AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064746

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064746.t1 MTR_3g113720 99.622 529 2 0 1 529 1 529 0.0 1095
MS.gene064746.t1 MTR_8g075990 62.330 515 191 1 14 528 23 534 0.0 638
MS.gene064746.t1 MTR_5g085730 44.798 471 246 9 58 519 32 497 6.59e-138 409
MS.gene064746.t1 MTR_8g099410 46.482 469 237 10 58 518 29 491 8.68e-137 406
MS.gene064746.t1 MTR_4g074960 43.579 475 249 7 58 521 29 495 5.26e-136 407
MS.gene064746.t1 MTR_8g099410 46.482 469 237 10 58 518 29 491 2.81e-135 406
MS.gene064746.t1 MTR_5g093590 44.304 474 243 10 58 518 35 500 7.75e-132 393
MS.gene064746.t1 MTR_3g080190 43.524 471 252 9 58 519 41 506 7.86e-130 389
MS.gene064746.t1 MTR_5g009970 42.521 468 248 6 58 519 42 494 1.58e-128 384
MS.gene064746.t1 MTR_1g037340 44.563 469 239 10 58 518 26 481 1.40e-126 379
MS.gene064746.t1 MTR_5g010000 43.644 472 245 7 58 523 41 497 6.79e-125 375
MS.gene064746.t1 MTR_3g105230 41.850 454 242 7 58 506 31 467 1.15e-123 371
MS.gene064746.t1 MTR_3g117500 42.827 474 250 9 56 519 23 485 3.21e-122 368
MS.gene064746.t1 MTR_3g080810 42.004 469 253 8 56 516 34 491 1.00e-121 367
MS.gene064746.t1 MTR_3g023740 41.453 468 252 7 58 520 31 481 1.15e-118 358
MS.gene064746.t1 MTR_2g028480 41.698 530 267 14 14 518 77 589 3.78e-114 351
MS.gene064746.t1 MTR_4g035955 40.977 471 255 9 53 516 10 464 1.21e-113 345
MS.gene064746.t1 MTR_5g009970 41.452 427 230 5 98 519 9 420 3.14e-113 342
MS.gene064746.t1 MTR_8g104820 41.300 477 247 11 56 516 29 488 3.97e-113 345
MS.gene064746.t1 MTR_3g010330 41.880 468 248 10 58 516 26 478 5.67e-112 341
MS.gene064746.t1 MTR_4g035930 40.343 466 255 8 58 516 16 465 2.79e-110 336
MS.gene064746.t1 MTR_3g082440 39.212 533 285 15 14 524 82 597 6.79e-106 330
MS.gene064746.t1 MTR_5g009970 40.686 408 222 5 117 519 1 393 2.49e-104 318
MS.gene064746.t1 MTR_1g088190 38.923 483 257 10 51 525 33 485 4.53e-103 318
MS.gene064746.t1 MTR_4g035975 38.703 478 260 12 56 516 26 487 1.42e-101 315
MS.gene064746.t1 MTR_3g090540 36.981 530 282 18 18 519 76 581 3.77e-95 301
MS.gene064746.t1 MTR_5g009970 40.476 336 180 5 189 519 5 325 2.29e-79 252
MS.gene064746.t1 MTR_1g088190 39.557 316 158 8 51 362 33 319 1.06e-58 198
MS.gene064746.t1 MTR_1g037320 45.912 159 86 0 117 275 1 159 6.44e-38 141
MS.gene064746.t1 MTR_1g037320 45.082 122 61 3 400 516 169 289 1.82e-27 112
MS.gene064746.t1 MTR_4g128810 44.586 157 86 1 373 528 187 343 6.77e-37 140
MS.gene064746.t1 MTR_7g108925 37.576 165 98 2 366 526 43 206 2.20e-34 129
MS.gene064746.t1 MTR_0393s0050 38.931 131 74 3 375 500 29 158 7.86e-23 96.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064746.t1 AT1G19940 68.371 528 154 4 1 528 1 515 0.0 709
MS.gene064746.t1 AT1G19940 68.371 528 154 4 1 528 1 515 0.0 709
MS.gene064746.t1 AT1G75680 69.187 529 157 5 1 528 1 524 0.0 708
MS.gene064746.t1 AT1G19940 65.952 420 130 4 1 420 1 407 0.0 546
MS.gene064746.t1 AT4G11050 45.798 476 244 9 58 525 27 496 1.60e-139 414
MS.gene064746.t1 AT4G11050 46.008 476 243 10 58 525 27 496 9.61e-139 415
MS.gene064746.t1 AT4G11050 46.008 476 243 10 58 525 27 496 1.07e-138 415
MS.gene064746.t1 AT1G64390 44.676 479 251 9 58 528 26 498 1.49e-136 409
MS.gene064746.t1 AT2G32990 43.644 472 244 10 58 516 40 502 3.69e-131 392
MS.gene064746.t1 AT2G44540 44.397 473 247 7 52 518 28 490 1.65e-128 384
MS.gene064746.t1 AT2G44550 45.435 471 238 9 53 516 29 487 2.93e-128 383
MS.gene064746.t1 AT2G44560 45.032 473 244 8 52 518 28 490 4.58e-126 378
MS.gene064746.t1 AT1G48930 46.055 469 235 7 58 516 31 491 3.91e-125 380
MS.gene064746.t1 AT2G44570 42.887 471 252 9 55 518 31 491 3.72e-122 368
MS.gene064746.t1 AT4G23560 42.463 471 251 6 57 522 23 478 2.12e-119 360
MS.gene064746.t1 AT1G71380 42.706 473 248 9 52 516 19 476 1.11e-118 358
MS.gene064746.t1 AT4G02290 41.667 468 255 9 56 516 51 507 1.11e-118 360
MS.gene064746.t1 AT1G02800 41.983 474 255 10 55 521 41 501 6.09e-118 357
MS.gene064746.t1 AT3G43860 41.845 466 249 7 58 518 35 483 3.02e-117 355
MS.gene064746.t1 AT3G43860 41.845 466 249 7 58 518 35 483 3.02e-117 355
MS.gene064746.t1 AT1G22880 42.616 474 249 9 58 523 25 483 5.03e-117 354
MS.gene064746.t1 AT4G09740 42.340 470 251 7 58 522 24 478 6.64e-117 353
MS.gene064746.t1 AT4G39010 40.764 471 259 9 56 516 28 488 6.45e-115 349
MS.gene064746.t1 AT1G23210 40.000 470 254 9 58 515 29 482 5.71e-114 347
MS.gene064746.t1 AT1G70710 40.127 471 252 9 58 515 29 482 6.54e-114 347
MS.gene064746.t1 AT4G39000 39.496 476 268 9 51 516 19 484 5.85e-111 339
MS.gene064746.t1 AT5G49720 40.566 530 273 14 14 518 74 586 3.71e-108 336
MS.gene064746.t1 AT4G24260 43.149 489 244 14 58 522 109 587 9.34e-105 327
MS.gene064746.t1 AT4G38990 37.654 486 268 12 51 516 17 487 1.87e-100 312
MS.gene064746.t1 AT1G65610 36.484 529 298 13 14 521 82 593 3.10e-100 315
MS.gene064746.t1 AT1G22880 41.546 414 220 8 117 523 1 399 3.54e-99 305
MS.gene064746.t1 AT4G02290 40.148 406 226 8 117 516 1 395 1.39e-95 296
MS.gene064746.t1 AT2G44570 41.514 383 212 7 55 435 31 403 6.39e-89 279
MS.gene064746.t1 AT4G39010 39.516 372 209 8 56 421 28 389 8.75e-83 263
MS.gene064746.t1 AT1G22880 44.728 313 155 7 58 366 25 323 8.63e-71 230
MS.gene064746.t1 AT4G24260 42.119 387 193 13 58 420 109 488 7.89e-70 232
MS.gene064746.t1 AT4G24260 44.164 317 150 11 58 352 109 420 1.63e-63 214
MS.gene064746.t1 AT4G38990 36.311 347 183 7 51 392 17 330 1.44e-59 201

Find 121 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTATTGCGTTTGTGATTC+TGG 0.168400 3.4:-97777072 MS.gene064746:CDS
GAGCATAATCTTCTCCATTT+TGG 0.188257 3.4:+97775776 None:intergenic
GGAGAAGATTATGCTCAATT+TGG 0.211354 3.4:-97775769 MS.gene064746:CDS
TATTATAACTCAACTGGATA+TGG 0.212670 3.4:-97775874 MS.gene064746:CDS
TTTATATAGATGGTCTGATA+TGG 0.236900 3.4:-97774916 MS.gene064746:intron
ATGAGACTTACATTGATTCT+AGG 0.242483 3.4:-97774146 MS.gene064746:CDS
GGAGAATGTTCTGTATATTC+AGG 0.309453 3.4:-97776283 MS.gene064746:intron
TCGTGGGCAATTCTAGAATA+TGG 0.312428 3.4:-97776393 MS.gene064746:CDS
AGCAATGGCATCAGCATCTT+TGG 0.319777 3.4:-97776016 MS.gene064746:CDS
GGAGGACCGGGAACCGGTTC+GGG 0.321906 3.4:+97776984 None:intergenic
TTTGTGGCTGTTGGAGAGTC+TGG 0.335910 3.4:+97775271 None:intergenic
GAGAGGGGATTCGGCTCTTA+AGG 0.338315 3.4:-97776514 MS.gene064746:CDS
CAGTATGTGACTGGCCAAAA+TGG 0.350134 3.4:-97775790 MS.gene064746:CDS
GCCGGGGATCACATGAAGTT+TGG 0.352977 3.4:-97776447 MS.gene064746:CDS
CTTTCAAGTTCATATGGTTC+CGG 0.354604 3.4:-97775343 MS.gene064746:CDS
GATAAACCCGAACCGGTTCC+CGG 0.365719 3.4:-97776990 MS.gene064746:CDS
TTATAATATGTCGCAACTTC+AGG 0.368599 3.4:+97775889 None:intergenic
TGTCCCAACTGAACCAGGTT+GGG 0.383206 3.4:+97775743 None:intergenic
AGGAGGACCGGGAACCGGTT+CGG 0.385546 3.4:+97776983 None:intergenic
ATTATAACTCAACTGGATAT+GGG 0.400764 3.4:-97775873 MS.gene064746:CDS
AAGGGCCTTTCAAGTTCATA+TGG 0.416309 3.4:-97775349 MS.gene064746:CDS
TCTCGTCAATGCTCATCCTT+CGG 0.427984 3.4:-97776304 MS.gene064746:CDS
AATAAGTTGGAGAGGGGATT+CGG 0.430660 3.4:-97776523 MS.gene064746:CDS
AATGGATGCTGTTGGCCAAT+TGG 0.431030 3.4:-97776364 MS.gene064746:CDS
TTCCAGGCTGATTACGTGTT+GGG 0.431458 3.4:-97774357 MS.gene064746:intron
TTCAGCTGCAACATCTGATC+CGG 0.435202 3.4:+97776047 None:intergenic
ATCAATGGCACCAGGAGGAC+CGG 0.439759 3.4:+97776971 None:intergenic
GCGACATATTATAACTCAAC+TGG 0.441782 3.4:-97775880 MS.gene064746:CDS
CCGAATCCCAATGTAGCTAC+TGG 0.444550 3.4:-97774195 MS.gene064746:CDS
GTTGCAAGGATGGGTGGCAG+TGG 0.446186 3.4:-97774233 MS.gene064746:CDS
TCTAGAATATGGAGATCAAA+TGG 0.446875 3.4:-97776382 MS.gene064746:CDS
ATCTAGAGTAAGCTTCTTCA+AGG 0.446995 3.4:-97775374 MS.gene064746:CDS
AGCTGAAACTGCAGCAGCAA+TGG 0.448020 3.4:-97776031 MS.gene064746:CDS
AAGTTTAGTCACCACATCTT+CGG 0.449573 3.4:-97774061 MS.gene064746:CDS
GCACCAGGAGGACCGGGAAC+CGG 0.455702 3.4:+97776978 None:intergenic
TCGAGACTTTGCCAGATCTC+AGG 0.456961 3.4:-97774762 MS.gene064746:intron
TTATATAGATGGTCTGATAT+GGG 0.457104 3.4:-97774915 MS.gene064746:intron
AGTTGGGACAACAAGCTTGC+CGG 0.460646 3.4:-97775730 MS.gene064746:CDS
CAACACTTGTGATCTGCAAC+AGG 0.466398 3.4:+97776129 None:intergenic
CTCTGTGATGCACAAATTGT+GGG 0.469293 3.4:+97774286 None:intergenic
AATCTTGTGCTGGTTCCAAT+TGG 0.470000 3.4:+97776349 None:intergenic
TAGAGAACAACAAAATAAGT+TGG 0.470544 3.4:-97776536 MS.gene064746:CDS
CCAGTAGCTACATTGGGATT+CGG 0.470664 3.4:+97774195 None:intergenic
CTCAATTTGGAAGCCCAACC+TGG 0.472205 3.4:-97775756 MS.gene064746:CDS
GTCTGATATGGGTGAGTGAA+TGG 0.473028 3.4:-97774904 MS.gene064746:CDS
GCTAAGAATGCAGATGCAAC+AGG 0.473355 3.4:+97774866 None:intergenic
ATGAATGCATACCTGAGATC+TGG 0.474526 3.4:+97774751 None:intergenic
CTTGTTGTCCCAACTGAACC+AGG 0.475271 3.4:+97775738 None:intergenic
AGGATACGTTCACTTGTAAG+AGG 0.479664 3.4:+97776073 None:intergenic
CAAAAGGAGGATGTTGTGGT+TGG 0.485199 3.4:-97777094 MS.gene064746:CDS
GAACCGGTTCCCGGTCCTCC+TGG 0.489943 3.4:-97776981 MS.gene064746:CDS
GTAGCTACTGGAGCACTTGT+TGG 0.494083 3.4:-97774183 MS.gene064746:CDS
GTAAGCTTCTTCAAGGCAAA+GGG 0.494576 3.4:-97775367 MS.gene064746:CDS
AACAACAAAATAAGTTGGAG+AGG 0.494998 3.4:-97776531 MS.gene064746:CDS
AAATTCAGATAAACCCGAAC+CGG 0.495107 3.4:-97776997 MS.gene064746:CDS
CAAAAGGAATGTATGATGCC+GGG 0.495516 3.4:-97776464 MS.gene064746:CDS
GCAGATTTAGATCTAACAAA+AGG 0.496053 3.4:-97776480 MS.gene064746:CDS
TCGAAGATCTGATGGTTTGA+AGG 0.496987 3.4:+97774781 None:intergenic
CCTCTGTGATGCACAAATTG+TGG 0.501280 3.4:+97774285 None:intergenic
GAAGCCCAACCTGGTTCAGT+TGG 0.502198 3.4:-97775747 MS.gene064746:CDS
GTGATTCTGGCTCTTGTGGT+CGG 0.505371 3.4:-97777059 MS.gene064746:CDS
AAGCCCAACCTGGTTCAGTT+GGG 0.506162 3.4:-97775746 MS.gene064746:CDS
ACAAAAGGAATGTATGATGC+CGG 0.506505 3.4:-97776465 MS.gene064746:CDS
TATAACAGTGCTGTCATAGT+TGG 0.509805 3.4:-97774093 MS.gene064746:CDS
TGCAACATCTGATCCGGGAC+AGG 0.511750 3.4:+97776053 None:intergenic
GCTACTGGAGCACTTGTTGG+TGG 0.515300 3.4:-97774180 MS.gene064746:CDS
ACCTGTAGCATGGTAGAGCC+AGG 0.516769 3.4:+97775828 None:intergenic
TTGTCCCAACTGAACCAGGT+TGG 0.523981 3.4:+97775742 None:intergenic
AACCAGCACAAGATTCTCTC+AGG 0.525412 3.4:-97776341 MS.gene064746:CDS
TACTGCCTCAGTGCTATCGT+GGG 0.526117 3.4:-97776409 MS.gene064746:CDS
TAGTTTAGGAGAAGGATTGA+AGG 0.527196 3.4:+97774037 None:intergenic
AGCTCTTCATACCTGAGTTC+CGG 0.531252 3.4:+97775711 None:intergenic
CACCTGAGAGAATCTTGTGC+TGG 0.533013 3.4:+97776339 None:intergenic
AGTGCTCCAGTAGCTACATT+GGG 0.536888 3.4:+97774189 None:intergenic
CAACAAGCTTGCCGGAACTC+AGG 0.539769 3.4:-97775722 MS.gene064746:intron
TCCTACCTTCAGTATGTGAC+TGG 0.540197 3.4:-97775799 MS.gene064746:CDS
CTTCCAGGCTGATTACGTGT+TGG 0.540229 3.4:-97774358 MS.gene064746:intron
CGGAACCATATGAACTTGAA+AGG 0.540605 3.4:+97775344 None:intergenic
AAGTGCTCCAGTAGCTACAT+TGG 0.543749 3.4:+97774188 None:intergenic
GCAAAGTCTCGAAGATCTGA+TGG 0.544007 3.4:+97774773 None:intergenic
ATGTAAGTCTCATTTAAGAA+AGG 0.549620 3.4:+97774156 None:intergenic
GTTTGTGATTCTGGCTCTTG+TGG 0.550904 3.4:-97777063 MS.gene064746:CDS
AGTAAGCTTCTTCAAGGCAA+AGG 0.552883 3.4:-97775368 MS.gene064746:CDS
ACCTGGCTCTACCATGCTAC+AGG 0.553331 3.4:-97775829 MS.gene064746:CDS
ACCAAACTTCATGTGATCCC+CGG 0.556653 3.4:+97776446 None:intergenic
CAAGTGAACGTATCCTGTCC+CGG 0.560701 3.4:-97776066 MS.gene064746:CDS
GGATTGAAGGGCCGAAGATG+TGG 0.569561 3.4:+97774050 None:intergenic
CTGTTGCAGATCACAAGTGT+TGG 0.571688 3.4:-97776128 MS.gene064746:CDS
TCAATGGCACCAGGAGGACC+GGG 0.573055 3.4:+97776972 None:intergenic
ACAGCACTGTTATATGTGCT+TGG 0.573334 3.4:+97774102 None:intergenic
GGGGATTCGGCTCTTAAGGA+TGG 0.573397 3.4:-97776510 MS.gene064746:CDS
TTACTGCCTCAGTGCTATCG+TGG 0.577110 3.4:-97776410 MS.gene064746:CDS
AGTTTAGGAGAAGGATTGAA+GGG 0.578741 3.4:+97774038 None:intergenic
ACATACTATAGTTTAGGAGA+AGG 0.578891 3.4:+97774029 None:intergenic
TTATAACTCAACTGGATATG+GGG 0.582247 3.4:-97775872 MS.gene064746:CDS
AAGACCACACATTACAGCCT+CGG 0.582653 3.4:+97775297 None:intergenic
ACAACAAAATAAGTTGGAGA+GGG 0.586545 3.4:-97776530 MS.gene064746:CDS
AGCTACATTGGGATTCGGAT+CGG 0.590300 3.4:+97774200 None:intergenic
TCTAGGAACAATTCTATGCA+AGG 0.591369 3.4:-97774129 MS.gene064746:CDS
TCAGCTGCAACATCTGATCC+GGG 0.591508 3.4:+97776048 None:intergenic
CGTTCCTCAGTAATTAACTC+AGG 0.597205 3.4:+97776099 None:intergenic
AGATCAAAAGGAGGATGTTG+TGG 0.599433 3.4:-97777098 MS.gene064746:CDS
ACTGAGGCAGTAAAAGCCAT+AGG 0.613713 3.4:+97776420 None:intergenic
CAGCACAAGATTCTCTCAGG+TGG 0.615600 3.4:-97776338 MS.gene064746:CDS
TTTGGCCAGTCACATACTGA+AGG 0.616951 3.4:+97775794 None:intergenic
AGGAATCATCACCTGTAGCA+TGG 0.618916 3.4:+97775818 None:intergenic
AAACTGGTTGCAAGGATGGG+TGG 0.621140 3.4:-97774239 MS.gene064746:CDS
AAAAGGAATGTATGATGCCG+GGG 0.628087 3.4:-97776463 MS.gene064746:CDS
GGATACGTTCACTTGTAAGA+GGG 0.631666 3.4:+97776074 None:intergenic
GGAGATCAAATGGATGCTGT+TGG 0.641613 3.4:-97776372 MS.gene064746:CDS
TCCGCCGAGGCTGTAATGTG+TGG 0.641659 3.4:-97775301 MS.gene064746:CDS
ACCAGAAAACTCATATGCTG+AGG 0.647665 3.4:+97774327 None:intergenic
CAACAAAATAAGTTGGAGAG+GGG 0.657191 3.4:-97776529 MS.gene064746:CDS
ATATACAGAACATTCTCCGA+AGG 0.657437 3.4:+97776288 None:intergenic
GCCAGTCACATACTGAAGGT+AGG 0.663540 3.4:+97775798 None:intergenic
CCACAATTTGTGCATCACAG+AGG 0.673056 3.4:-97774285 MS.gene064746:CDS
ACCACACATTACAGCCTCGG+CGG 0.674391 3.4:+97775300 None:intergenic
GATACGTTCACTTGTAAGAG+GGG 0.676663 3.4:+97776075 None:intergenic
TAGACCTGAGTTAATTACTG+AGG 0.715470 3.4:-97776103 MS.gene064746:CDS
AAATTATAGAAAATCCGCCG+AGG 0.730261 3.4:-97775314 MS.gene064746:CDS
AATTGCCCACGATAGCACTG+AGG 0.772045 3.4:+97776404 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATAAAAAAAAACACTT+CGG + chr3.4:97775550-97775569 None:intergenic 10.0%
!! TAGAAATATATTACTAAAAA+TGG + chr3.4:97776182-97776201 None:intergenic 10.0%
!! TATAAAACATTTAATGTTAT+TGG + chr3.4:97776577-97776596 None:intergenic 10.0%
!! ATTTATCTGACATTAAATAA+AGG - chr3.4:97776621-97776640 MS.gene064746:intron 15.0%
!! GTAAATTCTTCTTATATTAA+GGG + chr3.4:97776457-97776476 None:intergenic 15.0%
!! TTAATTAGTATAAAATTGAG+TGG - chr3.4:97776534-97776553 MS.gene064746:CDS 15.0%
!! TTTAGTATAAATTTACATGT+AGG + chr3.4:97776600-97776619 None:intergenic 15.0%
!! TTTATCTGACATTAAATAAA+GGG - chr3.4:97776622-97776641 MS.gene064746:intron 15.0%
!!! TTCTTTTTCTTTTATATAGA+TGG - chr3.4:97776228-97776247 MS.gene064746:intron 15.0%
!!! TTTAATGTTATTGGTTTAAT+TGG + chr3.4:97776568-97776587 None:intergenic 15.0%
!! CTAATCAGATTATAAGTTAA+GGG + chr3.4:97776107-97776126 None:intergenic 20.0%
!! GGTAAATTCTTCTTATATTA+AGG + chr3.4:97776458-97776477 None:intergenic 20.0%
!!! AAAACAGTTATTTACTTTTG+CGG - chr3.4:97775210-97775229 MS.gene064746:intron 20.0%
!!! AATAAGTAGAAGTATCATTT+AGG + chr3.4:97775636-97775655 None:intergenic 20.0%
!!! AATAGTTTTATTAGATAGTC+TGG - chr3.4:97776134-97776153 MS.gene064746:CDS 20.0%
!!! AGGAGTTGTATTTTTTTTTT+TGG - chr3.4:97776492-97776511 MS.gene064746:CDS 20.0%
!!! ATAATCCTTTTTTTCATTCT+CGG - chr3.4:97774264-97774283 MS.gene064746:CDS 20.0%
!!! ATCTGAATCACATTTTATAT+TGG + chr3.4:97776352-97776371 None:intergenic 20.0%
!!! TCTGAATCACATTTTATATT+GGG + chr3.4:97776351-97776370 None:intergenic 20.0%
! AATGCTTTCATGTATATACT+AGG - chr3.4:97775672-97775691 MS.gene064746:intron 25.0%
! AATTTGTGTATTCAATGCAT+TGG - chr3.4:97776003-97776022 MS.gene064746:CDS 25.0%
! ACGCACAATTTCTTATAATA+GGG - chr3.4:97776716-97776735 MS.gene064746:intron 25.0%
! ATGCTTTCATGTATATACTA+GGG - chr3.4:97775673-97775692 MS.gene064746:intron 25.0%
! ATGTAAGTCTCATTTAAGAA+AGG + chr3.4:97777001-97777020 None:intergenic 25.0%
! ATTATAACTCAACTGGATAT+GGG - chr3.4:97775281-97775300 MS.gene064746:CDS 25.0%
! GCTAATCAGATTATAAGTTA+AGG + chr3.4:97776108-97776127 None:intergenic 25.0%
! TACGCACAATTTCTTATAAT+AGG - chr3.4:97776715-97776734 MS.gene064746:intron 25.0%
! TAGAATTTGGAAACAAGATT+CGG + chr3.4:97775470-97775489 None:intergenic 25.0%
! TAGAGAACAACAAAATAAGT+TGG - chr3.4:97774618-97774637 MS.gene064746:intron 25.0%
! TATTATAACTCAACTGGATA+TGG - chr3.4:97775280-97775299 MS.gene064746:CDS 25.0%
! TTATATAGATGGTCTGATAT+GGG - chr3.4:97776239-97776258 MS.gene064746:intron 25.0%
! TTCATTTATCAAAATCGATG+TGG - chr3.4:97774990-97775009 MS.gene064746:intron 25.0%
! TTGTGAAATGCAAGAAATAA+AGG + chr3.4:97774293-97774312 None:intergenic 25.0%
! TTGTTTCCAAATTCTAAACT+AGG - chr3.4:97775474-97775493 MS.gene064746:intron 25.0%
! TTTATATAGATGGTCTGATA+TGG - chr3.4:97776238-97776257 MS.gene064746:intron 25.0%
!! AATGATCCTAGTTTAGAATT+TGG + chr3.4:97775483-97775502 None:intergenic 25.0%
!! CTGACTTGATATTAACTAAT+GGG - chr3.4:97775943-97775962 MS.gene064746:CDS 25.0%
!! TCTGACTTGATATTAACTAA+TGG - chr3.4:97775942-97775961 MS.gene064746:CDS 25.0%
!!! AAGAAATTGTGCGTATTTTT+TGG + chr3.4:97776710-97776729 None:intergenic 25.0%
!!! AGAAGCATATTTTTGATCAA+TGG + chr3.4:97774201-97774220 None:intergenic 25.0%
!!! TAATGTTTTAAAAACCGAAC+TGG - chr3.4:97774384-97774403 MS.gene064746:intron 25.0%
!!! TGGTTTTGAAAACATTGTTT+TGG - chr3.4:97774523-97774542 MS.gene064746:intron 25.0%
!!! TTTTTTTTTGGTACAGATCA+AGG - chr3.4:97776504-97776523 MS.gene064746:CDS 25.0%
AAAACTTGTCTAATACTTCC+AGG - chr3.4:97776781-97776800 MS.gene064746:intron 30.0%
AGAGAAAAATCGAGATCAAA+AGG - chr3.4:97774044-97774063 MS.gene064746:CDS 30.0%
ATAATCCTTCTTCTTAATGC+AGG - chr3.4:97775750-97775769 MS.gene064746:CDS 30.0%
ATTTCTTGCATTTCACAATG+TGG - chr3.4:97774295-97774314 MS.gene064746:CDS 30.0%
GCAGATTTAGATCTAACAAA+AGG - chr3.4:97774674-97774693 MS.gene064746:intron 30.0%
GTCTATTCTATGTAATGTGT+AGG + chr3.4:97775585-97775604 None:intergenic 30.0%
TAGGATAAGATAATGCCATA+AGG + chr3.4:97775617-97775636 None:intergenic 30.0%
TGCTTTCATGTATATACTAG+GGG - chr3.4:97775674-97775693 MS.gene064746:intron 30.0%
TTATAACTCAACTGGATATG+GGG - chr3.4:97775282-97775301 MS.gene064746:CDS 30.0%
TTATAATATGTCGCAACTTC+AGG + chr3.4:97775268-97775287 None:intergenic 30.0%
TTTACCAAAATCACAGATCA+AGG - chr3.4:97776472-97776491 MS.gene064746:CDS 30.0%
! AACAACAAAATAAGTTGGAG+AGG - chr3.4:97774623-97774642 MS.gene064746:intron 30.0%
! ACAACAAAATAAGTTGGAGA+GGG - chr3.4:97774624-97774643 MS.gene064746:intron 30.0%
! CGGATTTTCTATAATTTTGG+AGG + chr3.4:97775837-97775856 None:intergenic 30.0%
! TAGGATCATTTTATAGCTGA+AGG - chr3.4:97775493-97775512 MS.gene064746:intron 30.0%
! TCTAGAATATGGAGATCAAA+TGG - chr3.4:97774772-97774791 MS.gene064746:CDS 30.0%
! TTCTGTATATTCAGGTTAGT+TGG - chr3.4:97774879-97774898 MS.gene064746:CDS 30.0%
! TTTTTGTAGAATACTCTCTC+TGG - chr3.4:97776431-97776450 MS.gene064746:CDS 30.0%
!! AATACTTTGGTGGGTTATTT+AGG + chr3.4:97774479-97774498 None:intergenic 30.0%
!! ATGAGACTTACATTGATTCT+AGG - chr3.4:97777008-97777027 MS.gene064746:CDS 30.0%
!! CAATGTGGTTGGTTTATTAT+AGG - chr3.4:97774310-97774329 MS.gene064746:CDS 30.0%
!! TTTTCTATAATTTTGGAGGC+CGG + chr3.4:97775833-97775852 None:intergenic 30.0%
!!! AATTTTCATAAAAAGTGCCC+CGG + chr3.4:97775987-97776006 None:intergenic 30.0%
!!! AGTTTTATTAGATAGTCTGG+AGG - chr3.4:97776137-97776156 MS.gene064746:CDS 30.0%
AAATTATAGAAAATCCGCCG+AGG - chr3.4:97775840-97775859 MS.gene064746:CDS 35.0%
AAATTCAGATAAACCCGAAC+CGG - chr3.4:97774157-97774176 MS.gene064746:CDS 35.0%
AACCGAACTGGATATTGAAT+CGG - chr3.4:97774396-97774415 MS.gene064746:intron 35.0%
AAGTTTAGTCACCACATCTT+CGG - chr3.4:97777093-97777112 MS.gene064746:CDS 35.0%
ACAAAAGGAATGTATGATGC+CGG - chr3.4:97774689-97774708 MS.gene064746:intron 35.0%
ATAGACTCAATCAAGCCTTA+TGG - chr3.4:97775599-97775618 MS.gene064746:intron 35.0%
ATAGGGATCAGAGATAGTAT+CGG - chr3.4:97776733-97776752 MS.gene064746:intron 35.0%
ATATACAGAACATTCTCCGA+AGG + chr3.4:97774869-97774888 None:intergenic 35.0%
ATCAAGTCAGATAGCATTCA+AGG + chr3.4:97775933-97775952 None:intergenic 35.0%
ATGCTACGGTTCAAATACTT+TGG + chr3.4:97774492-97774511 None:intergenic 35.0%
ATTCCTGCTAATGCAAAAAC+TGG - chr3.4:97776899-97776918 MS.gene064746:intron 35.0%
CAAAACCTGCATTAAGAAGA+AGG + chr3.4:97775758-97775777 None:intergenic 35.0%
CCAAATCAAATCACATGCTA+CGG + chr3.4:97774506-97774525 None:intergenic 35.0%
GAAAAATCGAGATCAAAAGG+AGG - chr3.4:97774047-97774066 MS.gene064746:CDS 35.0%
GCGACATATTATAACTCAAC+TGG - chr3.4:97775274-97775293 MS.gene064746:CDS 35.0%
GGAGAAGATTATGCTCAATT+TGG - chr3.4:97775385-97775404 MS.gene064746:CDS 35.0%
GGAGAATGTTCTGTATATTC+AGG - chr3.4:97774871-97774890 MS.gene064746:CDS 35.0%
GGTAACCGAGAATGAAAAAA+AGG + chr3.4:97774272-97774291 None:intergenic 35.0%
GTTTATTGCGTTTGTGATTC+TGG - chr3.4:97774082-97774101 MS.gene064746:CDS 35.0%
TAATGCAAAAACTGGTTGCA+AGG - chr3.4:97776907-97776926 MS.gene064746:intron 35.0%
TACGGTTCAAATACTTTGGT+GGG + chr3.4:97774488-97774507 None:intergenic 35.0%
TAGACCTGAGTTAATTACTG+AGG - chr3.4:97775051-97775070 MS.gene064746:intron 35.0%
TATAACAGTGCTGTCATAGT+TGG - chr3.4:97777061-97777080 MS.gene064746:CDS 35.0%
TCTAGGAACAATTCTATGCA+AGG - chr3.4:97777025-97777044 MS.gene064746:CDS 35.0%
TTTATCAAAATCGATGTGGC+AGG - chr3.4:97774994-97775013 MS.gene064746:intron 35.0%
! AACTCCTTGATCTGTGATTT+TGG + chr3.4:97776479-97776498 None:intergenic 35.0%
! ATAACTGTTTTGCATGCTTG+AGG + chr3.4:97775201-97775220 None:intergenic 35.0%
! ATCTAGAGTAAGCTTCTTCA+AGG - chr3.4:97775780-97775799 MS.gene064746:CDS 35.0%
! CAACAAAATAAGTTGGAGAG+GGG - chr3.4:97774625-97774644 MS.gene064746:intron 35.0%
! GAGCATAATCTTCTCCATTT+TGG + chr3.4:97775381-97775400 None:intergenic 35.0%
!! CGGCGGATTTTCTATAATTT+TGG + chr3.4:97775840-97775859 None:intergenic 35.0%
!! CTTTCAAGTTCATATGGTTC+CGG - chr3.4:97775811-97775830 MS.gene064746:CDS 35.0%
!! TATTTTTGATCAATGGCACC+AGG + chr3.4:97774194-97774213 None:intergenic 35.0%
!!! ACTATCAGTTCTGCTTTTTG+TGG + chr3.4:97775902-97775921 None:intergenic 35.0%
!!! ATTTTCATAAAAAGTGCCCC+GGG + chr3.4:97775986-97776005 None:intergenic 35.0%
!!! CATGAAGTTTGGTTTTCCTA+TGG - chr3.4:97774718-97774737 MS.gene064746:intron 35.0%
AAAAGGAATGTATGATGCCG+GGG - chr3.4:97774691-97774710 MS.gene064746:intron 40.0%
AACGATCGTGACACTCTTTA+AGG + chr3.4:97776077-97776096 None:intergenic 40.0%
ACAGCACTGTTATATGTGCT+TGG + chr3.4:97777055-97777074 None:intergenic 40.0%
ACCAGAAAACTCATATGCTG+AGG + chr3.4:97776830-97776849 None:intergenic 40.0%
AGATCAAAAGGAGGATGTTG+TGG - chr3.4:97774056-97774075 MS.gene064746:CDS 40.0%
AGGATACGTTCACTTGTAAG+AGG + chr3.4:97775084-97775103 None:intergenic 40.0%
AGTAAGCTTCTTCAAGGCAA+AGG - chr3.4:97775786-97775805 MS.gene064746:CDS 40.0%
ATGAATGCATACCTGAGATC+TGG + chr3.4:97776406-97776425 None:intergenic 40.0%
CAAAAACTGGTTGCAAGGAT+GGG - chr3.4:97776912-97776931 MS.gene064746:intron 40.0%
CAAAAGGAATGTATGATGCC+GGG - chr3.4:97774690-97774709 MS.gene064746:intron 40.0%
CCGTAGCATGTGATTTGATT+TGG - chr3.4:97774503-97774522 MS.gene064746:intron 40.0%
CGGAACCATATGAACTTGAA+AGG + chr3.4:97775813-97775832 None:intergenic 40.0%
CGTTCCTCAGTAATTAACTC+AGG + chr3.4:97775058-97775077 None:intergenic 40.0%
CTACGGTTCAAATACTTTGG+TGG + chr3.4:97774489-97774508 None:intergenic 40.0%
CTCTGTGATGCACAAATTGT+GGG + chr3.4:97776871-97776890 None:intergenic 40.0%
CTTGCATTTCACAATGTGGT+TGG - chr3.4:97774299-97774318 MS.gene064746:CDS 40.0%
GACCGTTAACCAACTAGAAT+GGG + chr3.4:97774565-97774584 None:intergenic 40.0%
GATACGTTCACTTGTAAGAG+GGG + chr3.4:97775082-97775101 None:intergenic 40.0%
GGATACGTTCACTTGTAAGA+GGG + chr3.4:97775083-97775102 None:intergenic 40.0%
GTAAGCTTCTTCAAGGCAAA+GGG - chr3.4:97775787-97775806 MS.gene064746:CDS 40.0%
TATTGAATCGGCAAGATCTC+TGG - chr3.4:97774408-97774427 MS.gene064746:intron 40.0%
TCGAAGATCTGATGGTTTGA+AGG + chr3.4:97776376-97776395 None:intergenic 40.0%
TGACCGTTAACCAACTAGAA+TGG + chr3.4:97774566-97774585 None:intergenic 40.0%
TGTTATTCATGTGATGCAGC+TGG - chr3.4:97774590-97774609 MS.gene064746:intron 40.0%
! AATAAGTTGGAGAGGGGATT+CGG - chr3.4:97774631-97774650 MS.gene064746:intron 40.0%
! ATATGGGGATGAGCTTTTGT+GGG - chr3.4:97775297-97775316 MS.gene064746:CDS 40.0%
! CAACCAGTTTTTGCATTAGC+AGG + chr3.4:97776905-97776924 None:intergenic 40.0%
! TCAGCATATGAGTTTTCTGG+TGG - chr3.4:97776829-97776848 MS.gene064746:intron 40.0%
! TCCTCAGCATATGAGTTTTC+TGG - chr3.4:97776826-97776845 MS.gene064746:intron 40.0%
! TGCCCATTCTAGTTGGTTAA+CGG - chr3.4:97774560-97774579 MS.gene064746:intron 40.0%
!! AAGGGCCTTTCAAGTTCATA+TGG - chr3.4:97775805-97775824 MS.gene064746:CDS 40.0%
!! AATCTTGTGCTGGTTCCAAT+TGG + chr3.4:97774808-97774827 None:intergenic 40.0%
!! ACTTTGGTGGGTTATTTAGG+CGG + chr3.4:97774476-97774495 None:intergenic 40.0%
!! ATGAGTTTTCTGGTGGGATA+TGG - chr3.4:97776836-97776855 MS.gene064746:intron 40.0%
!! CAGCATATGAGTTTTCTGGT+GGG - chr3.4:97776830-97776849 MS.gene064746:intron 40.0%
!! TCGTGGGCAATTCTAGAATA+TGG - chr3.4:97774761-97774780 MS.gene064746:intron 40.0%
!! TGCCGATTCAATATCCAGTT+CGG + chr3.4:97774401-97774420 None:intergenic 40.0%
!!! TTTTCATAAAAAGTGCCCCG+GGG + chr3.4:97775985-97776004 None:intergenic 40.0%
AACCAGCACAAGATTCTCTC+AGG - chr3.4:97774813-97774832 MS.gene064746:CDS 45.0%
AAGACCACACATTACAGCCT+CGG + chr3.4:97775860-97775879 None:intergenic 45.0%
AAGTGCTCCAGTAGCTACAT+TGG + chr3.4:97776969-97776988 None:intergenic 45.0%
AATGGATGCTGTTGGCCAAT+TGG - chr3.4:97774790-97774809 MS.gene064746:CDS 45.0%
ACCAAACTTCATGTGATCCC+CGG + chr3.4:97774711-97774730 None:intergenic 45.0%
ACTGAGGCAGTAAAAGCCAT+AGG + chr3.4:97774737-97774756 None:intergenic 45.0%
AGCAATGGCATCAGCATCTT+TGG - chr3.4:97775138-97775157 MS.gene064746:intron 45.0%
AGCTACATTGGGATTCGGAT+CGG + chr3.4:97776957-97776976 None:intergenic 45.0%
AGCTCTTCATACCTGAGTTC+CGG + chr3.4:97775446-97775465 None:intergenic 45.0%
AGGAATCATCACCTGTAGCA+TGG + chr3.4:97775339-97775358 None:intergenic 45.0%
AGTGCTCCAGTAGCTACATT+GGG + chr3.4:97776968-97776987 None:intergenic 45.0%
ATCGTGGTTTCATCGCAGTT+TGG + chr3.4:97774449-97774468 None:intergenic 45.0%
ATGTTGCTGCCCATTCTAGT+TGG - chr3.4:97774553-97774572 MS.gene064746:intron 45.0%
CAAAAGGAGGATGTTGTGGT+TGG - chr3.4:97774060-97774079 MS.gene064746:CDS 45.0%
CAACACTTGTGATCTGCAAC+AGG + chr3.4:97775028-97775047 None:intergenic 45.0%
CCACAATTTGTGCATCACAG+AGG - chr3.4:97776869-97776888 MS.gene064746:intron 45.0%
CCAGTAGCTACATTGGGATT+CGG + chr3.4:97776962-97776981 None:intergenic 45.0%
CCTCTGTGATGCACAAATTG+TGG + chr3.4:97776872-97776891 None:intergenic 45.0%
CTGTTGCAGATCACAAGTGT+TGG - chr3.4:97775026-97775045 MS.gene064746:intron 45.0%
GCAAAAACTGGTTGCAAGGA+TGG - chr3.4:97776911-97776930 MS.gene064746:intron 45.0%
GCAAAGTCTCGAAGATCTGA+TGG + chr3.4:97776384-97776403 None:intergenic 45.0%
GCTAAGAATGCAGATGCAAC+AGG + chr3.4:97776291-97776310 None:intergenic 45.0%
GGAGATCAAATGGATGCTGT+TGG - chr3.4:97774782-97774801 MS.gene064746:CDS 45.0%
GTCTGATATGGGTGAGTGAA+TGG - chr3.4:97776250-97776269 MS.gene064746:intron 45.0%
GTCTGGAGGAACACAAACTA+TGG - chr3.4:97776151-97776170 MS.gene064746:intron 45.0%
TCAAAATCGATGTGGCAGGT+TGG - chr3.4:97774998-97775017 MS.gene064746:intron 45.0%
TCCTACCTTCAGTATGTGAC+TGG - chr3.4:97775355-97775374 MS.gene064746:CDS 45.0%
TCTCGTCAATGCTCATCCTT+CGG - chr3.4:97774850-97774869 MS.gene064746:CDS 45.0%
TTATTTAGGCGGCTCAATCG+TGG + chr3.4:97774465-97774484 None:intergenic 45.0%
TTCAGCTGCAACATCTGATC+CGG + chr3.4:97775110-97775129 None:intergenic 45.0%
TTCCAGGCTGATTACGTGTT+GGG - chr3.4:97776797-97776816 MS.gene064746:intron 45.0%
TTTGGCCAGTCACATACTGA+AGG + chr3.4:97775363-97775382 None:intergenic 45.0%
! ACTTTTGCGGACAAGCATAG+AGG - chr3.4:97775223-97775242 MS.gene064746:intron 45.0%
! CAGTATGTGACTGGCCAAAA+TGG - chr3.4:97775364-97775383 MS.gene064746:CDS 45.0%
! GATATGGGGATGAGCTTTTG+TGG - chr3.4:97775296-97775315 MS.gene064746:CDS 45.0%
! TTTTGATCAATGGCACCAGG+AGG + chr3.4:97774191-97774210 None:intergenic 45.0%
!! GTTTGTGATTCTGGCTCTTG+TGG - chr3.4:97774091-97774110 MS.gene064746:CDS 45.0%
!! TTTCATAAAAAGTGCCCCGG+GGG + chr3.4:97775984-97776003 None:intergenic 45.0%
!!! GTTCTGCTTTTTGTGGCTGT+TGG + chr3.4:97775895-97775914 None:intergenic 45.0%
AAACTGGTTGCAAGGATGGG+TGG - chr3.4:97776915-97776934 MS.gene064746:intron 50.0%
AAATGCTAATGAGTGCCCCC+GGG - chr3.4:97775966-97775985 MS.gene064746:CDS 50.0%
AAGCCCAACCTGGTTCAGTT+GGG - chr3.4:97775408-97775427 MS.gene064746:intron 50.0%
AATTGCCCACGATAGCACTG+AGG + chr3.4:97774753-97774772 None:intergenic 50.0%
AGCTGAAACTGCAGCAGCAA+TGG - chr3.4:97775123-97775142 MS.gene064746:intron 50.0%
AGTTGGGACAACAAGCTTGC+CGG - chr3.4:97775424-97775443 MS.gene064746:intron 50.0%
CAAGTGAACGTATCCTGTCC+CGG - chr3.4:97775088-97775107 MS.gene064746:intron 50.0%
CACCTGAGAGAATCTTGTGC+TGG + chr3.4:97774818-97774837 None:intergenic 50.0%
CAGCACAAGATTCTCTCAGG+TGG - chr3.4:97774816-97774835 MS.gene064746:CDS 50.0%
CCGAATCCCAATGTAGCTAC+TGG - chr3.4:97776959-97776978 MS.gene064746:CDS 50.0%
CTCAATTTGGAAGCCCAACC+TGG - chr3.4:97775398-97775417 MS.gene064746:intron 50.0%
CTTCCAGGCTGATTACGTGT+TGG - chr3.4:97776796-97776815 MS.gene064746:intron 50.0%
GAAATGCTAATGAGTGCCCC+CGG - chr3.4:97775965-97775984 MS.gene064746:CDS 50.0%
GCCAGTCACATACTGAAGGT+AGG + chr3.4:97775359-97775378 None:intergenic 50.0%
TACTGCCTCAGTGCTATCGT+GGG - chr3.4:97774745-97774764 MS.gene064746:intron 50.0%
TCAGCTGCAACATCTGATCC+GGG + chr3.4:97775109-97775128 None:intergenic 50.0%
TCGAGACTTTGCCAGATCTC+AGG - chr3.4:97776392-97776411 MS.gene064746:CDS 50.0%
TCGGCAAGATCTCTGGATCA+TGG - chr3.4:97774415-97774434 MS.gene064746:intron 50.0%
TGTCCCAACTGAACCAGGTT+GGG + chr3.4:97775414-97775433 None:intergenic 50.0%
TTACTGCCTCAGTGCTATCG+TGG - chr3.4:97774744-97774763 MS.gene064746:intron 50.0%
TTGTCCCAACTGAACCAGGT+TGG + chr3.4:97775415-97775434 None:intergenic 50.0%
TTTGTGGCTGTTGGAGAGTC+TGG + chr3.4:97775886-97775905 None:intergenic 50.0%
! CTTGTTGTCCCAACTGAACC+AGG + chr3.4:97775419-97775438 None:intergenic 50.0%
! GTAGCTACTGGAGCACTTGT+TGG - chr3.4:97776971-97776990 MS.gene064746:CDS 50.0%
!! GTGATTCTGGCTCTTGTGGT+CGG - chr3.4:97774095-97774114 MS.gene064746:CDS 50.0%
AATGCTAATGAGTGCCCCCG+GGG - chr3.4:97775967-97775986 MS.gene064746:CDS 55.0%
ACCACACATTACAGCCTCGG+CGG + chr3.4:97775857-97775876 None:intergenic 55.0%
ACCTGTAGCATGGTAGAGCC+AGG + chr3.4:97775329-97775348 None:intergenic 55.0%
ATCAATGGCACCAGGAGGAC+CGG + chr3.4:97774186-97774205 None:intergenic 55.0%
CAACAAGCTTGCCGGAACTC+AGG - chr3.4:97775432-97775451 MS.gene064746:intron 55.0%
GAAGCCCAACCTGGTTCAGT+TGG - chr3.4:97775407-97775426 MS.gene064746:intron 55.0%
GAGAGGGGATTCGGCTCTTA+AGG - chr3.4:97774640-97774659 MS.gene064746:intron 55.0%
GCCGGGGATCACATGAAGTT+TGG - chr3.4:97774707-97774726 MS.gene064746:intron 55.0%
GGATTGAAGGGCCGAAGATG+TGG + chr3.4:97777107-97777126 None:intergenic 55.0%
GGGGATTCGGCTCTTAAGGA+TGG - chr3.4:97774644-97774663 MS.gene064746:intron 55.0%
TGCAACATCTGATCCGGGAC+AGG + chr3.4:97775104-97775123 None:intergenic 55.0%
TGCCCAACACGTAATCAGCC+TGG + chr3.4:97776802-97776821 None:intergenic 55.0%
! AGCTTTTGTGGGCAGCTACC+TGG - chr3.4:97775308-97775327 MS.gene064746:CDS 55.0%
! GATAAACCCGAACCGGTTCC+CGG - chr3.4:97774164-97774183 MS.gene064746:CDS 55.0%
! GCTACTGGAGCACTTGTTGG+TGG - chr3.4:97776974-97776993 MS.gene064746:CDS 55.0%
!! ACCTGGCTCTACCATGCTAC+AGG - chr3.4:97775325-97775344 MS.gene064746:CDS 55.0%
GTTGCAAGGATGGGTGGCAG+TGG - chr3.4:97776921-97776940 MS.gene064746:CDS 60.0%
TCAATGGCACCAGGAGGACC+GGG + chr3.4:97774185-97774204 None:intergenic 60.0%
TCCGCCGAGGCTGTAATGTG+TGG - chr3.4:97775853-97775872 MS.gene064746:CDS 60.0%
AGGAGGACCGGGAACCGGTT+CGG + chr3.4:97774174-97774193 None:intergenic 65.0%
GCACCAGGAGGACCGGGAAC+CGG + chr3.4:97774179-97774198 None:intergenic 70.0%
! GAACCGGTTCCCGGTCCTCC+TGG - chr3.4:97774173-97774192 MS.gene064746:CDS 70.0%
! GGAGGACCGGGAACCGGTTC+GGG + chr3.4:97774173-97774192 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 97774041 97777135 97774041 ID=MS.gene064746
chr3.4 mRNA 97774041 97777135 97774041 ID=MS.gene064746.t1;Parent=MS.gene064746
chr3.4 exon 97776916 97777135 97776916 ID=MS.gene064746.t1.exon1;Parent=MS.gene064746.t1
chr3.4 CDS 97776916 97777135 97776916 ID=cds.MS.gene064746.t1;Parent=MS.gene064746.t1
chr3.4 exon 97776284 97776567 97776284 ID=MS.gene064746.t1.exon2;Parent=MS.gene064746.t1
chr3.4 CDS 97776284 97776567 97776284 ID=cds.MS.gene064746.t1;Parent=MS.gene064746.t1
chr3.4 exon 97775723 97776160 97775723 ID=MS.gene064746.t1.exon3;Parent=MS.gene064746.t1
chr3.4 CDS 97775723 97776160 97775723 ID=cds.MS.gene064746.t1;Parent=MS.gene064746.t1
chr3.4 exon 97775257 97775404 97775257 ID=MS.gene064746.t1.exon4;Parent=MS.gene064746.t1
chr3.4 CDS 97775257 97775404 97775257 ID=cds.MS.gene064746.t1;Parent=MS.gene064746.t1
chr3.4 exon 97774763 97774929 97774763 ID=MS.gene064746.t1.exon5;Parent=MS.gene064746.t1
chr3.4 CDS 97774763 97774929 97774763 ID=cds.MS.gene064746.t1;Parent=MS.gene064746.t1
chr3.4 exon 97774041 97774373 97774041 ID=MS.gene064746.t1.exon6;Parent=MS.gene064746.t1
chr3.4 CDS 97774041 97774373 97774041 ID=cds.MS.gene064746.t1;Parent=MS.gene064746.t1
Gene Sequence

>MS.gene064746

ATGAGAGAAAAATCGAGATCAAAAGGAGGATGTTGTGGTTGGTTTATTGCGTTTGTGATTCTGGCTCTTGTGGTCGGTGCTATTGTTTATGCTGTTAAGAAGAAAATCGATAACTCAAATTCAGATAAACCCGAACCGGTTCCCGGTCCTCCTGGTGCCATTGATCAAAAATATGCTTCTGCTCTCAAAACTGCAATGCAATTCTTCGACGTGCAAAAATGTAATAATCCTTTTTTTCATTCTCGGTTACCTTTATTTCTTGCATTTCACAATGTGGTTGGTTTATTATAGGAAGATATTAGATAGTTATTTATTATTATTATTGCATTGATGTTTTTTCGCGTAATGTTTTAAAAACCGAACTGGATATTGAATCGGCAAGATCTCTGGATCATGGTTCAACTGCCAAACTGCGATGAAACCACGATTGAGCCGCCTAAATAACCCACCAAAGTATTTGAACCGTAGCATGTGATTTGATTTGGTTTTGAAAACATTGTTTTGGCATGTCAATGTTGCTGCCCATTCTAGTTGGTTAACGGTCATGTTTGTTATTCATGTGATGCAGCTGGCAAGTTAGAGAACAACAAAATAAGTTGGAGAGGGGATTCGGCTCTTAAGGATGGAAAGCAAGCAGATTTAGATCTAACAAAAGGAATGTATGATGCCGGGGATCACATGAAGTTTGGTTTTCCTATGGCTTTTACTGCCTCAGTGCTATCGTGGGCAATTCTAGAATATGGAGATCAAATGGATGCTGTTGGCCAATTGGAACCAGCACAAGATTCTCTCAGGTGGATCACTGATTTTCTCGTCAATGCTCATCCTTCGGAGAATGTTCTGTATATTCAGGTTAGTTGGTCTGAAAACACAAACTGTTAAGCTGACAGTTGATCAAATGTAAAATATAACTACATTGATGTTTTTCTAGAATTTGTTTCTATCTAGTTTCATTTATCAAAATCGATGTGGCAGGTTGGTGATCCTGTTGCAGATCACAAGTGTTGGAATAGACCTGAGTTAATTACTGAGGAACGACCCCTCTTACAAGTGAACGTATCCTGTCCCGGATCAGATGTTGCAGCTGAAACTGCAGCAGCAATGGCATCAGCATCTTTGGTCTTCAAAAAGTCAGATGCTACATATTCAAGCACTCTCCTCAAGCATGCAAAACAGTTATTTACTTTTGCGGACAAGCATAGAGGAATTTACAGTGAGAATATACCTGAAGTTGCGACATATTATAACTCAACTGGATATGGGGATGAGCTTTTGTGGGCAGCTACCTGGCTCTACCATGCTACAGGTGATGATTCCTACCTTCAGTATGTGACTGGCCAAAATGGAGAAGATTATGCTCAATTTGGAAGCCCAACCTGGTTCAGTTGGGACAACAAGCTTGCCGGAACTCAGGTATGAAGAGCTGCCGAATCTTGTTTCCAAATTCTAAACTAGGATCATTTTATAGCTGAAGGCAATCATTAGTTATACTAACGTTGTTTGCTACCGAAGTGTTTTTTTTTATATATATTTTATTGCAACCTACACATTACATAGAATAGACTCAATCAAGCCTTATGGCATTATCTTATCCTAAATGATACTTCTACTTATTTTATTACAAACTTTGCAATGCTTTCATGTATATACTAGGGGATACTTCTACTTATCTTAGATGTTACATCTACTTACTTTATTACAAAGCTTTAATAATCCTTCTTCTTAATGCAGGTTTTGTTATCTAGAGTAAGCTTCTTCAAGGCAAAGGGCCTTTCAAGTTCATATGGTTCCGGCCTCCAAAATTATAGAAAATCCGCCGAGGCTGTAATGTGTGGTCTTCTTCCAGACTCTCCAACAGCCACAAAAAGCAGAACTGATAGTAATGTTCTCCTTGAATGCTATCTGACTTGATATTAACTAATGGGAAATGCTAATGAGTGCCCCCGGGGCACTTTTTATGAAAATTTGTGTATTCAATGCATTGGAAATTGAAGTATTTGAATTTTTTAAATAATAATTTCTTAATTTAGAATCCTTAAAGAGTGTCACGATCGTTAGCAAGACCCTTAACTTATAATCTGATTAGCATGCTGAATAGTTTTATTAGATAGTCTGGAGGAACACAAACTATGGAAATTCCATTTTTAGTAATATATTTCTACTGCAATACGTTGTCTAATTACATTTTTCTTTTTCTTTTATATAGATGGTCTGATATGGGTGAGTGAATGGAACGCTTTGCAGCATCCTGTTGCATCTGCATTCTTAGCTTCTGTTTACAGTGACTATATGCTTACAACGCAGACTCCCAATATAAAATGTGATTCAGATTCCTTCAAACCATCAGATCTTCGAGACTTTGCCAGATCTCAGGTATGCATTCATTATTATTTTTGTAGAATACTCTCTCTGGCCCTTAATATAAGAAGAATTTACCAAAATCACAGATCAAGGAGTTGTATTTTTTTTTTTGGTACAGATCAAGGAGCTTATTTAATTAGTATAAAATTGAGTGGTTATTGTTCCAATTAAACCAATAACATTAAATGTTTTATACCTACATGTAAATTTATACTAAACATTTATCTGACATTAAATAAAGGGTGTAAAAAGCATTTTAGCAATTAATGCACATTGAAATGAATTTCTTTTTCTTATAATAAAGACCAAAAAATACGCACAATTTCTTATAATAGGGATCAGAGATAGTATCGGCTTGAAATTATCTGCAACTAACTTGAAAACTTGTCTAATACTTCCAGGCTGATTACGTGTTGGGCAAGAATCCTCAGCATATGAGTTTTCTGGTGGGATATGGAAAGAATTTCCCACAATTTGTGCATCACAGAGGAGCTTCAATTCCTGCTAATGCAAAAACTGGTTGCAAGGATGGGTGGCAGTGGCTTGACTCATCCGATCCGAATCCCAATGTAGCTACTGGAGCACTTGTTGGTGGACCTTTCTTAAATGAGACTTACATTGATTCTAGGAACAATTCTATGCAAGGAGAACCAAGCACATATAACAGTGCTGTCATAGTTGGTCTCTTATCAAGTTTAGTCACCACATCTTCGGCCCTTCAATCCTTCTCCTAA
Protein sequence

>MS.gene064746.t1

MREKSRSKGGCCGWFIAFVILALVVGAIVYAVKKKIDNSNSDKPEPVPGPPGAIDQKYASALKTAMQFFDVQKSGKLENNKISWRGDSALKDGKQADLDLTKGMYDAGDHMKFGFPMAFTASVLSWAILEYGDQMDAVGQLEPAQDSLRWITDFLVNAHPSENVLYIQVGDPVADHKCWNRPELITEERPLLQVNVSCPGSDVAAETAAAMASASLVFKKSDATYSSTLLKHAKQLFTFADKHRGIYSENIPEVATYYNSTGYGDELLWAATWLYHATGDDSYLQYVTGQNGEDYAQFGSPTWFSWDNKLAGTQVLLSRVSFFKAKGLSSSYGSGLQNYRKSAEAVMCGLLPDSPTATKSRTDNGLIWVSEWNALQHPVASAFLASVYSDYMLTTQTPNIKCDSDSFKPSDLRDFARSQADYVLGKNPQHMSFLVGYGKNFPQFVHHRGASIPANAKTGCKDGWQWLDSSDPNPNVATGALVGGPFLNETYIDSRNNSMQGEPSTYNSAVIVGLLSSLVTTSSALQSFS