AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene01635

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene01635.t1 MTR_2g007780 98.895 181 2 0 1 181 48 228 2.03e-131 367
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene01635.t1 AT1G25260 70.175 171 50 1 1 171 48 217 2.47e-84 248

Find 37 sgRNAs with CRISPR-Local

Find 158 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCGAAATTGAAAGAGTTT+AGG 0.242754 2.2:+72297460 MS.gene01635:CDS
CTTTGAAACTTTGTGAAGAT+TGG 0.248050 2.2:-72297574 None:intergenic
TTCGAAATTGAAAGAGTTTA+GGG 0.248422 2.2:+72297461 MS.gene01635:CDS
AGAGCAGTTCACACATGATA+TGG 0.322264 2.2:+72298976 MS.gene01635:CDS
GACTGAACCTGGTTTGTAGA+TGG 0.358071 2.2:+72299971 MS.gene01635:CDS
TTTGAAACTTTGTGAAGATT+GGG 0.382034 2.2:-72297573 None:intergenic
ACCTGAAGCATCTCGTATAC+TGG 0.389289 2.2:+72299187 MS.gene01635:CDS
GAACAGGCATGCCTTGCTTC+CGG 0.401326 2.2:-72299009 None:intergenic
AAAGTAATGCAAGTTGCTAT+TGG 0.403753 2.2:+72297525 MS.gene01635:CDS
CAGCTATTGCGTGGAGATGC+TGG 0.406333 2.2:+72298197 MS.gene01635:intron
GTACCTTTATTTAACCGAAC+AGG 0.425105 2.2:-72299025 None:intergenic
ATGCCTGTTCGGTTAAATAA+AGG 0.445190 2.2:+72299022 MS.gene01635:CDS
ACTGAACCTGGTTTGTAGAT+GGG 0.448280 2.2:+72299972 MS.gene01635:CDS
TAGGCTGTTTAATGAATTTG+AGG 0.448398 2.2:+72298566 MS.gene01635:intron
ACCAGTATACGAGATGCTTC+AGG 0.450575 2.2:-72299188 None:intergenic
TCCAAAATTCACAGGTGTTG+TGG 0.453240 2.2:+72299118 MS.gene01635:intron
GGAAGCAAGGCATGCCTGTT+CGG 0.453618 2.2:+72299011 MS.gene01635:CDS
TCATGTGTGAACTGCTCTAA+AGG 0.461609 2.2:-72298971 None:intergenic
ATGCCTTGCTTCCGGAGAAA+AGG 0.467064 2.2:-72299001 None:intergenic
GGATGCGACTTTGCAAGAAC+AGG 0.475150 2.2:+72298588 MS.gene01635:CDS
CAATCTTCACAAAGTTTCAA+AGG 0.483461 2.2:+72297575 MS.gene01635:CDS
GACTTTGTTGTTTGTGAGGA+GGG 0.491569 2.2:+72299152 MS.gene01635:CDS
GGCTACGTTTCGACTGAACC+TGG 0.495680 2.2:+72299960 MS.gene01635:CDS
GAACTCTACATTGATGGGCC+TGG 0.523108 2.2:+72300012 MS.gene01635:CDS
AGGCTGTTTAATGAATTTGA+GGG 0.523767 2.2:+72298567 MS.gene01635:intron
CTGAACCTGGTTTGTAGATG+GGG 0.535144 2.2:+72299973 MS.gene01635:CDS
CATTCAACATCTGAATCGCC+AGG 0.535824 2.2:-72300030 None:intergenic
ACTGTTTCAGGTTGAACTCA+AGG 0.537015 2.2:+72298943 MS.gene01635:intron
GCGTTTGATGGGAAATATGA+TGG 0.540790 2.2:+72299939 MS.gene01635:intron
TTCTGACTTTGTTGTTTGTG+AGG 0.545701 2.2:+72299148 MS.gene01635:CDS
TGACTTTGTTGTTTGTGAGG+AGG 0.559551 2.2:+72299151 MS.gene01635:CDS
TGTCTAAAGAAGAAGTTGAA+AGG 0.565730 2.2:+72298237 MS.gene01635:CDS
CAGAACCCCATCTACAAACC+AGG 0.589817 2.2:-72299978 None:intergenic
CGAGATGCTTCAGGTGACAA+AGG 0.595978 2.2:-72299179 None:intergenic
GGTTTGTAGATGGGGTTCTG+AGG 0.610326 2.2:+72299981 MS.gene01635:CDS
TTTCAGGTTGAACTCAAGGA+GGG 0.645581 2.2:+72298947 MS.gene01635:intron
GTTTCAGGTTGAACTCAAGG+AGG 0.696156 2.2:+72298946 MS.gene01635:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAAAATGAAAGATATA+GGG - chr2.2:72299484-72299503 None:intergenic 10.0%
!! TATATAAAAATGAAAGATAT+AGG - chr2.2:72299485-72299504 None:intergenic 10.0%
!! AAAAAAAAAATCAAACCAAA+CGG - chr2.2:72297802-72297821 None:intergenic 15.0%
!! AACTAAAAAGTAATTAATGA+TGG - chr2.2:72299628-72299647 None:intergenic 15.0%
!! ATATTCATAAAAAATGTAAG+AGG - chr2.2:72298148-72298167 None:intergenic 15.0%
!!! TTTGTTTTATTTTTTTGTTG+TGG + chr2.2:72297627-72297646 MS.gene01635:intron 15.0%
!!! TTTTTATTGATGCTATTTAT+AGG + chr2.2:72298547-72298566 MS.gene01635:intron 15.0%
!! AAAAAGTAATTAATGATGGT+GGG - chr2.2:72299624-72299643 None:intergenic 20.0%
!! AAATAGCATCAATAAAAATC+AGG - chr2.2:72298545-72298564 None:intergenic 20.0%
!! ATTAATTACTTCAATAACCA+AGG - chr2.2:72299811-72299830 None:intergenic 20.0%
!! CAAATTTAATGCACAATTAT+TGG + chr2.2:72298304-72298323 MS.gene01635:intron 20.0%
!! GAAATTAGTAACACTAAATA+TGG - chr2.2:72299381-72299400 None:intergenic 20.0%
!! TAAAAAGTAATTAATGATGG+TGG - chr2.2:72299625-72299644 None:intergenic 20.0%
!! TGATGTACATACTATAATAA+TGG - chr2.2:72299878-72299897 None:intergenic 20.0%
!! TTACTATTGAGAATTTAACA+AGG - chr2.2:72299768-72299787 None:intergenic 20.0%
!!! AATTTTGCTTGAATAAACAT+TGG + chr2.2:72298440-72298459 MS.gene01635:intron 20.0%
!!! ATGCAAATAAATAAGCTTTT+AGG + chr2.2:72297847-72297866 MS.gene01635:intron 20.0%
!!! ATGTGATTTTGATTAGTTTT+TGG + chr2.2:72297659-72297678 MS.gene01635:intron 20.0%
!!! TATTTAGTGTTACTAATTTC+AGG + chr2.2:72299381-72299400 MS.gene01635:intron 20.0%
!!! TCATTTGAAAAGTTGTTTTT+CGG - chr2.2:72298015-72298034 None:intergenic 20.0%
!!! TCATTTTCTTAAATCATTAC+CGG - chr2.2:72298747-72298766 None:intergenic 20.0%
!!! TTGAAGTAATTAATTAGTCT+CGG + chr2.2:72299817-72299836 MS.gene01635:intron 20.0%
!!! TTTTTGAAAATCTGTAACAA+AGG + chr2.2:72298050-72298069 MS.gene01635:intron 20.0%
! AGCTAAAATTGTATCTTCAT+CGG + chr2.2:72297890-72297909 MS.gene01635:intron 25.0%
! ATTATAGGTTTCTACTAACA+AGG - chr2.2:72298684-72298703 None:intergenic 25.0%
! ATTCGAAATTGAAAGAGTTT+AGG + chr2.2:72297460-72297479 MS.gene01635:CDS 25.0%
! CAAACAAGAAAAAATCAATG+GGG - chr2.2:72299533-72299552 None:intergenic 25.0%
! CCAAACAAGAAAAAATCAAT+GGG - chr2.2:72299534-72299553 None:intergenic 25.0%
! CTGATATTGTAAGTTCTATT+GGG - chr2.2:72299275-72299294 None:intergenic 25.0%
! GAAATGGAGAGAATAATAAA+TGG + chr2.2:72299687-72299706 MS.gene01635:intron 25.0%
! TAAAAATGAAAGATATAGGG+AGG - chr2.2:72299481-72299500 None:intergenic 25.0%
! TATAGTAGCTGATATTCAAT+TGG + chr2.2:72298372-72298391 MS.gene01635:intron 25.0%
! TATTATTGATAAGCTTGTCA+AGG - chr2.2:72297938-72297957 None:intergenic 25.0%
! TTCGAAATTGAAAGAGTTTA+GGG + chr2.2:72297461-72297480 MS.gene01635:CDS 25.0%
!! ACTCATTCAATTAAAAGTGT+TGG + chr2.2:72298815-72298834 MS.gene01635:intron 25.0%
!! ATTTTGAACTCTACATTGAT+GGG + chr2.2:72300007-72300026 MS.gene01635:CDS 25.0%
!! CTGATATTCAATTGGTAATT+TGG + chr2.2:72298380-72298399 MS.gene01635:intron 25.0%
!! TATAATAATGGTGCTAATTG+AGG - chr2.2:72299866-72299885 None:intergenic 25.0%
!! TTTGAAACTTTGTGAAGATT+GGG - chr2.2:72297576-72297595 None:intergenic 25.0%
!!! ATCGTTAACCTTTTTCAATA+GGG + chr2.2:72298463-72298482 MS.gene01635:intron 25.0%
!!! CATTTGAAAAGTTGTTTTTC+GGG - chr2.2:72298014-72298033 None:intergenic 25.0%
!!! CCATTGATTTTTTCTTGTTT+GGG + chr2.2:72299532-72299551 MS.gene01635:intron 25.0%
!!! GTCAATTATTAGTCTTCAAT+TGG - chr2.2:72299095-72299114 None:intergenic 25.0%
!!! TTGGAGATTTTTAAGAAAAG+CGG + chr2.2:72297678-72297697 MS.gene01635:intron 25.0%
AAAGTAATGCAAGTTGCTAT+TGG + chr2.2:72297525-72297544 MS.gene01635:CDS 30.0%
ACAAAATAAGCCAATCCAAA+CGG + chr2.2:72297987-72298006 MS.gene01635:intron 30.0%
ACATCATCAACGTTATAATG+TGG + chr2.2:72299892-72299911 MS.gene01635:intron 30.0%
AGGCTGTTTAATGAATTTGA+GGG + chr2.2:72298567-72298586 MS.gene01635:intron 30.0%
CAATCTTCACAAAGTTTCAA+AGG + chr2.2:72297575-72297594 MS.gene01635:CDS 30.0%
CATCAATAAAAATCAGGTTC+TGG - chr2.2:72298539-72298558 None:intergenic 30.0%
CCAATAGAACTTACAATATC+AGG + chr2.2:72299273-72299292 MS.gene01635:intron 30.0%
CCCAAACAAGAAAAAATCAA+TGG - chr2.2:72299535-72299554 None:intergenic 30.0%
CCTGATATTGTAAGTTCTAT+TGG - chr2.2:72299276-72299295 None:intergenic 30.0%
GATATGCTAAACATGTTTCT+GGG + chr2.2:72298412-72298431 MS.gene01635:intron 30.0%
GGATAATGTGAACAATCAAA+TGG - chr2.2:72299512-72299531 None:intergenic 30.0%
TAGGCTGTTTAATGAATTTG+AGG + chr2.2:72298566-72298585 MS.gene01635:intron 30.0%
TGACACATAAAATAGACAGT+GGG + chr2.2:72299580-72299599 MS.gene01635:intron 30.0%
TGATATGCTAAACATGTTTC+TGG + chr2.2:72298411-72298430 MS.gene01635:intron 30.0%
TGTCTAAAGAAGAAGTTGAA+AGG + chr2.2:72298237-72298256 MS.gene01635:CDS 30.0%
TTGAATGAAATCACACATGT+CGG + chr2.2:72298772-72298791 MS.gene01635:intron 30.0%
TTGACACATAAAATAGACAG+TGG + chr2.2:72299579-72299598 MS.gene01635:intron 30.0%
! ATATGCTAAACATGTTTCTG+GGG + chr2.2:72298413-72298432 MS.gene01635:intron 30.0%
! GATTTTGAACTCTACATTGA+TGG + chr2.2:72300006-72300025 MS.gene01635:CDS 30.0%
!! ATTATTAGTCTTCAATTGGC+AGG - chr2.2:72299091-72299110 None:intergenic 30.0%
!! ATTTTCTGAGAAGCTACTAA+TGG + chr2.2:72297775-72297794 MS.gene01635:intron 30.0%
!! CTTTGAAACTTTGTGAAGAT+TGG - chr2.2:72297577-72297596 None:intergenic 30.0%
!! CTTTTAATTGAATGAGTGTC+TGG - chr2.2:72298812-72298831 None:intergenic 30.0%
!! TTTTCTGAGAAGCTACTAAT+GGG + chr2.2:72297776-72297795 MS.gene01635:intron 30.0%
!!! CCCATTGATTTTTTCTTGTT+TGG + chr2.2:72299531-72299550 MS.gene01635:intron 30.0%
!!! CTAGATTCAACCTACTTTTT+CGG - chr2.2:72298625-72298644 None:intergenic 30.0%
!!! GATCGTTAACCTTTTTCAAT+AGG + chr2.2:72298462-72298481 MS.gene01635:intron 30.0%
!!! TCAAGTAGCAAGTTTTTTCT+TGG + chr2.2:72297495-72297514 MS.gene01635:CDS 30.0%
!!! TCGTTAACCTTTTTCAATAG+GGG + chr2.2:72298464-72298483 MS.gene01635:intron 30.0%
!!! TGATTTTTTCTTGTTTGGGT+GGG + chr2.2:72299536-72299555 MS.gene01635:intron 30.0%
!!! TTGATTTTTTCTTGTTTGGG+TGG + chr2.2:72299535-72299554 MS.gene01635:intron 30.0%
AATAACCAAGGTCAAGATGT+TGG - chr2.2:72299799-72299818 None:intergenic 35.0%
AATAACTACTTCCTGCCTAT+GGG + chr2.2:72299347-72299366 MS.gene01635:intron 35.0%
AATATGGTCGAATAACCCAT+AGG - chr2.2:72299365-72299384 None:intergenic 35.0%
ATAGGCAGGAAGTAGTTATT+AGG - chr2.2:72299347-72299366 None:intergenic 35.0%
ATCTCTCCAAATGGATGAAA+TGG + chr2.2:72299671-72299690 MS.gene01635:intron 35.0%
ATGCCTGTTCGGTTAAATAA+AGG + chr2.2:72299022-72299041 MS.gene01635:CDS 35.0%
CAAAATAAGCCAATCCAAAC+GGG + chr2.2:72297988-72298007 MS.gene01635:intron 35.0%
GGAGAGAATAATAAATGGAG+AGG + chr2.2:72299692-72299711 MS.gene01635:intron 35.0%
TAATAACTACTTCCTGCCTA+TGG + chr2.2:72299346-72299365 MS.gene01635:intron 35.0%
TGTGTCTATATCTCTCCAAA+TGG + chr2.2:72299662-72299681 MS.gene01635:intron 35.0%
TTCTCTCCATTTCATCCATT+TGG - chr2.2:72299680-72299699 None:intergenic 35.0%
TTGACGTTTCCAAAATTCAC+AGG + chr2.2:72299110-72299129 MS.gene01635:intron 35.0%
TTTCAAGATCTGACTGTTTC+AGG + chr2.2:72298931-72298950 MS.gene01635:intron 35.0%
! ATGATATGGAACCTTTTCTC+CGG + chr2.2:72298990-72299009 MS.gene01635:CDS 35.0%
! GTACCTTTATTTAACCGAAC+AGG - chr2.2:72299028-72299047 None:intergenic 35.0%
!! TAAAAGTGTTGGTGCTACAA+AGG + chr2.2:72298826-72298845 MS.gene01635:intron 35.0%
!! TTCTGACTTTGTTGTTTGTG+AGG + chr2.2:72299148-72299167 MS.gene01635:CDS 35.0%
!!! CGTTAACCTTTTTCAATAGG+GGG + chr2.2:72298465-72298484 MS.gene01635:intron 35.0%
!!! GTTAACCTTTTTCAATAGGG+GGG + chr2.2:72298466-72298485 MS.gene01635:intron 35.0%
AAGATAGAACGAAGTGGAGT+AGG + chr2.2:72299407-72299426 MS.gene01635:intron 40.0%
ACTCCACTTCGTTCTATCTT+TGG - chr2.2:72299407-72299426 None:intergenic 40.0%
AGAGCAGTTCACACATGATA+TGG + chr2.2:72298976-72298995 MS.gene01635:CDS 40.0%
AGTGGGTCCTACTATTATGT+GGG + chr2.2:72299597-72299616 MS.gene01635:intron 40.0%
AGTTGAAGTTGCACTACTCT+AGG + chr2.2:72299304-72299323 MS.gene01635:intron 40.0%
GAAAACCCCCCTATTGAAAA+AGG - chr2.2:72298474-72298493 None:intergenic 40.0%
GCGTTTGATGGGAAATATGA+TGG + chr2.2:72299939-72299958 MS.gene01635:intron 40.0%
GTTGAAGTTGCACTACTCTA+GGG + chr2.2:72299305-72299324 MS.gene01635:intron 40.0%
TCATGTGTGAACTGCTCTAA+AGG - chr2.2:72298974-72298993 None:intergenic 40.0%
TCTATCCAACATCTTGACCT+TGG + chr2.2:72299791-72299810 MS.gene01635:intron 40.0%
TGTCTGTGTAGGTGCATTAT+AGG - chr2.2:72298699-72298718 None:intergenic 40.0%
! ACTGAACCTGGTTTGTAGAT+GGG + chr2.2:72299972-72299991 MS.gene01635:CDS 40.0%
! TCCAAAATTCACAGGTGTTG+TGG + chr2.2:72299118-72299137 MS.gene01635:intron 40.0%
! TCCACAACACCTGTGAATTT+TGG - chr2.2:72299122-72299141 None:intergenic 40.0%
! TGCTTTTGACAGCGTTTGAT+GGG + chr2.2:72299928-72299947 MS.gene01635:intron 40.0%
!! ACTGTTTCAGGTTGAACTCA+AGG + chr2.2:72298943-72298962 MS.gene01635:intron 40.0%
!! GACTTTGTTGTTTGTGAGGA+GGG + chr2.2:72299152-72299171 MS.gene01635:CDS 40.0%
!! GTTTTGTTACAGCTATTGCG+TGG + chr2.2:72298188-72298207 MS.gene01635:intron 40.0%
!! TCGACATGTCAGTGTTGTTT+CGG - chr2.2:72298722-72298741 None:intergenic 40.0%
!! TGACTTTGTTGTTTGTGAGG+AGG + chr2.2:72299151-72299170 MS.gene01635:CDS 40.0%
!! TTTCAGGTTGAACTCAAGGA+GGG + chr2.2:72298947-72298966 MS.gene01635:intron 40.0%
!!! GATTCAACCTACTTTTTCGG+TGG - chr2.2:72298622-72298641 None:intergenic 40.0%
!!! TTTTTTCTTGTTTGGGTGGG+TGG + chr2.2:72299539-72299558 MS.gene01635:intron 40.0%
ACCAGTATACGAGATGCTTC+AGG - chr2.2:72299191-72299210 None:intergenic 45.0%
AGCATTGCCACCGAAAAAGT+AGG + chr2.2:72298612-72298631 MS.gene01635:intron 45.0%
AGGCCAAAGATAGAACGAAG+TGG + chr2.2:72299401-72299420 MS.gene01635:intron 45.0%
ATAGCACAGAGCAGAGGATT+TGG - chr2.2:72299230-72299249 None:intergenic 45.0%
ATGGAGAGGATCTTAACTCG+TGG + chr2.2:72299706-72299725 MS.gene01635:intron 45.0%
CAGTGGGTCCTACTATTATG+TGG + chr2.2:72299596-72299615 MS.gene01635:intron 45.0%
CATTCAACATCTGAATCGCC+AGG - chr2.2:72300033-72300052 None:intergenic 45.0%
GAGCAACTACAGGATATGTC+AGG - chr2.2:72298867-72298886 None:intergenic 45.0%
TAGCACAGAGCAGAGGATTT+GGG - chr2.2:72299229-72299248 None:intergenic 45.0%
TGGAGAGGATCTTAACTCGT+GGG + chr2.2:72299707-72299726 MS.gene01635:intron 45.0%
! ACCTGAAGCATCTCGTATAC+TGG + chr2.2:72299187-72299206 MS.gene01635:CDS 45.0%
! CTGAACCTGGTTTGTAGATG+GGG + chr2.2:72299973-72299992 MS.gene01635:CDS 45.0%
! GACTGAACCTGGTTTGTAGA+TGG + chr2.2:72299971-72299990 MS.gene01635:CDS 45.0%
! TGTGCTGGCGAACATAAATG+TGG + chr2.2:72299249-72299268 MS.gene01635:intron 45.0%
!! CTGCTTTTGACAGCGTTTGA+TGG + chr2.2:72299927-72299946 MS.gene01635:intron 45.0%
!! GTTTCAGGTTGAACTCAAGG+AGG + chr2.2:72298946-72298965 MS.gene01635:intron 45.0%
!! TGTTGTTTCGGTGTCTGTGT+AGG - chr2.2:72298710-72298729 None:intergenic 45.0%
ATGCCTTGCTTCCGGAGAAA+AGG - chr2.2:72299004-72299023 None:intergenic 50.0%
CAACACTGACATGTCGACAC+CGG + chr2.2:72298725-72298744 MS.gene01635:intron 50.0%
CAGAACCCCATCTACAAACC+AGG - chr2.2:72299981-72300000 None:intergenic 50.0%
CCAGATGCATGAGCAACTAC+AGG - chr2.2:72298877-72298896 None:intergenic 50.0%
CCTGTAGTTGCTCATGCATC+TGG + chr2.2:72298874-72298893 MS.gene01635:intron 50.0%
CGAGATGCTTCAGGTGACAA+AGG - chr2.2:72299182-72299201 None:intergenic 50.0%
GAGAGGATCTTAACTCGTGG+GGG + chr2.2:72299709-72299728 MS.gene01635:intron 50.0%
GGAGAGGATCTTAACTCGTG+GGG + chr2.2:72299708-72299727 MS.gene01635:intron 50.0%
GGATGCGACTTTGCAAGAAC+AGG + chr2.2:72298588-72298607 MS.gene01635:CDS 50.0%
GGTGGGACCCACATAATAGT+AGG - chr2.2:72299607-72299626 None:intergenic 50.0%
GGTTTGTAGATGGGGTTCTG+AGG + chr2.2:72299981-72300000 MS.gene01635:CDS 50.0%
TGGTCGAATAACCCATAGGC+AGG - chr2.2:72299361-72299380 None:intergenic 50.0%
TTTGGGTGGGTGGTGCAATT+TGG + chr2.2:72299549-72299568 MS.gene01635:intron 50.0%
! GAACCTTTTCTCCGGAAGCA+AGG + chr2.2:72298998-72299017 MS.gene01635:CDS 50.0%
! GAACTCTACATTGATGGGCC+TGG + chr2.2:72300012-72300031 MS.gene01635:CDS 50.0%
! GAAGCTACTAATGGGCCGTT+TGG + chr2.2:72297784-72297803 MS.gene01635:intron 50.0%
!!! AGTTGTTTTTCGGGCCCGTT+TGG - chr2.2:72298005-72298024 None:intergenic 50.0%
!!! TTTTTCGGGCCCGTTTGGAT+TGG - chr2.2:72298000-72298019 None:intergenic 50.0%
CAGCACATAGCACAGAGCAG+AGG - chr2.2:72299236-72299255 None:intergenic 55.0%
CAGCTATTGCGTGGAGATGC+TGG + chr2.2:72298197-72298216 MS.gene01635:intron 55.0%
CTCTGCTCTGTGCTATGTGC+TGG + chr2.2:72299234-72299253 MS.gene01635:intron 55.0%
GAACAGGCATGCCTTGCTTC+CGG - chr2.2:72299012-72299031 None:intergenic 55.0%
GGAAGCAAGGCATGCCTGTT+CGG + chr2.2:72299011-72299030 MS.gene01635:CDS 55.0%
GGCTACGTTTCGACTGAACC+TGG + chr2.2:72299960-72299979 MS.gene01635:CDS 55.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 72297453 72300053 72297453 ID=MS.gene01635
chr2.2 mRNA 72297453 72300053 72297453 ID=MS.gene01635.t1;Parent=MS.gene01635
chr2.2 exon 72297453 72297596 72297453 ID=MS.gene01635.t1.exon1;Parent=MS.gene01635.t1
chr2.2 CDS 72297453 72297596 72297453 ID=cds.MS.gene01635.t1;Parent=MS.gene01635.t1
chr2.2 exon 72298200 72298258 72298200 ID=MS.gene01635.t1.exon2;Parent=MS.gene01635.t1
chr2.2 CDS 72298200 72298258 72298200 ID=cds.MS.gene01635.t1;Parent=MS.gene01635.t1
chr2.2 exon 72298569 72298629 72298569 ID=MS.gene01635.t1.exon3;Parent=MS.gene01635.t1
chr2.2 CDS 72298569 72298629 72298569 ID=cds.MS.gene01635.t1;Parent=MS.gene01635.t1
chr2.2 exon 72298953 72299043 72298953 ID=MS.gene01635.t1.exon4;Parent=MS.gene01635.t1
chr2.2 CDS 72298953 72299043 72298953 ID=cds.MS.gene01635.t1;Parent=MS.gene01635.t1
chr2.2 exon 72299132 72299208 72299132 ID=MS.gene01635.t1.exon5;Parent=MS.gene01635.t1
chr2.2 CDS 72299132 72299208 72299132 ID=cds.MS.gene01635.t1;Parent=MS.gene01635.t1
chr2.2 exon 72299940 72300053 72299940 ID=MS.gene01635.t1.exon6;Parent=MS.gene01635.t1
chr2.2 CDS 72299940 72300053 72299940 ID=cds.MS.gene01635.t1;Parent=MS.gene01635.t1
Gene Sequence

>MS.gene01635

ATGAGAAATTCGAAATTGAAAGAGTTTAGGGAACAATTACAATCAAGTAGCAAGTTTTTTCTTGGATCTAACAAAGTAATGCAAGTTGCTATTGGTCGTTCTGCTTCTGATGAAATCAAACCCAATCTTCACAAAGTTTCAAAGGTTGTTTTGTCTTGCAATATCGTTCTGTTTTTTGTTTTATTTTTTTGTTGTGGATTAGAAAAATGTGATTTTGATTAGTTTTTGGAGATTTTTAAGAAAAGCGGAAGCTGCTTTGTGTTATTTTACTTGAATGATAATCATTTTGCGTTTTTCTGTTGTAAAATTAGTTCTGAAAATGATTTTCTGAGAAGCTACTAATGGGCCGTTTGGTTTGATTTTTTTTTTTTTTAATCTTATGAAAAAATAGCTTATGCAAATAAATAAGCTTTTAGGTTAATTCACGAGTTCTCACTAGCTAAAATTGTATCTTCATCGGTTTTTTTTTTTTTCATAAACTACCTTGACAAGCTTATCAATAATACATAAAAGCTTATTTATTTGCATAAGCTCACAAAATAAGCCAATCCAAACGGGCCCGAAAAACAACTTTTCAAATGAAGCAGTTTTTAGATTTTTTTGAAAATCTGTAACAAAGGATTCAAAACTAGTATAAGTGATTATTTTGTTTAAAAAAAGTGATTTTTTCATGAAAAAGTTGTAACAAACAGCCTCTTACATTTTTTATGAATATTTTCTTATTGTACTTTTTTTGTTTTGTTACAGCTATTGCGTGGAGATGCTGGAATGATTTTTACGAATTTGTCTAAAGAAGAAGTTGAAAGGTAATTGATTTTTGAACTGCAAGTTTAGTTATGCATAGAAATGAGCAAATTTAATGCACAATTATTGGTCTGTGCAGCATATATGTATGTGTTCTTTGTCTATGTAACTGTCTTATAGTAGCTGATATTCAATTGGTAATTTGGCATGCTATTGATATGCTAAACATGTTTCTGGGGTGAAAATTTTGCTTGAATAAACATTGGATCGTTAACCTTTTTCAATAGGGGGGTTTTCTTGAGATGCTTGAAATGTCTCATCTCATTGTTCTTTATTTGACCAGAACCTGATTTTTATTGATGCTATTTATAGGCTGTTTAATGAATTTGAGGGATGCGACTTTGCAAGAACAGGAAGCATTGCCACCGAAAAAGTAGGTTGAATCTAGTTCATTATTAACTTAATGTTTATTTTTATACAAATGCCTTGTTAGTAGAAACCTATAATGCACCTACACAGACACCGAAACAACACTGACATGTCGACACCGGTAATGATTTAAGAAAATGACATAATTGAATGAAATCACACATGTCGGTGTTATGTTCGATACCAGACACTCATTCAATTAAAAGTGTTGGTGCTACAAAGGCAGAAACTATTTCATCCTGACATATCCTGTAGTTGCTCATGCATCTGGCATGTGTTGAATATTTAGTAAATAAAACTCATACTTTCAAGATCTGACTGTTTCAGGTTGAACTCAAGGAGGGTCCTTTAGAGCAGTTCACACATGATATGGAACCTTTTCTCCGGAAGCAAGGCATGCCTGTTCGGTTAAATAAAGGTACACTATAGACTGCATTGTTTTGTAATTATTTTTTAAGTGAACCTGCCAATTGAAGACTAATAATTGACGTTTCCAAAATTCACAGGTGTTGTGGAGCTTGTTTCTGACTTTGTTGTTTGTGAGGAGGGAAAGCCTTTGTCACCTGAAGCATCTCGTATACTGGTTAGTTGTTGTTATTACCCAAATCCTCTGCTCTGTGCTATGTGCTGGCGAACATAAATGTGGCCCAATAGAACTTACAATATCAGGACTTCGAAAGTTGAAGTTGCACTACTCTAGGGATGACTCACACTTCAACCTAATAACTACTTCCTGCCTATGGGTTATTCGACCATATTTAGTGTTACTAATTTCAGGCCAAAGATAGAACGAAGTGGAGTAGGATGATTTTTTGATTGTGAGAACATTGAAAAATTTTAACATGATTTTTTCCTCCCTATATCTTTCATTTTTATATAGCGACCATTTGATTGTTCACATTATCCCCATTGATTTTTTCTTGTTTGGGTGGGTGGTGCAATTTGGAGAGAGATTGACACATAAAATAGACAGTGGGTCCTACTATTATGTGGGTCCCACCATCATTAATTACTTTTTAGTTTTTCGAAATTTTTGTGTGTCTATATCTCTCCAAATGGATGAAATGGAGAGAATAATAAATGGAGAGGATCTTAACTCGTGGGGGATGTGAATATAAAAATGATGCATATATTTGTTTCCTTGTTAAATTCTCAATAGTAATGTTCTATCCAACATCTTGACCTTGGTTATTGAAGTAATTAATTAGTCTCGGTTAGCAATAAGCATATAAGCTCACCTCAATTAGCACCATTATTATAGTATGTACATCATCAACGTTATAATGTGGCTGACATTGTTGCTGCTTTTGACAGCGTTTGATGGGAAATATGATGGCTACGTTTCGACTGAACCTGGTTTGTAGATGGGGTTCTGAGGATGATTTTGAACTCTACATTGATGGGCCTGGCGATTCAGATGTTGAATGA
Protein sequence

>MS.gene01635.t1

MRNSKLKEFREQLQSSSKFFLGSNKVMQVAIGRSASDEIKPNLHKVSKLLRGDAGMIFTNLSKEEVERLFNEFEGCDFARTGSIATEKVELKEGPLEQFTHDMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEASRILRLMGNMMATFRLNLVCRWGSEDDFELYIDGPGDSDVE