Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061835.t1 | RHN48318.1 | 98.1 | 360 | 7 | 0 | 1 | 360 | 76 | 435 | 5.00E-208 | 733.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061835.t1 | Q9LF27 | 69.7 | 360 | 108 | 1 | 1 | 359 | 73 | 432 | 7.5e-152 | 538.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061835.t1 | A0A396H694 | 98.1 | 360 | 7 | 0 | 1 | 360 | 76 | 435 | 3.6e-208 | 733.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058030 | MS.gene061835 | 0.822836 | 1.91E-53 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061835.t1 | MTR_7g099170 | 97.500 | 360 | 9 | 0 | 1 | 360 | 104 | 463 | 0.0 | 723 |
| MS.gene061835.t1 | MTR_7g099170 | 97.500 | 360 | 9 | 0 | 1 | 360 | 76 | 435 | 0.0 | 721 |
| MS.gene061835.t1 | MTR_7g086360 | 26.201 | 229 | 138 | 6 | 128 | 353 | 50 | 250 | 2.40e-13 | 70.9 |
| MS.gene061835.t1 | MTR_2g029940 | 27.273 | 209 | 122 | 8 | 171 | 353 | 115 | 319 | 7.83e-13 | 69.7 |
| MS.gene061835.t1 | MTR_8g106790 | 26.339 | 224 | 123 | 9 | 74 | 268 | 11 | 221 | 1.46e-12 | 68.2 |
| MS.gene061835.t1 | MTR_4g119620 | 24.354 | 271 | 159 | 8 | 71 | 333 | 20 | 252 | 4.41e-12 | 66.6 |
| MS.gene061835.t1 | MTR_6g004040 | 25.000 | 232 | 134 | 9 | 124 | 347 | 5 | 204 | 1.19e-11 | 66.6 |
| MS.gene061835.t1 | MTR_3g045130 | 23.793 | 290 | 160 | 10 | 53 | 324 | 275 | 521 | 1.49e-11 | 65.9 |
| MS.gene061835.t1 | MTR_1g097140 | 25.614 | 285 | 169 | 9 | 72 | 353 | 74 | 318 | 5.86e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061835.t1 | AT5G15550 | 71.111 | 360 | 103 | 1 | 1 | 359 | 73 | 432 | 0.0 | 543 |
| MS.gene061835.t1 | AT5G15550 | 71.111 | 360 | 103 | 1 | 1 | 359 | 73 | 432 | 0.0 | 543 |
| MS.gene061835.t1 | AT5G15550 | 71.473 | 319 | 90 | 1 | 1 | 318 | 73 | 391 | 2.49e-173 | 488 |
| MS.gene061835.t1 | AT2G41500 | 26.846 | 298 | 171 | 11 | 52 | 344 | 269 | 524 | 5.67e-16 | 79.7 |
| MS.gene061835.t1 | AT2G41500 | 26.846 | 298 | 171 | 11 | 52 | 344 | 269 | 524 | 5.67e-16 | 79.7 |
| MS.gene061835.t1 | AT2G43770 | 26.201 | 229 | 138 | 6 | 128 | 353 | 48 | 248 | 2.72e-14 | 73.6 |
| MS.gene061835.t1 | AT3G49660 | 27.642 | 246 | 130 | 10 | 97 | 333 | 39 | 245 | 2.26e-13 | 70.5 |
| MS.gene061835.t1 | AT4G15900 | 25.106 | 235 | 132 | 7 | 124 | 349 | 167 | 366 | 2.38e-13 | 71.2 |
| MS.gene061835.t1 | AT4G02730 | 27.863 | 262 | 147 | 11 | 74 | 333 | 39 | 260 | 2.60e-13 | 70.5 |
| MS.gene061835.t1 | AT3G16650 | 26.383 | 235 | 128 | 8 | 124 | 349 | 161 | 359 | 4.32e-12 | 67.4 |
| MS.gene061835.t1 | AT1G48630 | 27.189 | 217 | 124 | 10 | 77 | 268 | 14 | 221 | 1.00e-11 | 65.9 |
| MS.gene061835.t1 | AT5G64730 | 23.607 | 305 | 186 | 11 | 72 | 351 | 12 | 294 | 1.01e-11 | 65.5 |
| MS.gene061835.t1 | AT5G52820 | 24.638 | 345 | 182 | 12 | 70 | 353 | 101 | 428 | 1.11e-11 | 66.2 |
| MS.gene061835.t1 | AT3G18130 | 26.697 | 221 | 128 | 10 | 73 | 268 | 10 | 221 | 2.07e-11 | 64.7 |
| MS.gene061835.t1 | AT5G08390 | 25.094 | 267 | 158 | 8 | 97 | 360 | 32 | 259 | 2.96e-11 | 65.5 |
| MS.gene061835.t1 | AT1G18080 | 26.054 | 261 | 152 | 10 | 74 | 328 | 11 | 236 | 4.55e-11 | 63.9 |
Find 91 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGATCATTCTATTAGAAAA+TGG | 0.173356 | 7.4:-11438826 | MS.gene061835:CDS |
| ATCAGGTTTGTTCTGGTTCT+TGG | 0.176128 | 7.4:-11439596 | MS.gene061835:intron |
| CTGACCCCGTCGTTAGGATT+TGG | 0.240558 | 7.4:-11437988 | MS.gene061835:CDS |
| AGTTTGCTTCTCATACTTCT+TGG | 0.269982 | 7.4:-11437831 | MS.gene061835:CDS |
| TCACATGATCAGGTTTGTTC+TGG | 0.299186 | 7.4:-11439603 | MS.gene061835:intron |
| TGACCCCGTCGTTAGGATTT+GGG | 0.302501 | 7.4:-11437987 | MS.gene061835:CDS |
| TTAATTATAGGAAAGGATAT+TGG | 0.342666 | 7.4:-11442024 | MS.gene061835:intron |
| ATGATGGGAAAGTTATGTTA+TGG | 0.343677 | 7.4:-11437753 | MS.gene061835:CDS |
| TCAGGTTTGTTCTGGTTCTT+GGG | 0.356523 | 7.4:-11439595 | MS.gene061835:intron |
| ACAGGCTGTTATGATGGTTT+TGG | 0.364714 | 7.4:-11441194 | MS.gene061835:CDS |
| CTGTTGATGGTTCTTCTTCT+CGG | 0.368614 | 7.4:-11441929 | MS.gene061835:intron |
| GTTTGCTTCTCATACTTCTT+GGG | 0.370787 | 7.4:-11437830 | MS.gene061835:CDS |
| TTACTTTCTGCATCTTATGA+TGG | 0.391325 | 7.4:-11437769 | MS.gene061835:CDS |
| TGATGGGAAAGTTATGTTAT+GGG | 0.397814 | 7.4:-11437752 | MS.gene061835:CDS |
| CGGATTATGTACACATATAT+TGG | 0.404257 | 7.4:-11441022 | MS.gene061835:CDS |
| AATTGAGGACTCTCAATTAG+AGG | 0.410780 | 7.4:-11439490 | MS.gene061835:intron |
| GTCAATCTATTCTGCATCTT+GGG | 0.418571 | 7.4:-11438846 | MS.gene061835:CDS |
| ATTGATTTGCCATAGGTTGA+TGG | 0.422151 | 7.4:+11439566 | None:intergenic |
| GGATCATTCTATTAGAAAAT+GGG | 0.423019 | 7.4:-11438825 | MS.gene061835:CDS |
| AGTCAATCTATTCTGCATCT+TGG | 0.432069 | 7.4:-11438847 | MS.gene061835:CDS |
| CAATATATGTGTACATAATC+CGG | 0.433739 | 7.4:+11441023 | None:intergenic |
| GACTGGGTCAGTGCTGTTGA+TGG | 0.443573 | 7.4:-11441942 | MS.gene061835:CDS |
| CAGAAGACACGCACTGTGTA+TGG | 0.444936 | 7.4:+11438888 | None:intergenic |
| GAATAGATTGACTCTCTTTG+TGG | 0.456040 | 7.4:+11438857 | None:intergenic |
| AGTGCGTGTCTTCTGTGATT+TGG | 0.460545 | 7.4:-11438880 | MS.gene061835:CDS |
| TACTTTCTGCATCTTATGAT+GGG | 0.461054 | 7.4:-11437768 | MS.gene061835:CDS |
| AAGGGTCCTCTTCCTTTCGT+GGG | 0.462510 | 7.4:+11441976 | None:intergenic |
| CTTGTCACTGTGAGATTCAA+TGG | 0.463120 | 7.4:+11437612 | None:intergenic |
| GAAGGGTCCTCTTCCTTTCG+TGG | 0.463401 | 7.4:+11441975 | None:intergenic |
| GTGGTTCTGACCCCGTCGTT+AGG | 0.469886 | 7.4:-11437994 | MS.gene061835:CDS |
| AGCACAGACTAATGGAGAAA+TGG | 0.475455 | 7.4:-11439708 | MS.gene061835:intron |
| TATTGGAAATTGAGTACATA+AGG | 0.486321 | 7.4:-11442007 | MS.gene061835:CDS |
| CTCAGGTACTGTGTGCTGAC+TGG | 0.491291 | 7.4:-11437271 | MS.gene061835:intron |
| ACCCTTCATTACATGATGAC+TGG | 0.492847 | 7.4:-11441959 | MS.gene061835:CDS |
| ATTTGGGATCCTCGTAAGCC+AGG | 0.493346 | 7.4:-11437971 | MS.gene061835:intron |
| AGCGTTGCAGCACAGACTAA+TGG | 0.493660 | 7.4:-11439716 | MS.gene061835:CDS |
| ACCCAGTCATCATGTAATGA+AGG | 0.496996 | 7.4:+11441957 | None:intergenic |
| CTTGGGTTACAACTGTCAAA+TGG | 0.498377 | 7.4:-11437813 | MS.gene061835:CDS |
| CCCTTCATTACATGATGACT+GGG | 0.499109 | 7.4:-11441958 | MS.gene061835:CDS |
| CCTTCCATAGCCTTAGTGTC+CGG | 0.509072 | 7.4:+11439923 | None:intergenic |
| GCTCTTAACTGCCTCGACAT+TGG | 0.517931 | 7.4:-11438046 | MS.gene061835:CDS |
| AACGACGGGGTCAGAACCAC+CGG | 0.522480 | 7.4:+11437997 | None:intergenic |
| TAGTGTCATTGATTTGCCAT+AGG | 0.522663 | 7.4:+11439559 | None:intergenic |
| GGATCCCAAATCCTAACGAC+GGG | 0.525357 | 7.4:+11437983 | None:intergenic |
| TCTAAGAAGAGAAAAGTTGA+AGG | 0.525776 | 7.4:-11439516 | MS.gene061835:CDS |
| AGAAAATGGGATGTTGAGAA+AGG | 0.527515 | 7.4:-11438812 | MS.gene061835:CDS |
| CTTAACTGCCTCGACATTGG+AGG | 0.533061 | 7.4:-11438043 | MS.gene061835:CDS |
| AGGATGGTTGGTAGCCTCCT+CGG | 0.537861 | 7.4:+11439790 | None:intergenic |
| GGGATTGCACCATCAACCTA+TGG | 0.543441 | 7.4:-11439575 | MS.gene061835:CDS |
| CTTCTAAAGACCGGACACTA+AGG | 0.545266 | 7.4:-11439933 | MS.gene061835:CDS |
| TGTAGCCCCACGAAAGGAAG+AGG | 0.550503 | 7.4:-11441982 | MS.gene061835:CDS |
| TTAACTGCCTCGACATTGGA+GGG | 0.552608 | 7.4:-11438042 | MS.gene061835:CDS |
| CGACGTGTACATCACTGTAC+AGG | 0.553749 | 7.4:+11437185 | None:intergenic |
| TCTAACCCTCGCAGGATGGT+TGG | 0.554674 | 7.4:+11439778 | None:intergenic |
| AGTTCTGCTCTGATAGCTGC+CGG | 0.556396 | 7.4:-11438016 | MS.gene061835:CDS |
| TTGTAAGCTCTAACCCTCGC+AGG | 0.558984 | 7.4:+11439770 | None:intergenic |
| AAAAGTTGAAGGTCGAATTG+AGG | 0.564197 | 7.4:-11439505 | MS.gene061835:CDS |
| AAGACCGGACACTAAGGCTA+TGG | 0.564827 | 7.4:-11439927 | MS.gene061835:CDS |
| TAGCTACTGCTTCTAAAGAC+CGG | 0.565042 | 7.4:-11439942 | MS.gene061835:CDS |
| CGCACTGTGTATGGCCTACG+AGG | 0.574218 | 7.4:+11438897 | None:intergenic |
| TTTAGGGTATGGGAAGGTGC+CGG | 0.577302 | 7.4:-11441042 | MS.gene061835:intron |
| TGAGATTCAATGGTTGAAAG+AGG | 0.578162 | 7.4:+11437622 | None:intergenic |
| GTTTGTTCGTATGTCCCTTG+AGG | 0.588519 | 7.4:-11443037 | None:intergenic |
| CCCAGTCATCATGTAATGAA+GGG | 0.590406 | 7.4:+11441958 | None:intergenic |
| ATTATGTACACATATATTGG+AGG | 0.594368 | 7.4:-11441019 | MS.gene061835:CDS |
| TTATGTACACATATATTGGA+GGG | 0.607524 | 7.4:-11441018 | MS.gene061835:CDS |
| TATATAAAAGATCAATACCG+AGG | 0.609462 | 7.4:-11439807 | MS.gene061835:intron |
| AAGGTCTGTAGCCCCACGAA+AGG | 0.615075 | 7.4:-11441988 | MS.gene061835:CDS |
| AACTTTCCCCTCCAATGTCG+AGG | 0.616690 | 7.4:+11438035 | None:intergenic |
| GTAAGTGTCATTAACCCAGA+AGG | 0.621307 | 7.4:-11440973 | MS.gene061835:intron |
| TAGCAAGAAGAAAATCCTCA+AGG | 0.622403 | 7.4:+11443022 | None:intergenic |
| GGCTACCAACCATCCTGCGA+GGG | 0.623304 | 7.4:-11439783 | MS.gene061835:CDS |
| AGCAAGAAGAAAATCCTCAA+GGG | 0.627608 | 7.4:+11443023 | None:intergenic |
| AGGTACTGTGTGCTGACTGG+TGG | 0.628913 | 7.4:-11437268 | MS.gene061835:CDS |
| AGGGTCCTCTTCCTTTCGTG+GGG | 0.629436 | 7.4:+11441977 | None:intergenic |
| AAGCTCTAACCCTCGCAGGA+TGG | 0.633079 | 7.4:+11439774 | None:intergenic |
| CATTGAATCTCACAGTGACA+AGG | 0.637881 | 7.4:-11437611 | MS.gene061835:intron |
| CCGGACACTAAGGCTATGGA+AGG | 0.638818 | 7.4:-11439923 | MS.gene061835:intron |
| TAACTGCCTCGACATTGGAG+GGG | 0.640508 | 7.4:-11438041 | MS.gene061835:CDS |
| AGAGCTTACAAAATCTTGCG+TGG | 0.644410 | 7.4:-11439758 | MS.gene061835:CDS |
| AGTGACAGTGTTATCAGTGG+TGG | 0.677331 | 7.4:-11437242 | MS.gene061835:CDS |
| AGGCTACCAACCATCCTGCG+AGG | 0.682433 | 7.4:-11439784 | MS.gene061835:CDS |
| AGGATCCCAAATCCTAACGA+CGG | 0.689465 | 7.4:+11437982 | None:intergenic |
| TCTGCTCTGATAGCTGCCGG+TGG | 0.691399 | 7.4:-11438013 | MS.gene061835:CDS |
| ATAAAAGATCAATACCGAGG+AGG | 0.705123 | 7.4:-11439804 | MS.gene061835:intron |
| TCTTGCTAAGGGAATCTCTG+CGG | 0.708599 | 7.4:-11443007 | MS.gene061835:intron |
| ATATTGGAGGGACATAGCGA+CGG | 0.722946 | 7.4:-11441006 | MS.gene061835:CDS |
| GCACTGTGTATGGCCTACGA+GGG | 0.729685 | 7.4:+11438898 | None:intergenic |
| AAAAGTGACAGTGTTATCAG+TGG | 0.748664 | 7.4:-11437245 | MS.gene061835:CDS |
| GATCCCAAATCCTAACGACG+GGG | 0.762014 | 7.4:+11437984 | None:intergenic |
| GTTATGGGATCTGAGAACTG+CGG | 0.776202 | 7.4:-11437737 | MS.gene061835:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATACTTGGTTAAAATA+AGG | + | chr7.4:11442520-11442539 | None:intergenic | 15.0% |
| !! | AAATACTATAATACAGTTAT+TGG | + | chr7.4:11437747-11437766 | None:intergenic | 15.0% |
| !! | AAATCTGTTCTTAAAATATA+AGG | + | chr7.4:11437377-11437396 | None:intergenic | 15.0% |
| !! | AAATTGAATAAATTTATGTG+CGG | - | chr7.4:11437329-11437348 | MS.gene061835:intron | 15.0% |
| !! | ATAAATTTGAGTATATCATA+GGG | - | chr7.4:11437600-11437619 | MS.gene061835:intron | 15.0% |
| !! | ATATCGTAATACAAAATATT+TGG | + | chr7.4:11440843-11440862 | None:intergenic | 15.0% |
| !! | ATCATTATTAATATGCTATA+GGG | - | chr7.4:11437638-11437657 | MS.gene061835:intron | 15.0% |
| !! | TAAAATCATTAACAGAAAAA+TGG | + | chr7.4:11438491-11438510 | None:intergenic | 15.0% |
| !! | TATCGTAATACAAAATATTT+GGG | + | chr7.4:11440842-11440861 | None:intergenic | 15.0% |
| !! | TTTCTGTTAAAAATATCTTA+AGG | - | chr7.4:11439368-11439387 | MS.gene061835:intron | 15.0% |
| !!! | AAAACTTATTTTCTTTATAC+TGG | + | chr7.4:11439567-11439586 | None:intergenic | 15.0% |
| !!! | AATATTGAGTAACTATATTT+TGG | + | chr7.4:11440199-11440218 | None:intergenic | 15.0% |
| !!! | ATAAAGAAAATAAGTTTTAG+AGG | - | chr7.4:11439569-11439588 | MS.gene061835:CDS | 15.0% |
| !!! | ATAATACACTGTTTTATTAT+AGG | - | chr7.4:11441287-11441306 | MS.gene061835:intron | 15.0% |
| !!! | ATATGGATTTTTTACATTTT+AGG | - | chr7.4:11439164-11439183 | MS.gene061835:intron | 15.0% |
| !!! | TAATACACTGTTTTATTATA+GGG | - | chr7.4:11441288-11441307 | MS.gene061835:intron | 15.0% |
| !!! | TATGGATTTTTTACATTTTA+GGG | - | chr7.4:11439165-11439184 | MS.gene061835:intron | 15.0% |
| !! | AATAATTAAATGACAAAGCA+CGG | + | chr7.4:11441557-11441576 | None:intergenic | 20.0% |
| !! | AATGTAAAAAATCCATATCA+TGG | + | chr7.4:11439162-11439181 | None:intergenic | 20.0% |
| !! | ACAATATAAGAAGAACAATA+AGG | + | chr7.4:11440778-11440797 | None:intergenic | 20.0% |
| !! | ACCAAAAGTAAAAAAATACT+TGG | + | chr7.4:11442531-11442550 | None:intergenic | 20.0% |
| !! | AGTACAAACATATTAACAAA+GGG | + | chr7.4:11441065-11441084 | None:intergenic | 20.0% |
| !! | ATAAATAAGAAACTCAAACA+TGG | + | chr7.4:11438405-11438424 | None:intergenic | 20.0% |
| !! | ATCTAATAAAATATGACAAC+TGG | + | chr7.4:11439338-11439357 | None:intergenic | 20.0% |
| !! | ATTGACCAAAAAAAATTTCA+AGG | + | chr7.4:11440020-11440039 | None:intergenic | 20.0% |
| !! | CAAAAATAAAATTCTATCAG+AGG | + | chr7.4:11442927-11442946 | None:intergenic | 20.0% |
| !! | CAAATATGTAAAAAGTTAAC+GGG | + | chr7.4:11438563-11438582 | None:intergenic | 20.0% |
| !! | CATAAATTTGAGTATATCAT+AGG | - | chr7.4:11437599-11437618 | MS.gene061835:intron | 20.0% |
| !! | CATCATTATTAATATGCTAT+AGG | - | chr7.4:11437637-11437656 | MS.gene061835:intron | 20.0% |
| !! | CATTAAAAATAAACTCCATA+AGG | + | chr7.4:11438662-11438681 | None:intergenic | 20.0% |
| !! | CTGGAAAATTGATAAAAATA+GGG | - | chr7.4:11437302-11437321 | MS.gene061835:intron | 20.0% |
| !! | GAAGTAAAAATACAAAGTTA+AGG | - | chr7.4:11437768-11437787 | MS.gene061835:CDS | 20.0% |
| !! | GCAAATATGTAAAAAGTTAA+CGG | + | chr7.4:11438564-11438583 | None:intergenic | 20.0% |
| !! | TACTGTGAATGATTAATTAT+AGG | - | chr7.4:11438187-11438206 | MS.gene061835:intron | 20.0% |
| !! | TCTGGAAAATTGATAAAAAT+AGG | - | chr7.4:11437301-11437320 | MS.gene061835:intron | 20.0% |
| !! | TGAATGATTAATTATAGGAA+AGG | - | chr7.4:11438192-11438211 | MS.gene061835:intron | 20.0% |
| !! | TGGAAAATTGATAAAAATAG+GGG | - | chr7.4:11437303-11437322 | MS.gene061835:intron | 20.0% |
| !! | TTAATTATAGGAAAGGATAT+TGG | - | chr7.4:11438199-11438218 | MS.gene061835:intron | 20.0% |
| !!! | AAAGTATTTATCATTGATCT+TGG | + | chr7.4:11440103-11440122 | None:intergenic | 20.0% |
| !!! | AAATACTTTATGATTTTAGC+TGG | - | chr7.4:11440114-11440133 | MS.gene061835:intron | 20.0% |
| !!! | AACAAGTTATACTGATTTTT+TGG | + | chr7.4:11441930-11441949 | None:intergenic | 20.0% |
| !!! | AACTATTCATTATTTTTTGC+AGG | - | chr7.4:11438997-11439016 | MS.gene061835:intron | 20.0% |
| !!! | ACCAAGTATTTTTTTACTTT+TGG | - | chr7.4:11442527-11442546 | MS.gene061835:intron | 20.0% |
| !!! | AGATTTTGTTTGATAACATA+GGG | - | chr7.4:11438606-11438625 | MS.gene061835:intron | 20.0% |
| !!! | ATTTTATTTTTGTTCAACTC+AGG | - | chr7.4:11442935-11442954 | MS.gene061835:intron | 20.0% |
| !!! | ATTTTTTACATTTTAGGGTA+TGG | - | chr7.4:11439170-11439189 | MS.gene061835:intron | 20.0% |
| !!! | CTTTTTCTTCTTATACATAA+TGG | + | chr7.4:11441013-11441032 | None:intergenic | 20.0% |
| !!! | GATTTCCTTGAAATTTTTTT+TGG | - | chr7.4:11440012-11440031 | MS.gene061835:intron | 20.0% |
| !!! | TATGGAGTTTATTTTTAATG+TGG | - | chr7.4:11438662-11438681 | MS.gene061835:intron | 20.0% |
| !!! | TTTCTTTCTATGTTTTAGAA+GGG | - | chr7.4:11442643-11442662 | MS.gene061835:intron | 20.0% |
| !!! | TTTTTTACATTTTAGGGTAT+GGG | - | chr7.4:11439171-11439190 | MS.gene061835:intron | 20.0% |
| ! | AAAAATGATAGGTTCATAAC+AGG | + | chr7.4:11441811-11441830 | None:intergenic | 25.0% |
| ! | AAAGAATGATCTATCCAAAA+AGG | + | chr7.4:11441238-11441257 | None:intergenic | 25.0% |
| ! | AAAGTTAATTTAAGCAAGTG+CGG | - | chr7.4:11438521-11438540 | MS.gene061835:intron | 25.0% |
| ! | AAGAATGATCTATCCAAAAA+GGG | + | chr7.4:11441237-11441256 | None:intergenic | 25.0% |
| ! | AAGACTGAAACTATTTGAAA+AGG | - | chr7.4:11441101-11441120 | MS.gene061835:intron | 25.0% |
| ! | AATGATAAAAACGTTAACAG+TGG | + | chr7.4:11438822-11438841 | None:intergenic | 25.0% |
| ! | AGCTTAAAATTCATAGTGAA+GGG | + | chr7.4:11438970-11438989 | None:intergenic | 25.0% |
| ! | AGTTAAAATTACAGTGTCAA+GGG | + | chr7.4:11438880-11438899 | None:intergenic | 25.0% |
| ! | ATGAAAATGTTCACATCATT+TGG | + | chr7.4:11439507-11439526 | None:intergenic | 25.0% |
| ! | ATGATAAAAACGTTAACAGT+GGG | + | chr7.4:11438821-11438840 | None:intergenic | 25.0% |
| ! | ATTATGTACACATATATTGG+AGG | - | chr7.4:11439204-11439223 | MS.gene061835:intron | 25.0% |
| ! | CAATATATGTGTACATAATC+CGG | + | chr7.4:11439203-11439222 | None:intergenic | 25.0% |
| ! | CAGTACAAACATATTAACAA+AGG | + | chr7.4:11441066-11441085 | None:intergenic | 25.0% |
| ! | GGATCATTCTATTAGAAAAT+GGG | - | chr7.4:11441398-11441417 | MS.gene061835:intron | 25.0% |
| ! | TAACTGTATAAGTTACGATA+CGG | - | chr7.4:11439403-11439422 | MS.gene061835:intron | 25.0% |
| ! | TATATAAAAGATCAATACCG+AGG | - | chr7.4:11440416-11440435 | MS.gene061835:intron | 25.0% |
| ! | TATTGGAAATTGAGTACATA+AGG | - | chr7.4:11438216-11438235 | MS.gene061835:intron | 25.0% |
| ! | TCATAATCATAGCAAGAATA+AGG | + | chr7.4:11441763-11441782 | None:intergenic | 25.0% |
| ! | TGAAAATGTTCACATCATTT+GGG | + | chr7.4:11439506-11439525 | None:intergenic | 25.0% |
| ! | TGTGTGAAGATTAAAAGAAT+GGG | + | chr7.4:11438122-11438141 | None:intergenic | 25.0% |
| ! | TTAATTATTTGCGTGCAAAT+AGG | - | chr7.4:11441568-11441587 | MS.gene061835:intron | 25.0% |
| ! | TTAGATACTACACTTATTAC+AGG | + | chr7.4:11438723-11438742 | None:intergenic | 25.0% |
| ! | TTATGTACACATATATTGGA+GGG | - | chr7.4:11439205-11439224 | MS.gene061835:intron | 25.0% |
| ! | TTGTGTGAAGATTAAAAGAA+TGG | + | chr7.4:11438123-11438142 | None:intergenic | 25.0% |
| ! | TTTCATTAACCAATGTCTAT+GGG | - | chr7.4:11438795-11438814 | MS.gene061835:CDS | 25.0% |
| !! | AAATTGTTTCTTGTAAACCT+TGG | - | chr7.4:11437900-11437919 | MS.gene061835:intron | 25.0% |
| !! | ACTGTTAACGTTTTTATCAT+TGG | - | chr7.4:11438821-11438840 | MS.gene061835:CDS | 25.0% |
| !! | ATTGAACTTTTACCATGATA+TGG | - | chr7.4:11439147-11439166 | MS.gene061835:intron | 25.0% |
| !! | CTGTTAACGTTTTTATCATT+GGG | - | chr7.4:11438822-11438841 | MS.gene061835:CDS | 25.0% |
| !! | GAGAAGAAAACAGAATTTTA+GGG | - | chr7.4:11439789-11439808 | MS.gene061835:CDS | 25.0% |
| !! | TCAAAATTTGTTCTGTAATC+AGG | - | chr7.4:11440241-11440260 | MS.gene061835:intron | 25.0% |
| !! | TGAGAAGAAAACAGAATTTT+AGG | - | chr7.4:11439788-11439807 | MS.gene061835:CDS | 25.0% |
| !! | TTTGGTGTAATTATTTCGTT+GGG | - | chr7.4:11442545-11442564 | MS.gene061835:intron | 25.0% |
| !!! | AAGTTATACTGATTTTTTGG+TGG | + | chr7.4:11441927-11441946 | None:intergenic | 25.0% |
| !!! | ATGATTAGTTTTTCACCTTA+TGG | - | chr7.4:11438644-11438663 | MS.gene061835:intron | 25.0% |
| !!! | CAGAACAAATTTTGATAACT+TGG | + | chr7.4:11440236-11440255 | None:intergenic | 25.0% |
| !!! | CTTTCTTTCTATGTTTTAGA+AGG | - | chr7.4:11442642-11442661 | MS.gene061835:intron | 25.0% |
| !!! | GAGATTTTGTTTGATAACAT+AGG | - | chr7.4:11438605-11438624 | MS.gene061835:intron | 25.0% |
| !!! | TTCTTTCTATGTTTTAGAAG+GGG | - | chr7.4:11442644-11442663 | MS.gene061835:intron | 25.0% |
| !!! | TTTGGTTTAGTTTTTCAATC+CGG | - | chr7.4:11438026-11438045 | MS.gene061835:CDS | 25.0% |
| !!! | TTTTGGTGTAATTATTTCGT+TGG | - | chr7.4:11442544-11442563 | MS.gene061835:intron | 25.0% |
| AAAATGTTCACATCATTTGG+GGG | + | chr7.4:11439504-11439523 | None:intergenic | 30.0% | |
| AAATATCAGTCACTATTGAC+TGG | - | chr7.4:11439980-11439999 | MS.gene061835:intron | 30.0% | |
| AAGAGAAGACATACCATTTA+GGG | - | chr7.4:11439736-11439755 | MS.gene061835:CDS | 30.0% | |
| AAGGAATTGTTTATGCCTTA+TGG | - | chr7.4:11437787-11437806 | MS.gene061835:CDS | 30.0% | |
| AATGTTATTGCATTGTGGTT+TGG | + | chr7.4:11439931-11439950 | None:intergenic | 30.0% | |
| ATCAGAGACAAACATAATGA+TGG | + | chr7.4:11438147-11438166 | None:intergenic | 30.0% | |
| ATGATTTAGCCTATCCATAA+CGG | - | chr7.4:11438378-11438397 | MS.gene061835:intron | 30.0% | |
| CAATCAACATGAGATATAAC+AGG | + | chr7.4:11437475-11437494 | None:intergenic | 30.0% | |
| CAATGCAATAACATTTCATG+TGG | - | chr7.4:11439936-11439955 | MS.gene061835:CDS | 30.0% | |
| CAGCTTAAAATTCATAGTGA+AGG | + | chr7.4:11438971-11438990 | None:intergenic | 30.0% | |
| CAGTTAAAATTACAGTGTCA+AGG | + | chr7.4:11438881-11438900 | None:intergenic | 30.0% | |
| CATGAAATGTTATTGCATTG+TGG | + | chr7.4:11439936-11439955 | None:intergenic | 30.0% | |
| CGGATTATGTACACATATAT+TGG | - | chr7.4:11439201-11439220 | MS.gene061835:intron | 30.0% | |
| GAAAATGTTCACATCATTTG+GGG | + | chr7.4:11439505-11439524 | None:intergenic | 30.0% | |
| GACAATGCATAATATATGCA+AGG | - | chr7.4:11441880-11441899 | MS.gene061835:intron | 30.0% | |
| GAGTTGCATCTTATAAACTT+AGG | - | chr7.4:11437925-11437944 | MS.gene061835:intron | 30.0% | |
| GATTATGAGTTATTCCTAGT+TGG | - | chr7.4:11441784-11441803 | MS.gene061835:intron | 30.0% | |
| GCATAGCTAATTTCATGAAA+TGG | + | chr7.4:11439458-11439477 | None:intergenic | 30.0% | |
| GCTTAAAATTCATAGTGAAG+GGG | + | chr7.4:11438969-11438988 | None:intergenic | 30.0% | |
| GGGATCATTCTATTAGAAAA+TGG | - | chr7.4:11441397-11441416 | MS.gene061835:intron | 30.0% | |
| GTACATGATTAAACAACTTC+TGG | + | chr7.4:11437713-11437732 | None:intergenic | 30.0% | |
| GTCAATAGTGACTGATATTT+CGG | + | chr7.4:11439980-11439999 | None:intergenic | 30.0% | |
| GTTGAATACTTGTTTCAAAC+TGG | - | chr7.4:11437432-11437451 | MS.gene061835:intron | 30.0% | |
| GTTTCATTAACCAATGTCTA+TGG | - | chr7.4:11438794-11438813 | MS.gene061835:CDS | 30.0% | |
| TAATACCAACAAAGAAGTGA+AGG | + | chr7.4:11442046-11442065 | None:intergenic | 30.0% | |
| TACTTTCTGCATCTTATGAT+GGG | - | chr7.4:11442455-11442474 | MS.gene061835:intron | 30.0% | |
| TCTAAGAAGAGAAAAGTTGA+AGG | - | chr7.4:11440707-11440726 | MS.gene061835:intron | 30.0% | |
| TGATGGGAAAGTTATGTTAT+GGG | - | chr7.4:11442471-11442490 | MS.gene061835:intron | 30.0% | |
| TGTTAATATGTTTGTACTGC+TGG | - | chr7.4:11441067-11441086 | MS.gene061835:intron | 30.0% | |
| TTACTTTCTGCATCTTATGA+TGG | - | chr7.4:11442454-11442473 | MS.gene061835:intron | 30.0% | |
| TTGAAAAACTAAACCAAACC+AGG | + | chr7.4:11438024-11438043 | None:intergenic | 30.0% | |
| ! | AAATTTTGCAATTTTGCAGC+AGG | + | chr7.4:11439298-11439317 | None:intergenic | 30.0% |
| ! | AAGCAGTTTAAATTTTCTGC+AGG | - | chr7.4:11442349-11442368 | MS.gene061835:intron | 30.0% |
| ! | AATTTTGTCTTCATACCTTC+TGG | + | chr7.4:11439268-11439287 | None:intergenic | 30.0% |
| ! | ATGATGGGAAAGTTATGTTA+TGG | - | chr7.4:11442470-11442489 | MS.gene061835:intron | 30.0% |
| ! | ATTTTGTCTTCATACCTTCT+GGG | + | chr7.4:11439267-11439286 | None:intergenic | 30.0% |
| ! | GCATGATTCATCATTGATTA+AGG | - | chr7.4:11437509-11437528 | MS.gene061835:intron | 30.0% |
| ! | GGTAATTTAGAACTGGATTA+GGG | - | chr7.4:11441593-11441612 | MS.gene061835:intron | 30.0% |
| ! | TGGTAATTTAGAACTGGATT+AGG | - | chr7.4:11441592-11441611 | MS.gene061835:intron | 30.0% |
| !! | AAGCATTGGCTATAATTTGA+GGG | - | chr7.4:11439840-11439859 | MS.gene061835:intron | 30.0% |
| !! | ACATACCATTTAGGGTTTTT+AGG | - | chr7.4:11439744-11439763 | MS.gene061835:CDS | 30.0% |
| !! | ATACCATTTAGGGTTTTTAG+GGG | - | chr7.4:11439746-11439765 | MS.gene061835:CDS | 30.0% |
| !! | ATATCTATTCTAGCTCCTAA+GGG | - | chr7.4:11440859-11440878 | MS.gene061835:intron | 30.0% |
| !! | CATACCATTTAGGGTTTTTA+GGG | - | chr7.4:11439745-11439764 | MS.gene061835:CDS | 30.0% |
| !! | TGACTAAATTTTGACAGCTA+AGG | + | chr7.4:11437869-11437888 | None:intergenic | 30.0% |
| !!! | AATAAGTTTTAGAGGAGTGT+TGG | - | chr7.4:11439577-11439596 | MS.gene061835:CDS | 30.0% |
| !!! | ATTTTGAGTTTCTACACACT+TGG | - | chr7.4:11440555-11440574 | MS.gene061835:intron | 30.0% |
| !!! | CCAATGCTTCTGTTTTTTAT+GGG | + | chr7.4:11439829-11439848 | None:intergenic | 30.0% |
| !!! | CTTTTGTTTTAATTGATGCG+TGG | - | chr7.4:11440913-11440932 | MS.gene061835:intron | 30.0% |
| !!! | GAAGTATTTTGTAGTCTTGT+TGG | - | chr7.4:11438849-11438868 | MS.gene061835:CDS | 30.0% |
| !!! | GGAGTTTATTTTTAATGTGG+TGG | - | chr7.4:11438665-11438684 | MS.gene061835:intron | 30.0% |
| !!! | GTTTATTTTTAATGTGGTGG+AGG | - | chr7.4:11438668-11438687 | MS.gene061835:intron | 30.0% |
| !!! | TTATACTGATTTTTTGGTGG+TGG | + | chr7.4:11441924-11441943 | None:intergenic | 30.0% |
| !!! | TTGGTTTAGTTTTTCAATCC+GGG | - | chr7.4:11438027-11438046 | MS.gene061835:CDS | 30.0% |
| !!! | TTTTGCAGGTTTATTTTGAC+AGG | - | chr7.4:11439011-11439030 | MS.gene061835:intron | 30.0% |
| !!! | TTTTTTGCTCTTTCCCTTTT+TGG | - | chr7.4:11441221-11441240 | MS.gene061835:intron | 30.0% |
| AAAAGTGACAGTGTTATCAG+TGG | - | chr7.4:11442978-11442997 | MS.gene061835:intron | 35.0% | |
| AAAAGTTGAAGGTCGAATTG+AGG | - | chr7.4:11440718-11440737 | MS.gene061835:intron | 35.0% | |
| AAAATTACAGTGTCAAGGGT+TGG | + | chr7.4:11438876-11438895 | None:intergenic | 35.0% | |
| AAATGTTCACATCATTTGGG+GGG | + | chr7.4:11439503-11439522 | None:intergenic | 35.0% | |
| AACAAAATCTCCAATCACTC+CGG | + | chr7.4:11438596-11438615 | None:intergenic | 35.0% | |
| AAGAAGAACAATAAGGTGCA+AGG | + | chr7.4:11440771-11440790 | None:intergenic | 35.0% | |
| AATTGAGGACTCTCAATTAG+AGG | - | chr7.4:11440733-11440752 | MS.gene061835:intron | 35.0% | |
| ACTCTTACCTTTATTACTGC+TGG | - | chr7.4:11438427-11438446 | MS.gene061835:intron | 35.0% | |
| AGAAAATGGGATGTTGAGAA+AGG | - | chr7.4:11441411-11441430 | MS.gene061835:intron | 35.0% | |
| AGCAAGAAGAAAATCCTCAA+GGG | + | chr7.4:11437203-11437222 | None:intergenic | 35.0% | |
| AGTCAATCTATTCTGCATCT+TGG | - | chr7.4:11441376-11441395 | MS.gene061835:intron | 35.0% | |
| ATAAAAGATCAATACCGAGG+AGG | - | chr7.4:11440419-11440438 | MS.gene061835:intron | 35.0% | |
| ATAACTTATGTTCCTTGCAG+TGG | - | chr7.4:11442578-11442597 | MS.gene061835:intron | 35.0% | |
| ATTTGTTCTGTAATCAGGCA+TGG | - | chr7.4:11440246-11440265 | MS.gene061835:intron | 35.0% | |
| CAATATCCTATTTCAGTCTC+TGG | + | chr7.4:11438086-11438105 | None:intergenic | 35.0% | |
| CATTGTCAAATAGCAGTTAG+TGG | - | chr7.4:11442769-11442788 | MS.gene061835:intron | 35.0% | |
| CTGCAAGGAACATAAGTTAT+TGG | + | chr7.4:11442578-11442597 | None:intergenic | 35.0% | |
| GAAAGTTTGATAGAGAAGTG+TGG | + | chr7.4:11438766-11438785 | None:intergenic | 35.0% | |
| GAAATTCCAGAGACTGAAAT+AGG | - | chr7.4:11438077-11438096 | MS.gene061835:intron | 35.0% | |
| GAAGAGAAGACATACCATTT+AGG | - | chr7.4:11439735-11439754 | MS.gene061835:CDS | 35.0% | |
| GCGTGGAATAGTAAAATCTA+AGG | - | chr7.4:11440930-11440949 | MS.gene061835:intron | 35.0% | |
| GCTTAATAAGATACCGATAC+CGG | + | chr7.4:11442333-11442352 | None:intergenic | 35.0% | |
| GTCAATCTATTCTGCATCTT+GGG | - | chr7.4:11441377-11441396 | MS.gene061835:intron | 35.0% | |
| GTTTGCTTCTCATACTTCTT+GGG | - | chr7.4:11442393-11442412 | MS.gene061835:intron | 35.0% | |
| TACTACACTTATTACAGGCA+AGG | + | chr7.4:11438718-11438737 | None:intergenic | 35.0% | |
| TAGCAAGAAGAAAATCCTCA+AGG | + | chr7.4:11437204-11437223 | None:intergenic | 35.0% | |
| TATGCTATAGGGTTTGATTC+TGG | - | chr7.4:11437649-11437668 | MS.gene061835:intron | 35.0% | |
| TCGCTAATCGCAGAAAATAA+CGG | + | chr7.4:11442831-11442850 | None:intergenic | 35.0% | |
| TGAGAAGCAAACTGAAAAAC+AGG | + | chr7.4:11442385-11442404 | None:intergenic | 35.0% | |
| TGAGATTCAATGGTTGAAAG+AGG | + | chr7.4:11442604-11442623 | None:intergenic | 35.0% | |
| TGCATAATATATGCAAGGTC+CGG | - | chr7.4:11441885-11441904 | MS.gene061835:intron | 35.0% | |
| ! | ACATCTTTGATTTACCCAAG+AGG | - | chr7.4:11442888-11442907 | MS.gene061835:intron | 35.0% |
| ! | ACTTTGAGGAGTTATTGCTA+GGG | - | chr7.4:11439610-11439629 | MS.gene061835:intron | 35.0% |
| ! | AGTTTGCTTCTCATACTTCT+TGG | - | chr7.4:11442392-11442411 | MS.gene061835:intron | 35.0% |
| ! | ATAGGCTGGTAATTTAGAAC+TGG | - | chr7.4:11441586-11441605 | MS.gene061835:intron | 35.0% |
| ! | CCCATAAAAAACAGAAGCAT+TGG | - | chr7.4:11439826-11439845 | MS.gene061835:intron | 35.0% |
| ! | CTATAGAAGTAGTCTTGAAC+TGG | - | chr7.4:11437404-11437423 | MS.gene061835:intron | 35.0% |
| ! | GAATAGATTGACTCTCTTTG+TGG | + | chr7.4:11441369-11441388 | None:intergenic | 35.0% |
| ! | GAGGATTTTCTTCTTGCTAA+GGG | - | chr7.4:11437205-11437224 | MS.gene061835:CDS | 35.0% |
| ! | GAGTTTGATGACAGTTGAAT+AGG | - | chr7.4:11437993-11438012 | MS.gene061835:CDS | 35.0% |
| ! | GTTTTCCTTCACTTCTTTGT+TGG | - | chr7.4:11442038-11442057 | MS.gene061835:intron | 35.0% |
| ! | TACTTTGAGGAGTTATTGCT+AGG | - | chr7.4:11439609-11439628 | MS.gene061835:intron | 35.0% |
| ! | TGAGGATTTTCTTCTTGCTA+AGG | - | chr7.4:11437204-11437223 | MS.gene061835:CDS | 35.0% |
| ! | TTTGCTTCATTTTACTGACC+TGG | + | chr7.4:11442273-11442292 | None:intergenic | 35.0% |
| !! | ATTGATTTGCCATAGGTTGA+TGG | + | chr7.4:11440660-11440679 | None:intergenic | 35.0% |
| !! | ATTTTGACAGGCTGTTATGA+TGG | - | chr7.4:11439023-11439042 | MS.gene061835:intron | 35.0% |
| !! | GAAGCATTGGCTATAATTTG+AGG | - | chr7.4:11439839-11439858 | MS.gene061835:intron | 35.0% |
| !! | GATATCTATTCTAGCTCCTA+AGG | - | chr7.4:11440858-11440877 | MS.gene061835:intron | 35.0% |
| !! | GTTTTTAGGGGAAGAACAAA+GGG | - | chr7.4:11439758-11439777 | MS.gene061835:CDS | 35.0% |
| !! | TAGTGTCATTGATTTGCCAT+AGG | + | chr7.4:11440667-11440686 | None:intergenic | 35.0% |
| !! | TATCTATTCTAGCTCCTAAG+GGG | - | chr7.4:11440860-11440879 | MS.gene061835:intron | 35.0% |
| !!! | ATGATGGTTTTGGAAGGTAA+TGG | - | chr7.4:11439039-11439058 | MS.gene061835:intron | 35.0% |
| !!! | GCCAATGCTTCTGTTTTTTA+TGG | + | chr7.4:11439830-11439849 | None:intergenic | 35.0% |
| !!! | TCCTCTGTGTATAGTTTTGT+GGG | - | chr7.4:11442151-11442170 | MS.gene061835:intron | 35.0% |
| !!! | TTACATTTTAGGGTATGGGA+AGG | - | chr7.4:11439175-11439194 | MS.gene061835:intron | 35.0% |
| AAACATGGACCGTTATGGAT+AGG | + | chr7.4:11438390-11438409 | None:intergenic | 40.0% | |
| AACATTTCATGTGGCACCTA+GGG | - | chr7.4:11439945-11439964 | MS.gene061835:CDS | 40.0% | |
| AACTCAAACATGGACCGTTA+TGG | + | chr7.4:11438395-11438414 | None:intergenic | 40.0% | |
| ACAATCATGTATGCCGGTAT+CGG | - | chr7.4:11442317-11442336 | MS.gene061835:intron | 40.0% | |
| ACATATTTGCCGACAATGAC+CGG | - | chr7.4:11438574-11438593 | MS.gene061835:intron | 40.0% | |
| ACCATGGATATCAAATGTCG+AGG | - | chr7.4:11437815-11437834 | MS.gene061835:CDS | 40.0% | |
| ACCCAGTCATCATGTAATGA+AGG | + | chr7.4:11438269-11438288 | None:intergenic | 40.0% | |
| ACCCTTCATTACATGATGAC+TGG | - | chr7.4:11438264-11438283 | MS.gene061835:intron | 40.0% | |
| ACCTCGACATTTGATATCCA+TGG | + | chr7.4:11437819-11437838 | None:intergenic | 40.0% | |
| AGAGCTTACAAAATCTTGCG+TGG | - | chr7.4:11440465-11440484 | MS.gene061835:intron | 40.0% | |
| AGCACAGACTAATGGAGAAA+TGG | - | chr7.4:11440515-11440534 | MS.gene061835:intron | 40.0% | |
| AGCTAAGGTTGTCAACTTGT+AGG | + | chr7.4:11437854-11437873 | None:intergenic | 40.0% | |
| ATCCGGGAATCTGAATATTG+TGG | - | chr7.4:11438043-11438062 | MS.gene061835:CDS | 40.0% | |
| CACTTATTACAGGCAAGGTT+AGG | + | chr7.4:11438713-11438732 | None:intergenic | 40.0% | |
| CATTGAATCTCACAGTGACA+AGG | - | chr7.4:11442612-11442631 | MS.gene061835:intron | 40.0% | |
| CCCAGTCATCATGTAATGAA+GGG | + | chr7.4:11438268-11438287 | None:intergenic | 40.0% | |
| CCCTTCATTACATGATGACT+GGG | - | chr7.4:11438265-11438284 | MS.gene061835:intron | 40.0% | |
| CCTTTATTACTGCTGGCAAT+CGG | - | chr7.4:11438434-11438453 | MS.gene061835:intron | 40.0% | |
| CTTCCCCTAAAAACCCTAAA+TGG | + | chr7.4:11439752-11439771 | None:intergenic | 40.0% | |
| CTTGGGTTACAACTGTCAAA+TGG | - | chr7.4:11442410-11442429 | MS.gene061835:intron | 40.0% | |
| CTTGTCACTGTGAGATTCAA+TGG | + | chr7.4:11442614-11442633 | None:intergenic | 40.0% | |
| GCATAATATATGCAAGGTCC+GGG | - | chr7.4:11441886-11441905 | MS.gene061835:intron | 40.0% | |
| GCTGTGATATCGTTTGTTTC+TGG | - | chr7.4:11437283-11437302 | MS.gene061835:intron | 40.0% | |
| GTGCTGCATGAAAAAACAAG+GGG | + | chr7.4:11440991-11441010 | None:intergenic | 40.0% | |
| TAACATTTCATGTGGCACCT+AGG | - | chr7.4:11439944-11439963 | MS.gene061835:CDS | 40.0% | |
| TATAAGATGCAACTCTGCCA+AGG | + | chr7.4:11437920-11437939 | None:intergenic | 40.0% | |
| TATCCATGGTCACAACCATA+AGG | + | chr7.4:11437805-11437824 | None:intergenic | 40.0% | |
| TCCCACAAAACTATACACAG+AGG | + | chr7.4:11442155-11442174 | None:intergenic | 40.0% | |
| TCCCACAATATTCAGATTCC+CGG | + | chr7.4:11438048-11438067 | None:intergenic | 40.0% | |
| TCCGGGAATCTGAATATTGT+GGG | - | chr7.4:11438044-11438063 | MS.gene061835:CDS | 40.0% | |
| TCTCAATTAGAGGTTCGTAC+AGG | - | chr7.4:11440743-11440762 | MS.gene061835:intron | 40.0% | |
| TGAGCTTAGCTCAGTTGTTA+AGG | - | chr7.4:11441858-11441877 | MS.gene061835:intron | 40.0% | |
| TGTATAAGTTACGATACGGC+TGG | - | chr7.4:11439407-11439426 | MS.gene061835:intron | 40.0% | |
| TTATTTGCGTGCAAATAGGC+TGG | - | chr7.4:11441572-11441591 | MS.gene061835:intron | 40.0% | |
| TTCTCTTTGTGCAATCCTCT+CGG | + | chr7.4:11439677-11439696 | None:intergenic | 40.0% | |
| TTGGATGCTGCATTACTTTG+AGG | - | chr7.4:11439596-11439615 | MS.gene061835:intron | 40.0% | |
| ! | ACAGGCTGTTATGATGGTTT+TGG | - | chr7.4:11439029-11439048 | MS.gene061835:intron | 40.0% |
| ! | CTTTGAGGAGTTATTGCTAG+GGG | - | chr7.4:11439611-11439630 | MS.gene061835:intron | 40.0% |
| ! | GGTGCTGCATGAAAAAACAA+GGG | + | chr7.4:11440992-11441011 | None:intergenic | 40.0% |
| ! | GTAAGTGTCATTAACCCAGA+AGG | - | chr7.4:11439250-11439269 | MS.gene061835:intron | 40.0% |
| ! | TAGCTACTGCTTCTAAAGAC+CGG | - | chr7.4:11440281-11440300 | MS.gene061835:intron | 40.0% |
| ! | TCACATGATCAGGTTTGTTC+TGG | - | chr7.4:11440620-11440639 | MS.gene061835:intron | 40.0% |
| ! | TCTTTGATTTACCCAAGAGG+AGG | - | chr7.4:11442891-11442910 | MS.gene061835:intron | 40.0% |
| ! | TTTGCAATTTTGCAGCAGGA+GGG | + | chr7.4:11439294-11439313 | None:intergenic | 40.0% |
| ! | TTTTGCAATTTTGCAGCAGG+AGG | + | chr7.4:11439295-11439314 | None:intergenic | 40.0% |
| !! | ATCAGGTTTGTTCTGGTTCT+TGG | - | chr7.4:11440627-11440646 | MS.gene061835:intron | 40.0% |
| !! | CTGTTGATGGTTCTTCTTCT+CGG | - | chr7.4:11438294-11438313 | MS.gene061835:intron | 40.0% |
| !! | GGTTTTTAGGGGAAGAACAA+AGG | - | chr7.4:11439757-11439776 | MS.gene061835:CDS | 40.0% |
| !! | GTCCTCTGTGTATAGTTTTG+TGG | - | chr7.4:11442150-11442169 | MS.gene061835:intron | 40.0% |
| !! | TCAGGTTTGTTCTGGTTCTT+GGG | - | chr7.4:11440628-11440647 | MS.gene061835:intron | 40.0% |
| !! | TGGTGCTGCATGAAAAAACA+AGG | + | chr7.4:11440993-11441012 | None:intergenic | 40.0% |
| !!! | CTGTGTATAGTTTTGTGGGA+AGG | - | chr7.4:11442155-11442174 | MS.gene061835:intron | 40.0% |
| !!! | GCTGTTATGATGGTTTTGGA+AGG | - | chr7.4:11439033-11439052 | MS.gene061835:intron | 40.0% |
| AACAACTGAGCTAAGCTCAC+AGG | + | chr7.4:11441857-11441876 | None:intergenic | 45.0% | |
| ACAACTGAGCTAAGCTCACA+GGG | + | chr7.4:11441856-11441875 | None:intergenic | 45.0% | |
| ACAGTTGAATAGGTCTGTCC+TGG | - | chr7.4:11438003-11438022 | MS.gene061835:CDS | 45.0% | |
| ACATTTCATGTGGCACCTAG+GGG | - | chr7.4:11439946-11439965 | MS.gene061835:CDS | 45.0% | |
| ACCCAAGAGGAGGACTAAAA+TGG | - | chr7.4:11442901-11442920 | MS.gene061835:intron | 45.0% | |
| AGCACAGCAAACTCAACAAG+TGG | + | chr7.4:11440963-11440982 | None:intergenic | 45.0% | |
| AGGATCCCAAATCCTAACGA+CGG | + | chr7.4:11442244-11442263 | None:intergenic | 45.0% | |
| AGTGACAGTGTTATCAGTGG+TGG | - | chr7.4:11442981-11443000 | MS.gene061835:intron | 45.0% | |
| AGTGCGTGTCTTCTGTGATT+TGG | - | chr7.4:11441343-11441362 | MS.gene061835:intron | 45.0% | |
| ATATTGGAGGGACATAGCGA+CGG | - | chr7.4:11439217-11439236 | MS.gene061835:intron | 45.0% | |
| ATGCCTTATGGTTGTGACCA+TGG | - | chr7.4:11437799-11437818 | MS.gene061835:CDS | 45.0% | |
| CCGATTGCCAGCAGTAATAA+AGG | + | chr7.4:11438437-11438456 | None:intergenic | 45.0% | |
| CCGGCATACATGATTGTCTA+CGG | + | chr7.4:11442314-11442333 | None:intergenic | 45.0% | |
| CCGTAGACAATCATGTATGC+CGG | - | chr7.4:11442311-11442330 | MS.gene061835:intron | 45.0% | |
| CTCTTCGTGCAACTTTCAAG+TGG | + | chr7.4:11439721-11439740 | None:intergenic | 45.0% | |
| GAGGATTGCACAAAGAGAAG+AGG | - | chr7.4:11439678-11439697 | MS.gene061835:intron | 45.0% | |
| GATTGTCTACGGAGGTTAGA+GGG | + | chr7.4:11442303-11442322 | None:intergenic | 45.0% | |
| GCACAGCAAACTCAACAAGT+GGG | + | chr7.4:11440962-11440981 | None:intergenic | 45.0% | |
| GCATACATGATTGTCTACGG+AGG | + | chr7.4:11442311-11442330 | None:intergenic | 45.0% | |
| GGTTCATAACAGGACCAACT+AGG | + | chr7.4:11441801-11441820 | None:intergenic | 45.0% | |
| GTTATGGGATCTGAGAACTG+CGG | - | chr7.4:11442486-11442505 | MS.gene061835:intron | 45.0% | |
| GTTTCACTCACACTTGATCG+AGG | - | chr7.4:11441990-11442009 | MS.gene061835:CDS | 45.0% | |
| TATTGCTAGGGGTTGGAACT+TGG | - | chr7.4:11439622-11439641 | MS.gene061835:intron | 45.0% | |
| TCATAGTGAAGGGGACATTC+AGG | + | chr7.4:11438960-11438979 | None:intergenic | 45.0% | |
| TCTTGCTAAGGGAATCTCTG+CGG | - | chr7.4:11437216-11437235 | MS.gene061835:CDS | 45.0% | |
| TGAATAGGTCTGTCCTGGTT+TGG | - | chr7.4:11438008-11438027 | MS.gene061835:CDS | 45.0% | |
| TGACTGATATTTCGGCGTAG+TGG | + | chr7.4:11439972-11439991 | None:intergenic | 45.0% | |
| TGATTGTCTACGGAGGTTAG+AGG | + | chr7.4:11442304-11442323 | None:intergenic | 45.0% | |
| TGTTTGTACTGCTGGAAGTC+TGG | - | chr7.4:11441075-11441094 | MS.gene061835:intron | 45.0% | |
| TTAACTGCCTCGACATTGGA+GGG | - | chr7.4:11442181-11442200 | MS.gene061835:intron | 45.0% | |
| ! | AGGGGAAGAACAAAGGGTTT+TGG | - | chr7.4:11439764-11439783 | MS.gene061835:CDS | 45.0% |
| ! | CTTCTAAAGACCGGACACTA+AGG | - | chr7.4:11440290-11440309 | MS.gene061835:intron | 45.0% |
| ! | GAAGCTTTTACAACCCTCGT+AGG | - | chr7.4:11441312-11441331 | MS.gene061835:intron | 45.0% |
| ! | TGCATTGTGGTTTGGAGTAG+TGG | + | chr7.4:11439923-11439942 | None:intergenic | 45.0% |
| ! | TTGCAATTTTGCAGCAGGAG+GGG | + | chr7.4:11439293-11439312 | None:intergenic | 45.0% |
| ! | TTTAATGTGGTGGAGGACTG+TGG | - | chr7.4:11438675-11438694 | MS.gene061835:intron | 45.0% |
| ! | TTTTACTGACCTGGCTTACG+AGG | + | chr7.4:11442264-11442283 | None:intergenic | 45.0% |
| !! | GCCATTTTAGTCCTCCTCTT+GGG | + | chr7.4:11442905-11442924 | None:intergenic | 45.0% |
| !!! | ACTGATTTTTTGGTGGTGGC+CGG | + | chr7.4:11441920-11441939 | None:intergenic | 45.0% |
| !! | TAATTTAATATAAAAATGAT+AGG | + | chr7.4:11441822-11441841 | None:intergenic | 5.0% |
| AACAGTGGGCCCATAGACAT+TGG | + | chr7.4:11438807-11438826 | None:intergenic | 50.0% | |
| AACTTTCCCCTCCAATGTCG+AGG | + | chr7.4:11442191-11442210 | None:intergenic | 50.0% | |
| AAGACCGGACACTAAGGCTA+TGG | - | chr7.4:11440296-11440315 | MS.gene061835:intron | 50.0% | |
| AAGAGGCGACTGCATAGACA+GGG | - | chr7.4:11439695-11439714 | MS.gene061835:intron | 50.0% | |
| AAGGGTCCTCTTCCTTTCGT+GGG | + | chr7.4:11438250-11438269 | None:intergenic | 50.0% | |
| AGCGTTGCAGCACAGACTAA+TGG | - | chr7.4:11440507-11440526 | MS.gene061835:intron | 50.0% | |
| AGTTCTGCTCTGATAGCTGC+CGG | - | chr7.4:11442207-11442226 | MS.gene061835:intron | 50.0% | |
| CAGAAGACACGCACTGTGTA+TGG | + | chr7.4:11441338-11441357 | None:intergenic | 50.0% | |
| CCAATCACTCCGGTCATTGT+CGG | + | chr7.4:11438586-11438605 | None:intergenic | 50.0% | |
| CTCTGCTGTCTCACATGATC+AGG | - | chr7.4:11440610-11440629 | MS.gene061835:intron | 50.0% | |
| CTGATCATGTGAGACAGCAG+AGG | + | chr7.4:11440612-11440631 | None:intergenic | 50.0% | |
| CTTAACTGCCTCGACATTGG+AGG | - | chr7.4:11442180-11442199 | MS.gene061835:intron | 50.0% | |
| GAGGAGTTATTGCTAGGGGT+TGG | - | chr7.4:11439615-11439634 | MS.gene061835:intron | 50.0% | |
| GATCCCAAATCCTAACGACG+GGG | + | chr7.4:11442242-11442261 | None:intergenic | 50.0% | |
| GCTACTATCAACGACCCCTT+AGG | + | chr7.4:11440877-11440896 | None:intergenic | 50.0% | |
| GCTCTTAACTGCCTCGACAT+TGG | - | chr7.4:11442177-11442196 | MS.gene061835:intron | 50.0% | |
| GGATCCCAAATCCTAACGAC+GGG | + | chr7.4:11442243-11442262 | None:intergenic | 50.0% | |
| GGGATTGCACCATCAACCTA+TGG | - | chr7.4:11440648-11440667 | MS.gene061835:intron | 50.0% | |
| TAACTGCCTCGACATTGGAG+GGG | - | chr7.4:11442182-11442201 | MS.gene061835:intron | 50.0% | |
| TGACCCCGTCGTTAGGATTT+GGG | - | chr7.4:11442236-11442255 | MS.gene061835:intron | 50.0% | |
| ! | ATTTGGGATCCTCGTAAGCC+AGG | - | chr7.4:11442252-11442271 | MS.gene061835:intron | 50.0% |
| ! | CCTTCCATAGCCTTAGTGTC+CGG | + | chr7.4:11440303-11440322 | None:intergenic | 50.0% |
| ! | TGCAATTTTGCAGCAGGAGG+GGG | + | chr7.4:11439292-11439311 | None:intergenic | 50.0% |
| ! | TTGTAAGCTCTAACCCTCGC+AGG | + | chr7.4:11440456-11440475 | None:intergenic | 50.0% |
| ! | TTTAGGGTATGGGAAGGTGC+CGG | - | chr7.4:11439181-11439200 | MS.gene061835:intron | 50.0% |
| !! | GGCCATTTTAGTCCTCCTCT+TGG | + | chr7.4:11442906-11442925 | None:intergenic | 50.0% |
| !! | TCTCAAAAGCATCACCGACG+TGG | - | chr7.4:11439876-11439895 | MS.gene061835:intron | 50.0% |
| !!! | CTGATTTTTTGGTGGTGGCC+GGG | + | chr7.4:11441919-11441938 | None:intergenic | 50.0% |
| !!! | TGATTTTTTGGTGGTGGCCG+GGG | + | chr7.4:11441918-11441937 | None:intergenic | 50.0% |
| AAGGTCTGTAGCCCCACGAA+AGG | - | chr7.4:11438235-11438254 | MS.gene061835:intron | 55.0% | |
| AGGGTCCTCTTCCTTTCGTG+GGG | + | chr7.4:11438249-11438268 | None:intergenic | 55.0% | |
| AGTGCAGCTAGAGAACCGAG+AGG | - | chr7.4:11439659-11439678 | MS.gene061835:intron | 55.0% | |
| CCGACAATGACCGGAGTGAT+TGG | - | chr7.4:11438583-11438602 | MS.gene061835:intron | 55.0% | |
| CCGGACACTAAGGCTATGGA+AGG | - | chr7.4:11440300-11440319 | MS.gene061835:intron | 55.0% | |
| CTGACCCCGTCGTTAGGATT+TGG | - | chr7.4:11442235-11442254 | MS.gene061835:intron | 55.0% | |
| GAAGAGGCGACTGCATAGAC+AGG | - | chr7.4:11439694-11439713 | MS.gene061835:intron | 55.0% | |
| GAAGGGTCCTCTTCCTTTCG+TGG | + | chr7.4:11438251-11438270 | None:intergenic | 55.0% | |
| GCACTGTGTATGGCCTACGA+GGG | + | chr7.4:11441328-11441347 | None:intergenic | 55.0% | |
| GGTTGAAAGAGGCCACTGCA+AGG | + | chr7.4:11442593-11442612 | None:intergenic | 55.0% | |
| TCTAACCCTCGCAGGATGGT+TGG | + | chr7.4:11440448-11440467 | None:intergenic | 55.0% | |
| TGACAAAGCACGGACGAGCA+AGG | + | chr7.4:11441547-11441566 | None:intergenic | 55.0% | |
| TGTAGCCCCACGAAAGGAAG+AGG | - | chr7.4:11438241-11438260 | MS.gene061835:intron | 55.0% | |
| ! | AAGCTCTAACCCTCGCAGGA+TGG | + | chr7.4:11440452-11440471 | None:intergenic | 55.0% |
| ! | CTCAGGTACTGTGTGCTGAC+TGG | - | chr7.4:11442952-11442971 | MS.gene061835:intron | 55.0% |
| ! | GACTGGGTCAGTGCTGTTGA+TGG | - | chr7.4:11438281-11438300 | MS.gene061835:intron | 55.0% |
| !! | AAAAGCATCACCGACGTGGC+TGG | - | chr7.4:11439880-11439899 | MS.gene061835:intron | 55.0% |
| !! | AGGATGGTTGGTAGCCTCCT+CGG | + | chr7.4:11440436-11440455 | None:intergenic | 55.0% |
| !! | AGGTACTGTGTGCTGACTGG+TGG | - | chr7.4:11442955-11442974 | MS.gene061835:intron | 55.0% |
| AACGACGGGGTCAGAACCAC+CGG | + | chr7.4:11442229-11442248 | None:intergenic | 60.0% | |
| ACCGACGTGGCTGGTACTTG+CGG | - | chr7.4:11439889-11439908 | MS.gene061835:intron | 60.0% | |
| AGGCTACCAACCATCCTGCG+AGG | - | chr7.4:11440439-11440458 | MS.gene061835:intron | 60.0% | |
| ATTTCGGCGTAGTGGCCCCT+AGG | + | chr7.4:11439964-11439983 | None:intergenic | 60.0% | |
| CAAGGTCCGGGTTCAAACCC+CGG | - | chr7.4:11441898-11441917 | MS.gene061835:intron | 60.0% | |
| CGCACTGTGTATGGCCTACG+AGG | + | chr7.4:11441329-11441348 | None:intergenic | 60.0% | |
| GGCACGCTAGCATTGTTGCG+TGG | - | chr7.4:11442790-11442809 | MS.gene061835:intron | 60.0% | |
| GGCTACCAACCATCCTGCGA+GGG | - | chr7.4:11440440-11440459 | MS.gene061835:intron | 60.0% | |
| TCTGCTCTGATAGCTGCCGG+TGG | - | chr7.4:11442210-11442229 | MS.gene061835:intron | 60.0% | |
| !! | GTGGTTCTGACCCCGTCGTT+AGG | - | chr7.4:11442229-11442248 | MS.gene061835:intron | 60.0% |
| GCCGCAAGTACCAGCCACGT+CGG | + | chr7.4:11439893-11439912 | None:intergenic | 65.0% | |
| TGGTGGCCGGGGTTTGAACC+CGG | + | chr7.4:11441907-11441926 | None:intergenic | 65.0% | |
| GGCTGGTACTTGCGGCGCGA+TGG | - | chr7.4:11439897-11439916 | MS.gene061835:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 11437196 | 11443049 | 11437196 | ID=MS.gene061835 |
| chr7.4 | mRNA | 11437196 | 11443049 | 11437196 | ID=MS.gene061835.t1;Parent=MS.gene061835 |
| chr7.4 | exon | 11443008 | 11443049 | 11443008 | ID=MS.gene061835.t1.exon1;Parent=MS.gene061835.t1 |
| chr7.4 | CDS | 11443008 | 11443049 | 11443008 | ID=cds.MS.gene061835.t1;Parent=MS.gene061835.t1 |
| chr7.4 | exon | 11441930 | 11442036 | 11441930 | ID=MS.gene061835.t1.exon2;Parent=MS.gene061835.t1 |
| chr7.4 | CDS | 11441930 | 11442036 | 11441930 | ID=cds.MS.gene061835.t1;Parent=MS.gene061835.t1 |
| chr7.4 | exon | 11441191 | 11441226 | 11441191 | ID=MS.gene061835.t1.exon3;Parent=MS.gene061835.t1 |
| chr7.4 | CDS | 11441191 | 11441226 | 11441191 | ID=cds.MS.gene061835.t1;Parent=MS.gene061835.t1 |
| chr7.4 | exon | 11440974 | 11441059 | 11440974 | ID=MS.gene061835.t1.exon4;Parent=MS.gene061835.t1 |
| chr7.4 | CDS | 11440974 | 11441059 | 11440974 | ID=cds.MS.gene061835.t1;Parent=MS.gene061835.t1 |
| chr7.4 | exon | 11439924 | 11439982 | 11439924 | ID=MS.gene061835.t1.exon5;Parent=MS.gene061835.t1 |
| chr7.4 | CDS | 11439924 | 11439982 | 11439924 | ID=cds.MS.gene061835.t1;Parent=MS.gene061835.t1 |
| chr7.4 | exon | 11439709 | 11439819 | 11439709 | ID=MS.gene061835.t1.exon6;Parent=MS.gene061835.t1 |
| chr7.4 | CDS | 11439709 | 11439819 | 11439709 | ID=cds.MS.gene061835.t1;Parent=MS.gene061835.t1 |
| chr7.4 | exon | 11439491 | 11439613 | 11439491 | ID=MS.gene061835.t1.exon7;Parent=MS.gene061835.t1 |
| chr7.4 | CDS | 11439491 | 11439613 | 11439491 | ID=cds.MS.gene061835.t1;Parent=MS.gene061835.t1 |
| chr7.4 | exon | 11438793 | 11438936 | 11438793 | ID=MS.gene061835.t1.exon8;Parent=MS.gene061835.t1 |
| chr7.4 | CDS | 11438793 | 11438936 | 11438793 | ID=cds.MS.gene061835.t1;Parent=MS.gene061835.t1 |
| chr7.4 | exon | 11437972 | 11438080 | 11437972 | ID=MS.gene061835.t1.exon9;Parent=MS.gene061835.t1 |
| chr7.4 | CDS | 11437972 | 11438080 | 11437972 | ID=cds.MS.gene061835.t1;Parent=MS.gene061835.t1 |
| chr7.4 | exon | 11437738 | 11437874 | 11437738 | ID=MS.gene061835.t1.exon10;Parent=MS.gene061835.t1 |
| chr7.4 | CDS | 11437738 | 11437874 | 11437738 | ID=cds.MS.gene061835.t1;Parent=MS.gene061835.t1 |
| chr7.4 | exon | 11437612 | 11437647 | 11437612 | ID=MS.gene061835.t1.exon11;Parent=MS.gene061835.t1 |
| chr7.4 | CDS | 11437612 | 11437647 | 11437612 | ID=cds.MS.gene061835.t1;Parent=MS.gene061835.t1 |
| chr7.4 | exon | 11437196 | 11437288 | 11437196 | ID=MS.gene061835.t1.exon12;Parent=MS.gene061835.t1 |
| chr7.4 | CDS | 11437196 | 11437288 | 11437196 | ID=cds.MS.gene061835.t1;Parent=MS.gene061835.t1 |
| Gene Sequence |
| Protein sequence |
