Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065146.t1 | XP_003592650.1 | 98.7 | 694 | 9 | 0 | 1 | 694 | 38 | 731 | 0.00E+00 | 1241.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065146.t1 | Q9ZPV5 | 68.9 | 559 | 171 | 2 | 22 | 577 | 72 | 630 | 7.5e-209 | 728.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065146.t1 | G7ID95 | 98.7 | 694 | 9 | 0 | 1 | 694 | 38 | 731 | 0.0e+00 | 1241.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065146.t1 | MTR_1g110560 | 98.703 | 694 | 9 | 0 | 1 | 694 | 38 | 731 | 0.0 | 1428 |
| MS.gene065146.t1 | MTR_6g033410 | 36.245 | 538 | 314 | 10 | 32 | 558 | 145 | 664 | 8.25e-102 | 327 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065146.t1 | AT2G18220 | 63.775 | 657 | 215 | 5 | 13 | 653 | 63 | 712 | 0.0 | 843 |
| MS.gene065146.t1 | AT3G55510 | 33.017 | 527 | 342 | 6 | 36 | 555 | 63 | 585 | 3.97e-95 | 306 |
| MS.gene065146.t1 | AT3G55510 | 33.268 | 511 | 330 | 6 | 56 | 559 | 8 | 514 | 3.73e-94 | 301 |
Find 131 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAGGTGTCTCTTCATTTC+TGG | 0.080261 | 1.2:-81879668 | MS.gene065146:intron |
| TGCATAGATGATTGCTTTAA+AGG | 0.165421 | 1.2:-81879570 | MS.gene065146:CDS |
| TGCAAATCAATTAAAGAAAA+TGG | 0.219753 | 1.2:-81880497 | MS.gene065146:CDS |
| AGAGCAATACTTGTCATTTC+CGG | 0.221748 | 1.2:+81877432 | None:intergenic |
| ACCAGTATCTATGCTCCTTT+TGG | 0.248004 | 1.2:-81878813 | MS.gene065146:CDS |
| TTGTTGAAGCTTCCTGCTTC+TGG | 0.303506 | 1.2:-81880308 | MS.gene065146:CDS |
| TCAGGTGTCTCTTCATTTCT+GGG | 0.315570 | 1.2:-81879667 | MS.gene065146:intron |
| GAGTTACTCTGTTGGGTTCA+TGG | 0.318367 | 1.2:-81878540 | MS.gene065146:CDS |
| TAAAGTTATAACCACTTCTA+TGG | 0.321812 | 1.2:-81880531 | MS.gene065146:CDS |
| AAAATATTCTTCATTGTTGT+TGG | 0.346316 | 1.2:-81880138 | MS.gene065146:CDS |
| TCTCTTCATTTCTGGGGTAC+TGG | 0.358919 | 1.2:-81879660 | MS.gene065146:CDS |
| AGTTCCATCCACGTTCTCTT+TGG | 0.366087 | 1.2:+81877480 | None:intergenic |
| TCATTAACTCTCTTGAGCTT+TGG | 0.367280 | 1.2:-81879009 | MS.gene065146:CDS |
| ACAAAACAATGGAGGACTTA+TGG | 0.369094 | 1.2:-81880251 | MS.gene065146:CDS |
| GATGATGCTGCAGGATCATT+AGG | 0.370236 | 1.2:+81878264 | None:intergenic |
| AGACAAAGCATAAAACAAAA+AGG | 0.374855 | 1.2:-81877084 | MS.gene065146:CDS |
| CTGTCCTAAAAGCCCTCATC+AGG | 0.374975 | 1.2:+81880453 | None:intergenic |
| GAGCAATACTTGTCATTTCC+GGG | 0.375130 | 1.2:+81877433 | None:intergenic |
| CACTGTGGAGTTACTCTGTT+GGG | 0.380617 | 1.2:-81878547 | MS.gene065146:CDS |
| CAAGGTAGGACTTCACAATA+TGG | 0.381844 | 1.2:+81880228 | None:intergenic |
| GTACCTTGATATATTTCCTT+AGG | 0.386131 | 1.2:+81880099 | None:intergenic |
| CTTTGCCAACGCCTCCTGTA+GGG | 0.389871 | 1.2:+81878759 | None:intergenic |
| CAGCTAGGTACTTTCCCCTT+AGG | 0.392908 | 1.2:-81878889 | MS.gene065146:CDS |
| CATTTCTGGGGTACTGGTGG+AGG | 0.417756 | 1.2:-81879654 | MS.gene065146:CDS |
| TCTTCGAAACCTTTCAACTT+TGG | 0.426560 | 1.2:+81878469 | None:intergenic |
| GTTTCACAGCATTTACGAAA+TGG | 0.429053 | 1.2:+81879520 | None:intergenic |
| GCAGAAGGGCTGTCGCTTGA+AGG | 0.432094 | 1.2:+81877157 | None:intergenic |
| AACTGCGTCATTGAACTTCT+CGG | 0.432785 | 1.2:-81879474 | MS.gene065146:CDS |
| TGGAGATGAAAGAGTTGAAT+AGG | 0.435893 | 1.2:-81878784 | MS.gene065146:CDS |
| GTTGACTGTACTTAATGAAA+TGG | 0.436589 | 1.2:-81880348 | MS.gene065146:CDS |
| GCAAATCAATTAAAGAAAAT+GGG | 0.446925 | 1.2:-81880496 | MS.gene065146:CDS |
| CCCTTAGGTTGAGATGTATC+CGG | 0.448152 | 1.2:-81878874 | MS.gene065146:CDS |
| TAGATACTGGTACAAAAGAA+TGG | 0.450220 | 1.2:+81878825 | None:intergenic |
| TTTAGGACAGCATGCCACTA+TGG | 0.450538 | 1.2:-81880440 | MS.gene065146:CDS |
| TCACTGAACTTAAGCAGATC+CGG | 0.454118 | 1.2:+81881686 | None:intergenic |
| TGATTTACGCAGCATATTGA+AGG | 0.459394 | 1.2:-81878732 | MS.gene065146:intron |
| TTGTGCATCTGTATTGGATC+TGG | 0.460491 | 1.2:-81879594 | MS.gene065146:CDS |
| CAGCAATCTGGTTCAACATC+CGG | 0.468912 | 1.2:+81878855 | None:intergenic |
| TCAAGCGACAGCCCTTCTGC+CGG | 0.472007 | 1.2:-81877154 | MS.gene065146:CDS |
| AGGAATAAATCTCACACCTA+AGG | 0.472641 | 1.2:-81877055 | None:intergenic |
| AAGTTGCGCAACCTCACAAT+TGG | 0.474304 | 1.2:+81878503 | None:intergenic |
| TCCAAAAGGAGCATAGATAC+TGG | 0.475479 | 1.2:+81878812 | None:intergenic |
| CTTGTCATTTCCGGGTAACC+AGG | 0.475649 | 1.2:+81877441 | None:intergenic |
| CCACTTCTATGGTTGATTTG+TGG | 0.479032 | 1.2:-81880520 | MS.gene065146:CDS |
| CTTCATTTCTGGGGTACTGG+TGG | 0.480769 | 1.2:-81879657 | MS.gene065146:CDS |
| TGCGGTTCGTTCCCTGATGA+GGG | 0.483874 | 1.2:-81880465 | MS.gene065146:CDS |
| ATGAATAGACACGAAACAAC+AGG | 0.485209 | 1.2:+81879624 | None:intergenic |
| TGCAGGATCATTAGGTAGAA+AGG | 0.489946 | 1.2:+81878272 | None:intergenic |
| AATGGGTAGAAGCAGCAATC+TGG | 0.490303 | 1.2:+81878843 | None:intergenic |
| TGATGATGTTGTGGAGGACT+TGG | 0.492880 | 1.2:-81877209 | MS.gene065146:CDS |
| TGGAAGAAAAGAGATCATAA+TGG | 0.493687 | 1.2:-81880285 | MS.gene065146:CDS |
| ATGCGGTTCGTTCCCTGATG+AGG | 0.495163 | 1.2:-81880466 | MS.gene065146:CDS |
| AAGTGCATCCCTTAAAATCA+TGG | 0.500234 | 1.2:+81879398 | None:intergenic |
| AGAGAGTTGTGCATCTGTAT+TGG | 0.501253 | 1.2:-81879600 | MS.gene065146:CDS |
| CAAGCGACAGCCCTTCTGCC+GGG | 0.504148 | 1.2:-81877153 | MS.gene065146:CDS |
| GCTCCTAAGGAAATATATCA+AGG | 0.505109 | 1.2:-81880102 | MS.gene065146:intron |
| TCCGGATACATCTCAACCTA+AGG | 0.506348 | 1.2:+81878873 | None:intergenic |
| CTGCTGCATTTAGCTCATCC+TGG | 0.510196 | 1.2:-81877459 | MS.gene065146:CDS |
| GCAAATTGACCAAAGTTGAA+AGG | 0.512230 | 1.2:-81878478 | MS.gene065146:CDS |
| ACGACTCATTAAAGGAATCC+AGG | 0.512258 | 1.2:-81877685 | MS.gene065146:intron |
| TTGAAGCTTCCTGCTTCTGG+TGG | 0.513192 | 1.2:-81880305 | MS.gene065146:CDS |
| CAACAGCCTACTGAACCAAA+AGG | 0.514963 | 1.2:-81877271 | MS.gene065146:CDS |
| TTTGCCAACGCCTCCTGTAG+GGG | 0.515868 | 1.2:+81878760 | None:intergenic |
| AGATACTGGTACAAAAGAAT+GGG | 0.517124 | 1.2:+81878826 | None:intergenic |
| GCTTTGCCAACGCCTCCTGT+AGG | 0.518176 | 1.2:+81878758 | None:intergenic |
| CTCCACAACATCATCATCAA+TGG | 0.522343 | 1.2:+81877216 | None:intergenic |
| TTCTGTGGTTGAAGAACTTG+CGG | 0.526193 | 1.2:-81878579 | MS.gene065146:CDS |
| GTGGATGATGACATGGAAGA+TGG | 0.527004 | 1.2:-81880620 | MS.gene065146:CDS |
| CAGAGTAACTCCACAGTGCT+AGG | 0.529878 | 1.2:+81878552 | None:intergenic |
| AATGCCCGTGTCTTAAGAGT+TGG | 0.530371 | 1.2:+81878620 | None:intergenic |
| GAAATGGCAATTCAAAACAT+AGG | 0.534559 | 1.2:+81879536 | None:intergenic |
| CAGTCATTTGATTCAAAATG+TGG | 0.535572 | 1.2:+81880195 | None:intergenic |
| GGAGGATACTAAAGAGAATG+AGG | 0.540305 | 1.2:-81877506 | MS.gene065146:CDS |
| TCAAGAAAAGATGATGCTGC+AGG | 0.543116 | 1.2:+81878255 | None:intergenic |
| CAGGTGTCTCTTCATTTCTG+GGG | 0.543367 | 1.2:-81879666 | MS.gene065146:CDS |
| CCTAGCTGTGGGAACTAGAC+GGG | 0.544301 | 1.2:+81878904 | None:intergenic |
| CTTTGCTTCAATCACAACCA+TGG | 0.546322 | 1.2:+81882367 | None:intergenic |
| GCACTGTGGAGTTACTCTGT+TGG | 0.548474 | 1.2:-81878548 | MS.gene065146:CDS |
| GATTGAAGCAAAGCAACATA+AGG | 0.549356 | 1.2:-81882357 | MS.gene065146:CDS |
| TTTAGCTCATCCTGGTTACC+CGG | 0.550270 | 1.2:-81877451 | MS.gene065146:CDS |
| ATATATTTCCTTAGGAGCGA+AGG | 0.556004 | 1.2:+81880107 | None:intergenic |
| TCTCATCATCATCACCATAG+TGG | 0.557196 | 1.2:+81880426 | None:intergenic |
| CACTGAACTTAAGCAGATCC+GGG | 0.560310 | 1.2:+81881687 | None:intergenic |
| TGATATCATTTACTTTACAT+CGG | 0.560340 | 1.2:-81880163 | MS.gene065146:CDS |
| TCATCTCCAGCATATCCAAA+AGG | 0.562573 | 1.2:+81878798 | None:intergenic |
| CCGGATACATCTCAACCTAA+GGG | 0.564014 | 1.2:+81878874 | None:intergenic |
| TTGCCAACGCCTCCTGTAGG+GGG | 0.565187 | 1.2:+81878761 | None:intergenic |
| CTACTGAACCAAAAGGAAAG+AGG | 0.572500 | 1.2:-81877264 | MS.gene065146:CDS |
| TGCCATTGATGATGATGTTG+TGG | 0.573586 | 1.2:-81877218 | MS.gene065146:CDS |
| GGAATAAATCTCACACCTAA+GGG | 0.576466 | 1.2:-81877054 | None:intergenic |
| GATGCCAAAGAGAACGTGGA+TGG | 0.579919 | 1.2:-81877484 | MS.gene065146:CDS |
| AAAGGTTTCGAAGAGAAATG+AGG | 0.583015 | 1.2:-81878460 | MS.gene065146:CDS |
| ACTGTACTTAATGAAATGGA+TGG | 0.588834 | 1.2:-81880344 | MS.gene065146:CDS |
| TAAGACACGGGCATTTCAAG+AGG | 0.589841 | 1.2:-81878612 | MS.gene065146:CDS |
| AAATGTGGAGAGCATTTCCA+AGG | 0.591878 | 1.2:+81880210 | None:intergenic |
| CATGGAAGATGGAGAACCAC+AGG | 0.594124 | 1.2:-81880609 | MS.gene065146:CDS |
| CATATTGTGAAGTCCTACCT+TGG | 0.595814 | 1.2:-81880227 | MS.gene065146:CDS |
| AAGGGGAAAGTACCTAGCTG+TGG | 0.600642 | 1.2:+81878892 | None:intergenic |
| CCACAAATCAACCATAGAAG+TGG | 0.600691 | 1.2:+81880520 | None:intergenic |
| TGAGAAGGCTATTGAGCATG+AGG | 0.603012 | 1.2:-81880582 | MS.gene065146:CDS |
| GTGGAGAGCATTTCCAAGGT+AGG | 0.605480 | 1.2:+81880214 | None:intergenic |
| TGAGCATGAGGTTCAAGCAA+AGG | 0.611999 | 1.2:-81880570 | MS.gene065146:CDS |
| AGAACCACAGGTAGATGAGA+AGG | 0.612954 | 1.2:-81880597 | MS.gene065146:CDS |
| ACCTAGCTGTGGGAACTAGA+CGG | 0.614017 | 1.2:+81878903 | None:intergenic |
| ATACTTTGATAGTGCACTAG+AGG | 0.618108 | 1.2:+81877742 | None:intergenic |
| ATAGCCTTCTCATCTACCTG+TGG | 0.620098 | 1.2:+81880593 | None:intergenic |
| AGAATCAGCAAGTGATGAGG+AGG | 0.621827 | 1.2:-81877524 | MS.gene065146:CDS |
| GCAAGCCAACTCTTAAGACA+CGG | 0.624117 | 1.2:-81878625 | MS.gene065146:CDS |
| CAACTGTCGAATGAAAATGA+AGG | 0.625145 | 1.2:+81879422 | None:intergenic |
| ATTTGATGACCACAAAACAA+TGG | 0.630871 | 1.2:-81880262 | MS.gene065146:CDS |
| TGAAGAATCAGCAAGTGATG+AGG | 0.631498 | 1.2:-81877527 | MS.gene065146:CDS |
| CGTCATTGAACTTCTCGGAG+TGG | 0.634980 | 1.2:-81879469 | MS.gene065146:CDS |
| AGGGGAAAGTACCTAGCTGT+GGG | 0.635817 | 1.2:+81878893 | None:intergenic |
| CCCGTCTAGTTCCCACAGCT+AGG | 0.637534 | 1.2:-81878904 | MS.gene065146:CDS |
| AAGGCGTGTTGATATGCAGT+CGG | 0.638450 | 1.2:+81879441 | None:intergenic |
| GGAAGATGTGGATGATGACA+TGG | 0.639734 | 1.2:-81880627 | MS.gene065146:CDS |
| CAGATTGTGAACTATAAGCA+CGG | 0.640362 | 1.2:+81878975 | None:intergenic |
| TGAGGATGCCAAAGAGAACG+TGG | 0.646565 | 1.2:-81877488 | MS.gene065146:CDS |
| AGAAAATGGGAGCTTAAATG+CGG | 0.652168 | 1.2:-81880483 | MS.gene065146:CDS |
| CAAGCCAACTCTTAAGACAC+GGG | 0.654132 | 1.2:-81878624 | MS.gene065146:CDS |
| AATAGAAAATCTTCAGCACA+AGG | 0.655625 | 1.2:-81882330 | MS.gene065146:intron |
| TAGACACGAAACAACAGGAA+GGG | 0.657156 | 1.2:+81879629 | None:intergenic |
| CGGATACATCTCAACCTAAG+GGG | 0.658910 | 1.2:+81878875 | None:intergenic |
| CATTGATGATGATGTTGTGG+AGG | 0.661802 | 1.2:-81877215 | MS.gene065146:CDS |
| TGATGACCACAAAACAATGG+AGG | 0.670885 | 1.2:-81880259 | MS.gene065146:CDS |
| AATGAGGCAGCTTATTCGCG+AGG | 0.672768 | 1.2:-81878444 | MS.gene065146:intron |
| AGATGAATGATGATCAACAT+CGG | 0.678740 | 1.2:+81877123 | None:intergenic |
| TGTCCTAAAAGCCCTCATCA+GGG | 0.678828 | 1.2:+81880454 | None:intergenic |
| GTACTTGAAAGAGAATGACC+CGG | 0.684135 | 1.2:-81881705 | MS.gene065146:CDS |
| ATAGACACGAAACAACAGGA+AGG | 0.702686 | 1.2:+81879628 | None:intergenic |
| TTGCGGAACACCTAGCACTG+TGG | 0.724336 | 1.2:-81878562 | MS.gene065146:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTACCTTTTATATATTTAT+TGG | - | chr1.2:81877632-81877651 | MS.gene065146:intron | 10.0% |
| !!! | TTACCTTTTATATATTTATT+GGG | - | chr1.2:81877633-81877652 | MS.gene065146:intron | 10.0% |
| !!! | TTTTTGACAATTTTATTTTA+TGG | - | chr1.2:81880320-81880339 | MS.gene065146:CDS | 10.0% |
| !! | AAACTTATATTTAGCTATTA+AGG | + | chr1.2:81877407-81877426 | None:intergenic | 15.0% |
| !! | AAATTAAGAATAGTATCATT+CGG | - | chr1.2:81879575-81879594 | MS.gene065146:CDS | 15.0% |
| !! | CACTTGATATAATAAAATAA+AGG | + | chr1.2:81881538-81881557 | None:intergenic | 15.0% |
| !! | TAAAATAAAGGAAAAGAAAA+TGG | + | chr1.2:81881526-81881545 | None:intergenic | 15.0% |
| !! | TACAATTCTCAAATATAAAT+GGG | + | chr1.2:81881621-81881640 | None:intergenic | 15.0% |
| !! | TGATAAAAGTAAAACATAAA+AGG | + | chr1.2:81881027-81881046 | None:intergenic | 15.0% |
| !! | TTACAATTCTCAAATATAAA+TGG | + | chr1.2:81881622-81881641 | None:intergenic | 15.0% |
| !!! | AAATTTTCTATCTTGATTAA+AGG | + | chr1.2:81878506-81878525 | None:intergenic | 15.0% |
| !!! | TTAATCAAGATAGAAAATTT+TGG | - | chr1.2:81878506-81878525 | MS.gene065146:CDS | 15.0% |
| !!! | TTATGTTTTACTTTTATCAT+TGG | - | chr1.2:81881028-81881047 | MS.gene065146:intron | 15.0% |
| !! | AAAAAAGGAACAAGAAATAT+TGG | + | chr1.2:81878055-81878074 | None:intergenic | 20.0% |
| !! | AAAAAGGAACAAGAAATATT+GGG | + | chr1.2:81878054-81878073 | None:intergenic | 20.0% |
| !! | AAAATATTCTTCATTGTTGT+TGG | - | chr1.2:81879284-81879303 | MS.gene065146:intron | 20.0% |
| !! | AAAATTAAATCTGTAGTGAT+TGG | + | chr1.2:81878320-81878339 | None:intergenic | 20.0% |
| !! | AGTAAACAAATGAATGAAAA+AGG | + | chr1.2:81881269-81881288 | None:intergenic | 20.0% |
| !! | ATAAAACAAAAAGGTTGAAA+AGG | - | chr1.2:81882347-81882366 | MS.gene065146:CDS | 20.0% |
| !! | GCAAATCAATTAAAGAAAAT+GGG | - | chr1.2:81878926-81878945 | MS.gene065146:CDS | 20.0% |
| !! | TACATTAATTGAGATGAATA+TGG | - | chr1.2:81877824-81877843 | MS.gene065146:intron | 20.0% |
| !! | TAGCCCAATAAATATATAAA+AGG | + | chr1.2:81877639-81877658 | None:intergenic | 20.0% |
| !! | TATAGAAGTTTATTTGCTTA+AGG | + | chr1.2:81881358-81881377 | None:intergenic | 20.0% |
| !! | TATATAACATAACAGCAAAA+AGG | + | chr1.2:81878595-81878614 | None:intergenic | 20.0% |
| !! | TGATATCATTTACTTTACAT+CGG | - | chr1.2:81879259-81879278 | MS.gene065146:intron | 20.0% |
| !! | TGATTAAAAAGCTTAATAGA+TGG | - | chr1.2:81879485-81879504 | MS.gene065146:CDS | 20.0% |
| !! | TGCAAATCAATTAAAGAAAA+TGG | - | chr1.2:81878925-81878944 | MS.gene065146:CDS | 20.0% |
| !! | TTAACATATGTCTATTCATT+TGG | - | chr1.2:81879708-81879727 | MS.gene065146:intron | 20.0% |
| !! | TTAAGCAAATAAACTTCTAT+AGG | - | chr1.2:81881357-81881376 | MS.gene065146:intron | 20.0% |
| !!! | AACTAAATTTTTCTGAAATC+TGG | - | chr1.2:81879517-81879536 | MS.gene065146:CDS | 20.0% |
| !!! | ACTTTTGTTTGTTTTGTATT+AGG | - | chr1.2:81877990-81878009 | MS.gene065146:intron | 20.0% |
| !!! | GCTATTAAGTTATTTCATTT+TGG | - | chr1.2:81881421-81881440 | MS.gene065146:intron | 20.0% |
| !!! | TTCTTTTTACTTTTTATCTG+AGG | - | chr1.2:81882105-81882124 | MS.gene065146:intron | 20.0% |
| !!! | TTTGTATTTTTTAGACCTAT+AGG | - | chr1.2:81878352-81878371 | MS.gene065146:intron | 20.0% |
| !!! | TTTTTGCTGTTATGTTATAT+AGG | - | chr1.2:81878594-81878613 | MS.gene065146:CDS | 20.0% |
| ! | AAACAAGACAGATATTAGAT+AGG | + | chr1.2:81877796-81877815 | None:intergenic | 25.0% |
| ! | ACAAAAAAACGACTCATTAA+AGG | - | chr1.2:81881729-81881748 | MS.gene065146:intron | 25.0% |
| ! | ACTAAGAAACAACAATGTAA+TGG | + | chr1.2:81877124-81877143 | None:intergenic | 25.0% |
| ! | ACTTTCTTGTTGAAATTATC+AGG | - | chr1.2:81879737-81879756 | MS.gene065146:intron | 25.0% |
| ! | AGAATCCTTCAAATAAGAAA+AGG | + | chr1.2:81877175-81877194 | None:intergenic | 25.0% |
| ! | AGACAAAGCATAAAACAAAA+AGG | - | chr1.2:81882338-81882357 | MS.gene065146:CDS | 25.0% |
| ! | ATCTCATTAGTAATGAGTAA+AGG | - | chr1.2:81880212-81880231 | MS.gene065146:CDS | 25.0% |
| ! | CGAATAAAACAAATCTATCA+AGG | + | chr1.2:81880255-81880274 | None:intergenic | 25.0% |
| ! | CTAAAAGATTTATAGCCTAT+AGG | + | chr1.2:81878370-81878389 | None:intergenic | 25.0% |
| ! | CTAAGAAACAACAATGTAAT+GGG | + | chr1.2:81877123-81877142 | None:intergenic | 25.0% |
| ! | TAAAGTTATAACCACTTCTA+TGG | - | chr1.2:81878891-81878910 | MS.gene065146:CDS | 25.0% |
| ! | TACCAATAATGAACACAAAA+TGG | + | chr1.2:81878292-81878311 | None:intergenic | 25.0% |
| ! | TACTCATTACTAATGAGATA+CGG | + | chr1.2:81880211-81880230 | None:intergenic | 25.0% |
| ! | TATAAGCAAATAAGCTGAAA+AGG | + | chr1.2:81877212-81877231 | None:intergenic | 25.0% |
| ! | TATGCAAGAATACCTTTAAA+AGG | + | chr1.2:81880769-81880788 | None:intergenic | 25.0% |
| ! | TGCACTTAATACAAAAACTA+AGG | - | chr1.2:81880040-81880059 | MS.gene065146:intron | 25.0% |
| !! | AAGAATACCTTTAAAAGGTT+AGG | + | chr1.2:81880764-81880783 | None:intergenic | 25.0% |
| !! | AAGGAAAAAAGTTTTTATGC+AGG | + | chr1.2:81881339-81881358 | None:intergenic | 25.0% |
| !! | CTATAGGCTATAAATCTTTT+AGG | - | chr1.2:81878368-81878387 | MS.gene065146:intron | 25.0% |
| !! | GTGAATTTAAAATTCAAACC+TGG | + | chr1.2:81881758-81881777 | None:intergenic | 25.0% |
| !! | TTCCATTTTGTGTTCATTAT+TGG | - | chr1.2:81878287-81878306 | MS.gene065146:CDS | 25.0% |
| !! | TTCTTAATTTTGTTCGAGTA+CGG | + | chr1.2:81879565-81879584 | None:intergenic | 25.0% |
| !! | TTTAAAGTAAAGTGACATTG+AGG | + | chr1.2:81881591-81881610 | None:intergenic | 25.0% |
| !!! | AATCTTTTAGGTTAAGGTTA+TGG | - | chr1.2:81878380-81878399 | MS.gene065146:intron | 25.0% |
| !!! | ACTTTCCTTTTCTTATTTGA+AGG | - | chr1.2:81877167-81877186 | MS.gene065146:CDS | 25.0% |
| !!! | AGAATTTTTTTCCCATATCT+AGG | + | chr1.2:81877924-81877943 | None:intergenic | 25.0% |
| !!! | AGATTTTCTCTTTACTTTTG+AGG | - | chr1.2:81881199-81881218 | MS.gene065146:intron | 25.0% |
| !!! | CATTAGTACTTTAAAGTTTG+TGG | - | chr1.2:81879398-81879417 | MS.gene065146:CDS | 25.0% |
| !!! | CTTTTTCGGATGAAAAAAAA+AGG | + | chr1.2:81878070-81878089 | None:intergenic | 25.0% |
| !!! | CTTTTTTTTTCATCCGAAAA+AGG | - | chr1.2:81878068-81878087 | MS.gene065146:intron | 25.0% |
| !!! | GCTATAAATCTTTTAGGTTA+AGG | - | chr1.2:81878374-81878393 | MS.gene065146:intron | 25.0% |
| !!! | TAAAGGTATTCTTGCATATT+AGG | - | chr1.2:81880771-81880790 | MS.gene065146:intron | 25.0% |
| !!! | TTAAATGTCTGAGCTATTTT+CGG | - | chr1.2:81877240-81877259 | MS.gene065146:CDS | 25.0% |
| !!! | TTCATTTTGGTCTATATATC+TGG | - | chr1.2:81881434-81881453 | MS.gene065146:intron | 25.0% |
| !!! | TTGTTTTATTCGTGTTTGAT+TGG | - | chr1.2:81880263-81880282 | MS.gene065146:CDS | 25.0% |
| AAAAATTCCAGTGTTCTTGT+TGG | - | chr1.2:81881848-81881867 | MS.gene065146:intron | 30.0% | |
| AAATACACATCTCACATCAA+TGG | + | chr1.2:81877867-81877886 | None:intergenic | 30.0% | |
| AATAGAAAATCTTCAGCACA+AGG | - | chr1.2:81877092-81877111 | MS.gene065146:CDS | 30.0% | |
| AATCTCTTGTAAGCTATAGA+TGG | - | chr1.2:81878456-81878475 | MS.gene065146:CDS | 30.0% | |
| ACTGTACTTAATGAAATGGA+TGG | - | chr1.2:81879078-81879097 | MS.gene065146:intron | 30.0% | |
| AGATACTGGTACAAAAGAAT+GGG | + | chr1.2:81880599-81880618 | None:intergenic | 30.0% | |
| AGATGAATGATGATCAACAT+CGG | + | chr1.2:81882302-81882321 | None:intergenic | 30.0% | |
| ATTAAATCTGTAGTGATTGG+TGG | + | chr1.2:81878317-81878336 | None:intergenic | 30.0% | |
| ATTTAGTAATGCACGCAAAT+AGG | + | chr1.2:81878710-81878729 | None:intergenic | 30.0% | |
| CACAACGAAATGTAAATTCA+AGG | - | chr1.2:81878156-81878175 | MS.gene065146:intron | 30.0% | |
| CAGTCATTTGATTCAAAATG+TGG | + | chr1.2:81879230-81879249 | None:intergenic | 30.0% | |
| GAAATGGCAATTCAAAACAT+AGG | + | chr1.2:81879889-81879908 | None:intergenic | 30.0% | |
| GATAGATCAATTGTTAGGAT+TGG | + | chr1.2:81880166-81880185 | None:intergenic | 30.0% | |
| GGCTACTCCAAAAATTATTT+GGG | + | chr1.2:81880500-81880519 | None:intergenic | 30.0% | |
| GTACCTTGATATATTTCCTT+AGG | + | chr1.2:81879326-81879345 | None:intergenic | 30.0% | |
| GTATGTGTGAAATTTGAACT+AGG | - | chr1.2:81877593-81877612 | MS.gene065146:intron | 30.0% | |
| GTGTCTTCTCAAAATCTAAT+AGG | + | chr1.2:81878410-81878429 | None:intergenic | 30.0% | |
| GTTGACTGTACTTAATGAAA+TGG | - | chr1.2:81879074-81879093 | MS.gene065146:intron | 30.0% | |
| TAGATACTGGTACAAAAGAA+TGG | + | chr1.2:81880600-81880619 | None:intergenic | 30.0% | |
| TCAAGGTACAAATAGTTCAT+TGG | - | chr1.2:81879337-81879356 | MS.gene065146:intron | 30.0% | |
| TCACGTTCATCAACTATATT+TGG | - | chr1.2:81878620-81878639 | MS.gene065146:CDS | 30.0% | |
| TGCATAGATGATTGCTTTAA+AGG | - | chr1.2:81879852-81879871 | MS.gene065146:intron | 30.0% | |
| TGGAAGAAAAGAGATCATAA+TGG | - | chr1.2:81879137-81879156 | MS.gene065146:intron | 30.0% | |
| TTAAATCTGTAGTGATTGGT+GGG | + | chr1.2:81878316-81878335 | None:intergenic | 30.0% | |
| TTCAAGCAATGTTTATCTCT+AGG | - | chr1.2:81877442-81877461 | MS.gene065146:CDS | 30.0% | |
| ! | AAATCCACCTAACCTTTTAA+AGG | - | chr1.2:81880754-81880773 | MS.gene065146:intron | 30.0% |
| ! | AATACCTTTAAAAGGTTAGG+TGG | + | chr1.2:81880761-81880780 | None:intergenic | 30.0% |
| ! | ACCAGAAGTATATACTTACA+AGG | + | chr1.2:81879630-81879649 | None:intergenic | 30.0% |
| ! | ATTTGATGACCACAAAACAA+TGG | - | chr1.2:81879160-81879179 | MS.gene065146:intron | 30.0% |
| ! | CCAGAAGTATATACTTACAA+GGG | + | chr1.2:81879629-81879648 | None:intergenic | 30.0% |
| ! | GTTTTGTATTAGGAAGATGT+GGG | - | chr1.2:81878000-81878019 | MS.gene065146:intron | 30.0% |
| ! | TGATAATGATGTATGCATGT+TGG | + | chr1.2:81881805-81881824 | None:intergenic | 30.0% |
| ! | TGTCTTTTATTCCAATTGTG+AGG | - | chr1.2:81880908-81880927 | MS.gene065146:intron | 30.0% |
| ! | TGTTTTGTATTAGGAAGATG+TGG | - | chr1.2:81877999-81878018 | MS.gene065146:intron | 30.0% |
| ! | TTAACAAACTTTTCCATTGC+AGG | - | chr1.2:81877678-81877697 | MS.gene065146:intron | 30.0% |
| ! | TTCGTCTGAATGTTTTCTTT+AGG | - | chr1.2:81880360-81880379 | MS.gene065146:CDS | 30.0% |
| ! | TTCTGGTAATGTGAATGAAA+AGG | - | chr1.2:81879643-81879662 | MS.gene065146:CDS | 30.0% |
| ! | TTTTGTAGTGAACAATGATG+AGG | + | chr1.2:81879366-81879385 | None:intergenic | 30.0% |
| !! | ACAGTCAACTTGATTTTGAT+AGG | - | chr1.2:81881642-81881661 | MS.gene065146:intron | 30.0% |
| !! | AGTATTGATTGTTTCCTTGT+TGG | - | chr1.2:81881232-81881251 | MS.gene065146:intron | 30.0% |
| !! | TAGATTTTGAGAAGACACTT+GGG | - | chr1.2:81878412-81878431 | MS.gene065146:intron | 30.0% |
| !! | TTAGATTTTGAGAAGACACT+TGG | - | chr1.2:81878411-81878430 | MS.gene065146:intron | 30.0% |
| !! | TTGTTTTATGCTTTGTCTTG+CGG | + | chr1.2:81882336-81882355 | None:intergenic | 30.0% |
| !!! | TTTTTTTCCCATATCTAGGA+TGG | + | chr1.2:81877920-81877939 | None:intergenic | 30.0% |
| AAAAGGAAAGTTGCATACAC+AGG | + | chr1.2:81877158-81877177 | None:intergenic | 35.0% | |
| AAAGGTTTCGAAGAGAAATG+AGG | - | chr1.2:81880962-81880981 | MS.gene065146:intron | 35.0% | |
| AAATGCTAACATGTGCTCTA+AGG | - | chr1.2:81878180-81878199 | MS.gene065146:intron | 35.0% | |
| AAGTGCATCCCTTAAAATCA+TGG | + | chr1.2:81880027-81880046 | None:intergenic | 35.0% | |
| AATGCTAACATGTGCTCTAA+GGG | - | chr1.2:81878181-81878200 | MS.gene065146:intron | 35.0% | |
| ACAAAACAATGGAGGACTTA+TGG | - | chr1.2:81879171-81879190 | MS.gene065146:intron | 35.0% | |
| ACAAGTAAAGGTTTCAGTGA+AGG | - | chr1.2:81877537-81877556 | MS.gene065146:CDS | 35.0% | |
| AGAAAATGGGAGCTTAAATG+CGG | - | chr1.2:81878939-81878958 | MS.gene065146:CDS | 35.0% | |
| AGACATATTGCATGTCCATA+GGG | - | chr1.2:81877499-81877518 | MS.gene065146:CDS | 35.0% | |
| AGCTTGGAAGAATTGAAACA+TGG | + | chr1.2:81881308-81881327 | None:intergenic | 35.0% | |
| ATATATTTCCTTAGGAGCGA+AGG | + | chr1.2:81879318-81879337 | None:intergenic | 35.0% | |
| ATGAATAGACACGAAACAAC+AGG | + | chr1.2:81879801-81879820 | None:intergenic | 35.0% | |
| ATTGTTTCCTTGTTGGATGT+TGG | - | chr1.2:81881239-81881258 | MS.gene065146:intron | 35.0% | |
| CAAATCTATCAAGGAATGTC+TGG | + | chr1.2:81880246-81880265 | None:intergenic | 35.0% | |
| CAACTGTCGAATGAAAATGA+AGG | + | chr1.2:81880003-81880022 | None:intergenic | 35.0% | |
| CAGATTGTGAACTATAAGCA+CGG | + | chr1.2:81880450-81880469 | None:intergenic | 35.0% | |
| CCAAAAATTATTTGGGTCAG+TGG | + | chr1.2:81880493-81880512 | None:intergenic | 35.0% | |
| CCCTTGTAAGTATATACTTC+TGG | - | chr1.2:81879626-81879645 | MS.gene065146:CDS | 35.0% | |
| GAACTAGGTGGTAATTGATA+GGG | - | chr1.2:81877608-81877627 | MS.gene065146:intron | 35.0% | |
| GATTGAAGCAAAGCAACATA+AGG | - | chr1.2:81877065-81877084 | MS.gene065146:CDS | 35.0% | |
| GCAAATTGACCAAAGTTGAA+AGG | - | chr1.2:81880944-81880963 | MS.gene065146:intron | 35.0% | |
| GCTCCTAAGGAAATATATCA+AGG | - | chr1.2:81879320-81879339 | MS.gene065146:intron | 35.0% | |
| GGGCTACTCCAAAAATTATT+TGG | + | chr1.2:81880501-81880520 | None:intergenic | 35.0% | |
| GTCAGGATAGATCAATTGTT+AGG | + | chr1.2:81880171-81880190 | None:intergenic | 35.0% | |
| GTTTCACAGCATTTACGAAA+TGG | + | chr1.2:81879905-81879924 | None:intergenic | 35.0% | |
| TAAAAATCTTCGTCCTGCAA+TGG | + | chr1.2:81877694-81877713 | None:intergenic | 35.0% | |
| TAAATTCACCTCCATTCTCA+TGG | - | chr1.2:81881769-81881788 | MS.gene065146:intron | 35.0% | |
| TAGACATATTGCATGTCCAT+AGG | - | chr1.2:81877498-81877517 | MS.gene065146:CDS | 35.0% | |
| TCATTAACTCTCTTGAGCTT+TGG | - | chr1.2:81880413-81880432 | MS.gene065146:CDS | 35.0% | |
| TCTAACAGCAAAATGTTACG+AGG | + | chr1.2:81880120-81880139 | None:intergenic | 35.0% | |
| TCTAATGCCATCCTAGATAT+GGG | - | chr1.2:81877910-81877929 | MS.gene065146:intron | 35.0% | |
| TCTTCGAAACCTTTCAACTT+TGG | + | chr1.2:81880956-81880975 | None:intergenic | 35.0% | |
| TGAACTAGGTGGTAATTGAT+AGG | - | chr1.2:81877607-81877626 | MS.gene065146:intron | 35.0% | |
| TGAATATGTCTTCCAATGCT+TGG | - | chr1.2:81879429-81879448 | MS.gene065146:CDS | 35.0% | |
| TGATTTACGCAGCATATTGA+AGG | - | chr1.2:81880690-81880709 | MS.gene065146:intron | 35.0% | |
| TGGAGATGAAAGAGTTGAAT+AGG | - | chr1.2:81880638-81880657 | MS.gene065146:intron | 35.0% | |
| TGTAGGAAATCTCAAGAGAT+TGG | - | chr1.2:81878659-81878678 | MS.gene065146:intron | 35.0% | |
| TGTGTGAAATTTGAACTAGG+TGG | - | chr1.2:81877596-81877615 | MS.gene065146:intron | 35.0% | |
| TTCTAATGCCATCCTAGATA+TGG | - | chr1.2:81877909-81877928 | MS.gene065146:intron | 35.0% | |
| TTCTTCATCACCAAAAACAG+AGG | + | chr1.2:81881882-81881901 | None:intergenic | 35.0% | |
| TTTATTGGGCTACATTCTGT+TGG | - | chr1.2:81877647-81877666 | MS.gene065146:intron | 35.0% | |
| ! | AATTTTCCACACTCAGATTG+AGG | - | chr1.2:81881088-81881107 | MS.gene065146:intron | 35.0% |
| ! | ACAGTTGGCCATGATTTTAA+GGG | - | chr1.2:81880016-81880035 | MS.gene065146:intron | 35.0% |
| ! | AGAGCAATACTTGTCATTTC+CGG | + | chr1.2:81881993-81882012 | None:intergenic | 35.0% |
| ! | CCACTGACCCAAATAATTTT+TGG | - | chr1.2:81880490-81880509 | MS.gene065146:CDS | 35.0% |
| ! | CTTCATTTTCATTCGACAGT+TGG | - | chr1.2:81880001-81880020 | MS.gene065146:intron | 35.0% |
| ! | CTTTTCGCAAGGTTTATGAA+TGG | - | chr1.2:81880386-81880405 | MS.gene065146:CDS | 35.0% |
| ! | GTGCAGTGATCATAATTTGT+AGG | - | chr1.2:81878642-81878661 | MS.gene065146:intron | 35.0% |
| ! | TTCTTTTATCCAGGAAGATG+TGG | - | chr1.2:81878783-81878802 | MS.gene065146:CDS | 35.0% |
| ! | TTGTGTGTTTGCTGGTAAAT+TGG | - | chr1.2:81878536-81878555 | MS.gene065146:CDS | 35.0% |
| !! | AAGAACATTTGTGACTTGCT+AGG | - | chr1.2:81879676-81879695 | MS.gene065146:intron | 35.0% |
| !! | AGATTTTGAGAAGACACTTG+GGG | - | chr1.2:81878413-81878432 | MS.gene065146:intron | 35.0% |
| !! | ATAAGTCCTCCATTGTTTTG+TGG | + | chr1.2:81879172-81879191 | None:intergenic | 35.0% |
| !! | ATACTTTGATAGTGCACTAG+AGG | + | chr1.2:81881683-81881702 | None:intergenic | 35.0% |
| !! | TATTGAAGGTACTCGTTACT+TGG | - | chr1.2:81880704-81880723 | MS.gene065146:intron | 35.0% |
| !!! | CGTAACATTTTGCTGTTAGA+GGG | - | chr1.2:81880120-81880139 | MS.gene065146:CDS | 35.0% |
| !!! | CGTTTTTTTGTTTTGCTCTC+TGG | + | chr1.2:81881720-81881739 | None:intergenic | 35.0% |
| !!! | TCGTAACATTTTGCTGTTAG+AGG | - | chr1.2:81880119-81880138 | MS.gene065146:CDS | 35.0% |
| !!! | TGCTTTTTCCTCTTTCCTTT+TGG | + | chr1.2:81882169-81882188 | None:intergenic | 35.0% |
| !!! | TTTGTCTTGCGGTTTTGTTT+TGG | + | chr1.2:81882325-81882344 | None:intergenic | 35.0% |
| !!! | TTTTTTGTTTTGCTCTCTGG+CGG | + | chr1.2:81881717-81881736 | None:intergenic | 35.0% |
| AACTGCGTCATTGAACTTCT+CGG | - | chr1.2:81879948-81879967 | MS.gene065146:intron | 40.0% | |
| AAGTGTCAAGCTCATAAGTC+AGG | + | chr1.2:81880188-81880207 | None:intergenic | 40.0% | |
| AATTACTGCACAAGACCGAA+TGG | + | chr1.2:81879466-81879485 | None:intergenic | 40.0% | |
| AATTGGTTGAAGAGGAATGC+CGG | - | chr1.2:81878553-81878572 | MS.gene065146:CDS | 40.0% | |
| ACAGTAATCCATGAGAATGG+AGG | + | chr1.2:81881780-81881799 | None:intergenic | 40.0% | |
| ACATTGAGGCGTGAAATAAG+TGG | + | chr1.2:81881577-81881596 | None:intergenic | 40.0% | |
| ACGACTCATTAAAGGAATCC+AGG | - | chr1.2:81881737-81881756 | MS.gene065146:intron | 40.0% | |
| ACGTAGACGAAGACAAGTAA+AGG | - | chr1.2:81877525-81877544 | MS.gene065146:CDS | 40.0% | |
| AGAGAGTTGTGCATCTGTAT+TGG | - | chr1.2:81879822-81879841 | MS.gene065146:intron | 40.0% | |
| AGGAGCAATCTTGACAATAC+CGG | + | chr1.2:81878575-81878594 | None:intergenic | 40.0% | |
| AGTAAGCTGCTTATCCAAAC+AGG | - | chr1.2:81877380-81877399 | MS.gene065146:intron | 40.0% | |
| ATAGACACGAAACAACAGGA+AGG | + | chr1.2:81879797-81879816 | None:intergenic | 40.0% | |
| ATCAGGTGTCTCTTCATTTC+TGG | - | chr1.2:81879754-81879773 | MS.gene065146:intron | 40.0% | |
| CAAGGTAGGACTTCACAATA+TGG | + | chr1.2:81879197-81879216 | None:intergenic | 40.0% | |
| CATATTGTGAAGTCCTACCT+TGG | - | chr1.2:81879195-81879214 | MS.gene065146:intron | 40.0% | |
| CATTGAGGCGTGAAATAAGT+GGG | + | chr1.2:81881576-81881595 | None:intergenic | 40.0% | |
| CATTGCAGTGGCTAAATGAT+GGG | - | chr1.2:81878092-81878111 | MS.gene065146:intron | 40.0% | |
| CCACAAATCAACCATAGAAG+TGG | + | chr1.2:81878905-81878924 | None:intergenic | 40.0% | |
| CTACTGAACCAAAAGGAAAG+AGG | - | chr1.2:81882158-81882177 | MS.gene065146:intron | 40.0% | |
| CTCCACAACATCATCATCAA+TGG | + | chr1.2:81882209-81882228 | None:intergenic | 40.0% | |
| CTTAGCTACTAAGCTTGCAT+TGG | - | chr1.2:81877942-81877961 | MS.gene065146:intron | 40.0% | |
| GAAGAATTGAAACATGGAGC+AGG | + | chr1.2:81881302-81881321 | None:intergenic | 40.0% | |
| GACACAGTAATCCATGAGAA+TGG | + | chr1.2:81881783-81881802 | None:intergenic | 40.0% | |
| GCCACAAACATGTCTCTAAA+GGG | + | chr1.2:81878132-81878151 | None:intergenic | 40.0% | |
| GCTAAACACTATCGTATGGT+GGG | - | chr1.2:81881456-81881475 | MS.gene065146:intron | 40.0% | |
| GGAGGATACTAAAGAGAATG+AGG | - | chr1.2:81881916-81881935 | MS.gene065146:intron | 40.0% | |
| GTAAGCTGCTTATCCAAACA+GGG | - | chr1.2:81877381-81877400 | MS.gene065146:intron | 40.0% | |
| GTACTTGAAAGAGAATGACC+CGG | - | chr1.2:81877717-81877736 | MS.gene065146:CDS | 40.0% | |
| TAGACACGAAACAACAGGAA+GGG | + | chr1.2:81879796-81879815 | None:intergenic | 40.0% | |
| TCAAGAAAAGATGATGCTGC+AGG | + | chr1.2:81881170-81881189 | None:intergenic | 40.0% | |
| TCACTGAACTTAAGCAGATC+CGG | + | chr1.2:81877739-81877758 | None:intergenic | 40.0% | |
| TCAGGTGTCTCTTCATTTCT+GGG | - | chr1.2:81879755-81879774 | MS.gene065146:intron | 40.0% | |
| TCATCTCCAGCATATCCAAA+AGG | + | chr1.2:81880627-81880646 | None:intergenic | 40.0% | |
| TCATTGCAGTGGCTAAATGA+TGG | - | chr1.2:81878091-81878110 | MS.gene065146:intron | 40.0% | |
| TCTCATCATCATCACCATAG+TGG | + | chr1.2:81878999-81879018 | None:intergenic | 40.0% | |
| TCTGGCTAAACACTATCGTA+TGG | - | chr1.2:81881452-81881471 | MS.gene065146:intron | 40.0% | |
| TGAAGAATCAGCAAGTGATG+AGG | - | chr1.2:81881895-81881914 | MS.gene065146:intron | 40.0% | |
| TGATGACCACAAAACAATGG+AGG | - | chr1.2:81879163-81879182 | MS.gene065146:intron | 40.0% | |
| TGCAGGATCATTAGGTAGAA+AGG | + | chr1.2:81881153-81881172 | None:intergenic | 40.0% | |
| TGCCACAAACATGTCTCTAA+AGG | + | chr1.2:81878133-81878152 | None:intergenic | 40.0% | |
| TGCTGGTAAATTGGTTGAAG+AGG | - | chr1.2:81878545-81878564 | MS.gene065146:CDS | 40.0% | |
| TTAGCTATTAAGGCCCTGTT+TGG | + | chr1.2:81877397-81877416 | None:intergenic | 40.0% | |
| TTCTGTGGTTGAAGAACTTG+CGG | - | chr1.2:81880843-81880862 | MS.gene065146:intron | 40.0% | |
| TTCTTCTCCAACAAGAACAC+TGG | + | chr1.2:81881858-81881877 | None:intergenic | 40.0% | |
| TTGTGCATCTGTATTGGATC+TGG | - | chr1.2:81879828-81879847 | MS.gene065146:intron | 40.0% | |
| ! | ACCAGTATCTATGCTCCTTT+TGG | - | chr1.2:81880609-81880628 | MS.gene065146:CDS | 40.0% |
| ! | ATCAACATCGGCATTTTTCC+CGG | + | chr1.2:81882290-81882309 | None:intergenic | 40.0% |
| ! | CTGTTTCGCTTCTTTTATCC+AGG | - | chr1.2:81878774-81878793 | MS.gene065146:CDS | 40.0% |
| ! | GACAGTTGGCCATGATTTTA+AGG | - | chr1.2:81880015-81880034 | MS.gene065146:intron | 40.0% |
| ! | GAGCAATACTTGTCATTTCC+GGG | + | chr1.2:81881992-81882011 | None:intergenic | 40.0% |
| ! | GGAGAAGAATCCTCTGTTTT+TGG | - | chr1.2:81881869-81881888 | MS.gene065146:intron | 40.0% |
| ! | TATGCTCCTTTTGGATATGC+TGG | - | chr1.2:81880618-81880637 | MS.gene065146:CDS | 40.0% |
| ! | TCCAAAAGGAGCATAGATAC+TGG | + | chr1.2:81880613-81880632 | None:intergenic | 40.0% |
| ! | TCCCTTTAGAGACATGTTTG+TGG | - | chr1.2:81878128-81878147 | MS.gene065146:intron | 40.0% |
| ! | TGCAGCATCATCTTTTCTTG+AGG | - | chr1.2:81881169-81881188 | MS.gene065146:intron | 40.0% |
| ! | TGCGCTTTTCATTCACAAAC+TGG | + | chr1.2:81881121-81881140 | None:intergenic | 40.0% |
| !! | AAATGTGGAGAGCATTTCCA+AGG | + | chr1.2:81879215-81879234 | None:intergenic | 40.0% |
| !! | CAATTGTTAGGATTGGTTCC+AGG | + | chr1.2:81880159-81880178 | None:intergenic | 40.0% |
| !! | CATTGATGATGATGTTGTGG+AGG | - | chr1.2:81882207-81882226 | MS.gene065146:intron | 40.0% |
| !! | CCACTTCTATGGTTGATTTG+TGG | - | chr1.2:81878902-81878921 | MS.gene065146:CDS | 40.0% |
| !! | TCTTTAGGAAGCTTTTCGCA+AGG | - | chr1.2:81880375-81880394 | MS.gene065146:CDS | 40.0% |
| !! | TGCCATTGATGATGATGTTG+TGG | - | chr1.2:81882204-81882223 | MS.gene065146:intron | 40.0% |
| !!! | AGAGGCTTGTGTTTTTTCTG+TGG | - | chr1.2:81880828-81880847 | MS.gene065146:intron | 40.0% |
| !!! | CTCTTTCCTTTTGGTTCAGT+AGG | + | chr1.2:81882160-81882179 | None:intergenic | 40.0% |
| AAGTTGCGCAACCTCACAAT+TGG | + | chr1.2:81880922-81880941 | None:intergenic | 45.0% | |
| AATGCCCGTGTCTTAAGAGT+TGG | + | chr1.2:81880805-81880824 | None:intergenic | 45.0% | |
| AATGGGTAGAAGCAGCAATC+TGG | + | chr1.2:81880582-81880601 | None:intergenic | 45.0% | |
| AGAACCACAGGTAGATGAGA+AGG | - | chr1.2:81878825-81878844 | MS.gene065146:CDS | 45.0% | |
| AGAATCAGCAAGTGATGAGG+AGG | - | chr1.2:81881898-81881917 | MS.gene065146:intron | 45.0% | |
| AGCATCGTCAGTCACTTCAT+TGG | + | chr1.2:81881404-81881423 | None:intergenic | 45.0% | |
| AGGTCAACCAACATCCAACA+AGG | + | chr1.2:81881249-81881268 | None:intergenic | 45.0% | |
| AGTTCCATCCACGTTCTCTT+TGG | + | chr1.2:81881945-81881964 | None:intergenic | 45.0% | |
| ATAGCCTTCTCATCTACCTG+TGG | + | chr1.2:81878832-81878851 | None:intergenic | 45.0% | |
| CAACAGCCTACTGAACCAAA+AGG | - | chr1.2:81882151-81882170 | MS.gene065146:intron | 45.0% | |
| CAAGCCAACTCTTAAGACAC+GGG | - | chr1.2:81880798-81880817 | MS.gene065146:intron | 45.0% | |
| CACTGAACTTAAGCAGATCC+GGG | + | chr1.2:81877738-81877757 | None:intergenic | 45.0% | |
| CACTGTGGAGTTACTCTGTT+GGG | - | chr1.2:81880875-81880894 | MS.gene065146:intron | 45.0% | |
| CAGGTGTCTCTTCATTTCTG+GGG | - | chr1.2:81879756-81879775 | MS.gene065146:intron | 45.0% | |
| CCGGATACATCTCAACCTAA+GGG | + | chr1.2:81880551-81880570 | None:intergenic | 45.0% | |
| CGGATACATCTCAACCTAAG+GGG | + | chr1.2:81880550-81880569 | None:intergenic | 45.0% | |
| CTGAGGAATGCTTTGCTTTC+AGG | - | chr1.2:81882122-81882141 | MS.gene065146:intron | 45.0% | |
| GAGGGATACAATCAATCACC+TGG | - | chr1.2:81880138-81880157 | MS.gene065146:CDS | 45.0% | |
| GAGTTACTCTGTTGGGTTCA+TGG | - | chr1.2:81880882-81880901 | MS.gene065146:intron | 45.0% | |
| GATGATGCTGCAGGATCATT+AGG | + | chr1.2:81881161-81881180 | None:intergenic | 45.0% | |
| GCAAGCCAACTCTTAAGACA+CGG | - | chr1.2:81880797-81880816 | MS.gene065146:intron | 45.0% | |
| GGAAGATGTGGATGATGACA+TGG | - | chr1.2:81878795-81878814 | MS.gene065146:CDS | 45.0% | |
| GGCTAAACACTATCGTATGG+TGG | - | chr1.2:81881455-81881474 | MS.gene065146:intron | 45.0% | |
| GTGGATGATGACATGGAAGA+TGG | - | chr1.2:81878802-81878821 | MS.gene065146:CDS | 45.0% | |
| GTGTGTTTGTGTATGCAGCT+GGG | + | chr1.2:81882044-81882063 | None:intergenic | 45.0% | |
| TAAGACACGGGCATTTCAAG+AGG | - | chr1.2:81880810-81880829 | MS.gene065146:intron | 45.0% | |
| TCCGAAAAAGGTCATTGCAG+TGG | - | chr1.2:81878080-81878099 | MS.gene065146:intron | 45.0% | |
| TCCGGATACATCTCAACCTA+AGG | + | chr1.2:81880552-81880571 | None:intergenic | 45.0% | |
| TGAGAAGGCTATTGAGCATG+AGG | - | chr1.2:81878840-81878859 | MS.gene065146:CDS | 45.0% | |
| TGAGCATGAGGTTCAAGCAA+AGG | - | chr1.2:81878852-81878871 | MS.gene065146:CDS | 45.0% | |
| TGTCATCATCCACATCTTCC+TGG | + | chr1.2:81878795-81878814 | None:intergenic | 45.0% | |
| TGTCCTAAAAGCCCTCATCA+GGG | + | chr1.2:81878971-81878990 | None:intergenic | 45.0% | |
| TTGTTGAAGCTTCCTGCTTC+TGG | - | chr1.2:81879114-81879133 | MS.gene065146:intron | 45.0% | |
| ! | AAGGCGTGTTGATATGCAGT+CGG | + | chr1.2:81879984-81880003 | None:intergenic | 45.0% |
| ! | CAGCAATCTGGTTCAACATC+CGG | + | chr1.2:81880570-81880589 | None:intergenic | 45.0% |
| ! | CATTAGCCTCAATCTGAGTG+TGG | + | chr1.2:81881097-81881116 | None:intergenic | 45.0% |
| ! | CTTCCAATGCTTGGTGATTG+TGG | - | chr1.2:81879438-81879457 | MS.gene065146:CDS | 45.0% |
| ! | GCCACTGCAATGACCTTTTT+CGG | + | chr1.2:81878084-81878103 | None:intergenic | 45.0% |
| ! | TCTTTTCTTCCACCAGAAGC+AGG | + | chr1.2:81879129-81879148 | None:intergenic | 45.0% |
| ! | TGATGATGTTGTGGAGGACT+TGG | - | chr1.2:81882213-81882232 | MS.gene065146:intron | 45.0% |
| ! | TTGGTGATTGTGGCACCATT+CGG | - | chr1.2:81879448-81879467 | MS.gene065146:CDS | 45.0% |
| ! | TTTAGCTCATCCTGGTTACC+CGG | - | chr1.2:81881971-81881990 | MS.gene065146:intron | 45.0% |
| ! | TTTAGGACAGCATGCCACTA+TGG | - | chr1.2:81878982-81879001 | MS.gene065146:CDS | 45.0% |
| !! | CCCTTAGGTTGAGATGTATC+CGG | - | chr1.2:81880548-81880567 | MS.gene065146:CDS | 45.0% |
| !! | TCTCTTCATTTCTGGGGTAC+TGG | - | chr1.2:81879762-81879781 | MS.gene065146:intron | 45.0% |
| AATGAGGCAGCTTATTCGCG+AGG | - | chr1.2:81880978-81880997 | MS.gene065146:intron | 50.0% | |
| ACCTAGCTGTGGGAACTAGA+CGG | + | chr1.2:81880522-81880541 | None:intergenic | 50.0% | |
| CAGAGTAACTCCACAGTGCT+AGG | + | chr1.2:81880873-81880892 | None:intergenic | 50.0% | |
| CAGCTAGGTACTTTCCCCTT+AGG | - | chr1.2:81880533-81880552 | MS.gene065146:CDS | 50.0% | |
| CATGGAAGATGGAGAACCAC+AGG | - | chr1.2:81878813-81878832 | MS.gene065146:CDS | 50.0% | |
| CGTCATTGAACTTCTCGGAG+TGG | - | chr1.2:81879953-81879972 | MS.gene065146:intron | 50.0% | |
| CGTGTGTTTGTGTATGCAGC+TGG | + | chr1.2:81882045-81882064 | None:intergenic | 50.0% | |
| CTGTCCTAAAAGCCCTCATC+AGG | + | chr1.2:81878972-81878991 | None:intergenic | 50.0% | |
| CTTCGTCTACGTCTACCCTA+TGG | + | chr1.2:81877517-81877536 | None:intergenic | 50.0% | |
| GACTGTGCTTGTGTGTTTGC+TGG | - | chr1.2:81878528-81878547 | MS.gene065146:CDS | 50.0% | |
| GATGCCAAAGAGAACGTGGA+TGG | - | chr1.2:81881938-81881957 | MS.gene065146:intron | 50.0% | |
| GCACTGTGGAGTTACTCTGT+TGG | - | chr1.2:81880874-81880893 | MS.gene065146:intron | 50.0% | |
| GTGCCACAATCACCAAGCAT+TGG | + | chr1.2:81879444-81879463 | None:intergenic | 50.0% | |
| TATGCAGGTAGCTGAGAGCT+TGG | + | chr1.2:81881324-81881343 | None:intergenic | 50.0% | |
| TGAGGATGCCAAAGAGAACG+TGG | - | chr1.2:81881934-81881953 | MS.gene065146:intron | 50.0% | |
| TTGAAGCTTCCTGCTTCTGG+TGG | - | chr1.2:81879117-81879136 | MS.gene065146:intron | 50.0% | |
| ! | CTGCTGCATTTAGCTCATCC+TGG | - | chr1.2:81881963-81881982 | MS.gene065146:intron | 50.0% |
| ! | CTTGTCATTTCCGGGTAACC+AGG | + | chr1.2:81881984-81882003 | None:intergenic | 50.0% |
| ! | GTTCCCTGATGAGGGCTTTT+AGG | - | chr1.2:81878965-81878984 | MS.gene065146:CDS | 50.0% |
| !! | AAGGGGAAAGTACCTAGCTG+TGG | + | chr1.2:81880533-81880552 | None:intergenic | 50.0% |
| !! | AGGGGAAAGTACCTAGCTGT+GGG | + | chr1.2:81880532-81880551 | None:intergenic | 50.0% |
| !! | CTAAATGATGGGTGACTGGC+TGG | - | chr1.2:81878103-81878122 | MS.gene065146:intron | 50.0% |
| !! | CTGCTTTTCCTTCGCTCCTA+AGG | - | chr1.2:81879307-81879326 | MS.gene065146:intron | 50.0% |
| !! | CTTCATTTCTGGGGTACTGG+TGG | - | chr1.2:81879765-81879784 | MS.gene065146:intron | 50.0% |
| !! | GTGGAGAGCATTTCCAAGGT+AGG | + | chr1.2:81879211-81879230 | None:intergenic | 50.0% |
| !! | GTGGCTAAATGATGGGTGAC+TGG | - | chr1.2:81878099-81878118 | MS.gene065146:intron | 50.0% |
| ATGCGGTTCGTTCCCTGATG+AGG | - | chr1.2:81878956-81878975 | MS.gene065146:CDS | 55.0% | |
| CCTAGCTGTGGGAACTAGAC+GGG | + | chr1.2:81880521-81880540 | None:intergenic | 55.0% | |
| CTTTGCCAACGCCTCCTGTA+GGG | + | chr1.2:81880666-81880685 | None:intergenic | 55.0% | |
| GAGTTGAATAGGCCCCCTAC+AGG | - | chr1.2:81880649-81880668 | MS.gene065146:intron | 55.0% | |
| TGCGGTTCGTTCCCTGATGA+GGG | - | chr1.2:81878957-81878976 | MS.gene065146:CDS | 55.0% | |
| TTGAATAGGCCCCCTACAGG+AGG | - | chr1.2:81880652-81880671 | MS.gene065146:intron | 55.0% | |
| TTGCGGAACACCTAGCACTG+TGG | - | chr1.2:81880860-81880879 | MS.gene065146:intron | 55.0% | |
| TTTGCCAACGCCTCCTGTAG+GGG | + | chr1.2:81880665-81880684 | None:intergenic | 55.0% | |
| ! | CGGCATTTTTCCCGGCAGAA+GGG | + | chr1.2:81882282-81882301 | None:intergenic | 55.0% |
| ! | TCGGCATTTTTCCCGGCAGA+AGG | + | chr1.2:81882283-81882302 | None:intergenic | 55.0% |
| !! | CATTTCTGGGGTACTGGTGG+AGG | - | chr1.2:81879768-81879787 | MS.gene065146:intron | 55.0% |
| GCTTTGCCAACGCCTCCTGT+AGG | + | chr1.2:81880667-81880686 | None:intergenic | 60.0% | |
| TCAAGCGACAGCCCTTCTGC+CGG | - | chr1.2:81882268-81882287 | MS.gene065146:intron | 60.0% | |
| TTGCCAACGCCTCCTGTAGG+GGG | + | chr1.2:81880664-81880683 | None:intergenic | 60.0% | |
| ! | CCCGTCTAGTTCCCACAGCT+AGG | - | chr1.2:81880518-81880537 | MS.gene065146:CDS | 60.0% |
| ! | GCAGAAGGGCTGTCGCTTGA+AGG | + | chr1.2:81882268-81882287 | None:intergenic | 60.0% |
| CAAGCGACAGCCCTTCTGCC+GGG | - | chr1.2:81882269-81882288 | MS.gene065146:intron | 65.0% | |
| ! | AGGCCCCCTACAGGAGGCGT+TGG | - | chr1.2:81880658-81880677 | MS.gene065146:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 81877057 | 81882387 | 81877057 | ID=MS.gene065146 |
| chr1.2 | mRNA | 81877057 | 81882387 | 81877057 | ID=MS.gene065146.t1;Parent=MS.gene065146 |
| chr1.2 | exon | 81882331 | 81882387 | 81882331 | ID=MS.gene065146.t1.exon1;Parent=MS.gene065146.t1 |
| chr1.2 | CDS | 81882331 | 81882387 | 81882331 | ID=cds.MS.gene065146.t1;Parent=MS.gene065146.t1 |
| chr1.2 | exon | 81881673 | 81881744 | 81881673 | ID=MS.gene065146.t1.exon2;Parent=MS.gene065146.t1 |
| chr1.2 | CDS | 81881673 | 81881744 | 81881673 | ID=cds.MS.gene065146.t1;Parent=MS.gene065146.t1 |
| chr1.2 | exon | 81880103 | 81880648 | 81880103 | ID=MS.gene065146.t1.exon3;Parent=MS.gene065146.t1 |
| chr1.2 | CDS | 81880103 | 81880648 | 81880103 | ID=cds.MS.gene065146.t1;Parent=MS.gene065146.t1 |
| chr1.2 | exon | 81879383 | 81879685 | 81879383 | ID=MS.gene065146.t1.exon4;Parent=MS.gene065146.t1 |
| chr1.2 | CDS | 81879383 | 81879685 | 81879383 | ID=cds.MS.gene065146.t1;Parent=MS.gene065146.t1 |
| chr1.2 | exon | 81878733 | 81879062 | 81878733 | ID=MS.gene065146.t1.exon5;Parent=MS.gene065146.t1 |
| chr1.2 | CDS | 81878733 | 81879062 | 81878733 | ID=cds.MS.gene065146.t1;Parent=MS.gene065146.t1 |
| chr1.2 | exon | 81878445 | 81878651 | 81878445 | ID=MS.gene065146.t1.exon6;Parent=MS.gene065146.t1 |
| chr1.2 | CDS | 81878445 | 81878651 | 81878445 | ID=cds.MS.gene065146.t1;Parent=MS.gene065146.t1 |
| chr1.2 | exon | 81878254 | 81878340 | 81878254 | ID=MS.gene065146.t1.exon7;Parent=MS.gene065146.t1 |
| chr1.2 | CDS | 81878254 | 81878340 | 81878254 | ID=cds.MS.gene065146.t1;Parent=MS.gene065146.t1 |
| chr1.2 | exon | 81877686 | 81877780 | 81877686 | ID=MS.gene065146.t1.exon8;Parent=MS.gene065146.t1 |
| chr1.2 | CDS | 81877686 | 81877780 | 81877686 | ID=cds.MS.gene065146.t1;Parent=MS.gene065146.t1 |
| chr1.2 | exon | 81877442 | 81877585 | 81877442 | ID=MS.gene065146.t1.exon9;Parent=MS.gene065146.t1 |
| chr1.2 | CDS | 81877442 | 81877585 | 81877442 | ID=cds.MS.gene065146.t1;Parent=MS.gene065146.t1 |
| chr1.2 | exon | 81877057 | 81877300 | 81877057 | ID=MS.gene065146.t1.exon10;Parent=MS.gene065146.t1 |
| chr1.2 | CDS | 81877057 | 81877300 | 81877057 | ID=cds.MS.gene065146.t1;Parent=MS.gene065146.t1 |
| Gene Sequence |
| Protein sequence |
