gene059517 | MS.gene81916 | 0.809198 | 2.13E-50 | -1.69E-46 |
| MS.gene059667 | MS.gene81916 | 0.804109 | 2.53E-49 | -1.69E-46 |
| MS.gene059680 | MS.gene81916 | 0.834772 | 2.47E-56 | -1.69E-46 |
| MS.gene059711 | MS.gene81916 | 0.808371 | 3.20E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene81916 | 0.803536 | 3.33E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene81916 | 0.833708 | 4.57E-56 | -1.69E-46 |
| MS.gene060778 | MS.gene81916 | 0.808129 | 3.60E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene81916 | 0.846573 | 1.99E-59 | -1.69E-46 |
| MS.gene06097 | MS.gene81916 | 0.855501 | 6.05E-62 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81916.t1 | MTR_5g010000 | 92.094 | 468 | 20 | 2 | 2 | 452 | 27 | 494 | 0.0 | 834 |
| MS.gene81916.t1 | MTR_5g009970 | 82.090 | 469 | 67 | 2 | 1 | 452 | 27 | 495 | 0.0 | 768 |
| MS.gene81916.t1 | MTR_5g009970 | 85.749 | 414 | 58 | 1 | 40 | 452 | 8 | 421 | 0.0 | 719 |
| MS.gene81916.t1 | MTR_5g009970 | 85.533 | 394 | 56 | 1 | 60 | 452 | 1 | 394 | 0.0 | 679 |
| MS.gene81916.t1 | MTR_5g009970 | 85.583 | 326 | 46 | 1 | 128 | 452 | 1 | 326 | 0.0 | 553 |
| MS.gene81916.t1 | MTR_3g080810 | 52.155 | 464 | 193 | 7 | 15 | 452 | 35 | 495 | 2.37e-164 | 479 |
| MS.gene81916.t1 | MTR_1g088190 | 51.116 | 448 | 205 | 6 | 12 | 450 | 36 | 478 | 4.57e-155 | 455 |
| MS.gene81916.t1 | MTR_3g117500 | 48.414 | 473 | 215 | 6 | 6 | 451 | 15 | 485 | 1.47e-153 | 451 |
| MS.gene81916.t1 | MTR_8g104820 | 48.180 | 467 | 209 | 9 | 11 | 448 | 26 | 488 | 1.00e-151 | 447 |
| MS.gene81916.t1 | MTR_5g085730 | 46.570 | 481 | 221 | 8 | 6 | 453 | 22 | 499 | 6.70e-150 | 443 |
| MS.gene81916.t1 | MTR_3g080190 | 46.960 | 477 | 217 | 8 | 11 | 454 | 36 | 509 | 1.75e-147 | 437 |
| MS.gene81916.t1 | MTR_5g093590 | 47.357 | 473 | 214 | 9 | 14 | 453 | 33 | 503 | 1.54e-144 | 429 |
| MS.gene81916.t1 | MTR_3g105230 | 45.740 | 446 | 222 | 5 | 12 | 440 | 27 | 469 | 1.83e-143 | 425 |
| MS.gene81916.t1 | MTR_3g010330 | 47.863 | 468 | 216 | 8 | 9 | 452 | 19 | 482 | 2.15e-143 | 425 |
| MS.gene81916.t1 | MTR_4g035955 | 46.452 | 465 | 224 | 5 | 5 | 448 | 4 | 464 | 8.82e-143 | 423 |
| MS.gene81916.t1 | MTR_3g023740 | 46.522 | 460 | 226 | 5 | 12 | 454 | 27 | 483 | 1.04e-142 | 423 |
| MS.gene81916.t1 | MTR_8g099410 | 46.835 | 474 | 216 | 8 | 11 | 452 | 24 | 493 | 4.51e-141 | 421 |
| MS.gene81916.t1 | MTR_8g099410 | 44.933 | 523 | 245 | 10 | 11 | 501 | 24 | 535 | 4.61e-141 | 424 |
| MS.gene81916.t1 | MTR_4g035930 | 45.934 | 455 | 221 | 5 | 15 | 448 | 15 | 465 | 5.88e-141 | 418 |
| MS.gene81916.t1 | MTR_4g035975 | 45.494 | 466 | 219 | 7 | 14 | 448 | 26 | 487 | 2.01e-138 | 413 |
| MS.gene81916.t1 | MTR_4g074960 | 46.383 | 470 | 215 | 8 | 14 | 450 | 27 | 492 | 9.71e-138 | 416 |
| MS.gene81916.t1 | MTR_1g037340 | 46.304 | 460 | 220 | 7 | 15 | 450 | 25 | 481 | 6.67e-131 | 393 |
| MS.gene81916.t1 | MTR_3g113720 | 42.060 | 466 | 236 | 6 | 16 | 451 | 58 | 519 | 8.24e-120 | 366 |
| MS.gene81916.t1 | MTR_8g075990 | 42.612 | 467 | 234 | 6 | 16 | 452 | 64 | 526 | 1.34e-115 | 355 |
| MS.gene81916.t1 | MTR_5g010010 | 95.139 | 144 | 7 | 0 | 481 | 624 | 13 | 156 | 6.21e-95 | 291 |
| MS.gene81916.t1 | MTR_2g028480 | 38.493 | 491 | 239 | 12 | 15 | 452 | 111 | 591 | 3.20e-90 | 292 |
| MS.gene81916.t1 | MTR_3g090540 | 35.992 | 489 | 248 | 16 | 15 | 450 | 107 | 583 | 2.10e-88 | 287 |
| MS.gene81916.t1 | MTR_1g088190 | 51.027 | 292 | 130 | 5 | 12 | 294 | 36 | 323 | 2.45e-88 | 278 |
| MS.gene81916.t1 | MTR_3g082440 | 36.680 | 488 | 248 | 14 | 15 | 453 | 116 | 591 | 4.54e-84 | 276 |
| MS.gene81916.t1 | MTR_7g108925 | 47.771 | 157 | 81 | 1 | 294 | 450 | 43 | 198 | 1.69e-49 | 172 |
| MS.gene81916.t1 | MTR_1g037320 | 48.447 | 161 | 78 | 2 | 60 | 216 | 1 | 160 | 1.31e-39 | 147 |
| MS.gene81916.t1 | MTR_1g037320 | 51.639 | 122 | 57 | 2 | 328 | 448 | 169 | 289 | 3.47e-32 | 126 |
| MS.gene81916.t1 | MTR_0393s0050 | 48.966 | 145 | 72 | 2 | 294 | 437 | 20 | 163 | 1.03e-38 | 141 |
| MS.gene81916.t1 | MTR_7g053480 | 68.317 | 101 | 32 | 0 | 469 | 569 | 1 | 101 | 1.18e-35 | 130 |
| MS.gene81916.t1 | MTR_4g128810 | 43.046 | 151 | 80 | 2 | 303 | 453 | 189 | 333 | 5.60e-31 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81916.t1 | AT4G23560 | 68.683 | 463 | 129 | 1 | 5 | 451 | 13 | 475 | 0.0 | 642 |
| MS.gene81916.t1 | AT4G09740 | 67.603 | 463 | 134 | 1 | 5 | 451 | 13 | 475 | 0.0 | 633 |
| MS.gene81916.t1 | AT1G02800 | 52.916 | 463 | 188 | 7 | 13 | 450 | 41 | 498 | 9.88e-165 | 480 |
| MS.gene81916.t1 | AT4G02290 | 50.000 | 462 | 203 | 6 | 12 | 448 | 49 | 507 | 3.29e-158 | 464 |
| MS.gene81916.t1 | AT1G23210 | 49.251 | 467 | 207 | 7 | 5 | 445 | 18 | 480 | 1.06e-156 | 459 |
| MS.gene81916.t1 | AT1G70710 | 49.565 | 460 | 204 | 6 | 11 | 445 | 24 | 480 | 6.85e-156 | 457 |
| MS.gene81916.t1 | AT4G39010 | 48.827 | 469 | 210 | 7 | 8 | 448 | 22 | 488 | 9.75e-154 | 452 |
| MS.gene81916.t1 | AT1G22880 | 48.596 | 463 | 211 | 7 | 9 | 448 | 18 | 476 | 1.78e-146 | 433 |
| MS.gene81916.t1 | AT1G71380 | 49.353 | 464 | 208 | 7 | 8 | 448 | 17 | 476 | 2.05e-145 | 431 |
| MS.gene81916.t1 | AT2G32990 | 45.279 | 466 | 223 | 7 | 14 | 448 | 38 | 502 | 4.42e-142 | 423 |
| MS.gene81916.t1 | AT3G43860 | 47.020 | 453 | 220 | 5 | 15 | 450 | 34 | 483 | 1.47e-140 | 418 |
| MS.gene81916.t1 | AT3G43860 | 47.020 | 453 | 220 | 5 | 15 | 450 | 34 | 483 | 1.47e-140 | 418 |
| MS.gene81916.t1 | AT4G11050 | 45.127 | 472 | 223 | 8 | 12 | 451 | 23 | 490 | 4.44e-138 | 414 |
| MS.gene81916.t1 | AT4G11050 | 45.127 | 472 | 223 | 8 | 12 | 451 | 23 | 490 | 2.54e-137 | 414 |
| MS.gene81916.t1 | AT4G11050 | 45.127 | 472 | 223 | 8 | 12 | 451 | 23 | 490 | 2.67e-137 | 414 |
| MS.gene81916.t1 | AT4G39000 | 45.376 | 465 | 220 | 8 | 14 | 448 | 24 | 484 | 9.86e-136 | 406 |
| MS.gene81916.t1 | AT1G64390 | 44.798 | 471 | 224 | 8 | 12 | 450 | 22 | 488 | 1.45e-135 | 410 |
| MS.gene81916.t1 | AT4G38990 | 44.374 | 471 | 229 | 7 | 10 | 448 | 18 | 487 | 1.14e-132 | 398 |
| MS.gene81916.t1 | AT4G02290 | 48.744 | 398 | 192 | 5 | 60 | 448 | 1 | 395 | 2.45e-132 | 394 |
| MS.gene81916.t1 | AT2G44570 | 45.923 | 466 | 223 | 8 | 11 | 450 | 29 | 491 | 3.32e-132 | 397 |
| MS.gene81916.t1 | AT1G48930 | 47.957 | 465 | 210 | 7 | 14 | 448 | 29 | 491 | 4.09e-132 | 401 |
| MS.gene81916.t1 | AT2G44540 | 45.887 | 462 | 222 | 7 | 15 | 451 | 33 | 491 | 1.92e-130 | 392 |
| MS.gene81916.t1 | AT2G44560 | 46.204 | 461 | 220 | 7 | 15 | 450 | 33 | 490 | 5.56e-129 | 389 |
| MS.gene81916.t1 | AT2G44550 | 44.444 | 477 | 228 | 10 | 1 | 451 | 25 | 490 | 1.26e-126 | 382 |
| MS.gene81916.t1 | AT1G19940 | 44.420 | 457 | 224 | 5 | 15 | 445 | 48 | 500 | 6.42e-125 | 379 |
| MS.gene81916.t1 | AT1G19940 | 44.420 | 457 | 224 | 5 | 15 | 445 | 48 | 500 | 6.42e-125 | 379 |
| MS.gene81916.t1 | AT1G22880 | 48.485 | 396 | 193 | 6 | 60 | 448 | 1 | 392 | 2.54e-123 | 370 |
| MS.gene81916.t1 | AT1G75680 | 45.154 | 454 | 215 | 7 | 16 | 441 | 58 | 505 | 1.64e-120 | 368 |
| MS.gene81916.t1 | AT4G39010 | 45.109 | 368 | 172 | 7 | 8 | 347 | 22 | 387 | 6.14e-105 | 323 |
| MS.gene81916.t1 | AT2G44570 | 42.063 | 378 | 191 | 7 | 11 | 363 | 29 | 403 | 8.99e-89 | 282 |
| MS.gene81916.t1 | AT5G49720 | 37.959 | 490 | 243 | 12 | 15 | 452 | 108 | 588 | 1.08e-87 | 285 |
| MS.gene81916.t1 | AT1G19940 | 42.222 | 360 | 182 | 4 | 15 | 348 | 48 | 407 | 7.76e-86 | 275 |
| MS.gene81916.t1 | AT1G22880 | 47.249 | 309 | 137 | 6 | 9 | 294 | 18 | 323 | 3.41e-84 | 267 |
| MS.gene81916.t1 | AT4G24260 | 37.475 | 491 | 244 | 12 | 15 | 452 | 108 | 588 | 5.23e-84 | 276 |
| MS.gene81916.t1 | AT1G65610 | 34.286 | 490 | 261 | 14 | 15 | 454 | 116 | 594 | 9.29e-82 | 270 |
| MS.gene81916.t1 | AT4G38990 | 39.826 | 344 | 167 | 6 | 10 | 332 | 18 | 342 | 4.09e-71 | 233 |
| MS.gene81916.t1 | AT1G63970 | 82.292 | 96 | 17 | 0 | 529 | 624 | 59 | 154 | 3.73e-53 | 179 |
| MS.gene81916.t1 | AT1G63970 | 82.292 | 96 | 17 | 0 | 529 | 624 | 59 | 154 | 2.01e-51 | 177 |
| MS.gene81916.t1 | AT4G24260 | 34.625 | 387 | 194 | 11 | 15 | 348 | 108 | 488 | 7.22e-48 | 175 |
| MS.gene81916.t1 | AT4G24260 | 39.510 | 286 | 124 | 8 | 15 | 255 | 108 | 389 | 4.78e-44 | 164 |
| MS.gene81916.t1 | AT3G42153 | 58.696 | 92 | 34 | 1 | 205 | 292 | 16 | 107 | 4.27e-30 | 115 |
Find 148 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGGTTATCCTTTAATTAT+TGG | 0.154047 | 6.4:-55810997 | MS.gene81916:CDS |
| TTAATTCCACCAATAATTAA+AGG | 0.221109 | 6.4:+55810988 | None:intergenic |
| ATGTCATACATGGTGGGATA+TGG | 0.230083 | 6.4:-55813118 | MS.gene81916:CDS |
| ATGAAAAGGATGAACTATTA+TGG | 0.237262 | 6.4:-55813917 | MS.gene81916:intron |
| CCAGAGTACGAGCAGTAAAA+TGG | 0.238707 | 6.4:+55814042 | None:intergenic |
| AACTATTATGGGCTGCTTCT+TGG | 0.270350 | 6.4:-55813905 | MS.gene81916:CDS |
| TCACTGTTTGTTTCAGCTTC+AGG | 0.284381 | 6.4:-55811132 | MS.gene81916:CDS |
| TCAGCTGCAGCCTCAGTTCC+AGG | 0.287596 | 6.4:+55814432 | None:intergenic |
| TTGTATTGGTCATTAGAATT+TGG | 0.289530 | 6.4:+55812944 | None:intergenic |
| CCCACATGAATATTAGGATT+TGG | 0.290939 | 6.4:+55812983 | None:intergenic |
| CTGCTCGTACTCTGGTTATC+AGG | 0.293044 | 6.4:-55814034 | MS.gene81916:intron |
| TCAATCTTGTAAGTTGTTCT+TGG | 0.295072 | 6.4:+55814465 | None:intergenic |
| CCTCTGTGATGTAATTGTTT+TGG | 0.305598 | 6.4:+55813085 | None:intergenic |
| AAAGAATAAGAGAATGGAAT+TGG | 0.329681 | 6.4:+55811195 | None:intergenic |
| CTTGGTGTATCCATGTCTTC+TGG | 0.334811 | 6.4:+55814483 | None:intergenic |
| TTAACAGAATTAAGCATTGC+AGG | 0.342401 | 6.4:+55811807 | None:intergenic |
| ACATAGGTGGACTACATATT+AGG | 0.343969 | 6.4:-55813157 | MS.gene81916:intron |
| ATCTGTAGAGAGCTACTTCC+TGG | 0.344038 | 6.4:+55813555 | None:intergenic |
| ATAGCACCCACATGAATATT+AGG | 0.348295 | 6.4:+55812977 | None:intergenic |
| GTGTCATTGGCAGGTGGATT+TGG | 0.356090 | 6.4:-55814871 | MS.gene81916:intron |
| CATTGGCAGGTGGATTTGGT+TGG | 0.371328 | 6.4:-55814867 | MS.gene81916:intron |
| TCTTCGCAGTGCTATTCGTT+GGG | 0.375871 | 6.4:-55814721 | MS.gene81916:CDS |
| GCTTTAGGTCTTCCTGATAT+AGG | 0.382227 | 6.4:-55809963 | MS.gene81916:CDS |
| TTGAAGGAGTAGCGGAGATT+GGG | 0.383157 | 6.4:+55811070 | None:intergenic |
| AGCTGGGATAACAAATTTGT+TGG | 0.384877 | 6.4:-55813801 | MS.gene81916:CDS |
| TTTGAAGGAGTAGCGGAGAT+TGG | 0.395299 | 6.4:+55811069 | None:intergenic |
| CAGATCTTGCATCATTGTAT+TGG | 0.398459 | 6.4:+55812930 | None:intergenic |
| GGTTCTGTTGCAGCTTTGCT+TGG | 0.409254 | 6.4:-55812860 | MS.gene81916:intron |
| CACCATGTATGACATCTTCA+TGG | 0.417078 | 6.4:+55813126 | None:intergenic |
| TCATTGCACCCCACTTTGGC+AGG | 0.417272 | 6.4:+55813034 | None:intergenic |
| TTCACCATCAGTCTTAATCT+TGG | 0.417439 | 6.4:+55813599 | None:intergenic |
| ATCTTCGCAGTGCTATTCGT+TGG | 0.429802 | 6.4:-55814722 | MS.gene81916:CDS |
| CACTTCACTCTTTGGTCCTT+AGG | 0.430996 | 6.4:+55815067 | None:intergenic |
| AAGAATAAGAGAATGGAATT+GGG | 0.439995 | 6.4:+55811196 | None:intergenic |
| ATCGATTTCAACTGAGGCTG+TGG | 0.440478 | 6.4:+55811098 | None:intergenic |
| GAATTGGGTGAGAAGATTTG+AGG | 0.443328 | 6.4:+55811211 | None:intergenic |
| TGGCAGGTGGATTTGGTTGG+AGG | 0.444755 | 6.4:-55814864 | MS.gene81916:intron |
| GTGGAAGGGTTGTGATTCTT+CGG | 0.447373 | 6.4:-55809913 | MS.gene81916:CDS |
| TGAAAAGGATGAACTATTAT+GGG | 0.456313 | 6.4:-55813916 | MS.gene81916:intron |
| TGGAACTGAGGCTGCAGCTG+AGG | 0.459683 | 6.4:-55814430 | MS.gene81916:CDS |
| GGTTATCCTTTAATTATTGG+TGG | 0.460157 | 6.4:-55810994 | MS.gene81916:CDS |
| AGAATATACTCACAGATTCA+TGG | 0.463953 | 6.4:+55809883 | None:intergenic |
| ATTCATGTGGGTGCTATTGT+TGG | 0.466637 | 6.4:-55812971 | MS.gene81916:CDS |
| AAGCAGTGTCTGAATTCAGC+TGG | 0.468104 | 6.4:-55813818 | MS.gene81916:CDS |
| GAAACGCAGATCATAATTGT+TGG | 0.470658 | 6.4:-55814512 | MS.gene81916:CDS |
| TAGATGAAGAGAAATAGTTC+TGG | 0.473162 | 6.4:+55813008 | None:intergenic |
| GCGGGTGATAATGTGAAGTT+TGG | 0.476392 | 6.4:-55814831 | MS.gene81916:CDS |
| AGAGGAAAAGAATAAGAGAA+TGG | 0.478928 | 6.4:+55811189 | None:intergenic |
| GCCATCATTGCACCCCACTT+TGG | 0.479110 | 6.4:+55813030 | None:intergenic |
| TTGAGATATGATTGAAGGGA+TGG | 0.481296 | 6.4:+55813057 | None:intergenic |
| TTACGGTGAGCTTGTTGAGT+TGG | 0.481846 | 6.4:-55814794 | MS.gene81916:CDS |
| GCCAAAGTGGGGTGCAATGA+TGG | 0.482616 | 6.4:-55813031 | MS.gene81916:CDS |
| GCAGGTTGAGATATGATTGA+AGG | 0.483094 | 6.4:+55813052 | None:intergenic |
| AAACCATGGCCAACCCGAAA+AGG | 0.483370 | 6.4:+55811039 | None:intergenic |
| TGCAAAGGCTCTAATTTCAG+AGG | 0.483766 | 6.4:+55813264 | None:intergenic |
| TGTCATACATGGTGGGATAT+GGG | 0.486645 | 6.4:-55813117 | MS.gene81916:CDS |
| TAGCACCATGGTTGAGGTTG+TGG | 0.489282 | 6.4:+55813357 | None:intergenic |
| CAGAGTACGAGCAGTAAAAT+GGG | 0.494790 | 6.4:+55814043 | None:intergenic |
| TTCCACTTAGGATCAGAATC+AGG | 0.496430 | 6.4:+55809930 | None:intergenic |
| ATATGAAAGTGAGATTTCTT+CGG | 0.496777 | 6.4:-55814760 | MS.gene81916:CDS |
| GACCTTCATCGATTGGAACC+TGG | 0.499572 | 6.4:-55811015 | MS.gene81916:CDS |
| AACAAAAGCAGCATTCATAT+AGG | 0.500246 | 6.4:+55812883 | None:intergenic |
| AAGATTGATTCGAATTCCCC+TGG | 0.503739 | 6.4:-55814450 | MS.gene81916:CDS |
| ACACTGCTTGACTCCAACCT+TGG | 0.505167 | 6.4:+55813832 | None:intergenic |
| AATTGGGTGAGAAGATTTGA+GGG | 0.505339 | 6.4:+55811212 | None:intergenic |
| CGAAAAGGAAGAACCTTTGA+AGG | 0.510185 | 6.4:+55811054 | None:intergenic |
| GGAATTCTATGGCGGGAAGA+AGG | 0.510525 | 6.4:-55813628 | MS.gene81916:CDS |
| ATTAATATACCTCATGATAG+AGG | 0.512773 | 6.4:-55810970 | MS.gene81916:CDS |
| TTTATATGTGCATTGATGCC+AGG | 0.514115 | 6.4:-55813573 | MS.gene81916:CDS |
| GTGATAATGTGAAGTTTGGT+TGG | 0.518804 | 6.4:-55814827 | MS.gene81916:CDS |
| AATGAATAGCACCATGGTTG+AGG | 0.521095 | 6.4:+55813351 | None:intergenic |
| CAGCTGCAGCCTCAGTTCCA+GGG | 0.523289 | 6.4:+55814433 | None:intergenic |
| GGCTGCTTCTTGGCTATACA+AGG | 0.523550 | 6.4:-55813895 | MS.gene81916:CDS |
| AAACGCAGATCATAATTGTT+GGG | 0.523983 | 6.4:-55814511 | MS.gene81916:CDS |
| GATTTGAGGGATGCTGTGAA+TGG | 0.528006 | 6.4:+55811225 | None:intergenic |
| CATGTGGGTGCTATTGTTGG+AGG | 0.529821 | 6.4:-55812968 | MS.gene81916:CDS |
| CAAATATAGAGGTTCTTACT+CGG | 0.533103 | 6.4:-55814073 | MS.gene81916:CDS |
| GTTGGAGGATACTACGACGC+GGG | 0.534176 | 6.4:-55814849 | MS.gene81916:CDS |
| TTCCTGATTCTGATCCTAAG+TGG | 0.534340 | 6.4:-55809932 | MS.gene81916:CDS |
| ATGATTTGAGATGGAGGGTA+TGG | 0.536370 | 6.4:+55811160 | None:intergenic |
| TAGAGCCTTTGCAAAATCAC+AGG | 0.537879 | 6.4:-55813254 | MS.gene81916:intron |
| ATTTGAGGGATGCTGTGAAT+GGG | 0.539239 | 6.4:+55811226 | None:intergenic |
| CATATCTCAACCTGCCAAAG+TGG | 0.541021 | 6.4:-55813044 | MS.gene81916:CDS |
| CTTGGCTATACAAGGCTAGT+GGG | 0.541408 | 6.4:-55813887 | MS.gene81916:CDS |
| ATATCTCAACCTGCCAAAGT+GGG | 0.542805 | 6.4:-55813043 | MS.gene81916:CDS |
| TCGATTTCAACTGAGGCTGT+GGG | 0.542972 | 6.4:+55811099 | None:intergenic |
| TCCAAATCCTAATATTCATG+TGG | 0.544345 | 6.4:-55812984 | MS.gene81916:CDS |
| CCAATAATTAAAGGATAACC+AGG | 0.547141 | 6.4:+55810997 | None:intergenic |
| TTCGAATTCCCCTGGAACTG+AGG | 0.548903 | 6.4:-55814442 | MS.gene81916:CDS |
| CTTCGCAGTGCTATTCGTTG+GGG | 0.551133 | 6.4:-55814720 | MS.gene81916:CDS |
| GAATCACAACCCTTCCACTT+AGG | 0.553850 | 6.4:+55809918 | None:intergenic |
| TGATTCTGATCCTAAGTGGA+AGG | 0.553947 | 6.4:-55809928 | MS.gene81916:CDS |
| AATCTCCGCTACTCCTTCAA+AGG | 0.556988 | 6.4:-55811067 | MS.gene81916:CDS |
| CACTGCGAAGATAATCAAGC+TGG | 0.565610 | 6.4:+55814733 | None:intergenic |
| AACCAGGTTCCAATCGATGA+AGG | 0.565616 | 6.4:+55811013 | None:intergenic |
| AAATATAGAGGTTCTTACTC+GGG | 0.568349 | 6.4:-55814072 | MS.gene81916:CDS |
| GCAAAGGCTCTAATTTCAGA+GGG | 0.569361 | 6.4:+55813265 | None:intergenic |
| TGTGATTGCTAGGTGGGAGA+TGG | 0.571605 | 6.4:-55814534 | MS.gene81916:intron |
| TTCTCAAGGAATTCTATGGC+GGG | 0.576719 | 6.4:-55813635 | MS.gene81916:intron |
| GGATTTATCGATTTCAACTG+AGG | 0.577148 | 6.4:+55811092 | None:intergenic |
| ACATCACAAGTAACCAAGGT+TGG | 0.578483 | 6.4:-55813845 | MS.gene81916:CDS |
| TGGAGGGTATGGTGTTTGAG+AGG | 0.579851 | 6.4:+55811171 | None:intergenic |
| TTTCTCAAGGAATTCTATGG+CGG | 0.583307 | 6.4:-55813636 | MS.gene81916:intron |
| TCTTGGCTATACAAGGCTAG+TGG | 0.585201 | 6.4:-55813888 | MS.gene81916:CDS |
| AGCTGCAGCCTCAGTTCCAG+GGG | 0.585982 | 6.4:+55814434 | None:intergenic |
| TGAAGGAGTAGCGGAGATTG+GGG | 0.589337 | 6.4:+55811071 | None:intergenic |
| TTGGGAGCGTCCAGAAGACA+TGG | 0.591746 | 6.4:-55814493 | MS.gene81916:CDS |
| GGTTGCGAGGCTCATTCTGA+TGG | 0.591970 | 6.4:-55810949 | MS.gene81916:intron |
| ACCAACCACGCTCTTTACAC+AGG | 0.592498 | 6.4:-55814667 | MS.gene81916:intron |
| CTACAGATTAGAACAACTCC+AGG | 0.598543 | 6.4:-55813540 | MS.gene81916:intron |
| CCAAATCCTAATATTCATGT+GGG | 0.601860 | 6.4:-55812983 | MS.gene81916:CDS |
| CAGGTTGAGATATGATTGAA+GGG | 0.604313 | 6.4:+55813053 | None:intergenic |
| ACCATGTATGACATCTTCAT+GGG | 0.604739 | 6.4:+55813127 | None:intergenic |
| ACGCTCAGGGAAGTTGCCTA+AGG | 0.607352 | 6.4:-55815083 | MS.gene81916:CDS |
| TCCCATGAAGATGTCATACA+TGG | 0.607679 | 6.4:-55813128 | MS.gene81916:CDS |
| GGATGTTCTGCTTCACTGCG+TGG | 0.611052 | 6.4:-55810003 | MS.gene81916:CDS |
| GCAGCATTCATATAGGTGGT+AGG | 0.611057 | 6.4:+55812890 | None:intergenic |
| AAGAACCTTTGAAGGAGTAG+CGG | 0.614741 | 6.4:+55811062 | None:intergenic |
| AGCTCAAACATTACTAACAC+AGG | 0.615406 | 6.4:-55813778 | MS.gene81916:intron |
| TGGTGATGATTTGAGATGGA+GGG | 0.617114 | 6.4:+55811155 | None:intergenic |
| AAAAGCAGCATTCATATAGG+TGG | 0.619409 | 6.4:+55812886 | None:intergenic |
| ACCTCATGATAGAGGTTGCG+AGG | 0.621758 | 6.4:-55810962 | MS.gene81916:CDS |
| ACCTGTGTAAAGAGCGTGGT+TGG | 0.623720 | 6.4:+55814666 | None:intergenic |
| AATTGAAGCAGCAGAAAGAG+CGG | 0.625859 | 6.4:+55814401 | None:intergenic |
| TTAGCCAAGATTAAGACTGA+TGG | 0.628467 | 6.4:-55813603 | MS.gene81916:CDS |
| AGCAGTGTCTGAATTCAGCT+GGG | 0.628902 | 6.4:-55813817 | MS.gene81916:CDS |
| ATGAAGATGTCATACATGGT+GGG | 0.629064 | 6.4:-55813124 | MS.gene81916:CDS |
| GATTCTGATCCTAAGTGGAA+GGG | 0.630398 | 6.4:-55809927 | MS.gene81916:CDS |
| ATCGATGAAGGTCAAAACCA+TGG | 0.631860 | 6.4:+55811025 | None:intergenic |
| GTGATGGTGATGATTTGAGA+TGG | 0.635547 | 6.4:+55811151 | None:intergenic |
| AAAGGCTCTAATTTCAGAGG+GGG | 0.637646 | 6.4:+55813267 | None:intergenic |
| TGCATAGTCATAATTAGCTG+AGG | 0.638379 | 6.4:+55815144 | None:intergenic |
| ATGGTGATGATTTGAGATGG+AGG | 0.646685 | 6.4:+55811154 | None:intergenic |
| TTGGCTATACAAGGCTAGTG+GGG | 0.646701 | 6.4:-55813886 | MS.gene81916:CDS |
| GCCTCGCAACCTCTATCATG+AGG | 0.647110 | 6.4:+55810961 | None:intergenic |
| CATGAAGATGTCATACATGG+TGG | 0.650028 | 6.4:-55813125 | MS.gene81916:CDS |
| GGAGAAAATGAATAGCACCA+TGG | 0.650294 | 6.4:+55813345 | None:intergenic |
| GAGGGATGCTGTGAATGGGA+AGG | 0.654559 | 6.4:+55811230 | None:intergenic |
| TATCTCAACCTGCCAAAGTG+GGG | 0.664840 | 6.4:-55813042 | MS.gene81916:CDS |
| AAGCTCACCGTAAAAGACAT+CGG | 0.669269 | 6.4:+55814804 | None:intergenic |
| CATATTGATGGAATTCAGTG+TGG | 0.674538 | 6.4:-55813304 | MS.gene81916:CDS |
| ATATACCACAACCTCAACCA+TGG | 0.675960 | 6.4:-55813362 | MS.gene81916:CDS |
| GAAGCTGAAACAAACAGTGA+TGG | 0.680351 | 6.4:+55811135 | None:intergenic |
| TCACACCTGTGTAAAGAGCG+TGG | 0.687393 | 6.4:+55814662 | None:intergenic |
| ACGTACATCACAAGTAACCA+AGG | 0.694288 | 6.4:-55813849 | MS.gene81916:CDS |
| CAAAGGCTCTAATTTCAGAG+GGG | 0.704501 | 6.4:+55813266 | None:intergenic |
| CCAAAACAATTACATCACAG+AGG | 0.744075 | 6.4:-55813085 | MS.gene81916:CDS |
| GGTTGGAGGATACTACGACG+CGG | 0.797840 | 6.4:-55814850 | MS.gene81916:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATAAAAATCATATTGA+TGG | - | chr6.4:55811752-55811771 | MS.gene81916:intron | 10.0% |
| !! | TTAAATGTATAAAGAAAATT+GGG | - | chr6.4:55813542-55813561 | MS.gene81916:CDS | 10.0% |
| !! | TTCTTAAAAAAAAATTAAGT+TGG | - | chr6.4:55813051-55813070 | MS.gene81916:CDS | 10.0% |
| !!! | ATGATTTTTATTTAAGATTT+TGG | + | chr6.4:55811747-55811766 | None:intergenic | 10.0% |
| !! | ATAAAAATGAAAATGCTATA+AGG | + | chr6.4:55814162-55814181 | None:intergenic | 15.0% |
| !! | GTTAAATGTATAAAGAAAAT+TGG | - | chr6.4:55813541-55813560 | MS.gene81916:CDS | 15.0% |
| !! | TAAAAATGAAAATGCTATAA+GGG | + | chr6.4:55814161-55814180 | None:intergenic | 15.0% |
| !! | TAAAATGTATACATTATCAT+AGG | + | chr6.4:55810442-55810461 | None:intergenic | 15.0% |
| !! | TTGTAATTTCGAAATATTTA+GGG | - | chr6.4:55814387-55814406 | MS.gene81916:CDS | 15.0% |
| !! | TTTGTAATTTCGAAATATTT+AGG | - | chr6.4:55814386-55814405 | MS.gene81916:CDS | 15.0% |
| !!! | AACTAGTTAAATAATTTGTA+AGG | - | chr6.4:55812378-55812397 | MS.gene81916:intron | 15.0% |
| !!! | AATATATACTCCATATTTTT+TGG | - | chr6.4:55813598-55813617 | MS.gene81916:CDS | 15.0% |
| !!! | AATGTTTTATTTTTTACAAG+AGG | + | chr6.4:55811070-55811089 | None:intergenic | 15.0% |
| !!! | ATAAATTTGTCTTTTTTTGT+TGG | - | chr6.4:55814284-55814303 | MS.gene81916:intron | 15.0% |
| !!! | ATTTTAAATTGTGTATGAAA+AGG | - | chr6.4:55811137-55811156 | MS.gene81916:CDS | 15.0% |
| !!! | TCTTTCGTTAATAAATTTTA+TGG | + | chr6.4:55814349-55814368 | None:intergenic | 15.0% |
| !! | AATCAAAATGACTATTAACT+CGG | + | chr6.4:55814203-55814222 | None:intergenic | 20.0% |
| !! | AATTGAGTAAATACTCAATT+TGG | + | chr6.4:55814997-55815016 | None:intergenic | 20.0% |
| !! | AGACTTTCTTAACATATATA+TGG | + | chr6.4:55812335-55812354 | None:intergenic | 20.0% |
| !! | ATTAATCATTTCTAATCATC+CGG | - | chr6.4:55812801-55812820 | MS.gene81916:intron | 20.0% |
| !! | TCCATTAAAAACATTTAATG+TGG | - | chr6.4:55813567-55813586 | MS.gene81916:CDS | 20.0% |
| !! | TTAATTCCACCAATAATTAA+AGG | + | chr6.4:55814083-55814102 | None:intergenic | 20.0% |
| !! | TTTACTAAAAGAATACAGTT+TGG | + | chr6.4:55811356-55811375 | None:intergenic | 20.0% |
| !! | TTTAGTAAACATTAGTTCAA+AGG | - | chr6.4:55811367-55811386 | MS.gene81916:intron | 20.0% |
| !! | TTTCATAGATCATTCATTTA+TGG | - | chr6.4:55811109-55811128 | MS.gene81916:CDS | 20.0% |
| !!! | ATCATATGTTTTTATTTGAG+CGG | + | chr6.4:55813708-55813727 | None:intergenic | 20.0% |
| !!! | ATTTTTATGTACAATGTAGT+AGG | + | chr6.4:55812736-55812755 | None:intergenic | 20.0% |
| !!! | CAAAATTGTGGTTAAATTTT+AGG | + | chr6.4:55810090-55810109 | None:intergenic | 20.0% |
| !!! | TATTATTTTGTTGTTAACTC+AGG | - | chr6.4:55811647-55811666 | MS.gene81916:intron | 20.0% |
| !!! | TCCACATTAAATGTTTTTAA+TGG | + | chr6.4:55813571-55813590 | None:intergenic | 20.0% |
| !!! | TGAATTTGTATTTTAGTCAA+AGG | + | chr6.4:55813647-55813666 | None:intergenic | 20.0% |
| !!! | TTCATCACATATTTTTCAAA+TGG | + | chr6.4:55812858-55812877 | None:intergenic | 20.0% |
| !!! | TTCTAAAATATCAAACTCAT+TGG | - | chr6.4:55811860-55811879 | MS.gene81916:intron | 20.0% |
| !!! | TTCTTTATACATTTAACTTG+TGG | + | chr6.4:55813538-55813557 | None:intergenic | 20.0% |
| ! | AAAAAATAAGCCAATCCAAA+TGG | - | chr6.4:55814944-55814963 | MS.gene81916:intron | 25.0% |
| ! | AAAAATAAGCCAATCCAAAT+GGG | - | chr6.4:55814945-55814964 | MS.gene81916:intron | 25.0% |
| ! | AAAGAATAAGAGAATGGAAT+TGG | + | chr6.4:55813876-55813895 | None:intergenic | 25.0% |
| ! | AAGAATAAGAGAATGGAATT+GGG | + | chr6.4:55813875-55813894 | None:intergenic | 25.0% |
| ! | AATGATCTGATACGAAAAAT+GGG | + | chr6.4:55813228-55813247 | None:intergenic | 25.0% |
| ! | AGATTACTGTTGTGAAAAAA+TGG | + | chr6.4:55813755-55813774 | None:intergenic | 25.0% |
| ! | AGATTCTCTCATTATATTGT+TGG | + | chr6.4:55812893-55812912 | None:intergenic | 25.0% |
| ! | ATATGAAAGTGAGATTTCTT+CGG | - | chr6.4:55810308-55810327 | MS.gene81916:intron | 25.0% |
| ! | ATGAAAAGGATGAACTATTA+TGG | - | chr6.4:55811151-55811170 | MS.gene81916:CDS | 25.0% |
| ! | ATTAATATACCTCATGATAG+AGG | - | chr6.4:55814098-55814117 | MS.gene81916:intron | 25.0% |
| ! | ATTCTCTCATTATATTGTTG+GGG | + | chr6.4:55812891-55812910 | None:intergenic | 25.0% |
| ! | CAAGATAGTTTATGAGAAAA+CGG | + | chr6.4:55814864-55814883 | None:intergenic | 25.0% |
| ! | CATACATCTACCAAAAAATA+TGG | + | chr6.4:55813611-55813630 | None:intergenic | 25.0% |
| ! | CTCAAAATTATTATCGACAT+CGG | - | chr6.4:55814703-55814722 | MS.gene81916:CDS | 25.0% |
| ! | CTCTTATAAAATGAAATCAC+AGG | - | chr6.4:55812487-55812506 | MS.gene81916:intron | 25.0% |
| ! | CTTTCTTAACATATATATGG+AGG | + | chr6.4:55812332-55812351 | None:intergenic | 25.0% |
| ! | GATAAAATGATAAGAGTCAT+TGG | + | chr6.4:55813383-55813402 | None:intergenic | 25.0% |
| ! | GATTCTCTCATTATATTGTT+GGG | + | chr6.4:55812892-55812911 | None:intergenic | 25.0% |
| ! | TGAAAAGGATGAACTATTAT+GGG | - | chr6.4:55811152-55811171 | MS.gene81916:CDS | 25.0% |
| ! | TTAATCATACATACATAGTC+CGG | + | chr6.4:55812823-55812842 | None:intergenic | 25.0% |
| ! | TTTGGCTATATGGTAATTAA+TGG | + | chr6.4:55811338-55811357 | None:intergenic | 25.0% |
| !! | AAAATACGATAGGTTGAATT+AGG | + | chr6.4:55813160-55813179 | None:intergenic | 25.0% |
| !! | AAATATTAGCTCTTGATCAA+TGG | + | chr6.4:55810816-55810835 | None:intergenic | 25.0% |
| !! | ACTCTTCAATTTTCTTGAAT+TGG | - | chr6.4:55812247-55812266 | MS.gene81916:intron | 25.0% |
| !! | AGACTCAAATCTAAACTTTT+TGG | - | chr6.4:55813106-55813125 | MS.gene81916:CDS | 25.0% |
| !! | ATGATGATGAAATATGAACA+GGG | - | chr6.4:55815043-55815062 | MS.gene81916:intron | 25.0% |
| !! | GACTCAAATCTAAACTTTTT+GGG | - | chr6.4:55813107-55813126 | MS.gene81916:CDS | 25.0% |
| !! | TTGTATTGGTCATTAGAATT+TGG | + | chr6.4:55812127-55812146 | None:intergenic | 25.0% |
| !! | TTTTCTTTCTTCTTTTCTCA+AGG | - | chr6.4:55811419-55811438 | MS.gene81916:intron | 25.0% |
| !!! | ATTTGTCTTTTTTTGTTGGT+TGG | - | chr6.4:55814288-55814307 | MS.gene81916:intron | 25.0% |
| !!! | GTAGTGTTTTGAAGATTATA+CGG | - | chr6.4:55814521-55814540 | MS.gene81916:CDS | 25.0% |
| !!! | TCTAACTTTTTTGAAAGTCT+AGG | + | chr6.4:55813089-55813108 | None:intergenic | 25.0% |
| !!! | TTTATTTTCATAAGCTGTTC+TGG | - | chr6.4:55814914-55814933 | MS.gene81916:intron | 25.0% |
| AAACGCAGATCATAATTGTT+GGG | - | chr6.4:55810557-55810576 | MS.gene81916:intron | 30.0% | |
| AAATATAGAGGTTCTTACTC+GGG | - | chr6.4:55810996-55811015 | MS.gene81916:CDS | 30.0% | |
| AACAAAAGCAGCATTCATAT+AGG | + | chr6.4:55812188-55812207 | None:intergenic | 30.0% | |
| AAGAATACAGTTTGGCTATA+TGG | + | chr6.4:55811348-55811367 | None:intergenic | 30.0% | |
| AATAAGCCAATCCAAACAAA+CGG | + | chr6.4:55814581-55814600 | None:intergenic | 30.0% | |
| ACGTTAAGTTCATACTTCAA+AGG | - | chr6.4:55812402-55812421 | MS.gene81916:intron | 30.0% | |
| ACTTGAATGTGACATTACAT+AGG | - | chr6.4:55811895-55811914 | MS.gene81916:intron | 30.0% | |
| AGAGGAAAAGAATAAGAGAA+TGG | + | chr6.4:55813882-55813901 | None:intergenic | 30.0% | |
| ATATGTTTACTCGTGGAAAA+GGG | - | chr6.4:55812536-55812555 | MS.gene81916:intron | 30.0% | |
| ATGTGTATTGTATGTGTCAT+TGG | - | chr6.4:55810184-55810203 | MS.gene81916:intron | 30.0% | |
| ATTGTCAAAAGTTCAACTTC+AGG | + | chr6.4:55812774-55812793 | None:intergenic | 30.0% | |
| CAAAATCTGTAAGCAATTCA+AGG | - | chr6.4:55810739-55810758 | MS.gene81916:intron | 30.0% | |
| CAAATATAGAGGTTCTTACT+CGG | - | chr6.4:55810995-55811014 | MS.gene81916:CDS | 30.0% | |
| CAATGATCTGATACGAAAAA+TGG | + | chr6.4:55813229-55813248 | None:intergenic | 30.0% | |
| CACAGGTATATATACTAATC+TGG | - | chr6.4:55811831-55811850 | MS.gene81916:CDS | 30.0% | |
| CATGAATCATGATGATCAAT+TGG | - | chr6.4:55810781-55810800 | MS.gene81916:intron | 30.0% | |
| CATTGTAAGTTTGTGATTAG+GGG | - | chr6.4:55814555-55814574 | MS.gene81916:intron | 30.0% | |
| CCAAATCCTAATATTCATGT+GGG | - | chr6.4:55812085-55812104 | MS.gene81916:intron | 30.0% | |
| CCAATAATTAAAGGATAACC+AGG | + | chr6.4:55814074-55814093 | None:intergenic | 30.0% | |
| CCATTGTAAGTTTGTGATTA+GGG | - | chr6.4:55814554-55814573 | MS.gene81916:intron | 30.0% | |
| CCTGGTTATCCTTTAATTAT+TGG | - | chr6.4:55814071-55814090 | MS.gene81916:CDS | 30.0% | |
| CGAAATTACAAAAACAGCAT+AGG | + | chr6.4:55814378-55814397 | None:intergenic | 30.0% | |
| GGCTTATTTACTATGAAACA+CGG | - | chr6.4:55814593-55814612 | MS.gene81916:intron | 30.0% | |
| GGTTATCCTTTAATTATTGG+TGG | - | chr6.4:55814074-55814093 | MS.gene81916:CDS | 30.0% | |
| TAGATGAAGAGAAATAGTTC+TGG | + | chr6.4:55812063-55812082 | None:intergenic | 30.0% | |
| TATCACTCTAACAATTCTAG+TGG | + | chr6.4:55812668-55812687 | None:intergenic | 30.0% | |
| TCAAGAAAATTGAAGAGTCT+CGG | + | chr6.4:55812245-55812264 | None:intergenic | 30.0% | |
| TCAATCTTGTAAGTTGTTCT+TGG | + | chr6.4:55810606-55810625 | None:intergenic | 30.0% | |
| TCAATTTGGTATAGAGTTGT+TGG | + | chr6.4:55814983-55815002 | None:intergenic | 30.0% | |
| TCCAAATCCTAATATTCATG+TGG | - | chr6.4:55812084-55812103 | MS.gene81916:intron | 30.0% | |
| TCCATTGTAAGTTTGTGATT+AGG | - | chr6.4:55814553-55814572 | MS.gene81916:intron | 30.0% | |
| TTCAATCAACGTACATATGA+TGG | - | chr6.4:55811607-55811626 | MS.gene81916:intron | 30.0% | |
| TTCTCTCATTATATTGTTGG+GGG | + | chr6.4:55812890-55812909 | None:intergenic | 30.0% | |
| TTGTCCTTCAAAAAACATGA+TGG | + | chr6.4:55809966-55809985 | None:intergenic | 30.0% | |
| ! | AAGTTGAACTTTTGACAATG+TGG | - | chr6.4:55812775-55812794 | MS.gene81916:intron | 30.0% |
| ! | ATATACCTGTGATTTTGCAA+AGG | + | chr6.4:55811822-55811841 | None:intergenic | 30.0% |
| ! | CATGATGATGAAATATGAAC+AGG | - | chr6.4:55815042-55815061 | MS.gene81916:intron | 30.0% |
| ! | GATTTTGCTGACAAATATAG+AGG | - | chr6.4:55810984-55811003 | MS.gene81916:CDS | 30.0% |
| ! | TCTTTTCTCAAGGAATTCTA+TGG | - | chr6.4:55811429-55811448 | MS.gene81916:intron | 30.0% |
| ! | TGATGATGAAATATGAACAG+GGG | - | chr6.4:55815044-55815063 | MS.gene81916:intron | 30.0% |
| ! | TTAACAGAATTAAGCATTGC+AGG | + | chr6.4:55813264-55813283 | None:intergenic | 30.0% |
| ! | TTTAACCACAATTTTGCACT+AGG | - | chr6.4:55810094-55810113 | MS.gene81916:intron | 30.0% |
| !! | AATTGCTTACAGATTTTGAC+TGG | + | chr6.4:55810737-55810756 | None:intergenic | 30.0% |
| !! | ATAAGTTAGTTGATAGTGGA+TGG | - | chr6.4:55814447-55814466 | MS.gene81916:CDS | 30.0% |
| !!! | AAAGCCATCATGTTTTTTGA+AGG | - | chr6.4:55809959-55809978 | MS.gene81916:CDS | 30.0% |
| !!! | ATTTTGTTGTTAACTCAGGT+GGG | - | chr6.4:55811651-55811670 | MS.gene81916:intron | 30.0% |
| !!! | TATATGAATGCTGCTTTTGT+TGG | - | chr6.4:55812187-55812206 | MS.gene81916:intron | 30.0% |
| !!! | TATTTTGTTGTTAACTCAGG+TGG | - | chr6.4:55811650-55811669 | MS.gene81916:intron | 30.0% |
| AAAAGCAGCATTCATATAGG+TGG | + | chr6.4:55812185-55812204 | None:intergenic | 35.0% | |
| AATTGGGTGAGAAGATTTGA+GGG | + | chr6.4:55813859-55813878 | None:intergenic | 35.0% | |
| ACCATGTATGACATCTTCAT+GGG | + | chr6.4:55811944-55811963 | None:intergenic | 35.0% | |
| AGCTCAAACATTACTAACAC+AGG | - | chr6.4:55811290-55811309 | MS.gene81916:intron | 35.0% | |
| AGCTGGGATAACAAATTTGT+TGG | - | chr6.4:55811267-55811286 | MS.gene81916:intron | 35.0% | |
| ATAAGGGCAGAAAATACGAT+AGG | + | chr6.4:55813170-55813189 | None:intergenic | 35.0% | |
| ATAGCACCCACATGAATATT+AGG | + | chr6.4:55812094-55812113 | None:intergenic | 35.0% | |
| ATGAAGATGTCATACATGGT+GGG | - | chr6.4:55811944-55811963 | MS.gene81916:intron | 35.0% | |
| ATGAAGCACAAACATAGACA+CGG | + | chr6.4:55814744-55814763 | None:intergenic | 35.0% | |
| ATGTACAATGTAGTAGGCAA+TGG | + | chr6.4:55812730-55812749 | None:intergenic | 35.0% | |
| ATTATATTGTTGGGGGGTTT+GGG | + | chr6.4:55812883-55812902 | None:intergenic | 35.0% | |
| CAAATATCGTTGTGATTGCT+AGG | - | chr6.4:55810524-55810543 | MS.gene81916:intron | 35.0% | |
| CAAGACCAAACTCACAATAA+GGG | + | chr6.4:55813186-55813205 | None:intergenic | 35.0% | |
| CAGATCTTGCATCATTGTAT+TGG | + | chr6.4:55812141-55812160 | None:intergenic | 35.0% | |
| CATATGTTTACTCGTGGAAA+AGG | - | chr6.4:55812535-55812554 | MS.gene81916:intron | 35.0% | |
| CATATTGATGGAATTCAGTG+TGG | - | chr6.4:55811764-55811783 | MS.gene81916:intron | 35.0% | |
| CCAAAACAATTACATCACAG+AGG | - | chr6.4:55811983-55812002 | MS.gene81916:intron | 35.0% | |
| CCCACATGAATATTAGGATT+TGG | + | chr6.4:55812088-55812107 | None:intergenic | 35.0% | |
| CCCTAATCACAAACTTACAA+TGG | + | chr6.4:55814557-55814576 | None:intergenic | 35.0% | |
| GAAACGCAGATCATAATTGT+TGG | - | chr6.4:55810556-55810575 | MS.gene81916:intron | 35.0% | |
| GCAATCATTACATATGTACC+TGG | + | chr6.4:55811549-55811568 | None:intergenic | 35.0% | |
| GGAAAAATCTGTCCTATATC+AGG | + | chr6.4:55815120-55815139 | None:intergenic | 35.0% | |
| TCTCTCATTATATTGTTGGG+GGG | + | chr6.4:55812889-55812908 | None:intergenic | 35.0% | |
| TGAATGTGACATTACATAGG+TGG | - | chr6.4:55811898-55811917 | MS.gene81916:intron | 35.0% | |
| TGCATAGTCATAATTAGCTG+AGG | + | chr6.4:55809927-55809946 | None:intergenic | 35.0% | |
| TGTACAATGTAGTAGGCAAT+GGG | + | chr6.4:55812729-55812748 | None:intergenic | 35.0% | |
| TGTTAGAGAAGATGAAGACA+TGG | + | chr6.4:55813805-55813824 | None:intergenic | 35.0% | |
| TTAGCCAAGATTAAGACTGA+TGG | - | chr6.4:55811465-55811484 | MS.gene81916:intron | 35.0% | |
| TTCACCATCAGTCTTAATCT+TGG | + | chr6.4:55811472-55811491 | None:intergenic | 35.0% | |
| TTGAGATATGATTGAAGGGA+TGG | + | chr6.4:55812014-55812033 | None:intergenic | 35.0% | |
| TTTCTCAAGGAATTCTATGG+CGG | - | chr6.4:55811432-55811451 | MS.gene81916:intron | 35.0% | |
| ! | CAGGTTGAGATATGATTGAA+GGG | + | chr6.4:55812018-55812037 | None:intergenic | 35.0% |
| ! | CCTCTGTGATGTAATTGTTT+TGG | + | chr6.4:55811986-55812005 | None:intergenic | 35.0% |
| ! | CTTCAAAGGTTCTTCCTTTT+CGG | - | chr6.4:55814015-55814034 | MS.gene81916:intron | 35.0% |
| ! | GTGATAATGTGAAGTTTGGT+TGG | - | chr6.4:55810241-55810260 | MS.gene81916:intron | 35.0% |
| ! | TTCAAAGGTTCTTCCTTTTC+GGG | - | chr6.4:55814016-55814035 | MS.gene81916:intron | 35.0% |
| ! | TTGGTTGGTTGTTGAAGTTA+AGG | + | chr6.4:55813778-55813797 | None:intergenic | 35.0% |
| ! | TTTATATGTGCATTGATGCC+AGG | - | chr6.4:55811495-55811514 | MS.gene81916:intron | 35.0% |
| !! | ACATAGGTGGACTACATATT+AGG | - | chr6.4:55811911-55811930 | MS.gene81916:intron | 35.0% |
| !! | GGATTTATCGATTTCAACTG+AGG | + | chr6.4:55813979-55813998 | None:intergenic | 35.0% |
| !! | GTGGATAAGTTAGTTGATAG+TGG | - | chr6.4:55814443-55814462 | MS.gene81916:CDS | 35.0% |
| !!! | TTTTGACTGGCTTAATAGCT+TGG | + | chr6.4:55810724-55810743 | None:intergenic | 35.0% |
| AAGATGAAGACATGGTTGGT+TGG | + | chr6.4:55813797-55813816 | None:intergenic | 40.0% | |
| AAGCTCACCGTAAAAGACAT+CGG | + | chr6.4:55810267-55810286 | None:intergenic | 40.0% | |
| AATGAATAGCACCATGGTTG+AGG | + | chr6.4:55811720-55811739 | None:intergenic | 40.0% | |
| AATTGAAGCAGCAGAAAGAG+CGG | + | chr6.4:55810670-55810689 | None:intergenic | 40.0% | |
| AATTTCAGAGGGGGAGAAAT+GGG | + | chr6.4:55811795-55811814 | None:intergenic | 40.0% | |
| ACATCACAAGTAACCAAGGT+TGG | - | chr6.4:55811223-55811242 | MS.gene81916:CDS | 40.0% | |
| ACGTACATCACAAGTAACCA+AGG | - | chr6.4:55811219-55811238 | MS.gene81916:CDS | 40.0% | |
| AGAGAAGATGAAGACATGGT+TGG | + | chr6.4:55813801-55813820 | None:intergenic | 40.0% | |
| AGAGTTGTTGGCAAGATCTT+GGG | + | chr6.4:55814971-55814990 | None:intergenic | 40.0% | |
| ATATACCACAACCTCAACCA+TGG | - | chr6.4:55811706-55811725 | MS.gene81916:intron | 40.0% | |
| ATATCGTTGTGATTGCTAGG+TGG | - | chr6.4:55810527-55810546 | MS.gene81916:intron | 40.0% | |
| ATATCTCAACCTGCCAAAGT+GGG | - | chr6.4:55812025-55812044 | MS.gene81916:intron | 40.0% | |
| ATCGATGAAGGTCAAAACCA+TGG | + | chr6.4:55814046-55814065 | None:intergenic | 40.0% | |
| ATTTGAGGGATGCTGTGAAT+GGG | + | chr6.4:55813845-55813864 | None:intergenic | 40.0% | |
| CACCATGTATGACATCTTCA+TGG | + | chr6.4:55811945-55811964 | None:intergenic | 40.0% | |
| CAGAGTACGAGCAGTAAAAT+GGG | + | chr6.4:55811028-55811047 | None:intergenic | 40.0% | |
| CATGAAGATGTCATACATGG+TGG | - | chr6.4:55811943-55811962 | MS.gene81916:intron | 40.0% | |
| CATTATATTGTTGGGGGGTT+TGG | + | chr6.4:55812884-55812903 | None:intergenic | 40.0% | |
| CCAAGACCAAACTCACAATA+AGG | + | chr6.4:55813187-55813206 | None:intergenic | 40.0% | |
| CCTTATTGTGAGTTTGGTCT+TGG | - | chr6.4:55813184-55813203 | MS.gene81916:intron | 40.0% | |
| CGAAAAGGAAGAACCTTTGA+AGG | + | chr6.4:55814017-55814036 | None:intergenic | 40.0% | |
| CTAATCAGTTTCCTTAGCCT+TGG | + | chr6.4:55812278-55812297 | None:intergenic | 40.0% | |
| CTACAGATTAGAACAACTCC+AGG | - | chr6.4:55811528-55811547 | MS.gene81916:intron | 40.0% | |
| CTCTGTTTGGTAGAAAGTAG+TGG | - | chr6.4:55814417-55814436 | MS.gene81916:CDS | 40.0% | |
| GAAGCTGAAACAAACAGTGA+TGG | + | chr6.4:55813936-55813955 | None:intergenic | 40.0% | |
| GAATTGGGTGAGAAGATTTG+AGG | + | chr6.4:55813860-55813879 | None:intergenic | 40.0% | |
| GATTCTGATCCTAAGTGGAA+GGG | - | chr6.4:55815141-55815160 | MS.gene81916:CDS | 40.0% | |
| GCGTTGCATGTATATGATCT+TGG | - | chr6.4:55812696-55812715 | MS.gene81916:intron | 40.0% | |
| GGAGAAAATGAATAGCACCA+TGG | + | chr6.4:55811726-55811745 | None:intergenic | 40.0% | |
| GTAATCATATGTGCCAGTGT+AGG | + | chr6.4:55814665-55814684 | None:intergenic | 40.0% | |
| TAATTTCAGAGGGGGAGAAA+TGG | + | chr6.4:55811796-55811815 | None:intergenic | 40.0% | |
| TAGAGCCTTTGCAAAATCAC+AGG | - | chr6.4:55811814-55811833 | MS.gene81916:CDS | 40.0% | |
| TAGAGTTGTTGGCAAGATCT+TGG | + | chr6.4:55814972-55814991 | None:intergenic | 40.0% | |
| TATCGTTGTGATTGCTAGGT+GGG | - | chr6.4:55810528-55810547 | MS.gene81916:intron | 40.0% | |
| TCACTGTTTGTTTCAGCTTC+AGG | - | chr6.4:55813936-55813955 | MS.gene81916:intron | 40.0% | |
| TCCACAAATTAGGTGTGTTC+CGG | - | chr6.4:55814620-55814639 | MS.gene81916:intron | 40.0% | |
| TCCCATGAAGATGTCATACA+TGG | - | chr6.4:55811940-55811959 | MS.gene81916:intron | 40.0% | |
| TGAGCTCATATGTTTACTCG+TGG | - | chr6.4:55812529-55812548 | MS.gene81916:intron | 40.0% | |
| TGATTCTGATCCTAAGTGGA+AGG | - | chr6.4:55815140-55815159 | MS.gene81916:CDS | 40.0% | |
| TTAGGGACTATGACTCTGTT+TGG | - | chr6.4:55814404-55814423 | MS.gene81916:CDS | 40.0% | |
| TTATTTGAGCGGCACAGAAT+TGG | + | chr6.4:55813697-55813716 | None:intergenic | 40.0% | |
| TTCCACTTAGGATCAGAATC+AGG | + | chr6.4:55815141-55815160 | None:intergenic | 40.0% | |
| TTCCTGATTCTGATCCTAAG+TGG | - | chr6.4:55815136-55815155 | MS.gene81916:CDS | 40.0% | |
| TTCTCAAGGAATTCTATGGC+GGG | - | chr6.4:55811433-55811452 | MS.gene81916:intron | 40.0% | |
| TTCTGCCCTTATTGTGAGTT+TGG | - | chr6.4:55813178-55813197 | MS.gene81916:intron | 40.0% | |
| TTCTTGAATTGGTCATGCCA+AGG | - | chr6.4:55812258-55812277 | MS.gene81916:intron | 40.0% | |
| TTGAGCCTAGTGCAAAATTG+TGG | + | chr6.4:55810102-55810121 | None:intergenic | 40.0% | |
| ! | AAAGGCTCTAATTTCAGAGG+GGG | + | chr6.4:55811804-55811823 | None:intergenic | 40.0% |
| ! | AACTATTATGGGCTGCTTCT+TGG | - | chr6.4:55811163-55811182 | MS.gene81916:CDS | 40.0% |
| ! | AAGAACCTTTGAAGGAGTAG+CGG | + | chr6.4:55814009-55814028 | None:intergenic | 40.0% |
| ! | ATGATTTGAGATGGAGGGTA+TGG | + | chr6.4:55813911-55813930 | None:intergenic | 40.0% |
| ! | ATGGTGATGATTTGAGATGG+AGG | + | chr6.4:55813917-55813936 | None:intergenic | 40.0% |
| ! | ATGTCATACATGGTGGGATA+TGG | - | chr6.4:55811950-55811969 | MS.gene81916:intron | 40.0% |
| ! | CAAAGGCTCTAATTTCAGAG+GGG | + | chr6.4:55811805-55811824 | None:intergenic | 40.0% |
| ! | GCAAAGGCTCTAATTTCAGA+GGG | + | chr6.4:55811806-55811825 | None:intergenic | 40.0% |
| ! | GCAGGTTGAGATATGATTGA+AGG | + | chr6.4:55812019-55812038 | None:intergenic | 40.0% |
| ! | GCTTTAGGTCTTCCTGATAT+AGG | - | chr6.4:55815105-55815124 | MS.gene81916:CDS | 40.0% |
| ! | GTATTGTATGTGTCATTGGC+AGG | - | chr6.4:55810188-55810207 | MS.gene81916:intron | 40.0% |
| ! | GTGATGGTGATGATTTGAGA+TGG | + | chr6.4:55813920-55813939 | None:intergenic | 40.0% |
| ! | TGCAAAGGCTCTAATTTCAG+AGG | + | chr6.4:55811807-55811826 | None:intergenic | 40.0% |
| ! | TGGTGATGATTTGAGATGGA+GGG | + | chr6.4:55813916-55813935 | None:intergenic | 40.0% |
| ! | TGTCATACATGGTGGGATAT+GGG | - | chr6.4:55811951-55811970 | MS.gene81916:intron | 40.0% |
| !! | AAGATTGATTCGAATTCCCC+TGG | - | chr6.4:55810618-55810637 | MS.gene81916:intron | 40.0% |
| !! | ATTCATGTGGGTGCTATTGT+TGG | - | chr6.4:55812097-55812116 | MS.gene81916:intron | 40.0% |
| !! | ATTGTGAGTTTGGTCTTGGA+TGG | - | chr6.4:55813188-55813207 | MS.gene81916:intron | 40.0% |
| !! | CGTGGTTGATGCAATTTTAG+GGG | - | chr6.4:55815083-55815102 | MS.gene81916:CDS | 40.0% |
| !! | GATGCAATTTTAGGGGCTTT+AGG | - | chr6.4:55815090-55815109 | MS.gene81916:CDS | 40.0% |
| !! | GCGTGGTTGATGCAATTTTA+GGG | - | chr6.4:55815082-55815101 | MS.gene81916:CDS | 40.0% |
| !! | TGCGTGGTTGATGCAATTTT+AGG | - | chr6.4:55815081-55815100 | MS.gene81916:CDS | 40.0% |
| !! | TGGTAGAAAGTAGTGGATAG+TGG | - | chr6.4:55814424-55814443 | MS.gene81916:CDS | 40.0% |
| !! | TTTGGTCTTGGATGGATGTA+GGG | - | chr6.4:55813196-55813215 | MS.gene81916:intron | 40.0% |
| !! | TTTTTGAAGGACAACGCTCA+GGG | - | chr6.4:55809972-55809991 | MS.gene81916:CDS | 40.0% |
| !!! | TGGTTTTGACCTTCATCGAT+TGG | - | chr6.4:55814046-55814065 | MS.gene81916:CDS | 40.0% |
| !!! | TTTTTTGAAGGACAACGCTC+AGG | - | chr6.4:55809971-55809990 | MS.gene81916:CDS | 40.0% |
| AACCAGGTTCCAATCGATGA+AGG | + | chr6.4:55814058-55814077 | None:intergenic | 45.0% | |
| AAGCAGTGTCTGAATTCAGC+TGG | - | chr6.4:55811250-55811269 | MS.gene81916:intron | 45.0% | |
| AATCTCCGCTACTCCTTCAA+AGG | - | chr6.4:55814001-55814020 | MS.gene81916:intron | 45.0% | |
| AATTAGGTGTGTTCCGGTGT+CGG | - | chr6.4:55814626-55814645 | MS.gene81916:intron | 45.0% | |
| AATTGGTCATGCCAAGGCTA+AGG | - | chr6.4:55812264-55812283 | MS.gene81916:intron | 45.0% | |
| ACAAACATAGACACGGACAC+GGG | + | chr6.4:55814737-55814756 | None:intergenic | 45.0% | |
| ACACGGACACTCCACAAATT+AGG | - | chr6.4:55814610-55814629 | MS.gene81916:intron | 45.0% | |
| ACCGGAACACACCTAATTTG+TGG | + | chr6.4:55814624-55814643 | None:intergenic | 45.0% | |
| AGCAGTGTCTGAATTCAGCT+GGG | - | chr6.4:55811251-55811270 | MS.gene81916:intron | 45.0% | |
| ATCTGTAGAGAGCTACTTCC+TGG | + | chr6.4:55811516-55811535 | None:intergenic | 45.0% | |
| CACAAACATAGACACGGACA+CGG | + | chr6.4:55814738-55814757 | None:intergenic | 45.0% | |
| CACTGCGAAGATAATCAAGC+TGG | + | chr6.4:55810338-55810357 | None:intergenic | 45.0% | |
| CACTTCACTCTTTGGTCCTT+AGG | + | chr6.4:55810004-55810023 | None:intergenic | 45.0% | |
| CATATCTCAACCTGCCAAAG+TGG | - | chr6.4:55812024-55812043 | MS.gene81916:intron | 45.0% | |
| CCAGAGTACGAGCAGTAAAA+TGG | + | chr6.4:55811029-55811048 | None:intergenic | 45.0% | |
| CTAAGGACCAAAGAGTGAAG+TGG | - | chr6.4:55810002-55810021 | MS.gene81916:CDS | 45.0% | |
| CTTGGCTATACAAGGCTAGT+GGG | - | chr6.4:55811181-55811200 | MS.gene81916:CDS | 45.0% | |
| GAATCACAACCCTTCCACTT+AGG | + | chr6.4:55815153-55815172 | None:intergenic | 45.0% | |
| GATTTGAGGGATGCTGTGAA+TGG | + | chr6.4:55813846-55813865 | None:intergenic | 45.0% | |
| GCAGATAAGCTAGCTGATAG+TGG | - | chr6.4:55814477-55814496 | MS.gene81916:CDS | 45.0% | |
| GCAGCATTCATATAGGTGGT+AGG | + | chr6.4:55812181-55812200 | None:intergenic | 45.0% | |
| GTGGAAGGGTTGTGATTCTT+CGG | - | chr6.4:55815155-55815174 | MS.gene81916:CDS | 45.0% | |
| TACTCGTGGAAAAGGGAATC+TGG | - | chr6.4:55812543-55812562 | MS.gene81916:intron | 45.0% | |
| TATCTCAACCTGCCAAAGTG+GGG | - | chr6.4:55812026-55812045 | MS.gene81916:intron | 45.0% | |
| TCGATTTCAACTGAGGCTGT+GGG | + | chr6.4:55813972-55813991 | None:intergenic | 45.0% | |
| TCTTGGCTATACAAGGCTAG+TGG | - | chr6.4:55811180-55811199 | MS.gene81916:CDS | 45.0% | |
| TTGGCTATACAAGGCTAGTG+GGG | - | chr6.4:55811182-55811201 | MS.gene81916:CDS | 45.0% | |
| ! | ATCGATTTCAACTGAGGCTG+TGG | + | chr6.4:55813973-55813992 | None:intergenic | 45.0% |
| ! | ATCTTCGCAGTGCTATTCGT+TGG | - | chr6.4:55810346-55810365 | MS.gene81916:intron | 45.0% |
| ! | CCATTTTACTGCTCGTACTC+TGG | - | chr6.4:55811026-55811045 | MS.gene81916:CDS | 45.0% |
| ! | CTTGGTGTATCCATGTCTTC+TGG | + | chr6.4:55810588-55810607 | None:intergenic | 45.0% |
| ! | GCGGGTGATAATGTGAAGTT+TGG | - | chr6.4:55810237-55810256 | MS.gene81916:intron | 45.0% |
| ! | TCTTCGCAGTGCTATTCGTT+GGG | - | chr6.4:55810347-55810366 | MS.gene81916:intron | 45.0% |
| ! | TGAAGACATGGTTGGTTGGT+TGG | + | chr6.4:55813793-55813812 | None:intergenic | 45.0% |
| ! | TTGAAGGAGTAGCGGAGATT+GGG | + | chr6.4:55814001-55814020 | None:intergenic | 45.0% |
| ! | TTGTATGTGTCATTGGCAGG+TGG | - | chr6.4:55810191-55810210 | MS.gene81916:intron | 45.0% |
| ! | TTTGAAGGAGTAGCGGAGAT+TGG | + | chr6.4:55814002-55814021 | None:intergenic | 45.0% |
| !! | GTTTGGTCTTGGATGGATGT+AGG | - | chr6.4:55813195-55813214 | MS.gene81916:intron | 45.0% |
| !! | TGGTTGGCCGATGTCTTTTA+CGG | - | chr6.4:55810257-55810276 | MS.gene81916:intron | 45.0% |
| !! | TTACGGTGAGCTTGTTGAGT+TGG | - | chr6.4:55810274-55810293 | MS.gene81916:intron | 45.0% |
| !!! | AAGGTTCTTCCTTTTCGGGT+TGG | - | chr6.4:55814020-55814039 | MS.gene81916:intron | 45.0% |
| !! | TTAATTATATAAAATCAAAA+TGG | + | chr6.4:55810839-55810858 | None:intergenic | 5.0% |
| !!! | ATTTTATATAATTAAACTTA+AGG | - | chr6.4:55810844-55810863 | MS.gene81916:intron | 5.0% |
| !!! | TTATATTTTTTTTTTTTGAA+TGG | + | chr6.4:55810870-55810889 | None:intergenic | 5.0% |
| AAACCATGGCCAACCCGAAA+AGG | + | chr6.4:55814032-55814051 | None:intergenic | 50.0% | |
| ACACTGCTTGACTCCAACCT+TGG | + | chr6.4:55811239-55811258 | None:intergenic | 50.0% | |
| ACCAACCACGCTCTTTACAC+AGG | - | chr6.4:55810401-55810420 | MS.gene81916:intron | 50.0% | |
| ACCTCATGATAGAGGTTGCG+AGG | - | chr6.4:55814106-55814125 | MS.gene81916:intron | 50.0% | |
| AGGACCAAAGAGTGAAGTGG+AGG | - | chr6.4:55810005-55810024 | MS.gene81916:CDS | 50.0% | |
| CTGCTCGTACTCTGGTTATC+AGG | - | chr6.4:55811034-55811053 | MS.gene81916:CDS | 50.0% | |
| GACCAAAGAGTGAAGTGGAG+GGG | - | chr6.4:55810007-55810026 | MS.gene81916:CDS | 50.0% | |
| GATCTTGGGCCCATTTGGAT+TGG | + | chr6.4:55814957-55814976 | None:intergenic | 50.0% | |
| GGACCAAAGAGTGAAGTGGA+GGG | - | chr6.4:55810006-55810025 | MS.gene81916:CDS | 50.0% | |
| GGCTGCTTCTTGGCTATACA+AGG | - | chr6.4:55811173-55811192 | MS.gene81916:CDS | 50.0% | |
| GGTTCTGTTGCAGCTTTGCT+TGG | - | chr6.4:55812208-55812227 | MS.gene81916:intron | 50.0% | |
| GTGATTAGGGGCCGTTTGTT+TGG | - | chr6.4:55814567-55814586 | MS.gene81916:intron | 50.0% | |
| TAGCACCATGGTTGAGGTTG+TGG | + | chr6.4:55811714-55811733 | None:intergenic | 50.0% | |
| TAGGGGCCGTTTGTTTGGAT+TGG | - | chr6.4:55814572-55814591 | MS.gene81916:intron | 50.0% | |
| TCACACCTGTGTAAAGAGCG+TGG | + | chr6.4:55810409-55810428 | None:intergenic | 50.0% | |
| TCTTGGATGGATGTAGGGCT+AGG | - | chr6.4:55813201-55813220 | MS.gene81916:intron | 50.0% | |
| TGTGATTGCTAGGTGGGAGA+TGG | - | chr6.4:55810534-55810553 | MS.gene81916:intron | 50.0% | |
| TTCGAATTCCCCTGGAACTG+AGG | - | chr6.4:55810626-55810645 | MS.gene81916:intron | 50.0% | |
| ! | ACCTGTGTAAAGAGCGTGGT+TGG | + | chr6.4:55810405-55810424 | None:intergenic | 50.0% |
| ! | CATTGGCAGGTGGATTTGGT+TGG | - | chr6.4:55810201-55810220 | MS.gene81916:intron | 50.0% |
| ! | CTTCGCAGTGCTATTCGTTG+GGG | - | chr6.4:55810348-55810367 | MS.gene81916:intron | 50.0% |
| ! | GACCTTCATCGATTGGAACC+TGG | - | chr6.4:55814053-55814072 | MS.gene81916:CDS | 50.0% |
| ! | GGAATTCTATGGCGGGAAGA+AGG | - | chr6.4:55811440-55811459 | MS.gene81916:intron | 50.0% |
| ! | GTGTCATTGGCAGGTGGATT+TGG | - | chr6.4:55810197-55810216 | MS.gene81916:intron | 50.0% |
| ! | TGAAGGAGTAGCGGAGATTG+GGG | + | chr6.4:55814000-55814019 | None:intergenic | 50.0% |
| ! | TGGAGGGTATGGTGTTTGAG+AGG | + | chr6.4:55813900-55813919 | None:intergenic | 50.0% |
| !! | CATGTGGGTGCTATTGTTGG+AGG | - | chr6.4:55812100-55812119 | MS.gene81916:intron | 50.0% |
| ACACGCTTCGCTTCCTACAC+TGG | - | chr6.4:55814649-55814668 | MS.gene81916:intron | 55.0% | |
| ACGCTCAGGGAAGTTGCCTA+AGG | - | chr6.4:55809985-55810004 | MS.gene81916:CDS | 55.0% | |
| AGTGAAGTGGAGGGGAGACT+CGG | - | chr6.4:55810015-55810034 | MS.gene81916:intron | 55.0% | |
| CTCCCCTCCACTTCACTCTT+TGG | + | chr6.4:55810012-55810031 | None:intergenic | 55.0% | |
| GAGGGATGCTGTGAATGGGA+AGG | + | chr6.4:55813841-55813860 | None:intergenic | 55.0% | |
| GCCAAAGTGGGGTGCAATGA+TGG | - | chr6.4:55812037-55812056 | MS.gene81916:intron | 55.0% | |
| GCCATCATTGCACCCCACTT+TGG | + | chr6.4:55812041-55812060 | None:intergenic | 55.0% | |
| GCCTCGCAACCTCTATCATG+AGG | + | chr6.4:55814110-55814129 | None:intergenic | 55.0% | |
| GGATGTTCTGCTTCACTGCG+TGG | - | chr6.4:55815065-55815084 | MS.gene81916:intron | 55.0% | |
| GGCAAGATCTTGGGCCCATT+TGG | + | chr6.4:55814962-55814981 | None:intergenic | 55.0% | |
| GGTTGCGAGGCTCATTCTGA+TGG | - | chr6.4:55814119-55814138 | MS.gene81916:intron | 55.0% | |
| GGTTGGAGGATACTACGACG+CGG | - | chr6.4:55810218-55810237 | MS.gene81916:intron | 55.0% | |
| GTTGGAGGATACTACGACGC+GGG | - | chr6.4:55810219-55810238 | MS.gene81916:intron | 55.0% | |
| TCATTGCACCCCACTTTGGC+AGG | + | chr6.4:55812037-55812056 | None:intergenic | 55.0% | |
| ! | TGGCAGGTGGATTTGGTTGG+AGG | - | chr6.4:55810204-55810223 | MS.gene81916:intron | 55.0% |
| !! | TTGGGAGCGTCCAGAAGACA+TGG | - | chr6.4:55810575-55810594 | MS.gene81916:intron | 55.0% |
| !!! | CTTCCTTTTCGGGTTGGCCA+TGG | - | chr6.4:55814026-55814045 | MS.gene81916:intron | 55.0% |
| AAGCGAAGCGTGTCCGACAC+CGG | + | chr6.4:55814642-55814661 | None:intergenic | 60.0% | |
| AGCTGCAGCCTCAGTTCCAG+GGG | + | chr6.4:55810637-55810656 | None:intergenic | 60.0% | |
| CAGCTGCAGCCTCAGTTCCA+GGG | + | chr6.4:55810638-55810657 | None:intergenic | 60.0% | |
| GGAGACTCGGCTCTCTCTGA+TGG | - | chr6.4:55810028-55810047 | MS.gene81916:intron | 60.0% | |
| TCAGCTGCAGCCTCAGTTCC+AGG | + | chr6.4:55810639-55810658 | None:intergenic | 60.0% | |
| TGGAACTGAGGCTGCAGCTG+AGG | - | chr6.4:55810638-55810657 | MS.gene81916:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 55809896 | 55815194 | 55809896 | ID=MS.gene81916 |
| chr6.4 | mRNA | 55809896 | 55815194 | 55809896 | ID=MS.gene81916.t1;Parent=MS.gene81916 |
| chr6.4 | exon | 55815075 | 55815194 | 55815075 | ID=MS.gene81916.t1.exon1;Parent=MS.gene81916.t1 |
| chr6.4 | CDS | 55815075 | 55815194 | 55815075 | ID=cds.MS.gene81916.t1;Parent=MS.gene81916.t1 |
| chr6.4 | exon | 55814668 | 55814880 | 55814668 | ID=MS.gene81916.t1.exon2;Parent=MS.gene81916.t1 |
| chr6.4 | CDS | 55814668 | 55814880 | 55814668 | ID=cds.MS.gene81916.t1;Parent=MS.gene81916.t1 |
| chr6.4 | exon | 55814344 | 55814544 | 55814344 | ID=MS.gene81916.t1.exon3;Parent=MS.gene81916.t1 |
| chr6.4 | CDS | 55814344 | 55814544 | 55814344 | ID=cds.MS.gene81916.t1;Parent=MS.gene81916.t1 |
| chr6.4 | exon | 55814035 | 55814112 | 55814035 | ID=MS.gene81916.t1.exon4;Parent=MS.gene81916.t1 |
| chr6.4 | CDS | 55814035 | 55814112 | 55814035 | ID=cds.MS.gene81916.t1;Parent=MS.gene81916.t1 |
| chr6.4 | exon | 55813779 | 55813931 | 55813779 | ID=MS.gene81916.t1.exon5;Parent=MS.gene81916.t1 |
| chr6.4 | CDS | 55813779 | 55813931 | 55813779 | ID=cds.MS.gene81916.t1;Parent=MS.gene81916.t1 |
| chr6.4 | exon | 55813541 | 55813649 | 55813541 | ID=MS.gene81916.t1.exon6;Parent=MS.gene81916.t1 |
| chr6.4 | CDS | 55813541 | 55813649 | 55813541 | ID=cds.MS.gene81916.t1;Parent=MS.gene81916.t1 |
| chr6.4 | exon | 55813255 | 55813421 | 55813255 | ID=MS.gene81916.t1.exon7;Parent=MS.gene81916.t1 |
| chr6.4 | CDS | 55813255 | 55813421 | 55813255 | ID=cds.MS.gene81916.t1;Parent=MS.gene81916.t1 |
| chr6.4 | exon | 55812861 | 55813173 | 55812861 | ID=MS.gene81916.t1.exon8;Parent=MS.gene81916.t1 |
| chr6.4 | CDS | 55812861 | 55813173 | 55812861 | ID=cds.MS.gene81916.t1;Parent=MS.gene81916.t1 |
| chr6.4 | exon | 55811802 | 55811873 | 55811802 | ID=MS.gene81916.t1.exon9;Parent=MS.gene81916.t1 |
| chr6.4 | CDS | 55811802 | 55811873 | 55811802 | ID=cds.MS.gene81916.t1;Parent=MS.gene81916.t1 |
| chr6.4 | exon | 55810950 | 55811264 | 55810950 | ID=MS.gene81916.t1.exon10;Parent=MS.gene81916.t1 |
| chr6.4 | CDS | 55810950 | 55811264 | 55810950 | ID=cds.MS.gene81916.t1;Parent=MS.gene81916.t1 |
| chr6.4 | exon | 55809896 | 55810026 | 55809896 | ID=MS.gene81916.t1.exon11;Parent=MS.gene81916.t1 |
| chr6.4 | CDS | 55809896 | 55810026 | 55809896 | ID=cds.MS.gene81916.t1;Parent=MS.gene81916.t1 |
| Gene Sequence |
| Protein sequence |
