Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029415.t1 | XP_003592650.1 | 98.7 | 694 | 9 | 0 | 1 | 694 | 38 | 731 | 0.00E+00 | 1241.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029415.t1 | Q9ZPV5 | 68.9 | 559 | 171 | 2 | 22 | 577 | 72 | 630 | 7.5e-209 | 728.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029415.t1 | G7ID95 | 98.7 | 694 | 9 | 0 | 1 | 694 | 38 | 731 | 0.0e+00 | 1241.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029415.t1 | MTR_1g110560 | 98.703 | 694 | 9 | 0 | 1 | 694 | 38 | 731 | 0.0 | 1428 |
| MS.gene029415.t1 | MTR_6g033410 | 36.245 | 538 | 314 | 10 | 32 | 558 | 145 | 664 | 8.25e-102 | 327 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029415.t1 | AT2G18220 | 63.775 | 657 | 215 | 5 | 13 | 653 | 63 | 712 | 0.0 | 843 |
| MS.gene029415.t1 | AT3G55510 | 33.017 | 527 | 342 | 6 | 36 | 555 | 63 | 585 | 3.97e-95 | 306 |
| MS.gene029415.t1 | AT3G55510 | 33.268 | 511 | 330 | 6 | 56 | 559 | 8 | 514 | 3.73e-94 | 301 |
Find 130 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAGGTGTCTCTTCATTTC+TGG | 0.080261 | 1.4:-84333399 | MS.gene029415:intron |
| TGCATAGATGATTGCTTTAA+AGG | 0.165421 | 1.4:-84333301 | MS.gene029415:CDS |
| TGCAAATCAATTAAAGAAAA+TGG | 0.219753 | 1.4:-84334228 | MS.gene029415:CDS |
| ACCAGTATCTATGCTCCTTT+TGG | 0.248004 | 1.4:-84332544 | MS.gene029415:CDS |
| TTGTTGAAGCTTCCTGCTTC+TGG | 0.303506 | 1.4:-84334039 | MS.gene029415:CDS |
| TCAGGTGTCTCTTCATTTCT+GGG | 0.315570 | 1.4:-84333398 | MS.gene029415:intron |
| GAGTTACTCTGTTGGGTTCA+TGG | 0.318367 | 1.4:-84332271 | MS.gene029415:CDS |
| TAAAGTTATAACCACTTCTA+TGG | 0.321812 | 1.4:-84334262 | MS.gene029415:CDS |
| AAAATATTCTTCATTGTTGT+TGG | 0.346316 | 1.4:-84333869 | MS.gene029415:CDS |
| TCTCTTCATTTCTGGGGTAC+TGG | 0.358919 | 1.4:-84333391 | MS.gene029415:CDS |
| ACGAATATGTTTAAGTTTCA+CGG | 0.360986 | 1.4:+84333237 | None:intergenic |
| GAGCAATACTTGTCATTTCC+AGG | 0.362820 | 1.4:+84331164 | None:intergenic |
| AGTTCCATCCACGTTCTCTT+TGG | 0.366087 | 1.4:+84331211 | None:intergenic |
| TCATTAACTCTCTTGAGCTT+TGG | 0.367280 | 1.4:-84332740 | MS.gene029415:CDS |
| ACAAAACAATGGAGGACTTA+TGG | 0.369094 | 1.4:-84333982 | MS.gene029415:CDS |
| AGACAAAGCATAAAACAAAA+AGG | 0.374855 | 1.4:-84330815 | MS.gene029415:CDS |
| CTGTCCTAAAAGCCCTCATC+AGG | 0.374975 | 1.4:+84334184 | None:intergenic |
| GATGATGCCGCAGGATCATT+AGG | 0.378915 | 1.4:+84331995 | None:intergenic |
| CACTGTGGAGTTACTCTGTT+GGG | 0.380617 | 1.4:-84332278 | MS.gene029415:CDS |
| CAAGGTAGGACTTCACAATA+TGG | 0.381844 | 1.4:+84333959 | None:intergenic |
| AAAATTTCCAGTGTTCTTGT+TGG | 0.383029 | 1.4:-84331305 | MS.gene029415:intron |
| GTACCTTGATATATTTCCTT+AGG | 0.386131 | 1.4:+84333830 | None:intergenic |
| CTTTGCCAACGCCTCCTGTA+GGG | 0.396984 | 1.4:+84332490 | None:intergenic |
| CATTTCTGGGGTACTGGTGG+AGG | 0.417756 | 1.4:-84333385 | MS.gene029415:CDS |
| TCTTCGAAACCTTTCAACTT+TGG | 0.426560 | 1.4:+84332200 | None:intergenic |
| GCAGAAGGGCTGTCGCTTGA+AGG | 0.432094 | 1.4:+84330888 | None:intergenic |
| AACTGCGTCATTGAACTTCT+CGG | 0.432785 | 1.4:-84333205 | MS.gene029415:CDS |
| GTTGACTGTACTTAATGAAA+TGG | 0.436589 | 1.4:-84334079 | MS.gene029415:CDS |
| CGCTTAGGTTGAGATGTATC+CGG | 0.438642 | 1.4:-84332605 | MS.gene029415:CDS |
| GTTTCACGGCATTTACGAAA+TGG | 0.440988 | 1.4:+84333251 | None:intergenic |
| CAGCTAGGTACTTTCCGCTT+AGG | 0.444221 | 1.4:-84332620 | MS.gene029415:CDS |
| GCAAATCAATTAAAGAAAAT+GGG | 0.446925 | 1.4:-84334227 | MS.gene029415:CDS |
| TAGATACTGGTACAAAAGAA+TGG | 0.450220 | 1.4:+84332556 | None:intergenic |
| TTTAGGACAGCATGCCACTA+TGG | 0.450538 | 1.4:-84334171 | MS.gene029415:CDS |
| TCACTGAACTTAAGCAGATC+CGG | 0.454118 | 1.4:+84335417 | None:intergenic |
| TGATTTACGCAGCATATTGA+AGG | 0.459394 | 1.4:-84332463 | MS.gene029415:intron |
| TTGTGCATCTGTATTGGATC+TGG | 0.460491 | 1.4:-84333325 | MS.gene029415:CDS |
| TTTAGCTCATCCTGGTTACC+TGG | 0.468220 | 1.4:-84331182 | MS.gene029415:CDS |
| CAGCAATCTGGTTCAACATC+CGG | 0.468912 | 1.4:+84332586 | None:intergenic |
| CGCAGGATCATTAGGTAGAA+AGG | 0.471731 | 1.4:+84332003 | None:intergenic |
| TCAAGCGACAGCCCTTCTGC+CGG | 0.472007 | 1.4:-84330885 | MS.gene029415:CDS |
| AGGAATAAATCTCACACCTA+AGG | 0.472641 | 1.4:-84330786 | None:intergenic |
| AAGTTGCGCAACCTCACAAT+TGG | 0.474304 | 1.4:+84332234 | None:intergenic |
| TCCAAAAGGAGCATAGATAC+TGG | 0.475479 | 1.4:+84332543 | None:intergenic |
| CCACTTCTATGGTTGATTTG+TGG | 0.479032 | 1.4:-84334251 | MS.gene029415:CDS |
| CTTGTCATTTCCAGGTAACC+AGG | 0.479894 | 1.4:+84331172 | None:intergenic |
| CTTCATTTCTGGGGTACTGG+TGG | 0.480769 | 1.4:-84333388 | MS.gene029415:CDS |
| TGCGGTTCGTTCCCTGATGA+GGG | 0.483874 | 1.4:-84334196 | MS.gene029415:CDS |
| ATGAATAGACACGAAACAAC+AGG | 0.485209 | 1.4:+84333355 | None:intergenic |
| AATGGGTAGAAGCAGCAATC+TGG | 0.490303 | 1.4:+84332574 | None:intergenic |
| TGATGATGTTGTGGAGGACT+TGG | 0.492880 | 1.4:-84330940 | MS.gene029415:CDS |
| TGGAAGAAAAGAGATCATAA+TGG | 0.493687 | 1.4:-84334016 | MS.gene029415:CDS |
| ATGCGGTTCGTTCCCTGATG+AGG | 0.495163 | 1.4:-84334197 | MS.gene029415:CDS |
| AAGTGCATCCCTTAAAATCA+TGG | 0.500234 | 1.4:+84333129 | None:intergenic |
| AGAGAGTTGTGCATCTGTAT+TGG | 0.501253 | 1.4:-84333331 | MS.gene029415:CDS |
| CAAGCGACAGCCCTTCTGCC+GGG | 0.504148 | 1.4:-84330884 | MS.gene029415:CDS |
| GCTCCTAAGGAAATATATCA+AGG | 0.505109 | 1.4:-84333833 | MS.gene029415:intron |
| CTGCTGCATTTAGCTCATCC+TGG | 0.510196 | 1.4:-84331190 | MS.gene029415:CDS |
| GCAAATTGACCAAAGTTGAA+AGG | 0.512230 | 1.4:-84332209 | MS.gene029415:CDS |
| ACGACTCATTAAAGGAATCC+AGG | 0.512258 | 1.4:-84331416 | MS.gene029415:intron |
| TTGAAGCTTCCTGCTTCTGG+TGG | 0.513192 | 1.4:-84334036 | MS.gene029415:CDS |
| CAACAGCCTACTGAACCAAA+AGG | 0.514963 | 1.4:-84331002 | MS.gene029415:CDS |
| TTTGCCAACGCCTCCTGTAG+GGG | 0.515868 | 1.4:+84332491 | None:intergenic |
| AGATACTGGTACAAAAGAAT+GGG | 0.517124 | 1.4:+84332557 | None:intergenic |
| GCTTTGCCAACGCCTCCTGT+AGG | 0.518176 | 1.4:+84332489 | None:intergenic |
| CTCCACAACATCATCATCAA+TGG | 0.522343 | 1.4:+84330947 | None:intergenic |
| TTCTGTGGTTGAAGAACTTG+CGG | 0.526193 | 1.4:-84332310 | MS.gene029415:CDS |
| GTGGATGATGACATGGAAGA+TGG | 0.527004 | 1.4:-84334351 | MS.gene029415:CDS |
| CAGAGTAACTCCACAGTGCT+AGG | 0.529878 | 1.4:+84332283 | None:intergenic |
| AATGCCCGTGTCTTAAGAGT+TGG | 0.530371 | 1.4:+84332351 | None:intergenic |
| GAAATGGCAATTCAAAACAT+AGG | 0.534559 | 1.4:+84333267 | None:intergenic |
| CAGTCATTTGATTCAAAATG+TGG | 0.535572 | 1.4:+84333926 | None:intergenic |
| GGAGGATACTAAAGAGAATG+AGG | 0.540305 | 1.4:-84331237 | MS.gene029415:CDS |
| CAGGTGTCTCTTCATTTCTG+GGG | 0.543367 | 1.4:-84333397 | MS.gene029415:CDS |
| CCTAGCTGTGGGAACTAGAC+GGG | 0.544301 | 1.4:+84332635 | None:intergenic |
| CTTTGCTTCAATCACAACCA+TGG | 0.546322 | 1.4:+84336108 | None:intergenic |
| GCACTGTGGAGTTACTCTGT+TGG | 0.548474 | 1.4:-84332279 | MS.gene029415:CDS |
| GATTGAAGCAAAGCAACATA+AGG | 0.549356 | 1.4:-84336098 | MS.gene029415:CDS |
| ATATATTTCCTTAGGAGCGA+AGG | 0.556004 | 1.4:+84333838 | None:intergenic |
| TCTCATCATCATCACCATAG+TGG | 0.557196 | 1.4:+84334157 | None:intergenic |
| CACTGAACTTAAGCAGATCC+GGG | 0.560310 | 1.4:+84335418 | None:intergenic |
| TGATATCATTTACTTTACAT+CGG | 0.560340 | 1.4:-84333894 | MS.gene029415:CDS |
| TCATCTCCAGCATATCCAAA+AGG | 0.562573 | 1.4:+84332529 | None:intergenic |
| TTGCCAACGCCTCCTGTAGG+GGG | 0.569919 | 1.4:+84332492 | None:intergenic |
| CTACTGAACCAAAAGGAAAG+AGG | 0.572500 | 1.4:-84330995 | MS.gene029415:CDS |
| TGCCATTGATGATGATGTTG+TGG | 0.573586 | 1.4:-84330949 | MS.gene029415:CDS |
| GGAATAAATCTCACACCTAA+GGG | 0.576466 | 1.4:-84330785 | None:intergenic |
| GATGCCAAAGAGAACGTGGA+TGG | 0.579919 | 1.4:-84331215 | MS.gene029415:CDS |
| AAAGGTTTCGAAGAGAAATG+AGG | 0.583015 | 1.4:-84332191 | MS.gene029415:CDS |
| ACTGTACTTAATGAAATGGA+TGG | 0.588834 | 1.4:-84334075 | MS.gene029415:CDS |
| TAAGACACGGGCATTTCAAG+AGG | 0.589841 | 1.4:-84332343 | MS.gene029415:CDS |
| AAATGTGGAGAGCATTTCCA+AGG | 0.591878 | 1.4:+84333941 | None:intergenic |
| CATGGAAGATGGAGAACCAC+AGG | 0.594124 | 1.4:-84334340 | MS.gene029415:CDS |
| CATATTGTGAAGTCCTACCT+TGG | 0.595814 | 1.4:-84333958 | MS.gene029415:CDS |
| TCAAGAAAAGATGATGCCGC+AGG | 0.596185 | 1.4:+84331986 | None:intergenic |
| AAGCGGAAAGTACCTAGCTG+TGG | 0.600642 | 1.4:+84332623 | None:intergenic |
| CCACAAATCAACCATAGAAG+TGG | 0.600691 | 1.4:+84334251 | None:intergenic |
| TGAGAAGGCTATTGAGCATG+AGG | 0.603012 | 1.4:-84334313 | MS.gene029415:CDS |
| CTTTCTACCTAATGATCCTG+CGG | 0.603597 | 1.4:-84332002 | MS.gene029415:CDS |
| GTGGAGAGCATTTCCAAGGT+AGG | 0.605480 | 1.4:+84333945 | None:intergenic |
| TGAGCATGAGGTTCAAGCAA+AGG | 0.611999 | 1.4:-84334301 | MS.gene029415:CDS |
| AGAACCACAGGTAGATGAGA+AGG | 0.612954 | 1.4:-84334328 | MS.gene029415:CDS |
| ACCTAGCTGTGGGAACTAGA+CGG | 0.614017 | 1.4:+84332634 | None:intergenic |
| ATACTTTGATAGTGCACTAG+AGG | 0.618108 | 1.4:+84331473 | None:intergenic |
| AGCGGAAAGTACCTAGCTGT+GGG | 0.619264 | 1.4:+84332624 | None:intergenic |
| ATAGCCTTCTCATCTACCTG+TGG | 0.620098 | 1.4:+84334324 | None:intergenic |
| AGAATCAGCAAGTGATGAGG+AGG | 0.621827 | 1.4:-84331255 | MS.gene029415:CDS |
| GCAAGCCAACTCTTAAGACA+CGG | 0.624117 | 1.4:-84332356 | MS.gene029415:CDS |
| CAACTGTCGAATGAAAATGA+AGG | 0.625145 | 1.4:+84333153 | None:intergenic |
| ATTTGATGACCACAAAACAA+TGG | 0.630871 | 1.4:-84333993 | MS.gene029415:CDS |
| TGAAGAATCAGCAAGTGATG+AGG | 0.631498 | 1.4:-84331258 | MS.gene029415:CDS |
| CGTCATTGAACTTCTCGGAG+TGG | 0.634980 | 1.4:-84333200 | MS.gene029415:CDS |
| CCCGTCTAGTTCCCACAGCT+AGG | 0.637534 | 1.4:-84332635 | MS.gene029415:CDS |
| AAGGCGTGTTGATATGCAGT+CGG | 0.638450 | 1.4:+84333172 | None:intergenic |
| GGAAGATGTGGATGATGACA+TGG | 0.639734 | 1.4:-84334358 | MS.gene029415:CDS |
| CAGATTGTGAACTATAAGCA+CGG | 0.640362 | 1.4:+84332706 | None:intergenic |
| TGAGGATGCCAAAGAGAACG+TGG | 0.646565 | 1.4:-84331219 | MS.gene029415:CDS |
| AGAAAATGGGAGCTTAAATG+CGG | 0.652168 | 1.4:-84334214 | MS.gene029415:CDS |
| CAAGCCAACTCTTAAGACAC+GGG | 0.654132 | 1.4:-84332355 | MS.gene029415:CDS |
| AATAGAAAATCTTCAGCACA+AGG | 0.655625 | 1.4:-84336071 | MS.gene029415:intron |
| TAGACACGAAACAACAGGAA+GGG | 0.657156 | 1.4:+84333360 | None:intergenic |
| CATTGATGATGATGTTGTGG+AGG | 0.661802 | 1.4:-84330946 | MS.gene029415:CDS |
| TGATGACCACAAAACAATGG+AGG | 0.670885 | 1.4:-84333990 | MS.gene029415:CDS |
| AATGAGGCAGCTTATTCGCG+AGG | 0.672768 | 1.4:-84332175 | MS.gene029415:intron |
| AGATGAATGATGATCAACAT+CGG | 0.678740 | 1.4:+84330854 | None:intergenic |
| TGTCCTAAAAGCCCTCATCA+GGG | 0.678828 | 1.4:+84334185 | None:intergenic |
| GTACTTGAAAGAGAATGACC+CGG | 0.684135 | 1.4:-84335436 | MS.gene029415:CDS |
| CGGATACATCTCAACCTAAG+CGG | 0.685244 | 1.4:+84332606 | None:intergenic |
| ATAGACACGAAACAACAGGA+AGG | 0.702686 | 1.4:+84333359 | None:intergenic |
| TTGCGGAACACCTAGCACTG+TGG | 0.724336 | 1.4:-84332293 | MS.gene029415:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTGACAATTTTATTTTA+TGG | - | chr1.4:84334061-84334080 | MS.gene029415:CDS | 10.0% |
| !! | AAACTTATATTTAGCTATTA+AGG | + | chr1.4:84331148-84331167 | None:intergenic | 15.0% |
| !! | AAATTAAGAATAGTATCATT+CGG | - | chr1.4:84333316-84333335 | MS.gene029415:CDS | 15.0% |
| !! | ATTACCTTCTATATATTTAT+TGG | - | chr1.4:84331373-84331392 | MS.gene029415:intron | 15.0% |
| !! | CACTTGATATAATAAAATAA+AGG | + | chr1.4:84335279-84335298 | None:intergenic | 15.0% |
| !! | TAAAATAAAGGAAAAGAAAA+TGG | + | chr1.4:84335267-84335286 | None:intergenic | 15.0% |
| !! | TACAATTCTCAAATATAAAT+GGG | + | chr1.4:84335362-84335381 | None:intergenic | 15.0% |
| !! | TGATAAAAGTAAAACATAAA+AGG | + | chr1.4:84334768-84334787 | None:intergenic | 15.0% |
| !! | TTACAATTCTCAAATATAAA+TGG | + | chr1.4:84335363-84335382 | None:intergenic | 15.0% |
| !! | TTACCTTCTATATATTTATT+GGG | - | chr1.4:84331374-84331393 | MS.gene029415:intron | 15.0% |
| !!! | AAATTTTCTATCTTGATTAA+AGG | + | chr1.4:84332247-84332266 | None:intergenic | 15.0% |
| !!! | TTAATCAAGATAGAAAATTT+TGG | - | chr1.4:84332247-84332266 | MS.gene029415:CDS | 15.0% |
| !! | AAAAAAGGAACAAGAAATAT+TGG | + | chr1.4:84331796-84331815 | None:intergenic | 20.0% |
| !! | AAAAAGGAACAAGAAATATT+GGG | + | chr1.4:84331795-84331814 | None:intergenic | 20.0% |
| !! | AAAATATTCTTCATTGTTGT+TGG | - | chr1.4:84333025-84333044 | MS.gene029415:intron | 20.0% |
| !! | AAAATTAAATCTGTAGTGAA+TGG | + | chr1.4:84332061-84332080 | None:intergenic | 20.0% |
| !! | AACAATGTAATGTAATGTAA+TGG | + | chr1.4:84330855-84330874 | None:intergenic | 20.0% |
| !! | ACAATGTAATGTAATGTAAT+GGG | + | chr1.4:84330854-84330873 | None:intergenic | 20.0% |
| !! | AGTAAACAAATGAATGAAAA+AGG | + | chr1.4:84335010-84335029 | None:intergenic | 20.0% |
| !! | ATAAAACAAAAAGGTTGAAA+AGG | - | chr1.4:84336088-84336107 | MS.gene029415:CDS | 20.0% |
| !! | GCAAATCAATTAAAGAAAAT+GGG | - | chr1.4:84332667-84332686 | MS.gene029415:CDS | 20.0% |
| !! | TACATTAATTGAGATGAATA+TGG | - | chr1.4:84331565-84331584 | MS.gene029415:intron | 20.0% |
| !! | TATAGAAGTTTATTTGCTTA+AGG | + | chr1.4:84335099-84335118 | None:intergenic | 20.0% |
| !! | TATATAACATAACAGCAAAA+AGG | + | chr1.4:84332336-84332355 | None:intergenic | 20.0% |
| !! | TGATATCATTTACTTTACAT+CGG | - | chr1.4:84333000-84333019 | MS.gene029415:intron | 20.0% |
| !! | TGATTAAAAAGCTTAATAGA+TGG | - | chr1.4:84333226-84333245 | MS.gene029415:CDS | 20.0% |
| !! | TGCAAATCAATTAAAGAAAA+TGG | - | chr1.4:84332666-84332685 | MS.gene029415:CDS | 20.0% |
| !! | TTAACATATGTCTATTCATT+TGG | - | chr1.4:84333449-84333468 | MS.gene029415:intron | 20.0% |
| !! | TTAAGCAAATAAACTTCTAT+AGG | - | chr1.4:84335098-84335117 | MS.gene029415:intron | 20.0% |
| !!! | AACTAAATTTTTCTGAAATC+TGG | - | chr1.4:84333258-84333277 | MS.gene029415:CDS | 20.0% |
| !!! | ACTTTTGTTTGTTTTGTATT+AGG | - | chr1.4:84331731-84331750 | MS.gene029415:intron | 20.0% |
| !!! | GCTATTAAGTTATTTCATTT+TGG | - | chr1.4:84335162-84335181 | MS.gene029415:intron | 20.0% |
| !!! | TTCTTTTTACTTTTTATCTG+AGG | - | chr1.4:84335846-84335865 | MS.gene029415:intron | 20.0% |
| !!! | TTTGTATTTTTTAGACCTAT+AGG | - | chr1.4:84332093-84332112 | MS.gene029415:intron | 20.0% |
| !!! | TTTTTGCTGTTATGTTATAT+AGG | - | chr1.4:84332335-84332354 | MS.gene029415:CDS | 20.0% |
| ! | ACAAAAAAACGACTCATTAA+AGG | - | chr1.4:84335470-84335489 | MS.gene029415:intron | 25.0% |
| ! | ACTTTCTTGTTGAAATTATC+AGG | - | chr1.4:84333478-84333497 | MS.gene029415:intron | 25.0% |
| ! | AGAATCCTTCAAATAAGAAA+AGG | + | chr1.4:84330916-84330935 | None:intergenic | 25.0% |
| ! | AGACAAAGCATAAAACAAAA+AGG | - | chr1.4:84336079-84336098 | MS.gene029415:CDS | 25.0% |
| ! | ATCTCATTAGTAATGAGTAA+AGG | - | chr1.4:84333953-84333972 | MS.gene029415:CDS | 25.0% |
| ! | CGAATAAAACAAATCTATCA+AGG | + | chr1.4:84333996-84334015 | None:intergenic | 25.0% |
| ! | CTAAAAGATTTATAGCCTAT+AGG | + | chr1.4:84332111-84332130 | None:intergenic | 25.0% |
| ! | TAAAGTTATAACCACTTCTA+TGG | - | chr1.4:84332632-84332651 | MS.gene029415:CDS | 25.0% |
| ! | TACCAATAATGAACACAAAA+TGG | + | chr1.4:84332033-84332052 | None:intergenic | 25.0% |
| ! | TACTCATTACTAATGAGATA+CGG | + | chr1.4:84333952-84333971 | None:intergenic | 25.0% |
| ! | TAGCCCAATAAATATATAGA+AGG | + | chr1.4:84331380-84331399 | None:intergenic | 25.0% |
| ! | TATAAGCAAATAAGCTGAAA+AGG | + | chr1.4:84330953-84330972 | None:intergenic | 25.0% |
| ! | TCACTTTCATCAACTATATT+TGG | - | chr1.4:84332361-84332380 | MS.gene029415:CDS | 25.0% |
| ! | TGCACTTAATACAAAAACTA+AGG | - | chr1.4:84333781-84333800 | MS.gene029415:intron | 25.0% |
| !! | AAGGAAAAAAGTTTTTATGC+AGG | + | chr1.4:84335080-84335099 | None:intergenic | 25.0% |
| !! | ACGAATATGTTTAAGTTTCA+CGG | + | chr1.4:84333660-84333679 | None:intergenic | 25.0% |
| !! | CTATAGGCTATAAATCTTTT+AGG | - | chr1.4:84332109-84332128 | MS.gene029415:intron | 25.0% |
| !! | GTGAATTTAAAATTCAAACC+TGG | + | chr1.4:84335499-84335518 | None:intergenic | 25.0% |
| !! | TTCCATTTTGTGTTCATTAT+TGG | - | chr1.4:84332028-84332047 | MS.gene029415:CDS | 25.0% |
| !! | TTCTTAATTTTGTTCGAGTA+CGG | + | chr1.4:84333306-84333325 | None:intergenic | 25.0% |
| !! | TTTAAAGTAAAGTGACATTG+AGG | + | chr1.4:84335332-84335351 | None:intergenic | 25.0% |
| !!! | AATCTTTTAGGTTAAGGTTA+TGG | - | chr1.4:84332121-84332140 | MS.gene029415:intron | 25.0% |
| !!! | ACTTTCCTTTTCTTATTTGA+AGG | - | chr1.4:84330908-84330927 | MS.gene029415:CDS | 25.0% |
| !!! | AGAATTTTTTTCCCATATCT+AGG | + | chr1.4:84331665-84331684 | None:intergenic | 25.0% |
| !!! | AGATTTTCTCTTTACTTTTG+AGG | - | chr1.4:84334940-84334959 | MS.gene029415:intron | 25.0% |
| !!! | CATTAGTACTTTAAAGTTTG+TGG | - | chr1.4:84333139-84333158 | MS.gene029415:CDS | 25.0% |
| !!! | CTTTTTCGGATGAAAAAAAA+AGG | + | chr1.4:84331811-84331830 | None:intergenic | 25.0% |
| !!! | CTTTTTTTTTCATCCGAAAA+AGG | - | chr1.4:84331809-84331828 | MS.gene029415:intron | 25.0% |
| !!! | GCTATAAATCTTTTAGGTTA+AGG | - | chr1.4:84332115-84332134 | MS.gene029415:intron | 25.0% |
| !!! | TTAAATGTCTGAGCTATTTT+CGG | - | chr1.4:84330981-84331000 | MS.gene029415:CDS | 25.0% |
| !!! | TTCATTTTGGTCTATATATC+TGG | - | chr1.4:84335175-84335194 | MS.gene029415:intron | 25.0% |
| !!! | TTGTTTTATTCGTGTTTGAT+TGG | - | chr1.4:84334004-84334023 | MS.gene029415:CDS | 25.0% |
| AAAATTTCCAGTGTTCTTGT+TGG | - | chr1.4:84335589-84335608 | MS.gene029415:intron | 30.0% | |
| AAATACACATCTCACATCAA+TGG | + | chr1.4:84331608-84331627 | None:intergenic | 30.0% | |
| AATAGAAAATCTTCAGCACA+AGG | - | chr1.4:84330823-84330842 | MS.gene029415:CDS | 30.0% | |
| AATCTCTTGTAAGCTATAGA+TGG | - | chr1.4:84332197-84332216 | MS.gene029415:CDS | 30.0% | |
| ACTGTACTTAATGAAATGGA+TGG | - | chr1.4:84332819-84332838 | MS.gene029415:intron | 30.0% | |
| AGATACTGGTACAAAAGAAT+GGG | + | chr1.4:84334340-84334359 | None:intergenic | 30.0% | |
| AGATGAATGATGATCAACAT+CGG | + | chr1.4:84336043-84336062 | None:intergenic | 30.0% | |
| ATTAAATCTGTAGTGAATGG+TGG | + | chr1.4:84332058-84332077 | None:intergenic | 30.0% | |
| ATTTAGTAATGCACGCAAAT+AGG | + | chr1.4:84332451-84332470 | None:intergenic | 30.0% | |
| CACAACGAAATGTAAATTCA+AGG | - | chr1.4:84331897-84331916 | MS.gene029415:intron | 30.0% | |
| CAGTCATTTGATTCAAAATG+TGG | + | chr1.4:84332971-84332990 | None:intergenic | 30.0% | |
| GAAATGGCAATTCAAAACAT+AGG | + | chr1.4:84333630-84333649 | None:intergenic | 30.0% | |
| GATAGATCAATTGTTAGGAT+TGG | + | chr1.4:84333907-84333926 | None:intergenic | 30.0% | |
| GGCTACTCCAAAAATTATTT+GGG | + | chr1.4:84334241-84334260 | None:intergenic | 30.0% | |
| GTACCTTGATATATTTCCTT+AGG | + | chr1.4:84333067-84333086 | None:intergenic | 30.0% | |
| GTATGTGTGAAATTTGAACT+AGG | - | chr1.4:84331334-84331353 | MS.gene029415:intron | 30.0% | |
| GTGTCTTCTCAAAATCTAAT+AGG | + | chr1.4:84332151-84332170 | None:intergenic | 30.0% | |
| GTTGACTGTACTTAATGAAA+TGG | - | chr1.4:84332815-84332834 | MS.gene029415:intron | 30.0% | |
| TAGATACTGGTACAAAAGAA+TGG | + | chr1.4:84334341-84334360 | None:intergenic | 30.0% | |
| TCAAGGTACAAATAGTTCAT+TGG | - | chr1.4:84333078-84333097 | MS.gene029415:intron | 30.0% | |
| TGCATAGATGATTGCTTTAA+AGG | - | chr1.4:84333593-84333612 | MS.gene029415:intron | 30.0% | |
| TGGAAGAAAAGAGATCATAA+TGG | - | chr1.4:84332878-84332897 | MS.gene029415:intron | 30.0% | |
| TTAAATCTGTAGTGAATGGT+GGG | + | chr1.4:84332057-84332076 | None:intergenic | 30.0% | |
| TTCAAGCAATGTTTATCTCT+AGG | - | chr1.4:84331183-84331202 | MS.gene029415:CDS | 30.0% | |
| ! | ACCAGAAGTATATACTTACA+AGG | + | chr1.4:84333371-84333390 | None:intergenic | 30.0% |
| ! | ATTTGATGACCACAAAACAA+TGG | - | chr1.4:84332901-84332920 | MS.gene029415:intron | 30.0% |
| ! | CCAGAAGTATATACTTACAA+GGG | + | chr1.4:84333370-84333389 | None:intergenic | 30.0% |
| ! | GTTTTGTATTAGGAAGATGT+GGG | - | chr1.4:84331741-84331760 | MS.gene029415:intron | 30.0% |
| ! | TGATAATGATGTATGCATGT+TGG | + | chr1.4:84335546-84335565 | None:intergenic | 30.0% |
| ! | TGTCTTTTATTCCAATTGTG+AGG | - | chr1.4:84334649-84334668 | MS.gene029415:intron | 30.0% |
| ! | TGTTTTGTATTAGGAAGATG+TGG | - | chr1.4:84331740-84331759 | MS.gene029415:intron | 30.0% |
| ! | TTAACAAACTTTTCCATTGC+AGG | - | chr1.4:84331419-84331438 | MS.gene029415:CDS | 30.0% |
| ! | TTCGTCTGAATGTTTTCTTT+AGG | - | chr1.4:84334101-84334120 | MS.gene029415:CDS | 30.0% |
| ! | TTCTGGTAATGTGAATGAAA+AGG | - | chr1.4:84333384-84333403 | MS.gene029415:CDS | 30.0% |
| ! | TTTTGTAGTGAACAATGATG+AGG | + | chr1.4:84333107-84333126 | None:intergenic | 30.0% |
| !! | ACAGTCAACTTGATTTTGAT+AGG | - | chr1.4:84335383-84335402 | MS.gene029415:intron | 30.0% |
| !! | AGTATTGATTGTTTCCTTGT+TGG | - | chr1.4:84334973-84334992 | MS.gene029415:intron | 30.0% |
| !! | TAGATTTTGAGAAGACACTT+GGG | - | chr1.4:84332153-84332172 | MS.gene029415:intron | 30.0% |
| !! | TTAGATTTTGAGAAGACACT+TGG | - | chr1.4:84332152-84332171 | MS.gene029415:intron | 30.0% |
| !! | TTGTTTTATGCTTTGTCTTG+CGG | + | chr1.4:84336077-84336096 | None:intergenic | 30.0% |
| !!! | TTTTTTTCCCATATCTAGGA+TGG | + | chr1.4:84331661-84331680 | None:intergenic | 30.0% |
| AAAAGGAAAGTTGCATACAC+AGG | + | chr1.4:84330899-84330918 | None:intergenic | 35.0% | |
| AAAGGTTTCGAAGAGAAATG+AGG | - | chr1.4:84334703-84334722 | MS.gene029415:intron | 35.0% | |
| AAATGCTAACATGTGCTCTA+AGG | - | chr1.4:84331921-84331940 | MS.gene029415:intron | 35.0% | |
| AAGTGCATCCCTTAAAATCA+TGG | + | chr1.4:84333768-84333787 | None:intergenic | 35.0% | |
| AATGCTAACATGTGCTCTAA+GGG | - | chr1.4:84331922-84331941 | MS.gene029415:intron | 35.0% | |
| ACAAAACAATGGAGGACTTA+TGG | - | chr1.4:84332912-84332931 | MS.gene029415:intron | 35.0% | |
| ACAAGTAAAGGTTTCAGTGA+AGG | - | chr1.4:84331278-84331297 | MS.gene029415:CDS | 35.0% | |
| AGAAAATGGGAGCTTAAATG+CGG | - | chr1.4:84332680-84332699 | MS.gene029415:CDS | 35.0% | |
| AGACATATTGCATGTCCATA+GGG | - | chr1.4:84331240-84331259 | MS.gene029415:CDS | 35.0% | |
| AGCTTGGAAGAATTGAAACA+TGG | + | chr1.4:84335049-84335068 | None:intergenic | 35.0% | |
| ATATATTTCCTTAGGAGCGA+AGG | + | chr1.4:84333059-84333078 | None:intergenic | 35.0% | |
| ATGAATAGACACGAAACAAC+AGG | + | chr1.4:84333542-84333561 | None:intergenic | 35.0% | |
| ATTGTTTCCTTGTTGGATGT+TGG | - | chr1.4:84334980-84334999 | MS.gene029415:intron | 35.0% | |
| CAAATCTATCAAGGAATGTC+TGG | + | chr1.4:84333987-84334006 | None:intergenic | 35.0% | |
| CAACTGTCGAATGAAAATGA+AGG | + | chr1.4:84333744-84333763 | None:intergenic | 35.0% | |
| CAGATTGTGAACTATAAGCA+CGG | + | chr1.4:84334191-84334210 | None:intergenic | 35.0% | |
| CCAAAAATTATTTGGGTCAG+TGG | + | chr1.4:84334234-84334253 | None:intergenic | 35.0% | |
| CCCTTGTAAGTATATACTTC+TGG | - | chr1.4:84333367-84333386 | MS.gene029415:CDS | 35.0% | |
| GATTGAAGCAAAGCAACATA+AGG | - | chr1.4:84330796-84330815 | MS.gene029415:CDS | 35.0% | |
| GCAAATTGACCAAAGTTGAA+AGG | - | chr1.4:84334685-84334704 | MS.gene029415:intron | 35.0% | |
| GCTCCTAAGGAAATATATCA+AGG | - | chr1.4:84333061-84333080 | MS.gene029415:intron | 35.0% | |
| GGGCTACTCCAAAAATTATT+TGG | + | chr1.4:84334242-84334261 | None:intergenic | 35.0% | |
| GTCAGGATAGATCAATTGTT+AGG | + | chr1.4:84333912-84333931 | None:intergenic | 35.0% | |
| TAAAAATCTTCGTCCTGCAA+TGG | + | chr1.4:84331435-84331454 | None:intergenic | 35.0% | |
| TAAATTCACCTCCATTCTCA+TGG | - | chr1.4:84335510-84335529 | MS.gene029415:intron | 35.0% | |
| TAGACATATTGCATGTCCAT+AGG | - | chr1.4:84331239-84331258 | MS.gene029415:CDS | 35.0% | |
| TATGCAAGGATACCTCTAAA+AGG | + | chr1.4:84334510-84334529 | None:intergenic | 35.0% | |
| TCATTAACTCTCTTGAGCTT+TGG | - | chr1.4:84334154-84334173 | MS.gene029415:CDS | 35.0% | |
| TCTAACAGCAAAATGTTACG+AGG | + | chr1.4:84333861-84333880 | None:intergenic | 35.0% | |
| TCTAATGCCATCCTAGATAT+GGG | - | chr1.4:84331651-84331670 | MS.gene029415:intron | 35.0% | |
| TCTTCGAAACCTTTCAACTT+TGG | + | chr1.4:84334697-84334716 | None:intergenic | 35.0% | |
| TGAATATGTCTTCCAATGCT+TGG | - | chr1.4:84333170-84333189 | MS.gene029415:CDS | 35.0% | |
| TGATTTACGCAGCATATTGA+AGG | - | chr1.4:84334431-84334450 | MS.gene029415:intron | 35.0% | |
| TGTAGGAAATCTCAAGAGAT+TGG | - | chr1.4:84332400-84332419 | MS.gene029415:intron | 35.0% | |
| TGTGTGAAATTTGAACTAGG+TGG | - | chr1.4:84331337-84331356 | MS.gene029415:intron | 35.0% | |
| TTCTAATGCCATCCTAGATA+TGG | - | chr1.4:84331650-84331669 | MS.gene029415:intron | 35.0% | |
| TTCTTCATCACCAAAAACAG+AGG | + | chr1.4:84335623-84335642 | None:intergenic | 35.0% | |
| TTTATTGGGCTACATTCTGT+TGG | - | chr1.4:84331388-84331407 | MS.gene029415:intron | 35.0% | |
| ! | AAATCCACCTAACCTTTTAG+AGG | - | chr1.4:84334495-84334514 | MS.gene029415:intron | 35.0% |
| ! | AAGGATACCTCTAAAAGGTT+AGG | + | chr1.4:84334505-84334524 | None:intergenic | 35.0% |
| ! | AATTTTCCACACTCAGATTG+AGG | - | chr1.4:84334829-84334848 | MS.gene029415:intron | 35.0% |
| ! | ACAGTTGGCCATGATTTTAA+GGG | - | chr1.4:84333757-84333776 | MS.gene029415:intron | 35.0% |
| ! | CCACTGACCCAAATAATTTT+TGG | - | chr1.4:84334231-84334250 | MS.gene029415:CDS | 35.0% |
| ! | CTTCATTTTCATTCGACAGT+TGG | - | chr1.4:84333742-84333761 | MS.gene029415:intron | 35.0% |
| ! | CTTTTCGCAAGGTTTATGAA+TGG | - | chr1.4:84334127-84334146 | MS.gene029415:CDS | 35.0% |
| ! | GTGCAGTGATCATAATTTGT+AGG | - | chr1.4:84332383-84332402 | MS.gene029415:intron | 35.0% |
| ! | TTCTTTTATCCAGGAAGATG+TGG | - | chr1.4:84332524-84332543 | MS.gene029415:CDS | 35.0% |
| ! | TTGTGTGTTTGCTGGTAAAT+TGG | - | chr1.4:84332277-84332296 | MS.gene029415:CDS | 35.0% |
| !! | AAGAACATTTGTGACTTGCT+AGG | - | chr1.4:84333417-84333436 | MS.gene029415:intron | 35.0% |
| !! | AGATTTTGAGAAGACACTTG+GGG | - | chr1.4:84332154-84332173 | MS.gene029415:intron | 35.0% |
| !! | ATAAGTCCTCCATTGTTTTG+TGG | + | chr1.4:84332913-84332932 | None:intergenic | 35.0% |
| !! | ATACTTTGATAGTGCACTAG+AGG | + | chr1.4:84335424-84335443 | None:intergenic | 35.0% |
| !! | TAGAGGTATCCTTGCATATT+AGG | - | chr1.4:84334512-84334531 | MS.gene029415:intron | 35.0% |
| !! | TATTGAAGGTACTCGTTACT+TGG | - | chr1.4:84334445-84334464 | MS.gene029415:intron | 35.0% |
| !!! | CGTAACATTTTGCTGTTAGA+GGG | - | chr1.4:84333861-84333880 | MS.gene029415:CDS | 35.0% |
| !!! | CGTTTTTTTGTTTTGCTCTC+TGG | + | chr1.4:84335461-84335480 | None:intergenic | 35.0% |
| !!! | TCGTAACATTTTGCTGTTAG+AGG | - | chr1.4:84333860-84333879 | MS.gene029415:CDS | 35.0% |
| !!! | TGCTTTTTCCTCTTTCCTTT+TGG | + | chr1.4:84335910-84335929 | None:intergenic | 35.0% |
| !!! | TTTGTCTTGCGGTTTTGTTT+TGG | + | chr1.4:84336066-84336085 | None:intergenic | 35.0% |
| !!! | TTTTTTGTTTTGCTCTCTGG+CGG | + | chr1.4:84335458-84335477 | None:intergenic | 35.0% |
| AACTGCGTCATTGAACTTCT+CGG | - | chr1.4:84333689-84333708 | MS.gene029415:intron | 40.0% | |
| AAGTGTCAAGCTCATAAGTC+AGG | + | chr1.4:84333929-84333948 | None:intergenic | 40.0% | |
| AATTACTGCACAAGACCGAA+TGG | + | chr1.4:84333207-84333226 | None:intergenic | 40.0% | |
| AATTGGTTGAAGAGGAATGC+CGG | - | chr1.4:84332294-84332313 | MS.gene029415:CDS | 40.0% | |
| ACAGTAATCCATGAGAATGG+AGG | + | chr1.4:84335521-84335540 | None:intergenic | 40.0% | |
| ACATTGAGGCGTGAAATAAG+TGG | + | chr1.4:84335318-84335337 | None:intergenic | 40.0% | |
| ACGACTCATTAAAGGAATCC+AGG | - | chr1.4:84335478-84335497 | MS.gene029415:intron | 40.0% | |
| ACGTAGACGAAGACAAGTAA+AGG | - | chr1.4:84331266-84331285 | MS.gene029415:CDS | 40.0% | |
| AGAGAGTTGTGCATCTGTAT+TGG | - | chr1.4:84333563-84333582 | MS.gene029415:intron | 40.0% | |
| AGGAGCAATCTTGACAATAC+CGG | + | chr1.4:84332316-84332335 | None:intergenic | 40.0% | |
| AGTAAGCTGCTTATCCAAAC+AGG | - | chr1.4:84331121-84331140 | MS.gene029415:intron | 40.0% | |
| ATAGACACGAAACAACAGGA+AGG | + | chr1.4:84333538-84333557 | None:intergenic | 40.0% | |
| ATCAGGTGTCTCTTCATTTC+TGG | - | chr1.4:84333495-84333514 | MS.gene029415:intron | 40.0% | |
| CAAGGTAGGACTTCACAATA+TGG | + | chr1.4:84332938-84332957 | None:intergenic | 40.0% | |
| CATATTGTGAAGTCCTACCT+TGG | - | chr1.4:84332936-84332955 | MS.gene029415:intron | 40.0% | |
| CATTGAGGCGTGAAATAAGT+GGG | + | chr1.4:84335317-84335336 | None:intergenic | 40.0% | |
| CATTGCAGTGGCTAAATGAT+GGG | - | chr1.4:84331833-84331852 | MS.gene029415:intron | 40.0% | |
| CCACAAATCAACCATAGAAG+TGG | + | chr1.4:84332646-84332665 | None:intergenic | 40.0% | |
| CTACTGAACCAAAAGGAAAG+AGG | - | chr1.4:84335899-84335918 | MS.gene029415:intron | 40.0% | |
| CTCCACAACATCATCATCAA+TGG | + | chr1.4:84335950-84335969 | None:intergenic | 40.0% | |
| CTTAGCTACTAAGCTTGCAT+TGG | - | chr1.4:84331683-84331702 | MS.gene029415:intron | 40.0% | |
| CTTTCTACCTAATGATCCTG+CGG | - | chr1.4:84334892-84334911 | MS.gene029415:intron | 40.0% | |
| GAACTAGGTGGTGATTGATA+GGG | - | chr1.4:84331349-84331368 | MS.gene029415:intron | 40.0% | |
| GAAGAATTGAAACATGGAGC+AGG | + | chr1.4:84335043-84335062 | None:intergenic | 40.0% | |
| GACACAGTAATCCATGAGAA+TGG | + | chr1.4:84335524-84335543 | None:intergenic | 40.0% | |
| GCCACAAACATGTCTCTAAA+GGG | + | chr1.4:84331873-84331892 | None:intergenic | 40.0% | |
| GCTAAACACTATCGTATGGT+GGG | - | chr1.4:84335197-84335216 | MS.gene029415:intron | 40.0% | |
| GGAGGATACTAAAGAGAATG+AGG | - | chr1.4:84335657-84335676 | MS.gene029415:intron | 40.0% | |
| GTAAGCTGCTTATCCAAACA+GGG | - | chr1.4:84331122-84331141 | MS.gene029415:intron | 40.0% | |
| GTACTTGAAAGAGAATGACC+CGG | - | chr1.4:84331458-84331477 | MS.gene029415:CDS | 40.0% | |
| GTTTCACGGCATTTACGAAA+TGG | + | chr1.4:84333646-84333665 | None:intergenic | 40.0% | |
| TAGACACGAAACAACAGGAA+GGG | + | chr1.4:84333537-84333556 | None:intergenic | 40.0% | |
| TCACTGAACTTAAGCAGATC+CGG | + | chr1.4:84331480-84331499 | None:intergenic | 40.0% | |
| TCAGGTGTCTCTTCATTTCT+GGG | - | chr1.4:84333496-84333515 | MS.gene029415:intron | 40.0% | |
| TCATCTCCAGCATATCCAAA+AGG | + | chr1.4:84334368-84334387 | None:intergenic | 40.0% | |
| TCATTGCAGTGGCTAAATGA+TGG | - | chr1.4:84331832-84331851 | MS.gene029415:intron | 40.0% | |
| TCTCATCATCATCACCATAG+TGG | + | chr1.4:84332740-84332759 | None:intergenic | 40.0% | |
| TCTGGCTAAACACTATCGTA+TGG | - | chr1.4:84335193-84335212 | MS.gene029415:intron | 40.0% | |
| TGAACTAGGTGGTGATTGAT+AGG | - | chr1.4:84331348-84331367 | MS.gene029415:intron | 40.0% | |
| TGAAGAATCAGCAAGTGATG+AGG | - | chr1.4:84335636-84335655 | MS.gene029415:intron | 40.0% | |
| TGATGACCACAAAACAATGG+AGG | - | chr1.4:84332904-84332923 | MS.gene029415:intron | 40.0% | |
| TGCCACAAACATGTCTCTAA+AGG | + | chr1.4:84331874-84331893 | None:intergenic | 40.0% | |
| TGCTGGTAAATTGGTTGAAG+AGG | - | chr1.4:84332286-84332305 | MS.gene029415:CDS | 40.0% | |
| TTAGCTATTAAGGCCCTGTT+TGG | + | chr1.4:84331138-84331157 | None:intergenic | 40.0% | |
| TTCTGTGGTTGAAGAACTTG+CGG | - | chr1.4:84334584-84334603 | MS.gene029415:intron | 40.0% | |
| TTCTTCTCCAACAAGAACAC+TGG | + | chr1.4:84335599-84335618 | None:intergenic | 40.0% | |
| TTGTGCATCTGTATTGGATC+TGG | - | chr1.4:84333569-84333588 | MS.gene029415:intron | 40.0% | |
| ! | ACCAGTATCTATGCTCCTTT+TGG | - | chr1.4:84334350-84334369 | MS.gene029415:CDS | 40.0% |
| ! | ATCAACATCGGCATTTTTCC+CGG | + | chr1.4:84336031-84336050 | None:intergenic | 40.0% |
| ! | CTGTTTCGCTTCTTTTATCC+AGG | - | chr1.4:84332515-84332534 | MS.gene029415:CDS | 40.0% |
| ! | GACAGTTGGCCATGATTTTA+AGG | - | chr1.4:84333756-84333775 | MS.gene029415:intron | 40.0% |
| ! | GAGCAATACTTGTCATTTCC+AGG | + | chr1.4:84335733-84335752 | None:intergenic | 40.0% |
| ! | GATACCTCTAAAAGGTTAGG+TGG | + | chr1.4:84334502-84334521 | None:intergenic | 40.0% |
| ! | GCTTGCTAACCTAATATGCA+AGG | + | chr1.4:84334524-84334543 | None:intergenic | 40.0% |
| ! | GGAGAAGAATCCTCTGTTTT+TGG | - | chr1.4:84335610-84335629 | MS.gene029415:intron | 40.0% |
| ! | TATGCTCCTTTTGGATATGC+TGG | - | chr1.4:84334359-84334378 | MS.gene029415:CDS | 40.0% |
| ! | TCCAAAAGGAGCATAGATAC+TGG | + | chr1.4:84334354-84334373 | None:intergenic | 40.0% |
| ! | TCCCTTTAGAGACATGTTTG+TGG | - | chr1.4:84331869-84331888 | MS.gene029415:intron | 40.0% |
| ! | TGCGCTTTTCATTCACAAAC+TGG | + | chr1.4:84334862-84334881 | None:intergenic | 40.0% |
| ! | TTGGCATGCATCAGATTTTG+TGG | - | chr1.4:84334788-84334807 | MS.gene029415:intron | 40.0% |
| !! | AAATGTGGAGAGCATTTCCA+AGG | + | chr1.4:84332956-84332975 | None:intergenic | 40.0% |
| !! | CAATTGTTAGGATTGGTTCC+AGG | + | chr1.4:84333900-84333919 | None:intergenic | 40.0% |
| !! | CATTGATGATGATGTTGTGG+AGG | - | chr1.4:84335948-84335967 | MS.gene029415:intron | 40.0% |
| !! | CCACTTCTATGGTTGATTTG+TGG | - | chr1.4:84332643-84332662 | MS.gene029415:CDS | 40.0% |
| !! | TCTTTAGGAAGCTTTTCGCA+AGG | - | chr1.4:84334116-84334135 | MS.gene029415:CDS | 40.0% |
| !! | TGCCATTGATGATGATGTTG+TGG | - | chr1.4:84335945-84335964 | MS.gene029415:intron | 40.0% |
| !!! | AGAGGCTTGTGTTTTTTCTG+TGG | - | chr1.4:84334569-84334588 | MS.gene029415:intron | 40.0% |
| !!! | CTCTTTCCTTTTGGTTCAGT+AGG | + | chr1.4:84335901-84335920 | None:intergenic | 40.0% |
| AAGTTGCGCAACCTCACAAT+TGG | + | chr1.4:84334663-84334682 | None:intergenic | 45.0% | |
| AATGCCCGTGTCTTAAGAGT+TGG | + | chr1.4:84334546-84334565 | None:intergenic | 45.0% | |
| AATGGGTAGAAGCAGCAATC+TGG | + | chr1.4:84334323-84334342 | None:intergenic | 45.0% | |
| AGAACCACAGGTAGATGAGA+AGG | - | chr1.4:84332566-84332585 | MS.gene029415:CDS | 45.0% | |
| AGAATCAGCAAGTGATGAGG+AGG | - | chr1.4:84335639-84335658 | MS.gene029415:intron | 45.0% | |
| AGCATCGTCAGTCACTTCAT+TGG | + | chr1.4:84335145-84335164 | None:intergenic | 45.0% | |
| AGGTCAACCAACATCCAACA+AGG | + | chr1.4:84334990-84335009 | None:intergenic | 45.0% | |
| AGTTCCATCCACGTTCTCTT+TGG | + | chr1.4:84335686-84335705 | None:intergenic | 45.0% | |
| ATAGCCTTCTCATCTACCTG+TGG | + | chr1.4:84332573-84332592 | None:intergenic | 45.0% | |
| CAACAGCCTACTGAACCAAA+AGG | - | chr1.4:84335892-84335911 | MS.gene029415:intron | 45.0% | |
| CAAGCCAACTCTTAAGACAC+GGG | - | chr1.4:84334539-84334558 | MS.gene029415:intron | 45.0% | |
| CACTGAACTTAAGCAGATCC+GGG | + | chr1.4:84331479-84331498 | None:intergenic | 45.0% | |
| CACTGTGGAGTTACTCTGTT+GGG | - | chr1.4:84334616-84334635 | MS.gene029415:intron | 45.0% | |
| CAGGTGTCTCTTCATTTCTG+GGG | - | chr1.4:84333497-84333516 | MS.gene029415:intron | 45.0% | |
| CGCAGGATCATTAGGTAGAA+AGG | + | chr1.4:84334894-84334913 | None:intergenic | 45.0% | |
| CGGATACATCTCAACCTAAG+CGG | + | chr1.4:84334291-84334310 | None:intergenic | 45.0% | |
| CTGAGGAATGCATTGCTTTC+AGG | - | chr1.4:84335863-84335882 | MS.gene029415:intron | 45.0% | |
| GAGGGATACAATCAATCACC+TGG | - | chr1.4:84333879-84333898 | MS.gene029415:CDS | 45.0% | |
| GAGTTACTCTGTTGGGTTCA+TGG | - | chr1.4:84334623-84334642 | MS.gene029415:intron | 45.0% | |
| GCAAGCCAACTCTTAAGACA+CGG | - | chr1.4:84334538-84334557 | MS.gene029415:intron | 45.0% | |
| GGAAGATGTGGATGATGACA+TGG | - | chr1.4:84332536-84332555 | MS.gene029415:CDS | 45.0% | |
| GGCTAAACACTATCGTATGG+TGG | - | chr1.4:84335196-84335215 | MS.gene029415:intron | 45.0% | |
| GTGGATGATGACATGGAAGA+TGG | - | chr1.4:84332543-84332562 | MS.gene029415:CDS | 45.0% | |
| GTGTGTTTGTGTATGCAGCT+GGG | + | chr1.4:84335785-84335804 | None:intergenic | 45.0% | |
| TAAGACACGGGCATTTCAAG+AGG | - | chr1.4:84334551-84334570 | MS.gene029415:intron | 45.0% | |
| TCAAGAAAAGATGATGCCGC+AGG | + | chr1.4:84334911-84334930 | None:intergenic | 45.0% | |
| TCCGAAAAAGGTCATTGCAG+TGG | - | chr1.4:84331821-84331840 | MS.gene029415:intron | 45.0% | |
| TGAGAAGGCTATTGAGCATG+AGG | - | chr1.4:84332581-84332600 | MS.gene029415:CDS | 45.0% | |
| TGAGCATGAGGTTCAAGCAA+AGG | - | chr1.4:84332593-84332612 | MS.gene029415:CDS | 45.0% | |
| TGTCATCATCCACATCTTCC+TGG | + | chr1.4:84332536-84332555 | None:intergenic | 45.0% | |
| TGTCCTAAAAGCCCTCATCA+GGG | + | chr1.4:84332712-84332731 | None:intergenic | 45.0% | |
| TTGTTGAAGCTTCCTGCTTC+TGG | - | chr1.4:84332855-84332874 | MS.gene029415:intron | 45.0% | |
| ! | AAGGCGTGTTGATATGCAGT+CGG | + | chr1.4:84333725-84333744 | None:intergenic | 45.0% |
| ! | CAGCAATCTGGTTCAACATC+CGG | + | chr1.4:84334311-84334330 | None:intergenic | 45.0% |
| ! | CATTAGCCTCAATCTGAGTG+TGG | + | chr1.4:84334838-84334857 | None:intergenic | 45.0% |
| ! | CTTCCAATGCTTGGTGATTG+TGG | - | chr1.4:84333179-84333198 | MS.gene029415:CDS | 45.0% |
| ! | CTTGTCATTTCCAGGTAACC+AGG | + | chr1.4:84335725-84335744 | None:intergenic | 45.0% |
| ! | GCCACTGCAATGACCTTTTT+CGG | + | chr1.4:84331825-84331844 | None:intergenic | 45.0% |
| ! | TCTTTTCTTCCACCAGAAGC+AGG | + | chr1.4:84332870-84332889 | None:intergenic | 45.0% |
| ! | TGATGATGTTGTGGAGGACT+TGG | - | chr1.4:84335954-84335973 | MS.gene029415:intron | 45.0% |
| ! | TGCGGCATCATCTTTTCTTG+AGG | - | chr1.4:84334910-84334929 | MS.gene029415:intron | 45.0% |
| ! | TTGGTGATTGTGGCACCATT+CGG | - | chr1.4:84333189-84333208 | MS.gene029415:CDS | 45.0% |
| ! | TTTAGCTCATCCTGGTTACC+TGG | - | chr1.4:84335712-84335731 | MS.gene029415:intron | 45.0% |
| ! | TTTAGGACAGCATGCCACTA+TGG | - | chr1.4:84332723-84332742 | MS.gene029415:CDS | 45.0% |
| !! | CGCTTAGGTTGAGATGTATC+CGG | - | chr1.4:84334289-84334308 | MS.gene029415:CDS | 45.0% |
| !! | TCTCTTCATTTCTGGGGTAC+TGG | - | chr1.4:84333503-84333522 | MS.gene029415:intron | 45.0% |
| AATGAGGCAGCTTATTCGCG+AGG | - | chr1.4:84334719-84334738 | MS.gene029415:intron | 50.0% | |
| ACCTAGCTGTGGGAACTAGA+CGG | + | chr1.4:84334263-84334282 | None:intergenic | 50.0% | |
| CAGAGTAACTCCACAGTGCT+AGG | + | chr1.4:84334614-84334633 | None:intergenic | 50.0% | |
| CAGCTAGGTACTTTCCGCTT+AGG | - | chr1.4:84334274-84334293 | MS.gene029415:CDS | 50.0% | |
| CATGGAAGATGGAGAACCAC+AGG | - | chr1.4:84332554-84332573 | MS.gene029415:CDS | 50.0% | |
| CGTCATTGAACTTCTCGGAG+TGG | - | chr1.4:84333694-84333713 | MS.gene029415:intron | 50.0% | |
| CGTGTGTTTGTGTATGCAGC+TGG | + | chr1.4:84335786-84335805 | None:intergenic | 50.0% | |
| CTGTCCTAAAAGCCCTCATC+AGG | + | chr1.4:84332713-84332732 | None:intergenic | 50.0% | |
| CTTCGTCTACGTCTACCCTA+TGG | + | chr1.4:84331258-84331277 | None:intergenic | 50.0% | |
| GACTGTGCTTGTGTGTTTGC+TGG | - | chr1.4:84332269-84332288 | MS.gene029415:CDS | 50.0% | |
| GAGTTGAATAGACCCCCTAC+AGG | - | chr1.4:84334390-84334409 | MS.gene029415:intron | 50.0% | |
| GATGATGCCGCAGGATCATT+AGG | + | chr1.4:84334902-84334921 | None:intergenic | 50.0% | |
| GATGCCAAAGAGAACGTGGA+TGG | - | chr1.4:84335679-84335698 | MS.gene029415:intron | 50.0% | |
| GCACTGTGGAGTTACTCTGT+TGG | - | chr1.4:84334615-84334634 | MS.gene029415:intron | 50.0% | |
| GTGCCACAATCACCAAGCAT+TGG | + | chr1.4:84333185-84333204 | None:intergenic | 50.0% | |
| TATGCAGGTAGCTGAGAGCT+TGG | + | chr1.4:84335065-84335084 | None:intergenic | 50.0% | |
| TGAGGATGCCAAAGAGAACG+TGG | - | chr1.4:84335675-84335694 | MS.gene029415:intron | 50.0% | |
| TTGAAGCTTCCTGCTTCTGG+TGG | - | chr1.4:84332858-84332877 | MS.gene029415:intron | 50.0% | |
| TTGAATAGACCCCCTACAGG+AGG | - | chr1.4:84334393-84334412 | MS.gene029415:intron | 50.0% | |
| ! | CTGCTGCATTTAGCTCATCC+TGG | - | chr1.4:84335704-84335723 | MS.gene029415:intron | 50.0% |
| ! | GTTCCCTGATGAGGGCTTTT+AGG | - | chr1.4:84332706-84332725 | MS.gene029415:CDS | 50.0% |
| !! | AAGCGGAAAGTACCTAGCTG+TGG | + | chr1.4:84334274-84334293 | None:intergenic | 50.0% |
| !! | AGCGGAAAGTACCTAGCTGT+GGG | + | chr1.4:84334273-84334292 | None:intergenic | 50.0% |
| !! | CTAAATGATGGGTGACTGGC+TGG | - | chr1.4:84331844-84331863 | MS.gene029415:intron | 50.0% |
| !! | CTGCTTTTCCTTCGCTCCTA+AGG | - | chr1.4:84333048-84333067 | MS.gene029415:intron | 50.0% |
| !! | CTTCATTTCTGGGGTACTGG+TGG | - | chr1.4:84333506-84333525 | MS.gene029415:intron | 50.0% |
| !! | GTGGAGAGCATTTCCAAGGT+AGG | + | chr1.4:84332952-84332971 | None:intergenic | 50.0% |
| !! | GTGGCTAAATGATGGGTGAC+TGG | - | chr1.4:84331840-84331859 | MS.gene029415:intron | 50.0% |
| ATGCGGTTCGTTCCCTGATG+AGG | - | chr1.4:84332697-84332716 | MS.gene029415:CDS | 55.0% | |
| CCTAGCTGTGGGAACTAGAC+GGG | + | chr1.4:84334262-84334281 | None:intergenic | 55.0% | |
| CTTTGCCAACGCCTCCTGTA+GGG | + | chr1.4:84334407-84334426 | None:intergenic | 55.0% | |
| TGCGGTTCGTTCCCTGATGA+GGG | - | chr1.4:84332698-84332717 | MS.gene029415:CDS | 55.0% | |
| TTGCGGAACACCTAGCACTG+TGG | - | chr1.4:84334601-84334620 | MS.gene029415:intron | 55.0% | |
| TTTGCCAACGCCTCCTGTAG+GGG | + | chr1.4:84334406-84334425 | None:intergenic | 55.0% | |
| ! | CGGCATTTTTCCCGGCAGAA+GGG | + | chr1.4:84336023-84336042 | None:intergenic | 55.0% |
| ! | TCGGCATTTTTCCCGGCAGA+AGG | + | chr1.4:84336024-84336043 | None:intergenic | 55.0% |
| !! | CATTTCTGGGGTACTGGTGG+AGG | - | chr1.4:84333509-84333528 | MS.gene029415:intron | 55.0% |
| GCTTTGCCAACGCCTCCTGT+AGG | + | chr1.4:84334408-84334427 | None:intergenic | 60.0% | |
| TCAAGCGACAGCCCTTCTGC+CGG | - | chr1.4:84336009-84336028 | MS.gene029415:intron | 60.0% | |
| TTGCCAACGCCTCCTGTAGG+GGG | + | chr1.4:84334405-84334424 | None:intergenic | 60.0% | |
| ! | CCCGTCTAGTTCCCACAGCT+AGG | - | chr1.4:84334259-84334278 | MS.gene029415:CDS | 60.0% |
| ! | GCAGAAGGGCTGTCGCTTGA+AGG | + | chr1.4:84336009-84336028 | None:intergenic | 60.0% |
| CAAGCGACAGCCCTTCTGCC+GGG | - | chr1.4:84336010-84336029 | MS.gene029415:intron | 65.0% | |
| ! | AGACCCCCTACAGGAGGCGT+TGG | - | chr1.4:84334399-84334418 | MS.gene029415:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 84330788 | 84336128 | 84330788 | ID=MS.gene029415 |
| chr1.4 | mRNA | 84330788 | 84336128 | 84330788 | ID=MS.gene029415.t1;Parent=MS.gene029415 |
| chr1.4 | exon | 84336072 | 84336128 | 84336072 | ID=MS.gene029415.t1.exon1;Parent=MS.gene029415.t1 |
| chr1.4 | CDS | 84336072 | 84336128 | 84336072 | ID=cds.MS.gene029415.t1;Parent=MS.gene029415.t1 |
| chr1.4 | exon | 84335404 | 84335475 | 84335404 | ID=MS.gene029415.t1.exon2;Parent=MS.gene029415.t1 |
| chr1.4 | CDS | 84335404 | 84335475 | 84335404 | ID=cds.MS.gene029415.t1;Parent=MS.gene029415.t1 |
| chr1.4 | exon | 84333834 | 84334379 | 84333834 | ID=MS.gene029415.t1.exon3;Parent=MS.gene029415.t1 |
| chr1.4 | CDS | 84333834 | 84334379 | 84333834 | ID=cds.MS.gene029415.t1;Parent=MS.gene029415.t1 |
| chr1.4 | exon | 84333114 | 84333416 | 84333114 | ID=MS.gene029415.t1.exon4;Parent=MS.gene029415.t1 |
| chr1.4 | CDS | 84333114 | 84333416 | 84333114 | ID=cds.MS.gene029415.t1;Parent=MS.gene029415.t1 |
| chr1.4 | exon | 84332464 | 84332793 | 84332464 | ID=MS.gene029415.t1.exon5;Parent=MS.gene029415.t1 |
| chr1.4 | CDS | 84332464 | 84332793 | 84332464 | ID=cds.MS.gene029415.t1;Parent=MS.gene029415.t1 |
| chr1.4 | exon | 84332176 | 84332382 | 84332176 | ID=MS.gene029415.t1.exon6;Parent=MS.gene029415.t1 |
| chr1.4 | CDS | 84332176 | 84332382 | 84332176 | ID=cds.MS.gene029415.t1;Parent=MS.gene029415.t1 |
| chr1.4 | exon | 84331985 | 84332071 | 84331985 | ID=MS.gene029415.t1.exon7;Parent=MS.gene029415.t1 |
| chr1.4 | CDS | 84331985 | 84332071 | 84331985 | ID=cds.MS.gene029415.t1;Parent=MS.gene029415.t1 |
| chr1.4 | exon | 84331417 | 84331511 | 84331417 | ID=MS.gene029415.t1.exon8;Parent=MS.gene029415.t1 |
| chr1.4 | CDS | 84331417 | 84331511 | 84331417 | ID=cds.MS.gene029415.t1;Parent=MS.gene029415.t1 |
| chr1.4 | exon | 84331173 | 84331316 | 84331173 | ID=MS.gene029415.t1.exon9;Parent=MS.gene029415.t1 |
| chr1.4 | CDS | 84331173 | 84331316 | 84331173 | ID=cds.MS.gene029415.t1;Parent=MS.gene029415.t1 |
| chr1.4 | exon | 84330788 | 84331031 | 84330788 | ID=MS.gene029415.t1.exon10;Parent=MS.gene029415.t1 |
| chr1.4 | CDS | 84330788 | 84331031 | 84330788 | ID=cds.MS.gene029415.t1;Parent=MS.gene029415.t1 |
| Gene Sequence |
| Protein sequence |
