AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065189

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065189.t1 MTR_2g079510 98.606 574 8 0 1 574 1 574 0.0 1178
MS.gene065189.t1 MTR_4g081850 87.900 562 50 3 1 552 1 554 0.0 990
MS.gene065189.t1 MTR_1g048030 34.596 396 226 7 197 566 125 513 2.55e-59 208
MS.gene065189.t1 MTR_4g050490 30.422 332 159 9 193 460 150 473 1.03e-33 135
MS.gene065189.t1 MTR_5g010400 72.222 72 20 0 7 78 14 85 3.26e-28 108
MS.gene065189.t1 MTR_7g094890 26.354 277 170 9 206 461 110 373 1.57e-15 79.0
MS.gene065189.t1 MTR_2g079540 69.388 49 13 1 7 53 15 63 6.71e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065189.t1 AT1G52980 73.675 566 138 4 4 561 3 565 0.0 823
MS.gene065189.t1 AT3G07050 32.468 385 232 5 182 539 105 488 8.55e-64 219
MS.gene065189.t1 AT2G27200 29.412 323 171 7 193 460 149 469 8.36e-37 144
MS.gene065189.t1 AT1G08410 28.235 340 180 8 193 473 149 483 6.81e-36 142
MS.gene065189.t1 AT4G02790 28.253 269 161 8 206 455 109 364 9.57e-18 85.9

Find 136 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACATTTGCAATAGCTTTAA+TGG 0.156377 2.4:-18090908 None:intergenic
TTGACGATCGGGTTTAATTC+TGG 0.274173 2.4:-18086658 None:intergenic
GGTCCAAATGCATCCGAAAA+AGG 0.298997 2.4:-18087036 None:intergenic
GTTGGAGTGCTTTGGTTTAC+CGG 0.301059 2.4:-18086490 None:intergenic
CTGGTACATTTCTTTGCTGC+TGG 0.301939 2.4:-18090939 None:intergenic
TCTGGTGGATGGAAGCTCTT+TGG 0.314950 2.4:-18086640 None:intergenic
TAATTACAATATTATTCTTA+AGG 0.328853 2.4:+18086853 MS.gene065189:CDS
TCTGAGGAGCCTAATGTTAA+TGG 0.331391 2.4:+18090841 MS.gene065189:CDS
GGCGGAACGCTTCTCGGTCT+TGG 0.331771 2.4:-18086535 None:intergenic
TGCAAGGTTGCTCCAATTCC+AGG 0.333863 2.4:+18089128 MS.gene065189:CDS
GAAACTCATGATTCACTTGT+TGG 0.343827 2.4:-18091147 None:intergenic
ACTGATGACTTCCCAACATT+TGG 0.350955 2.4:-18088924 None:intergenic
GCAAGTATTAATAAGTCCTT+TGG 0.355327 2.4:+18088643 MS.gene065189:CDS
AATTACAATATTATTCTTAA+GGG 0.359879 2.4:+18086854 MS.gene065189:CDS
ATCATCTGGCAAACTCCTTA+AGG 0.385274 2.4:+18090368 MS.gene065189:CDS
GGTGGCGGCGGAACGCTTCT+CGG 0.388163 2.4:-18086541 None:intergenic
TTCGAAGAGAAGTATGCTTC+TGG 0.392309 2.4:+18087773 MS.gene065189:CDS
AAAGATGCGGCGGACCATAT+AGG 0.394706 2.4:+18089919 MS.gene065189:CDS
GTTTCAAAACCTCGCCTATA+TGG 0.397582 2.4:-18089933 None:intergenic
TTACAAAGTGATAGATTCTT+CGG 0.406549 2.4:+18087892 MS.gene065189:CDS
TCTGTATAATCCCCAGTGTC+TGG 0.420228 2.4:-18091018 None:intergenic
AGCACTCCAACGACGCTAAC+CGG 0.420915 2.4:+18086502 MS.gene065189:CDS
CTTCAGCTTTGCAAATCATC+TGG 0.430614 2.4:+18090354 MS.gene065189:CDS
TGCTTAGGGTTCACTTCTAT+CGG 0.432048 2.4:+18088836 MS.gene065189:intron
ACATCTATGCCATTAACATT+AGG 0.435407 2.4:-18090850 None:intergenic
TGGCAGCAGATGCCTGGTTA+TGG 0.442559 2.4:-18090888 None:intergenic
CTTACGGTTACGAACGGGTC+GGG 0.448708 2.4:-18086589 None:intergenic
TCATCTTTGCTGCGGTCATA+AGG 0.452623 2.4:-18090747 None:intergenic
CAAAGAAATGTACCAGTTCA+AGG 0.453415 2.4:+18090946 MS.gene065189:CDS
TTAGCGTCGTTGGAGTGCTT+TGG 0.454707 2.4:-18086498 None:intergenic
AAGGCATCCTGTCGCGGAGG+AGG 0.459375 2.4:-18090811 None:intergenic
ATACCGAACCATTGACGATC+GGG 0.459478 2.4:-18086669 None:intergenic
AAACTCATGATTCACTTGTT+GGG 0.461628 2.4:-18091146 None:intergenic
TTATATAAATCCCCTTGAAC+TGG 0.467150 2.4:-18090958 None:intergenic
TGGTACATTTCTTTGCTGCT+GGG 0.469996 2.4:-18090938 None:intergenic
TTGTTGGATATCCAAATGTT+GGG 0.472784 2.4:+18088913 MS.gene065189:CDS
GTGGATGGATCCTGCTCAGA+TGG 0.476614 2.4:-18091084 None:intergenic
AGGGTCAAAGCAAACGCATA+TGG 0.478390 2.4:+18087861 MS.gene065189:CDS
TTCTTCGGATGTTGTTGTCC+AGG 0.479432 2.4:+18087907 MS.gene065189:CDS
GAATTAAACCCGATCGTCAA+TGG 0.479885 2.4:+18086661 MS.gene065189:CDS
CTTTAATGGCAGCAGATGCC+TGG 0.480035 2.4:-18090894 None:intergenic
ATTGCTCCGGTTAGCGTCGT+TGG 0.485959 2.4:-18086508 None:intergenic
CTTGAGACGGCGGACGGTGG+CGG 0.486993 2.4:-18086556 None:intergenic
GCAGAAATAAGTTGCTCAGA+TGG 0.487234 2.4:-18091114 None:intergenic
GTGCGATCTAATTCCTGCTT+GGG 0.492181 2.4:+18088564 MS.gene065189:intron
GGGTCAAAGCAAACGCATAT+GGG 0.495588 2.4:+18087862 MS.gene065189:CDS
TTCCAGGGGAAACAAAAGTC+TGG 0.495795 2.4:+18089144 MS.gene065189:CDS
CACTGAGGTCCCATCTGAGC+AGG 0.498975 2.4:+18091074 MS.gene065189:CDS
ATTCCTGCTTGGGCAACAAA+AGG 0.500766 2.4:+18088574 MS.gene065189:CDS
TGACCCTTACGGTTACGAAC+GGG 0.505883 2.4:-18086594 None:intergenic
AGTGCGATCTAATTCCTGCT+TGG 0.506473 2.4:+18088563 MS.gene065189:intron
TTTGCTGCGGTCATAAGGTC+AGG 0.508113 2.4:-18090742 None:intergenic
CTGACCAACTTCCAGACACT+GGG 0.509068 2.4:+18091007 MS.gene065189:CDS
TTGTTGTGGTAGACAACTCC+TGG 0.509529 2.4:-18089209 None:intergenic
TGCTCAAGACATGACCCTTA+CGG 0.510670 2.4:-18086605 None:intergenic
GCAACTTATTTCTGCTGAGC+CGG 0.516301 2.4:+18091122 MS.gene065189:CDS
GAGACGGCGGACGGTGGCGG+CGG 0.518308 2.4:-18086553 None:intergenic
GAGCGAAACGTTAACCTCTC+CGG 0.518412 2.4:+18086471 MS.gene065189:CDS
TTTGTTGGATATCCAAATGT+TGG 0.518902 2.4:+18088912 MS.gene065189:CDS
CATGATTCACTTGTTGGGAC+CGG 0.522319 2.4:-18091141 None:intergenic
CTGCTTGGGCAACAAAAGGA+TGG 0.530434 2.4:+18088578 MS.gene065189:CDS
TCGGGTTTAATTCTGGTGGA+TGG 0.533855 2.4:-18086651 None:intergenic
AAACCCGATCGTCAATGGTT+CGG 0.535436 2.4:+18086666 MS.gene065189:CDS
GAGCTTATAAAATAAAAGAA+TGG 0.536265 2.4:+18089980 MS.gene065189:CDS
CGGTCTTGGAGTCATTGCTC+CGG 0.539368 2.4:-18086521 None:intergenic
AGGACTTATTAATACTTGCA+TGG 0.542141 2.4:-18088639 None:intergenic
GATAAGCAAGCAATATCTGT+TGG 0.542451 2.4:+18088888 MS.gene065189:CDS
GCTGACCAACTTCCAGACAC+TGG 0.544164 2.4:+18091006 MS.gene065189:CDS
GCTTTGACCCTTCTCAAACA+TGG 0.549519 2.4:-18087849 None:intergenic
TAATATGTCATAGGTTTGCA+AGG 0.549737 2.4:+18089112 MS.gene065189:intron
TGATACTTCACGATTGGCAG+AGG 0.551420 2.4:+18090767 MS.gene065189:CDS
CAAAGATGATACTTCACGAT+TGG 0.552750 2.4:+18090761 MS.gene065189:CDS
GCAAGGTTGCTCCAATTCCA+GGG 0.553714 2.4:+18089129 MS.gene065189:CDS
TGAAACAGATGTTGTGCTGA+AGG 0.557161 2.4:+18089238 MS.gene065189:CDS
AATCCCCAGTGTCTGGAAGT+TGG 0.559535 2.4:-18091011 None:intergenic
AGGCATCCTGTCGCGGAGGA+GGG 0.561993 2.4:-18090810 None:intergenic
ATGATTTGCAAAGCTGAAGT+AGG 0.563324 2.4:-18090350 None:intergenic
TGATACAGGTTATAGATGCA+AGG 0.563934 2.4:+18088350 MS.gene065189:intron
AAGAAAGCTGATGGTTCTCA+AGG 0.565803 2.4:+18087114 MS.gene065189:CDS
TAATCATTGAGAAGCGACAT+AGG 0.566710 2.4:-18086887 None:intergenic
GTGAATATTGTAGCAATCGA+GGG 0.567017 2.4:+18086993 MS.gene065189:intron
GGATGCCTTGTCCGAGTCTG+AGG 0.567765 2.4:+18090825 MS.gene065189:CDS
AAAGAAATGTACCAGTTCAA+GGG 0.570482 2.4:+18090947 MS.gene065189:CDS
AACATTAGGCTCCTCAGACT+CGG 0.574413 2.4:-18090836 None:intergenic
TAATCAGAAGCTAAAAGACT+TGG 0.574791 2.4:-18087078 None:intergenic
TATTAATAAGTCCTTTGGAA+AGG 0.575592 2.4:+18088648 MS.gene065189:CDS
TGATAACATCTTGTGCCTTG+TGG 0.576348 2.4:-18088376 None:intergenic
CTTGCATGGAATGCTAGCGT+TGG 0.576468 2.4:-18088625 None:intergenic
TCAGATGGGACCTCAGTGGA+TGG 0.578068 2.4:-18091069 None:intergenic
TGAAGATAGTGACGCATCTG+AGG 0.578703 2.4:+18091041 MS.gene065189:CDS
ACGATCGGGTTTAATTCTGG+TGG 0.582606 2.4:-18086655 None:intergenic
ATTACAATATTATTCTTAAG+GGG 0.583366 2.4:+18086855 MS.gene065189:CDS
GCAGAAGCTGATGAAGCAGA+TGG 0.586404 2.4:+18087803 MS.gene065189:CDS
CAAGGTTGCTCCAATTCCAG+GGG 0.586597 2.4:+18089130 MS.gene065189:CDS
CCGACCCGTTCGTAACCGTA+AGG 0.586850 2.4:+18086590 MS.gene065189:CDS
GCTTCTCAATGATTATCAGA+AGG 0.590205 2.4:+18086895 MS.gene065189:CDS
GTACATCTTGAGACGGCGGA+CGG 0.590589 2.4:-18086562 None:intergenic
GCGACATACCATGTTTGAGA+AGG 0.592879 2.4:+18087841 MS.gene065189:CDS
AGTGCTTTGGTTTACCGGAG+AGG 0.596572 2.4:-18086485 None:intergenic
GATACAGGTTATAGATGCAA+GGG 0.598294 2.4:+18088351 MS.gene065189:intron
TGGATGGATCCTGCTCAGAT+GGG 0.599401 2.4:-18091083 None:intergenic
CGACATACCATGTTTGAGAA+GGG 0.600865 2.4:+18087842 MS.gene065189:CDS
GCTTTAGCTAAGAAAGCTGA+TGG 0.603579 2.4:+18087105 MS.gene065189:CDS
TGTGAATATTGTAGCAATCG+AGG 0.604952 2.4:+18086992 MS.gene065189:intron
GATACTTCACGATTGGCAGA+GGG 0.606800 2.4:+18090768 MS.gene065189:CDS
CATCTTGAGACGGCGGACGG+TGG 0.606870 2.4:-18086559 None:intergenic
TCGGACAAGGCATCCTGTCG+CGG 0.610044 2.4:-18090817 None:intergenic
CAAGGCAGTTGACCATAACC+AGG 0.614954 2.4:+18090876 MS.gene065189:CDS
AGAGAAGTATGCTTCTGGTA+CGG 0.614990 2.4:+18087778 MS.gene065189:CDS
AAGAAATGTACCAGTTCAAG+GGG 0.617586 2.4:+18090948 MS.gene065189:CDS
AGGCTCCTCAGACTCGGACA+AGG 0.620195 2.4:-18090830 None:intergenic
CATACCGAACCATTGACGAT+CGG 0.620640 2.4:-18086670 None:intergenic
AGATGTTGTGCTGAAGGGTG+TGG 0.624230 2.4:+18089244 MS.gene065189:CDS
TCAAAAGTATACCTTTCCAA+AGG 0.626771 2.4:-18088659 None:intergenic
GAAACAGATGTTGTGCTGAA+GGG 0.627938 2.4:+18089239 MS.gene065189:CDS
TTGCTCAGATGGAACATCAG+TGG 0.632602 2.4:-18091103 None:intergenic
CTGTTTCAGAGTCATTGTTG+TGG 0.635053 2.4:-18089223 None:intergenic
AGATAGTGACGCATCTGAGG+AGG 0.635212 2.4:+18091044 MS.gene065189:CDS
CCTTACGGTTACGAACGGGT+CGG 0.635620 2.4:-18086590 None:intergenic
ATGACCCTTACGGTTACGAA+CGG 0.636046 2.4:-18086595 None:intergenic
CTGCTCAGATGGGACCTCAG+TGG 0.639451 2.4:-18091073 None:intergenic
CGACCCGTTCGTAACCGTAA+GGG 0.644461 2.4:+18086591 MS.gene065189:CDS
AGTATATTACCCTTACAAAG+AGG 0.647626 2.4:+18089168 MS.gene065189:CDS
AAATTGCAAGCACAAACACA+TGG 0.648597 2.4:+18088420 MS.gene065189:CDS
GACAAGGCATCCTGTCGCGG+AGG 0.650985 2.4:-18090814 None:intergenic
GGTCAAAGCAAACGCATATG+GGG 0.655411 2.4:+18087863 MS.gene065189:CDS
TCAGATGGAACATCAGTGGA+TGG 0.659620 2.4:-18091099 None:intergenic
GTGAAGTATCATCTTTGCTG+CGG 0.666582 2.4:-18090755 None:intergenic
AACAAACTTGAAAGATGCGG+CGG 0.666795 2.4:+18089909 MS.gene065189:CDS
TGCGGCGGACCATATAGGCG+AGG 0.667170 2.4:+18089924 MS.gene065189:CDS
TAATGGCATAGATGTTGACA+AGG 0.669203 2.4:+18090858 MS.gene065189:CDS
TGTAACAAACTTGAAAGATG+CGG 0.682782 2.4:+18089906 MS.gene065189:CDS
ATACTTCACGATTGGCAGAG+GGG 0.703263 2.4:+18090769 MS.gene065189:CDS
ATAGATGCAAGGGATCCACA+AGG 0.751368 2.4:+18088361 MS.gene065189:CDS
TGACCAACTTCCAGACACTG+GGG 0.753638 2.4:+18091008 MS.gene065189:CDS
TGAGGAGGATCCATCCACTG+AGG 0.772372 2.4:+18091059 MS.gene065189:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAATAGTTTAAATGA+GGG + chr2.4:18089749-18089768 MS.gene065189:intron 10.0%
!! AATGTAAAGAAATAAATTAA+GGG - chr2.4:18088512-18088531 None:intergenic 10.0%
!! AATTACAATATTATTCTTAA+GGG + chr2.4:18086854-18086873 MS.gene065189:CDS 10.0%
!! TAAATAAAATAGTTTAAATG+AGG + chr2.4:18089748-18089767 MS.gene065189:intron 10.0%
!! TAATGTAAAGAAATAAATTA+AGG - chr2.4:18088513-18088532 None:intergenic 10.0%
!! TAATTACAATATTATTCTTA+AGG + chr2.4:18086853-18086872 MS.gene065189:CDS 10.0%
!! TTACTTTGATATTAAAAAAA+AGG + chr2.4:18090417-18090436 MS.gene065189:intron 10.0%
!! AAAAACAAGAATATAAAAGT+TGG - chr2.4:18090061-18090080 None:intergenic 15.0%
!! ATAATGAATTTATATTCTGT+GGG - chr2.4:18089618-18089637 None:intergenic 15.0%
!! ATCACAATAATATTAAACAA+TGG - chr2.4:18088020-18088039 None:intergenic 15.0%
!! ATTACAATATTATTCTTAAG+GGG + chr2.4:18086855-18086874 MS.gene065189:CDS 15.0%
!! TATAATGAATTTATATTCTG+TGG - chr2.4:18089619-18089638 None:intergenic 15.0%
!! TTTATTTGCTTAATAAAGAA+TGG + chr2.4:18087618-18087637 MS.gene065189:intron 15.0%
!!! TTAATACTTTACTTATTTTC+AGG + chr2.4:18089879-18089898 MS.gene065189:intron 15.0%
!! AAAGTTCAAGAAAAACAAAT+TGG - chr2.4:18090651-18090670 None:intergenic 20.0%
!! AAGTTTGTCATAGTAAAATA+AGG + chr2.4:18088142-18088161 MS.gene065189:intron 20.0%
!! AATTCAAAAAGAATACCTTA+AGG - chr2.4:18090386-18090405 None:intergenic 20.0%
!! AGTTTGTCATAGTAAAATAA+GGG + chr2.4:18088143-18088162 MS.gene065189:intron 20.0%
!! ATGTTCTTCCTTAAATAATT+TGG - chr2.4:18087529-18087548 None:intergenic 20.0%
!! GAGCTTATAAAATAAAAGAA+TGG + chr2.4:18089980-18089999 MS.gene065189:CDS 20.0%
!! TAATAGTTTCTTAAAACCAA+AGG + chr2.4:18087356-18087375 MS.gene065189:intron 20.0%
!! TATATTTCTTATGTAAGACA+AGG + chr2.4:18090671-18090690 MS.gene065189:intron 20.0%
!! TGCTAAAATACTTATAATTC+TGG - chr2.4:18089070-18089089 None:intergenic 20.0%
!! TTCAAAAACCAGAAAAATAT+AGG - chr2.4:18089441-18089460 None:intergenic 20.0%
!!! AGAATTATAAGTATTTTAGC+AGG + chr2.4:18089069-18089088 MS.gene065189:intron 20.0%
!!! ATAATATAAAGAGCATACAT+GGG - chr2.4:18089805-18089824 None:intergenic 20.0%
!!! ATATTATTCATGTGTTGTTT+TGG + chr2.4:18089469-18089488 MS.gene065189:intron 20.0%
!!! CTCTAAAACCAAATTATTTA+AGG + chr2.4:18087518-18087537 MS.gene065189:intron 20.0%
!!! GTCATATACTCATATTTTAA+TGG + chr2.4:18089673-18089692 MS.gene065189:intron 20.0%
!!! TATAATATAAAGAGCATACA+TGG - chr2.4:18089806-18089825 None:intergenic 20.0%
!!! TATGTGAATTTATTGGTTTA+TGG + chr2.4:18086968-18086987 MS.gene065189:intron 20.0%
!!! TATTATTCATGTGTTGTTTT+GGG + chr2.4:18089470-18089489 MS.gene065189:intron 20.0%
! AAAACACAAAAACAGTTATC+AGG - chr2.4:18087725-18087744 None:intergenic 25.0%
! AAAATATAGGATGTATCACA+AGG - chr2.4:18089428-18089447 None:intergenic 25.0%
! AATATTGTTCCTATTGTAGT+GGG + chr2.4:18089647-18089666 MS.gene065189:intron 25.0%
! AGATTACTAAACAATCATGT+TGG + chr2.4:18089387-18089406 MS.gene065189:intron 25.0%
! AGGTTAAAAACAACATCATT+TGG - chr2.4:18087705-18087724 None:intergenic 25.0%
! ATTTAAGGAAGAACATGAAA+GGG + chr2.4:18087533-18087552 MS.gene065189:intron 25.0%
! CAAACCTATGACATATTAAT+CGG - chr2.4:18089110-18089129 None:intergenic 25.0%
! GGTGAATTATGTGAATTTAT+TGG + chr2.4:18086961-18086980 MS.gene065189:intron 25.0%
! TAATATTGTTCCTATTGTAG+TGG + chr2.4:18089646-18089665 MS.gene065189:intron 25.0%
! TATTTAAGGAAGAACATGAA+AGG + chr2.4:18087532-18087551 MS.gene065189:intron 25.0%
! TTACAAAGTGATAGATTCTT+CGG + chr2.4:18087892-18087911 MS.gene065189:CDS 25.0%
! TTTCTTAAAACCAAAGGAAA+GGG + chr2.4:18087362-18087381 MS.gene065189:intron 25.0%
!! AAATTCAGCTTGTGAATTTT+AGG + chr2.4:18086733-18086752 MS.gene065189:intron 25.0%
!! AATTCAGCTTGTGAATTTTA+GGG + chr2.4:18086734-18086753 MS.gene065189:intron 25.0%
!! GAGGAACAATTTAAAACAAA+AGG - chr2.4:18088485-18088504 None:intergenic 25.0%
!! TATTAATAAGTCCTTTGGAA+AGG + chr2.4:18088648-18088667 MS.gene065189:CDS 25.0%
!! TGATACATCCTATATTTTTC+TGG + chr2.4:18089430-18089449 MS.gene065189:intron 25.0%
!!! AACATTTGCAATAGCTTTAA+TGG - chr2.4:18090911-18090930 None:intergenic 25.0%
!!! TAAACAAAGTTTTAGCAACA+GGG - chr2.4:18087943-18087962 None:intergenic 25.0%
!!! TATTTAAGTTGATGAATCCA+TGG + chr2.4:18088243-18088262 MS.gene065189:intron 25.0%
!!! TTAAACAAAGTTTTAGCAAC+AGG - chr2.4:18087944-18087963 None:intergenic 25.0%
!!! TTCATCTTTAGTTGATTTGT+TGG + chr2.4:18088683-18088702 MS.gene065189:intron 25.0%
!!! TTCCTGCTTAAGTTTTAATT+AGG + chr2.4:18089004-18089023 MS.gene065189:intron 25.0%
AAAGAAATGTACCAGTTCAA+GGG + chr2.4:18090947-18090966 MS.gene065189:CDS 30.0%
AAGGGAAAAAACTAGAAGTT+GGG + chr2.4:18088161-18088180 MS.gene065189:intron 30.0%
ACATCTATGCCATTAACATT+AGG - chr2.4:18090853-18090872 None:intergenic 30.0%
AGGACTTATTAATACTTGCA+TGG - chr2.4:18088642-18088661 None:intergenic 30.0%
AGTATATTACCCTTACAAAG+AGG + chr2.4:18089168-18089187 MS.gene065189:CDS 30.0%
ATAAAAAAGACAAGTGAAGC+TGG + chr2.4:18088735-18088754 MS.gene065189:intron 30.0%
ATAAGATAGCAAATAGCTGA+AGG - chr2.4:18088800-18088819 None:intergenic 30.0%
ATATTGTTCCTATTGTAGTG+GGG + chr2.4:18089648-18089667 MS.gene065189:intron 30.0%
ATCTAGTCTAAGTCAAATTG+AGG - chr2.4:18090486-18090505 None:intergenic 30.0%
ATGCTATTACTTCAAAGGAA+AGG + chr2.4:18087403-18087422 MS.gene065189:intron 30.0%
ATTAACGCATTACTGGAAAT+TGG - chr2.4:18088709-18088728 None:intergenic 30.0%
ATTGCTCATTATCATGCTTA+GGG + chr2.4:18088822-18088841 MS.gene065189:intron 30.0%
CAAAAAGATCCTCTTTGTAA+GGG - chr2.4:18089180-18089199 None:intergenic 30.0%
CTCCTAATTAAAACTTAAGC+AGG - chr2.4:18089009-18089028 None:intergenic 30.0%
CTTCAATGCTATTACTTCAA+AGG + chr2.4:18087398-18087417 MS.gene065189:intron 30.0%
GAACTGCTTAATTGTTGAAA+TGG + chr2.4:18086935-18086954 MS.gene065189:intron 30.0%
GCAAGTATTAATAAGTCCTT+TGG + chr2.4:18088643-18088662 MS.gene065189:CDS 30.0%
GCTTAATTGTTGAAATGGTT+TGG + chr2.4:18086940-18086959 MS.gene065189:intron 30.0%
GTAAGGAATTATGAACAGTA+AGG + chr2.4:18090152-18090171 MS.gene065189:intron 30.0%
GTTTCTTAAAACCAAAGGAA+AGG + chr2.4:18087361-18087380 MS.gene065189:intron 30.0%
TAAGGGAAAAAACTAGAAGT+TGG + chr2.4:18088160-18088179 MS.gene065189:intron 30.0%
TAATATGTCATAGGTTTGCA+AGG + chr2.4:18089112-18089131 MS.gene065189:intron 30.0%
TAATCAGAAGCTAAAAGACT+TGG - chr2.4:18087081-18087100 None:intergenic 30.0%
TATTGCTCATTATCATGCTT+AGG + chr2.4:18088821-18088840 MS.gene065189:intron 30.0%
TCAAAAAGATCCTCTTTGTA+AGG - chr2.4:18089181-18089200 None:intergenic 30.0%
TGCTATTACTTCAAAGGAAA+GGG + chr2.4:18087404-18087423 MS.gene065189:intron 30.0%
TGTAACAAACTTGAAAGATG+CGG + chr2.4:18089906-18089925 MS.gene065189:CDS 30.0%
TTATATAAATCCCCTTGAAC+TGG - chr2.4:18090961-18090980 None:intergenic 30.0%
TTCACCAAATAAAAGACTCA+TGG - chr2.4:18087460-18087479 None:intergenic 30.0%
TTGACATGCTGTAACATAAA+GGG - chr2.4:18090606-18090625 None:intergenic 30.0%
TTGTTGGATATCCAAATGTT+GGG + chr2.4:18088913-18088932 MS.gene065189:CDS 30.0%
TTTAAGGAAGAACATGAAAG+GGG + chr2.4:18087534-18087553 MS.gene065189:intron 30.0%
TTTGACATGCTGTAACATAA+AGG - chr2.4:18090607-18090626 None:intergenic 30.0%
TTTGTTGGATATCCAAATGT+TGG + chr2.4:18088912-18088931 MS.gene065189:CDS 30.0%
! ACTTTACATGCCATTTATAC+TGG + chr2.4:18090203-18090222 MS.gene065189:intron 30.0%
! GTAGCTTGTATACAAAAACT+AGG + chr2.4:18090278-18090297 MS.gene065189:intron 30.0%
! TCAAAAGTATACCTTTCCAA+AGG - chr2.4:18088662-18088681 None:intergenic 30.0%
! TGAAGGTATACAAGTGTTAA+TGG - chr2.4:18088783-18088802 None:intergenic 30.0%
! TTCATTGATTAACGCATTAC+TGG - chr2.4:18088716-18088735 None:intergenic 30.0%
!! ATCTTTTTGATTGATTGTCC+AGG + chr2.4:18089191-18089210 MS.gene065189:CDS 30.0%
!! CTCTTGTTTCCTTTTTACTT+TGG + chr2.4:18089275-18089294 MS.gene065189:intron 30.0%
!! GAAATAAATTAAGGGTATCG+AGG - chr2.4:18088504-18088523 None:intergenic 30.0%
!! TGAGTTTTTCAGAGAAGAAA+TGG + chr2.4:18086814-18086833 MS.gene065189:CDS 30.0%
!!! GTTTGGTTTTGTGATTTGTA+GGG + chr2.4:18086762-18086781 MS.gene065189:intron 30.0%
!!! TCTTTTAGCTTCTGATTATG+AGG + chr2.4:18087083-18087102 MS.gene065189:CDS 30.0%
!!! TGAATTTTAGGGTTTTGGTT+TGG + chr2.4:18086745-18086764 MS.gene065189:intron 30.0%
AAATTGCAAGCACAAACACA+TGG + chr2.4:18088420-18088439 MS.gene065189:CDS 35.0%
AACCCTGATGACAAGATATA+TGG - chr2.4:18090316-18090335 None:intergenic 35.0%
AAGAAATGTACCAGTTCAAG+GGG + chr2.4:18090948-18090967 MS.gene065189:CDS 35.0%
AATCTAAGAATAGCTCTTCC+TGG - chr2.4:18089504-18089523 None:intergenic 35.0%
AGGAATTATGAACAGTAAGG+TGG + chr2.4:18090155-18090174 MS.gene065189:intron 35.0%
ATACACAGATAACCAAATCC+AGG - chr2.4:18090229-18090248 None:intergenic 35.0%
ATCAACAAGTATTCCCACTA+AGG - chr2.4:18087663-18087682 None:intergenic 35.0%
ATCACGCAACCAAAGTAAAA+AGG - chr2.4:18089287-18089306 None:intergenic 35.0%
ATCTAAGAATAGCTCTTCCT+GGG - chr2.4:18089503-18089522 None:intergenic 35.0%
ATGCCATATATCTTGTCATC+AGG + chr2.4:18090310-18090329 MS.gene065189:intron 35.0%
CAAAGAAATGTACCAGTTCA+AGG + chr2.4:18090946-18090965 MS.gene065189:CDS 35.0%
CAAAGATGATACTTCACGAT+TGG + chr2.4:18090761-18090780 MS.gene065189:CDS 35.0%
CAAGTGTTAATGGAGAGAAA+AGG - chr2.4:18088773-18088792 None:intergenic 35.0%
CACAATCCATCAACATAGAA+AGG - chr2.4:18087974-18087993 None:intergenic 35.0%
CCAAATAAAAGACTCATGGT+TGG - chr2.4:18087456-18087475 None:intergenic 35.0%
GAAACACATAAATGCTTGTC+AGG - chr2.4:18087998-18088017 None:intergenic 35.0%
GATAAGCAAGCAATATCTGT+TGG + chr2.4:18088888-18088907 MS.gene065189:CDS 35.0%
GATACAGGTTATAGATGCAA+GGG + chr2.4:18088351-18088370 MS.gene065189:intron 35.0%
GCTTCTCAATGATTATCAGA+AGG + chr2.4:18086895-18086914 MS.gene065189:CDS 35.0%
GTGAATATTGTAGCAATCGA+GGG + chr2.4:18086993-18087012 MS.gene065189:intron 35.0%
GTTCGGTATGTTCAATTTGA+GGG + chr2.4:18086683-18086702 MS.gene065189:intron 35.0%
TAATATACGACCAGTGTAAG+TGG - chr2.4:18089582-18089601 None:intergenic 35.0%
TAATCATTGAGAAGCGACAT+AGG - chr2.4:18086890-18086909 None:intergenic 35.0%
TAATGGCATAGATGTTGACA+AGG + chr2.4:18090858-18090877 MS.gene065189:CDS 35.0%
TATTGTATCTGTCCTGATAC+AGG + chr2.4:18088336-18088355 MS.gene065189:intron 35.0%
TCTGCAAACGAAAGTAATGT+AGG - chr2.4:18087749-18087768 None:intergenic 35.0%
TCTTCACCTTTCTATGTTGA+TGG + chr2.4:18087965-18087984 MS.gene065189:intron 35.0%
TGACTAGCATATTACCTATG+TGG + chr2.4:18089540-18089559 MS.gene065189:intron 35.0%
TGATACAGGTTATAGATGCA+AGG + chr2.4:18088350-18088369 MS.gene065189:intron 35.0%
TGCCATATATCTTGTCATCA+GGG + chr2.4:18090311-18090330 MS.gene065189:intron 35.0%
TGCTCTGTTAATGTGAAGTA+CGG + chr2.4:18088098-18088117 MS.gene065189:intron 35.0%
TGTAGTTCAAGCATCTTGTA+AGG + chr2.4:18090135-18090154 MS.gene065189:intron 35.0%
TGTGAATATTGTAGCAATCG+AGG + chr2.4:18086992-18087011 MS.gene065189:intron 35.0%
TTGCATCTATAACCTGTATC+AGG - chr2.4:18088351-18088370 None:intergenic 35.0%
! ATAAAGAGCATACATGGGTT+TGG - chr2.4:18089800-18089819 None:intergenic 35.0%
! ATGATTTGCAAAGCTGAAGT+AGG - chr2.4:18090353-18090372 None:intergenic 35.0%
! CAGTTTTCTGTTTCCTTAGT+GGG + chr2.4:18087647-18087666 MS.gene065189:intron 35.0%
! CATGGTGCTTTTATTGAACA+AGG + chr2.4:18088438-18088457 MS.gene065189:CDS 35.0%
! CCAACCATGAGTCTTTTATT+TGG + chr2.4:18087453-18087472 MS.gene065189:intron 35.0%
! GGTTTATTTAGCTCATCCAT+AGG + chr2.4:18087555-18087574 MS.gene065189:intron 35.0%
! TAAAGAGCATACATGGGTTT+GGG - chr2.4:18089799-18089818 None:intergenic 35.0%
! TCTTGATAGAGAGCCTTTTT+CGG + chr2.4:18087023-18087042 MS.gene065189:CDS 35.0%
! TTGATGCGACTTTTACTCAA+TGG + chr2.4:18090701-18090720 MS.gene065189:intron 35.0%
! TTTACTCAATGGCTTTTCCA+GGG + chr2.4:18090712-18090731 MS.gene065189:intron 35.0%
! TTTTACTCAATGGCTTTTCC+AGG + chr2.4:18090711-18090730 MS.gene065189:intron 35.0%
!! TAAGTTGATGAATCCATGGT+TGG + chr2.4:18088247-18088266 MS.gene065189:intron 35.0%
!!! GCAATATCTGTTGGTTTTGT+TGG + chr2.4:18088897-18088916 MS.gene065189:CDS 35.0%
!!! GCTTGTGAATTTTAGGGTTT+TGG + chr2.4:18086740-18086759 MS.gene065189:intron 35.0%
!!! GGTTTGGTTTTGTGATTTGT+AGG + chr2.4:18086761-18086780 MS.gene065189:intron 35.0%
AACAAACTTGAAAGATGCGG+CGG + chr2.4:18089909-18089928 MS.gene065189:CDS 40.0%
AAGAAAGCTGATGGTTCTCA+AGG + chr2.4:18087114-18087133 MS.gene065189:CDS 40.0%
ACTGATGACTTCCCAACATT+TGG - chr2.4:18088927-18088946 None:intergenic 40.0%
ATCATCTGGCAAACTCCTTA+AGG + chr2.4:18090368-18090387 MS.gene065189:CDS 40.0%
ATCGCACTGCAAAAAGAATG+AGG - chr2.4:18088551-18088570 None:intergenic 40.0%
ATGTTTGCACATCCAGTCTT+GGG - chr2.4:18089338-18089357 None:intergenic 40.0%
CAAACAAATTCGACCAACCA+TGG - chr2.4:18088263-18088282 None:intergenic 40.0%
CAAATCCAGGCCAGTATAAA+TGG - chr2.4:18090216-18090235 None:intergenic 40.0%
CAGGAAATAAGAAGCAGTGA+AGG - chr2.4:18088990-18089009 None:intergenic 40.0%
CGACATACCATGTTTGAGAA+GGG + chr2.4:18087842-18087861 MS.gene065189:CDS 40.0%
CTACTATTCAACACGAAGTG+AGG - chr2.4:18090021-18090040 None:intergenic 40.0%
CTGTTTCAGAGTCATTGTTG+TGG - chr2.4:18089226-18089245 None:intergenic 40.0%
CTTCAGCTTTGCAAATCATC+TGG + chr2.4:18090354-18090373 MS.gene065189:CDS 40.0%
GAAACAGATGTTGTGCTGAA+GGG + chr2.4:18089239-18089258 MS.gene065189:CDS 40.0%
GAATTAAACCCGATCGTCAA+TGG + chr2.4:18086661-18086680 MS.gene065189:CDS 40.0%
GCAGAAATAAGTTGCTCAGA+TGG - chr2.4:18091117-18091136 None:intergenic 40.0%
GCTTTAGCTAAGAAAGCTGA+TGG + chr2.4:18087105-18087124 MS.gene065189:CDS 40.0%
GTGGCCGATTAATATGTCAT+AGG + chr2.4:18089103-18089122 MS.gene065189:intron 40.0%
GTTTCAAAACCTCGCCTATA+TGG - chr2.4:18089936-18089955 None:intergenic 40.0%
TAACCAAGTTACAACGCCTA+TGG - chr2.4:18087574-18087593 None:intergenic 40.0%
TATGTTTGCACATCCAGTCT+TGG - chr2.4:18089339-18089358 None:intergenic 40.0%
TCTGAGGAGCCTAATGTTAA+TGG + chr2.4:18090841-18090860 MS.gene065189:CDS 40.0%
TGAAACAGATGTTGTGCTGA+AGG + chr2.4:18089238-18089257 MS.gene065189:CDS 40.0%
TGATAACATCTTGTGCCTTG+TGG - chr2.4:18088379-18088398 None:intergenic 40.0%
TGCTTAGGGTTCACTTCTAT+CGG + chr2.4:18088836-18088855 MS.gene065189:intron 40.0%
TGGTACATTTCTTTGCTGCT+GGG - chr2.4:18090941-18090960 None:intergenic 40.0%
TTGACGATCGGGTTTAATTC+TGG - chr2.4:18086661-18086680 None:intergenic 40.0%
! AGAGAAGTATGCTTCTGGTA+CGG + chr2.4:18087778-18087797 MS.gene065189:CDS 40.0%
! CATTTATACTGGCCTGGATT+TGG + chr2.4:18090214-18090233 MS.gene065189:intron 40.0%
! CGTTGTTGTTGTTGTTGTTG+TGG + chr2.4:18089855-18089874 MS.gene065189:intron 40.0%
! GCAGTTTTCTGTTTCCTTAG+TGG + chr2.4:18087646-18087665 MS.gene065189:intron 40.0%
! GGTTCGGTATGTTCAATTTG+AGG + chr2.4:18086682-18086701 MS.gene065189:intron 40.0%
! GTGAAGTATCATCTTTGCTG+CGG - chr2.4:18090758-18090777 None:intergenic 40.0%
! TTCGAAGAGAAGTATGCTTC+TGG + chr2.4:18087773-18087792 MS.gene065189:CDS 40.0%
! TTCTTTAGCTCCATCACAGA+GGG - chr2.4:18090512-18090531 None:intergenic 40.0%
! TTTCTTTAGCTCCATCACAG+AGG - chr2.4:18090513-18090532 None:intergenic 40.0%
! TTTTGTACATCTTGAGACGG+CGG - chr2.4:18086569-18086588 None:intergenic 40.0%
!! ACTTTTGTTTCCCCTGGAAT+TGG - chr2.4:18089143-18089162 None:intergenic 40.0%
!! GGGTTTTGTACATCTTGAGA+CGG - chr2.4:18086572-18086591 None:intergenic 40.0%
!! GGTCGCTTTCTTTTAGTCTT+AGG - chr2.4:18087060-18087079 None:intergenic 40.0%
!!! GGTTTTGAAACGTGTGAAGA+AGG + chr2.4:18089945-18089964 MS.gene065189:CDS 40.0%
AAACCCGATCGTCAATGGTT+CGG + chr2.4:18086666-18086685 MS.gene065189:CDS 45.0%
AACATTAGGCTCCTCAGACT+CGG - chr2.4:18090839-18090858 None:intergenic 45.0%
ACGATCGGGTTTAATTCTGG+TGG - chr2.4:18086658-18086677 None:intergenic 45.0%
AGGGTCAAAGCAAACGCATA+TGG + chr2.4:18087861-18087880 MS.gene065189:CDS 45.0%
AGTGCGATCTAATTCCTGCT+TGG + chr2.4:18088563-18088582 MS.gene065189:intron 45.0%
ATACCGAACCATTGACGATC+GGG - chr2.4:18086672-18086691 None:intergenic 45.0%
ATACTTCACGATTGGCAGAG+GGG + chr2.4:18090769-18090788 MS.gene065189:CDS 45.0%
ATAGATGCAAGGGATCCACA+AGG + chr2.4:18088361-18088380 MS.gene065189:CDS 45.0%
ATGACCCTTACGGTTACGAA+CGG - chr2.4:18086598-18086617 None:intergenic 45.0%
ATTCCTGCTTGGGCAACAAA+AGG + chr2.4:18088574-18088593 MS.gene065189:CDS 45.0%
CATACCGAACCATTGACGAT+CGG - chr2.4:18086673-18086692 None:intergenic 45.0%
CTGGTACATTTCTTTGCTGC+TGG - chr2.4:18090942-18090961 None:intergenic 45.0%
GATACTTCACGATTGGCAGA+GGG + chr2.4:18090768-18090787 MS.gene065189:CDS 45.0%
GCGACATACCATGTTTGAGA+AGG + chr2.4:18087841-18087860 MS.gene065189:CDS 45.0%
GCTTTGACCCTTCTCAAACA+TGG - chr2.4:18087852-18087871 None:intergenic 45.0%
GGATGTATCACAAGGCTGAT+TGG - chr2.4:18089420-18089439 None:intergenic 45.0%
GGGTAAAATGACAGCCACAT+AGG - chr2.4:18089557-18089576 None:intergenic 45.0%
GGGTCAAAGCAAACGCATAT+GGG + chr2.4:18087862-18087881 MS.gene065189:CDS 45.0%
GGTCAAAGCAAACGCATATG+GGG + chr2.4:18087863-18087882 MS.gene065189:CDS 45.0%
GGTCCAAATGCATCCGAAAA+AGG - chr2.4:18087039-18087058 None:intergenic 45.0%
GTGCGATCTAATTCCTGCTT+GGG + chr2.4:18088564-18088583 MS.gene065189:intron 45.0%
TATGACCACCCCACTACAAT+AGG - chr2.4:18089659-18089678 None:intergenic 45.0%
TCAGATGGAACATCAGTGGA+TGG - chr2.4:18091102-18091121 None:intergenic 45.0%
TCATCTTTGCTGCGGTCATA+AGG - chr2.4:18090750-18090769 None:intergenic 45.0%
TCGGGTTTAATTCTGGTGGA+TGG - chr2.4:18086654-18086673 None:intergenic 45.0%
TCTGTATAATCCCCAGTGTC+TGG - chr2.4:18091021-18091040 None:intergenic 45.0%
TGAAGATAGTGACGCATCTG+AGG + chr2.4:18091041-18091060 MS.gene065189:CDS 45.0%
TGATACTTCACGATTGGCAG+AGG + chr2.4:18090767-18090786 MS.gene065189:CDS 45.0%
TGCTCAAGACATGACCCTTA+CGG - chr2.4:18086608-18086627 None:intergenic 45.0%
TTCCAGGGGAAACAAAAGTC+TGG + chr2.4:18089144-18089163 MS.gene065189:CDS 45.0%
TTCTTCGGATGTTGTTGTCC+AGG + chr2.4:18087907-18087926 MS.gene065189:CDS 45.0%
TTGCTCAGATGGAACATCAG+TGG - chr2.4:18091106-18091125 None:intergenic 45.0%
TTGTTGTGGTAGACAACTCC+TGG - chr2.4:18089212-18089231 None:intergenic 45.0%
! ACATGCCATTTATACTGGCC+TGG + chr2.4:18090208-18090227 MS.gene065189:intron 45.0%
! CATCCATAGGCGTTGTAACT+TGG + chr2.4:18087568-18087587 MS.gene065189:intron 45.0%
! CATGATTCACTTGTTGGGAC+CGG - chr2.4:18091144-18091163 None:intergenic 45.0%
! GTTGGAGTGCTTTGGTTTAC+CGG - chr2.4:18086493-18086512 None:intergenic 45.0%
! TTGTTCCTATTGTAGTGGGG+TGG + chr2.4:18089651-18089670 MS.gene065189:intron 45.0%
! TTTTACCCAGCCACTTACAC+TGG + chr2.4:18089569-18089588 MS.gene065189:intron 45.0%
! TTTTGTTCGTCTCCCAAGAC+TGG + chr2.4:18089323-18089342 MS.gene065189:intron 45.0%
!! GCAACTTATTTCTGCTGAGC+CGG + chr2.4:18091122-18091141 MS.gene065189:CDS 45.0%
!! TTAGCAGGTTGATTGACACG+TGG + chr2.4:18089084-18089103 MS.gene065189:intron 45.0%
!!! GAGCCTTTTTCGGATGCATT+TGG + chr2.4:18087033-18087052 MS.gene065189:CDS 45.0%
!!! TTGTTTTGGGACTAAGTCCC+AGG + chr2.4:18089483-18089502 MS.gene065189:intron 45.0%
AAAGATGCGGCGGACCATAT+AGG + chr2.4:18089919-18089938 MS.gene065189:CDS 50.0%
AATCCCCAGTGTCTGGAAGT+TGG - chr2.4:18091014-18091033 None:intergenic 50.0%
ACTAGATGTGCCCTCTGTGA+TGG + chr2.4:18090499-18090518 MS.gene065189:intron 50.0%
AGATAGTGACGCATCTGAGG+AGG + chr2.4:18091044-18091063 MS.gene065189:CDS 50.0%
AGATGTTGTGCTGAAGGGTG+TGG + chr2.4:18089244-18089263 MS.gene065189:CDS 50.0%
ATACGACCAGTGTAAGTGGC+TGG - chr2.4:18089578-18089597 None:intergenic 50.0%
CAACACGAAGTGAGGAGAGA+AGG - chr2.4:18090013-18090032 None:intergenic 50.0%
CAAGGCAGTTGACCATAACC+AGG + chr2.4:18090876-18090895 MS.gene065189:CDS 50.0%
CAAGGTTGCTCCAATTCCAG+GGG + chr2.4:18089130-18089149 MS.gene065189:CDS 50.0%
CTGACCAACTTCCAGACACT+GGG + chr2.4:18091007-18091026 MS.gene065189:CDS 50.0%
CTGCTTGGGCAACAAAAGGA+TGG + chr2.4:18088578-18088597 MS.gene065189:CDS 50.0%
CTTGCATGGAATGCTAGCGT+TGG - chr2.4:18088628-18088647 None:intergenic 50.0%
CTTTAATGGCAGCAGATGCC+TGG - chr2.4:18090897-18090916 None:intergenic 50.0%
GAGCGAAACGTTAACCTCTC+CGG + chr2.4:18086471-18086490 MS.gene065189:CDS 50.0%
GCAAGGTTGCTCCAATTCCA+GGG + chr2.4:18089129-18089148 MS.gene065189:CDS 50.0%
GCAGAAGCTGATGAAGCAGA+TGG + chr2.4:18087803-18087822 MS.gene065189:CDS 50.0%
TACGACCAGTGTAAGTGGCT+GGG - chr2.4:18089577-18089596 None:intergenic 50.0%
TGACCAACTTCCAGACACTG+GGG + chr2.4:18091008-18091027 MS.gene065189:CDS 50.0%
TGACCCTTACGGTTACGAAC+GGG - chr2.4:18086597-18086616 None:intergenic 50.0%
TGCAAGGTTGCTCCAATTCC+AGG + chr2.4:18089128-18089147 MS.gene065189:CDS 50.0%
TGGATGGATCCTGCTCAGAT+GGG - chr2.4:18091086-18091105 None:intergenic 50.0%
TTTGCTGCGGTCATAAGGTC+AGG - chr2.4:18090745-18090764 None:intergenic 50.0%
! ACTCAATGGCTTTTCCAGGG+TGG + chr2.4:18090715-18090734 MS.gene065189:intron 50.0%
! AGTGCTTTGGTTTACCGGAG+AGG - chr2.4:18086488-18086507 None:intergenic 50.0%
! CATCCTTTTGTTGCCCAAGC+AGG - chr2.4:18088580-18088599 None:intergenic 50.0%
! GTGTTGCTAGCCCTTTCCTT+TGG - chr2.4:18087375-18087394 None:intergenic 50.0%
! TCTGGTGGATGGAAGCTCTT+TGG - chr2.4:18086643-18086662 None:intergenic 50.0%
! TTAGCGTCGTTGGAGTGCTT+TGG - chr2.4:18086501-18086520 None:intergenic 50.0%
!! TGCCAGACTTTTGTTTCCCC+TGG - chr2.4:18089149-18089168 None:intergenic 50.0%
ACGTGTTCAGTGTGCGACAC+GGG - chr2.4:18087303-18087322 None:intergenic 55.0%
AGCACTCCAACGACGCTAAC+CGG + chr2.4:18086502-18086521 MS.gene065189:CDS 55.0%
ATTGCTCCGGTTAGCGTCGT+TGG - chr2.4:18086511-18086530 None:intergenic 55.0%
CAACAGGGTGACACACTACC+TGG - chr2.4:18087928-18087947 None:intergenic 55.0%
CCTTACGGTTACGAACGGGT+CGG - chr2.4:18086593-18086612 None:intergenic 55.0%
CGACCCGTTCGTAACCGTAA+GGG + chr2.4:18086591-18086610 MS.gene065189:CDS 55.0%
CGCGGAGGAGGGACAAAAAA+GGG - chr2.4:18090802-18090821 None:intergenic 55.0%
CGGTCTTGGAGTCATTGCTC+CGG - chr2.4:18086524-18086543 None:intergenic 55.0%
CTTACGGTTACGAACGGGTC+GGG - chr2.4:18086592-18086611 None:intergenic 55.0%
GACGTGTTCAGTGTGCGACA+CGG - chr2.4:18087304-18087323 None:intergenic 55.0%
GAGCATACATGGGTTTGGGC+TGG - chr2.4:18089795-18089814 None:intergenic 55.0%
GCTGACCAACTTCCAGACAC+TGG + chr2.4:18091006-18091025 MS.gene065189:CDS 55.0%
GTACATCTTGAGACGGCGGA+CGG - chr2.4:18086565-18086584 None:intergenic 55.0%
GTGGATGGATCCTGCTCAGA+TGG - chr2.4:18091087-18091106 None:intergenic 55.0%
TAAGGTCAGGTTCACCACCC+TGG - chr2.4:18090732-18090751 None:intergenic 55.0%
TCAGATGGGACCTCAGTGGA+TGG - chr2.4:18091072-18091091 None:intergenic 55.0%
TCAGTGTGCGACACGGGTAA+GGG - chr2.4:18087297-18087316 None:intergenic 55.0%
TCGCGGAGGAGGGACAAAAA+AGG - chr2.4:18090803-18090822 None:intergenic 55.0%
TGAGGAGGATCCATCCACTG+AGG + chr2.4:18091059-18091078 MS.gene065189:CDS 55.0%
TGGCAGCAGATGCCTGGTTA+TGG - chr2.4:18090891-18090910 None:intergenic 55.0%
TTCAGTGTGCGACACGGGTA+AGG - chr2.4:18087298-18087317 None:intergenic 55.0%
! GTTGTGCTGAAGGGTGTGGT+AGG + chr2.4:18089248-18089267 MS.gene065189:intron 55.0%
AGGCTCCTCAGACTCGGACA+AGG - chr2.4:18090833-18090852 None:intergenic 60.0%
CACTGAGGTCCCATCTGAGC+AGG + chr2.4:18091074-18091093 MS.gene065189:CDS 60.0%
CCGACCCGTTCGTAACCGTA+AGG + chr2.4:18086590-18086609 MS.gene065189:CDS 60.0%
CTGCTCAGATGGGACCTCAG+TGG - chr2.4:18091076-18091095 None:intergenic 60.0%
GGATGCCTTGTCCGAGTCTG+AGG + chr2.4:18090825-18090844 MS.gene065189:CDS 60.0%
! TCGGACAAGGCATCCTGTCG+CGG - chr2.4:18090820-18090839 None:intergenic 60.0%
! TTTTGTCCCTCCTCCGCGAC+AGG + chr2.4:18090804-18090823 MS.gene065189:CDS 60.0%
AGGCATCCTGTCGCGGAGGA+GGG - chr2.4:18090813-18090832 None:intergenic 65.0%
CATCTTGAGACGGCGGACGG+TGG - chr2.4:18086562-18086581 None:intergenic 65.0%
GGCGGAACGCTTCTCGGTCT+TGG - chr2.4:18086538-18086557 None:intergenic 65.0%
TGCGGCGGACCATATAGGCG+AGG + chr2.4:18089924-18089943 MS.gene065189:CDS 65.0%
! AAGGCATCCTGTCGCGGAGG+AGG - chr2.4:18090814-18090833 None:intergenic 65.0%
! GACAAGGCATCCTGTCGCGG+AGG - chr2.4:18090817-18090836 None:intergenic 65.0%
CTTGAGACGGCGGACGGTGG+CGG - chr2.4:18086559-18086578 None:intergenic 70.0%
! GGTGGCGGCGGAACGCTTCT+CGG - chr2.4:18086544-18086563 None:intergenic 70.0%
!! GAGACGGCGGACGGTGGCGG+CGG - chr2.4:18086556-18086575 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 18086456 18091164 18086456 ID=MS.gene065189
chr2.4 mRNA 18086456 18091164 18086456 ID=MS.gene065189.t1;Parent=MS.gene065189
chr2.4 exon 18086456 18086687 18086456 ID=MS.gene065189.t1.exon1;Parent=MS.gene065189.t1
chr2.4 CDS 18086456 18086687 18086456 ID=cds.MS.gene065189.t1;Parent=MS.gene065189.t1
chr2.4 exon 18086783 18086916 18086783 ID=MS.gene065189.t1.exon2;Parent=MS.gene065189.t1
chr2.4 CDS 18086783 18086916 18086783 ID=cds.MS.gene065189.t1;Parent=MS.gene065189.t1
chr2.4 exon 18087006 18087135 18087006 ID=MS.gene065189.t1.exon3;Parent=MS.gene065189.t1
chr2.4 CDS 18087006 18087135 18087006 ID=cds.MS.gene065189.t1;Parent=MS.gene065189.t1
chr2.4 exon 18087768 18087928 18087768 ID=MS.gene065189.t1.exon4;Parent=MS.gene065189.t1
chr2.4 CDS 18087768 18087928 18087768 ID=cds.MS.gene065189.t1;Parent=MS.gene065189.t1
chr2.4 exon 18088358 18088459 18088358 ID=MS.gene065189.t1.exon5;Parent=MS.gene065189.t1
chr2.4 CDS 18088358 18088459 18088358 ID=cds.MS.gene065189.t1;Parent=MS.gene065189.t1
chr2.4 exon 18088565 18088669 18088565 ID=MS.gene065189.t1.exon6;Parent=MS.gene065189.t1
chr2.4 CDS 18088565 18088669 18088565 ID=cds.MS.gene065189.t1;Parent=MS.gene065189.t1
chr2.4 exon 18088843 18088971 18088843 ID=MS.gene065189.t1.exon7;Parent=MS.gene065189.t1
chr2.4 CDS 18088843 18088971 18088843 ID=cds.MS.gene065189.t1;Parent=MS.gene065189.t1
chr2.4 exon 18089125 18089265 18089125 ID=MS.gene065189.t1.exon8;Parent=MS.gene065189.t1
chr2.4 CDS 18089125 18089265 18089125 ID=cds.MS.gene065189.t1;Parent=MS.gene065189.t1
chr2.4 exon 18089901 18090001 18089901 ID=MS.gene065189.t1.exon9;Parent=MS.gene065189.t1
chr2.4 CDS 18089901 18090001 18089901 ID=cds.MS.gene065189.t1;Parent=MS.gene065189.t1
chr2.4 exon 18090332 18090389 18090332 ID=MS.gene065189.t1.exon10;Parent=MS.gene065189.t1
chr2.4 CDS 18090332 18090389 18090332 ID=cds.MS.gene065189.t1;Parent=MS.gene065189.t1
chr2.4 exon 18090733 18091164 18090733 ID=MS.gene065189.t1.exon11;Parent=MS.gene065189.t1
chr2.4 CDS 18090733 18091164 18090733 ID=cds.MS.gene065189.t1;Parent=MS.gene065189.t1
Gene Sequence

>MS.gene065189

ATGGCGAAGAAGAAAGAGCGAAACGTTAACCTCTCCGGTAAACCAAAGCACTCCAACGACGCTAACCGGAGCAATGACTCCAAGACCGAGAAGCGTTCCGCCGCCACCGTCCGCCGTCTCAAGATGTACAAAACCCGACCCGTTCGTAACCGTAAGGGTCATGTCTTGAGCAACGAGTTTCAATCCAAAGAGCTTCCATCCACCAGAATTAAACCCGATCGTCAATGGTTCGGTATGTTCAATTTGAGGGATTCGATTTTGTTCATTGTGATTCTTCAAATTCAGCTTGTGAATTTTAGGGTTTTGGTTTGGTTTTGTGATTTGTAGGGAATACTCGTGTTGTGAATCAGAAAGAGCTTGAGTTTTTCAGAGAAGAAATGGCGAAGCATAGTGCAAGTAATTACAATATTATTCTTAAGGGGAAGAATTTGCCTATGTCGCTTCTCAATGATTATCAGAAGGTTTGTTTGTTTCTTCGTGAACTGCTTAATTGTTGAAATGGTTTGGTGAATTATGTGAATTTATTGGTTTATGGTTGTGAATATTGTAGCAATCGAGGGTTCATCTTCTTGATAGAGAGCCTTTTTCGGATGCATTTGGACCTAAGACTAAAAGAAAGCGACCAAGTCTTTTAGCTTCTGATTATGAGGCTTTAGCTAAGAAAGCTGATGGTTCTCAAGGTAGAAATCTGATTTCGATATAAATTCTGTTTTGTTGTGCTAAAAGATATGTTTTTCTTTAGAAAGTTAAAGATAATCTATGTAGCACGCACACGTCAATACTGAAAATAATTTGTAAAAGTGACATAATCGAATGTAATCACATGTGTCGTGCTTGACCCTTACCCGTGTCGCACACTGAACACGTCTTAAATCATGAGTGTCAGTACTACAAAGAAAATAATAGTTTCTTAAAACCAAAGGAAAGGGCTAGCAACACTTACTTCAATGCTATTACTTCAAAGGAAAGGGCTAAGCAACACTTCAATGCTATTTTTCCAACCATGAGTCTTTTATTTGGTGAAATTCACGTATGTTCTACAACTTTATGTTGCTAACACTTCTCTAAAACCAAATTATTTAAGGAAGAACATGAAAGGGGTTTATTTAGCTCATCCATAGGCGTTGTAACTTGGTTACTTGTTTTACATTTGTGTGTTCAGTTTATTTGCTTAATAAAGAATGGTTGATGCAGTTTTCTGTTTCCTTAGTGGGAATACTTGTTGATATTTGATATGTTTCTTTGACCAAATGATGTTGTTTTTAACCTGATAACTGTTTTTGTGTTTTTCCTACATTACTTTCGTTTGCAGATGCTTTCGAAGAGAAGTATGCTTCTGGTACGGCTGCAGAAGCTGATGAAGCAGATGGATTTAGAGATTTAGTGCGACATACCATGTTTGAGAAGGGTCAAAGCAAACGCATATGGGGTGAACTTTACAAAGTGATAGATTCTTCGGATGTTGTTGTCCAGGTAGTGTGTCACCCTGTTGCTAAAACTTTGTTTAACTCTTCACCTTTCTATGTTGATGGATTGTGACCTGACAAGCATTTATGTGTTTCCATTGTTTAATATTATTGTGATAATGTTAAAAAATTACGCTTTATGATGTGTATTTCTGCTGCAAATCTGCATGCTATATTGCTCTGTTAATGTGAAGTACGGACATTGTTATGAATTTGAATAAAGTTTGTCATAGTAAAATAAGGGAAAAAACTAGAAGTTGGGAGCTCATGCGTTACACTGATAAAGCATTTTTATTTTTCTTAATATGATTGTTTCATGCTTATTTAAGTTGATGAATCCATGGTTGGTCGAATTTGTTTGACTTTTAGATTCGCAGCAGATATCACACACTTTTGTCTTCAAATCTTTGAAAGTATTGTATCTGTCCTGATACAGGTTATAGATGCAAGGGATCCACAAGGCACAAGATGTTATCATTTAGAGAAGCATTTGAAAGAAAATTGCAAGCACAAACACATGGTGCTTTTATTGAACAAGGTAAGTAATATCTTTTTTTGCTCCTTTTGTTTTAAATTGTTCCTCGATACCCTTAATTTATTTCTTTACATTATAAATCATTTCAAATCCTCATTCTTTTTGCAGTGCGATCTAATTCCTGCTTGGGCAACAAAAGGATGGCTTAGAGTTTTGTCAAAAGAATATCCAACGCTAGCATTCCATGCAAGTATTAATAAGTCCTTTGGAAAGGTATACTTTTGACTTCATCTTTAGTTGATTTGTTGGCCAATTTCCAGTAATGCGTTAATCAATGAATAAAAAAGACAAGTGAAGCTGGAGATAATCATCTCCTTTTCTCTCCATTAACACTTGTATACCTTCAGCTATTTGCTATCTTATTTATTGCTCATTATCATGCTTAGGGTTCACTTCTATCGGTTCTAAGACAATTTGCAAGATTGAAAAGTGATAAGCAAGCAATATCTGTTGGTTTTGTTGGATATCCAAATGTTGGGAAGTCATCAGTGATCAACACATTGCGTACAAAGAATGTAATCTTTCTTTTTCCTTCACTGCTTCTTATTTCCTGCTTAAGTTTTAATTAGGAGATGAGTTAAAGCATAGAAGTACAAGTATATTTGCAACTCCAGAATTATAAGTATTTTAGCAGGTTGATTGACACGTGGCCGATTAATATGTCATAGGTTTGCAAGGTTGCTCCAATTCCAGGGGAAACAAAAGTCTGGCAGTATATTACCCTTACAAAGAGGATCTTTTTGATTGATTGTCCAGGAGTTGTCTACCACAACAATGACTCTGAAACAGATGTTGTGCTGAAGGGTGTGGTAGGTTTTCTCTTGTTTCCTTTTTACTTTGGTTGCGTGATACTTCAATAAAGAATATTTTGTTCGTCTCCCAAGACTGGATGTGCAAACATAATTTATTTGAATCTGAACGATATTTGAAAGATTACTAAACAATCATGTTGGTTGTAGACCAATCAGCCTTGTGATACATCCTATATTTTTCTGGTTTTTGAACTTGTGATATATTATTCATGTGTTGTTTTGGGACTAAGTCCCAGGAAGAGCTATTCTTAGATTTTGTTAGATTTAATATTGACTAGCATATTACCTATGTGGCTGTCATTTTACCCAGCCACTTACACTGGTCGTATATTAAGAATTATTCATGCCCACAGAATATAAATTCATTATATAGTGTATAATATTGTTCCTATTGTAGTGGGGTGGTCATATACTCATATTTTAATGGAATTTAATTTTTTAATTAATATTTGAAATAATATTTTTAAAAGATAAAATAGTAAATAAAATAGTTTAAATGAGGGTAAAATATGTAAGAAAAATGCCAGCCCAAACCCATGTATGCTCTTTATATTATATATAGTATAGATATAGTATAGATTATTATCGTTGTTGTTGTTGTTGTTGTGGCTTAATACTTTACTTATTTTCAGGTTCGTGTAACAAACTTGAAAGATGCGGCGGACCATATAGGCGAGGTTTTGAAACGTGTGAAGAAGGAGCACTTGACAAGAGCTTATAAAATAAAAGAATGGTATTGTTCCTTCTCTCCTCACTTCGTGTTGAATAGTAGATCTTCATATAGTGTGTCCAACTTTTATATTCTTGTTTTTGCTAAGAACAACATATTATTTAAAAGCTTTTGTTAGATTTTAATTTTTCTTTGCTGTAGTTCAAGCATCTTGTAAGGAATTATGAACAGTAAGGTGGTGATGATATGATTATTCTTGATGCGACTTTACATGCCATTTATACTGGCCTGGATTTGGTTATCTGTGTATTATTATAGCTTGTTTATAATGTAACAATAGTAGCTTGTATACAAAAACTAGGTATTTAATAATGCCATATATCTTGTCATCAGGGTTGATGAAAATGACTTCCTACTTCAGCTTTGCAAATCATCTGGCAAACTCCTTAAGGTATTCTTTTTGAATTGATCTAAATTCTTACTTTGATATTAAAAAAAAGGTTGTCTAGACTGATCATCAGCTTTATTAGTATACTCTAGCTTTCCTCAATTTGACTTAGACTAGATGTGCCCTCTGTGATGGAGCTAAAGAAACACATTTTTCATCTCTTGATCTTCTGCTTGCTTTATAGAAGAAATCAGTGAACTTCAATTACTAATTTTTCCCTTTATGTTACAGCATGTCAAATCGTTTCATTTAGTTACTCTTCCAATTTGTTTTTCTTGAACTTTTATATTTCTTATGTAAGACAAGGTTACACTTTGATGCGACTTTTACTCAATGGCTTTTCCAGGGTGGTGAACCTGACCTTATGACCGCAGCAAAGATGATACTTCACGATTGGCAGAGGGGTAAAATTCCCTTTTTTGTCCCTCCTCCGCGACAGGATGCCTTGTCCGAGTCTGAGGAGCCTAATGTTAATGGCATAGATGTTGACAAGGCAGTTGACCATAACCAGGCATCTGCTGCCATTAAAGCTATTGCAAATGTTCTTTCGTCCCAGCAGCAAAGAAATGTACCAGTTCAAGGGGATTTATATAACGAGAATGAGCTGAATGAAGAAACTGCTGACCAACTTCCAGACACTGGGGATTATACAGATGAAGATAGTGACGCATCTGAGGAGGATCCATCCACTGAGGTCCCATCTGAGCAGGATCCATCCACTGATGTTCCATCTGAGCAACTTATTTCTGCTGAGCCGGTCCCAACAAGTGAATCATGA
Protein sequence

>MS.gene065189.t1

MAKKKERNVNLSGKPKHSNDANRSNDSKTEKRSAATVRRLKMYKTRPVRNRKGHVLSNEFQSKELPSTRIKPDRQWFGNTRVVNQKELEFFREEMAKHSASNYNIILKGKNLPMSLLNDYQKQSRVHLLDREPFSDAFGPKTKRKRPSLLASDYEALAKKADGSQDAFEEKYASGTAAEADEADGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVIDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKCDLIPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYHNNDSETDVVLKGVVRVTNLKDAADHIGEVLKRVKKEHLTRAYKIKEWVDENDFLLQLCKSSGKLLKGGEPDLMTAAKMILHDWQRGKIPFFVPPPRQDALSESEEPNVNGIDVDKAVDHNQASAAIKAIANVLSSQQQRNVPVQGDLYNENELNEETADQLPDTGDYTDEDSDASEEDPSTEVPSEQDPSTDVPSEQLISAEPVPTSES