AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068781

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068781.t1 MTR_2g079510 98.606 574 8 0 1 574 1 574 0.0 1177
MS.gene068781.t1 MTR_4g081850 88.078 562 49 3 1 552 1 554 0.0 991
MS.gene068781.t1 MTR_1g048030 34.596 396 226 7 197 566 125 513 3.43e-59 207
MS.gene068781.t1 MTR_4g050490 30.422 332 159 9 193 460 150 473 1.05e-33 135
MS.gene068781.t1 MTR_5g010400 72.222 72 20 0 7 78 14 85 3.56e-28 108
MS.gene068781.t1 MTR_7g094890 26.354 277 170 9 206 461 110 373 1.72e-15 79.0
MS.gene068781.t1 MTR_2g079540 69.388 49 13 1 7 53 15 63 6.84e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068781.t1 AT1G52980 73.498 566 139 4 4 561 3 565 0.0 820
MS.gene068781.t1 AT3G07050 32.552 384 231 5 182 538 105 487 1.60e-63 219
MS.gene068781.t1 AT2G27200 29.412 323 171 7 193 460 149 469 8.94e-37 144
MS.gene068781.t1 AT1G08410 28.235 340 180 8 193 473 149 483 7.56e-36 142
MS.gene068781.t1 AT4G02790 28.253 269 161 8 206 455 109 364 8.42e-18 85.9

Find 138 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACATTTGCAATAGCTTTAA+TGG 0.156377 2.3:-18156938 None:intergenic
GTTGGAGTGCTTTGGTTTAC+CGG 0.301059 2.3:-18152022 None:intergenic
CTGGTACATTTCTTTGCTGC+TGG 0.301939 2.3:-18156969 None:intergenic
GGTCCAAATGCATCAGAAAA+AGG 0.325775 2.3:-18152568 None:intergenic
TCGGGTGGATGGAAGCTCTT+TGG 0.328019 2.3:-18152172 None:intergenic
TAATTACAATATTATTCTTA+AGG 0.328853 2.3:+18152385 MS.gene068781:CDS
GAAACTTATGATTCACTTGT+TGG 0.329814 2.3:-18157177 None:intergenic
TCTGAGGAGCCTAATGTTAA+TGG 0.331391 2.3:+18156871 MS.gene068781:CDS
TGCAAGGTTGCTCCAATTCC+AGG 0.333863 2.3:+18154814 MS.gene068781:CDS
GGCGGAGCGCTTCTCGGTCT+TGG 0.347731 2.3:-18152067 None:intergenic
TTGACGATCTGGTTTGATTC+GGG 0.349530 2.3:-18152190 None:intergenic
ACTGATGACTTCCCAACATT+TGG 0.350955 2.3:-18154461 None:intergenic
GCAAGTATTAATAAGTCCTT+TGG 0.355327 2.3:+18154179 MS.gene068781:CDS
AATTACAATATTATTCTTAA+GGG 0.359879 2.3:+18152386 MS.gene068781:CDS
AAAGATGCGGCGGACCATAT+TGG 0.383957 2.3:+18155949 MS.gene068781:CDS
ATCATCTGGCAAACTCCTTA+AGG 0.385274 2.3:+18156398 MS.gene068781:CDS
TTCGAAGAGAAGTATGCTTC+TGG 0.392309 2.3:+18153307 MS.gene068781:CDS
GGTGGCGGCGGAGCGCTTCT+CGG 0.394421 2.3:-18152073 None:intergenic
ATTGACGATCTGGTTTGATT+CGG 0.397208 2.3:-18152191 None:intergenic
AGCACTCCAACGACGCCAAC+CGG 0.410953 2.3:+18152034 MS.gene068781:CDS
AAACTTATGATTCACTTGTT+GGG 0.419919 2.3:-18157176 None:intergenic
TCTGTATAATCCCCAGTGTC+TGG 0.420228 2.3:-18157048 None:intergenic
CTTCAGCTTTGCAAATCATC+TGG 0.430614 2.3:+18156384 MS.gene068781:CDS
TGCTTAGGGTTCACTTCTAT+CGG 0.432048 2.3:+18154373 MS.gene068781:intron
ACATCTATGCCATTAACATT+AGG 0.435407 2.3:-18156880 None:intergenic
ATACCGAACCATTGACGATC+TGG 0.435791 2.3:-18152201 None:intergenic
TTGGCGTCGTTGGAGTGCTT+TGG 0.439185 2.3:-18152030 None:intergenic
ATTGCTCCGGTTGGCGTCGT+TGG 0.440016 2.3:-18152040 None:intergenic
TGGCAGCAGATGCCTGGTTA+TGG 0.442559 2.3:-18156918 None:intergenic
TTCTTCAGATGTTGTTGTCC+AGG 0.442566 2.3:+18153441 MS.gene068781:CDS
CTTACGGTTACGAACGGGTC+GGG 0.448708 2.3:-18152121 None:intergenic
GTTTCAAAACCTCGCCAATA+TGG 0.451519 2.3:-18155963 None:intergenic
TCATCTTTGCTGCGGTCATA+AGG 0.452623 2.3:-18156777 None:intergenic
CAAAGAAATGTACCAGTTCA+AGG 0.453415 2.3:+18156976 MS.gene068781:CDS
GTGGATGGATCCTCCTCAGA+TGG 0.456488 2.3:-18157084 None:intergenic
AAGGCATCCTGTCGCGGAGG+AGG 0.459375 2.3:-18156841 None:intergenic
TTATATAAATCCCCTTGAAC+TGG 0.467150 2.3:-18156988 None:intergenic
TGGTACATTTCTTTGCTGCT+GGG 0.469996 2.3:-18156968 None:intergenic
TTGTTGGATATCCAAATGTT+GGG 0.472784 2.3:+18154450 MS.gene068781:CDS
GTGGATGGATCCTGCTCAGA+TGG 0.476614 2.3:-18157114 None:intergenic
AGGGTCAAAGCAAACGCATA+TGG 0.478390 2.3:+18153395 MS.gene068781:CDS
CTTTAATGGCAGCAGATGCC+TGG 0.480035 2.3:-18156924 None:intergenic
CTTGAGACGGCGGACGGTGG+CGG 0.486993 2.3:-18152088 None:intergenic
GCAGAAATAAGTTGCTCAGA+TGG 0.487234 2.3:-18157144 None:intergenic
GTGCGATCTAATTCCTGCTT+GGG 0.492181 2.3:+18154100 MS.gene068781:intron
CGGTCTTGGAGTCATTGCTC+CGG 0.493906 2.3:-18152053 None:intergenic
GGGTCAAAGCAAACGCATAT+GGG 0.495588 2.3:+18153396 MS.gene068781:CDS
TTCCAGGGGAAACAAAAGTC+TGG 0.495795 2.3:+18154830 MS.gene068781:CDS
CACTGAGGTCCCATCTGAGC+AGG 0.498975 2.3:+18157104 MS.gene068781:CDS
TCTGGTTTGATTCGGGTGGA+TGG 0.500388 2.3:-18152183 None:intergenic
ATTCCTGCTTGGGCAACAAA+AGG 0.500766 2.3:+18154110 MS.gene068781:CDS
TGACCCTTACGGTTACGAAC+GGG 0.505883 2.3:-18152126 None:intergenic
AGTGCGATCTAATTCCTGCT+TGG 0.506473 2.3:+18154099 MS.gene068781:intron
TTTGCTGCGGTCATAAGGTC+AGG 0.508113 2.3:-18156772 None:intergenic
AAACCAGATCGTCAATGGTT+CGG 0.508424 2.3:+18152198 MS.gene068781:CDS
CTGACCAACTTCCAGACACT+GGG 0.509068 2.3:+18157037 MS.gene068781:CDS
TTGTTGTGGTAGACAACTCC+TGG 0.509529 2.3:-18154895 None:intergenic
TGCTCAAGACATGACCCTTA+CGG 0.510670 2.3:-18152137 None:intergenic
TATGATTCACTTGTTGGGAC+CGG 0.510792 2.3:-18157171 None:intergenic
GAGACGGCGGACGGTGGCGG+CGG 0.511306 2.3:-18152085 None:intergenic
GCAACTTATTTCTGCTGAGC+CGG 0.516301 2.3:+18157152 MS.gene068781:CDS
GAGCGAAACGTTAACCTCTC+CGG 0.518412 2.3:+18152003 MS.gene068781:CDS
TTTGTTGGATATCCAAATGT+TGG 0.518902 2.3:+18154449 MS.gene068781:CDS
CTTGGAGTCATTGCTCCGGT+TGG 0.522751 2.3:-18152049 None:intergenic
GAATCAAACCAGATCGTCAA+TGG 0.528473 2.3:+18152193 MS.gene068781:CDS
CTGCTTGGGCAACAAAAGGA+TGG 0.530434 2.3:+18154114 MS.gene068781:CDS
GAGCTTATAAAATAAAAGAA+TGG 0.536265 2.3:+18156010 MS.gene068781:CDS
AGGACTTATTAATACTTGCA+TGG 0.542141 2.3:-18154175 None:intergenic
GATAAGCAAGCAATATCTGT+TGG 0.542451 2.3:+18154425 MS.gene068781:CDS
GCTGACCAACTTCCAGACAC+TGG 0.544164 2.3:+18157036 MS.gene068781:CDS
GCTTTGACCCTTCTCAAACA+TGG 0.549519 2.3:-18153383 None:intergenic
TAATATGTCATAGGTTTGCA+AGG 0.549737 2.3:+18154798 MS.gene068781:intron
TGATACTTCACGATTGGCAG+AGG 0.551420 2.3:+18156797 MS.gene068781:CDS
CAAAGATGATACTTCACGAT+TGG 0.552750 2.3:+18156791 MS.gene068781:CDS
GCAAGGTTGCTCCAATTCCA+GGG 0.553714 2.3:+18154815 MS.gene068781:CDS
TGAAACAGATGTTGTGCTGA+AGG 0.557161 2.3:+18154924 MS.gene068781:CDS
AATCCCCAGTGTCTGGAAGT+TGG 0.559535 2.3:-18157041 None:intergenic
AGGCATCCTGTCGCGGAGGA+GGG 0.561993 2.3:-18156840 None:intergenic
ATGATTTGCAAAGCTGAAGT+AGG 0.563324 2.3:-18156380 None:intergenic
TGATACAGGTTATAGATGCA+AGG 0.563934 2.3:+18153886 MS.gene068781:intron
AAGAAAGCTGATGGTTCTCA+AGG 0.565803 2.3:+18152646 MS.gene068781:CDS
TAATCATTGAGAAGCGACAT+AGG 0.566710 2.3:-18152419 None:intergenic
GTGAATATTGTAGCAATCGA+GGG 0.567017 2.3:+18152525 MS.gene068781:intron
GGATGCCTTGTCCGAGTCTG+AGG 0.567765 2.3:+18156855 MS.gene068781:CDS
AAAGAAATGTACCAGTTCAA+GGG 0.570482 2.3:+18156977 MS.gene068781:CDS
AACATTAGGCTCCTCAGACT+CGG 0.574413 2.3:-18156866 None:intergenic
TAATCAGAAGCTAAAAGACT+TGG 0.574791 2.3:-18152610 None:intergenic
TATTAATAAGTCCTTTGGAA+AGG 0.575592 2.3:+18154184 MS.gene068781:CDS
TGATAACATCTTGTGCCTTG+TGG 0.576348 2.3:-18153912 None:intergenic
CTTGCATGGAATGCTAGCGT+TGG 0.576468 2.3:-18154161 None:intergenic
TCAGATGGGACCTCAGTGGA+TGG 0.578068 2.3:-18157099 None:intergenic
ATTACAATATTATTCTTAAG+GGG 0.583366 2.3:+18152387 MS.gene068781:CDS
GCAGAAGCTGATGAAGCAGA+TGG 0.586404 2.3:+18153337 MS.gene068781:CDS
CAAGGTTGCTCCAATTCCAG+GGG 0.586597 2.3:+18154816 MS.gene068781:CDS
CCGACCCGTTCGTAACCGTA+AGG 0.586850 2.3:+18152122 MS.gene068781:CDS
GCTTCTCAATGATTATCAGA+AGG 0.590205 2.3:+18152427 MS.gene068781:CDS
GTACATCTTGAGACGGCGGA+CGG 0.590589 2.3:-18152094 None:intergenic
GCGACATACCATGTTTGAGA+AGG 0.592879 2.3:+18153375 MS.gene068781:CDS
AGTGCTTTGGTTTACCGGAG+AGG 0.596572 2.3:-18152017 None:intergenic
ACGATCTGGTTTGATTCGGG+TGG 0.597307 2.3:-18152187 None:intergenic
GATACAGGTTATAGATGCAA+GGG 0.598294 2.3:+18153887 MS.gene068781:intron
TGGATGGATCCTGCTCAGAT+GGG 0.599401 2.3:-18157113 None:intergenic
CGACATACCATGTTTGAGAA+GGG 0.600865 2.3:+18153376 MS.gene068781:CDS
GCTTTAGCTAAGAAAGCTGA+TGG 0.603579 2.3:+18152637 MS.gene068781:CDS
TGGATGGATCCTCCTCAGAT+GGG 0.603808 2.3:-18157083 None:intergenic
TGTGAATATTGTAGCAATCG+AGG 0.604952 2.3:+18152524 MS.gene068781:intron
CGAGGCAGTTGACCATAACC+AGG 0.605444 2.3:+18156906 MS.gene068781:CDS
GATACTTCACGATTGGCAGA+GGG 0.606800 2.3:+18156798 MS.gene068781:CDS
CATCTTGAGACGGCGGACGG+TGG 0.606870 2.3:-18152091 None:intergenic
TCGGACAAGGCATCCTGTCG+CGG 0.610044 2.3:-18156847 None:intergenic
AGAGAAGTATGCTTCTGGTA+CGG 0.614990 2.3:+18153312 MS.gene068781:CDS
AAGAAATGTACCAGTTCAAG+GGG 0.617586 2.3:+18156978 MS.gene068781:CDS
AGGCTCCTCAGACTCGGACA+AGG 0.620195 2.3:-18156860 None:intergenic
AGATGTTGTGCTGAAGGGTG+TGG 0.624230 2.3:+18154930 MS.gene068781:CDS
TCAAAAGTATACCTTTCCAA+AGG 0.626771 2.3:-18154195 None:intergenic
GAAACAGATGTTGTGCTGAA+GGG 0.627938 2.3:+18154925 MS.gene068781:CDS
TTGCTCAGATGGAACATCAG+TGG 0.632602 2.3:-18157133 None:intergenic
CTGTTTCAGAGTCATTGTTG+TGG 0.635053 2.3:-18154909 None:intergenic
CCTTACGGTTACGAACGGGT+CGG 0.635620 2.3:-18152122 None:intergenic
ATGACCCTTACGGTTACGAA+CGG 0.636046 2.3:-18152127 None:intergenic
TGCGGCGGACCATATTGGCG+AGG 0.636608 2.3:+18155954 MS.gene068781:CDS
CTGCTCAGATGGGACCTCAG+TGG 0.639451 2.3:-18157103 None:intergenic
AGTATATTACACTTACAAAG+AGG 0.642789 2.3:+18154854 MS.gene068781:CDS
CGACCCGTTCGTAACCGTAA+GGG 0.644461 2.3:+18152123 MS.gene068781:CDS
TGAAGATAGTGACCCATCTG+AGG 0.647765 2.3:+18157071 MS.gene068781:CDS
AAATTGCAAGCACAAACACA+TGG 0.648597 2.3:+18153956 MS.gene068781:CDS
GACAAGGCATCCTGTCGCGG+AGG 0.650985 2.3:-18156844 None:intergenic
AGATAGTGACCCATCTGAGG+AGG 0.654714 2.3:+18157074 MS.gene068781:CDS
GGTCAAAGCAAACGCATATG+GGG 0.655411 2.3:+18153397 MS.gene068781:CDS
TCAGATGGAACATCAGTGGA+TGG 0.659620 2.3:-18157129 None:intergenic
GTGAAGTATCATCTTTGCTG+CGG 0.666582 2.3:-18156785 None:intergenic
AACAAACTTGAAAGATGCGG+CGG 0.666795 2.3:+18155939 MS.gene068781:CDS
TGTAACAAACTTGAAAGATG+CGG 0.682782 2.3:+18155936 MS.gene068781:CDS
ATACTTCACGATTGGCAGAG+GGG 0.703263 2.3:+18156799 MS.gene068781:CDS
TAATGGCATAGATGTTGACG+AGG 0.722337 2.3:+18156888 MS.gene068781:CDS
ATAGATGCAAGGGATCCACA+AGG 0.751368 2.3:+18153897 MS.gene068781:CDS
TGACCAACTTCCAGACACTG+GGG 0.753638 2.3:+18157038 MS.gene068781:CDS
TGAGGAGGATCCATCCACTG+AGG 0.772372 2.3:+18157089 MS.gene068781:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAATAGTTTAAATGA+AGG + chr2.3:18155781-18155800 MS.gene068781:intron 10.0%
!! AATAAAATAGTTTAAATGAA+GGG + chr2.3:18155782-18155801 MS.gene068781:intron 10.0%
!! AATGTAAAGAAATAAATTAA+GGG - chr2.3:18154048-18154067 None:intergenic 10.0%
!! AATTACAATATTATTCTTAA+GGG + chr2.3:18152386-18152405 MS.gene068781:CDS 10.0%
!! TAATGTAAAGAAATAAATTA+AGG - chr2.3:18154049-18154068 None:intergenic 10.0%
!! TAATTACAATATTATTCTTA+AGG + chr2.3:18152385-18152404 MS.gene068781:CDS 10.0%
!! TTACTTTGATATTAAAAAAA+AGG + chr2.3:18156447-18156466 MS.gene068781:intron 10.0%
!! ATAATGAATTTATATTCTGT+GGG - chr2.3:18155650-18155669 None:intergenic 15.0%
!! ATTACAATATTATTCTTAAG+GGG + chr2.3:18152387-18152406 MS.gene068781:CDS 15.0%
!! TATAATGAATTTATATTCTG+TGG - chr2.3:18155651-18155670 None:intergenic 15.0%
!! TCACAATAATATTAAAACAA+TGG - chr2.3:18153554-18153573 None:intergenic 15.0%
!! TCTAGAAAATTATTTAGATT+TGG - chr2.3:18155080-18155099 None:intergenic 15.0%
!! TTCAAAAATCAGAAAAATAT+AGG - chr2.3:18155473-18155492 None:intergenic 15.0%
!! TTTATTTGCTTAATAAAGAA+TGG + chr2.3:18153150-18153169 MS.gene068781:intron 15.0%
!!! ATGTTTTTCCTTAAATAATT+TGG - chr2.3:18153061-18153080 None:intergenic 15.0%
!!! TTAATACTTTACTTATTTTC+AGG + chr2.3:18155909-18155928 MS.gene068781:intron 15.0%
!!! TTTATTTTATTTTAACCCAT+GGG + chr2.3:18155120-18155139 MS.gene068781:intron 15.0%
!!! TTTTATTTTATTTTAACCCA+TGG + chr2.3:18155119-18155138 MS.gene068781:intron 15.0%
!! AAAGTTCAAGAAAAACAAAT+TGG - chr2.3:18156681-18156700 None:intergenic 20.0%
!! AATTCAAAAAGAATACCTTA+AGG - chr2.3:18156416-18156435 None:intergenic 20.0%
!! ATTTAAGGAAAAACATGAAA+GGG + chr2.3:18153065-18153084 MS.gene068781:intron 20.0%
!! GAGCTTATAAAATAAAAGAA+TGG + chr2.3:18156010-18156029 MS.gene068781:CDS 20.0%
!! GGTAAAATATGTAAGAAAAA+TGG + chr2.3:18155803-18155822 MS.gene068781:intron 20.0%
!! TAATAGTTTCTTAAAACCAA+AGG + chr2.3:18152888-18152907 MS.gene068781:intron 20.0%
!! TATATTTCTTATGTAAGACA+AGG + chr2.3:18156701-18156720 MS.gene068781:intron 20.0%
!! TATTTAAGGAAAAACATGAA+AGG + chr2.3:18153064-18153083 MS.gene068781:intron 20.0%
!!! AAATTCAGCTTGTTAATTTT+AGG + chr2.3:18152265-18152284 MS.gene068781:intron 20.0%
!!! AATTCAGCTTGTTAATTTTA+GGG + chr2.3:18152266-18152285 MS.gene068781:intron 20.0%
!!! ATATTATTCATGTGTTGTTT+TGG + chr2.3:18155501-18155520 MS.gene068781:intron 20.0%
!!! CTCTAAAACCAAATTATTTA+AGG + chr2.3:18153050-18153069 MS.gene068781:intron 20.0%
!!! GTCATATACTCATATTTTAA+TGG + chr2.3:18155705-18155724 MS.gene068781:intron 20.0%
!!! TAAACAAAATTTTAGCAACA+GGG - chr2.3:18153477-18153496 None:intergenic 20.0%
!!! TATGTGAATTTATTGGTTTA+TGG + chr2.3:18152500-18152519 MS.gene068781:intron 20.0%
!!! TATTATTCATGTGTTGTTTT+GGG + chr2.3:18155502-18155521 MS.gene068781:intron 20.0%
!!! TTAAACAAAATTTTAGCAAC+AGG - chr2.3:18153478-18153497 None:intergenic 20.0%
! AAAATATAGGATGTATCACA+AGG - chr2.3:18155460-18155479 None:intergenic 25.0%
! AAGTTTGTCATAGTAAAGTA+AGG + chr2.3:18153678-18153697 MS.gene068781:intron 25.0%
! AATATTGTTCCTATTGTAGT+GGG + chr2.3:18155679-18155698 MS.gene068781:intron 25.0%
! AGATTACTAAACAATCATGT+TGG + chr2.3:18155419-18155438 MS.gene068781:intron 25.0%
! AGGTTAAAAACAACATCATT+TGG - chr2.3:18153239-18153258 None:intergenic 25.0%
! AGTATATTACACTTACAAAG+AGG + chr2.3:18154854-18154873 MS.gene068781:CDS 25.0%
! AGTTTGTCATAGTAAAGTAA+GGG + chr2.3:18153679-18153698 MS.gene068781:intron 25.0%
! CAAACCTATGACATATTAAT+CGG - chr2.3:18154796-18154815 None:intergenic 25.0%
! CTTGTTCAGATTCATTAAAT+AGG - chr2.3:18154710-18154729 None:intergenic 25.0%
! GCTTAATTGTTGAAATGATT+TGG + chr2.3:18152472-18152491 MS.gene068781:intron 25.0%
! GGTGAATTATGTGAATTTAT+TGG + chr2.3:18152493-18152512 MS.gene068781:intron 25.0%
! TAAAGATAATCTATGTAGCA+CGG + chr2.3:18152735-18152754 MS.gene068781:intron 25.0%
! TAATATTGTTCCTATTGTAG+TGG + chr2.3:18155678-18155697 MS.gene068781:intron 25.0%
! TTTAAGGAAAAACATGAAAG+GGG + chr2.3:18153066-18153085 MS.gene068781:intron 25.0%
! TTTCTTAAAACCAAAGGAAA+GGG + chr2.3:18152894-18152913 MS.gene068781:intron 25.0%
!! AAAGATATAAAGAGCATACA+TGG - chr2.3:18155839-18155858 None:intergenic 25.0%
!! AAGATATAAAGAGCATACAT+GGG - chr2.3:18155838-18155857 None:intergenic 25.0%
!! ACTTTACATGCCATTTATAT+CGG + chr2.3:18156233-18156252 MS.gene068781:intron 25.0%
!! TATTAATAAGTCCTTTGGAA+AGG + chr2.3:18154184-18154203 MS.gene068781:CDS 25.0%
!!! AAACTTGTTCTTTTCTATCT+AGG + chr2.3:18155311-18155330 MS.gene068781:intron 25.0%
!!! AACATTTGCAATAGCTTTAA+TGG - chr2.3:18156941-18156960 None:intergenic 25.0%
!!! TATTTAAGTTGATGAATCCA+TGG + chr2.3:18153779-18153798 MS.gene068781:intron 25.0%
!!! TTCATCTTTAGTTGATTTGT+TGG + chr2.3:18154219-18154238 MS.gene068781:intron 25.0%
!!! TTCCTGCTTAAGTTTTAATT+TGG + chr2.3:18154541-18154560 MS.gene068781:intron 25.0%
AAAGAAATGTACCAGTTCAA+GGG + chr2.3:18156977-18156996 MS.gene068781:CDS 30.0%
AAGACACAAAAACAGTTATC+AGG - chr2.3:18153259-18153278 None:intergenic 30.0%
AAGGGAAAAAACTAGAAGTT+GGG + chr2.3:18153697-18153716 MS.gene068781:intron 30.0%
AAGTTGCTTATAAATGTGAC+CGG - chr2.3:18154752-18154733 None:intergenic 30.0%
ACATCTATGCCATTAACATT+AGG - chr2.3:18156883-18156902 None:intergenic 30.0%
AGGACTTATTAATACTTGCA+TGG - chr2.3:18154178-18154197 None:intergenic 30.0%
ATAAGATAGCAAATAGCTGA+AGG - chr2.3:18154337-18154356 None:intergenic 30.0%
ATACACAGATAACCAAATCA+AGG - chr2.3:18156259-18156278 None:intergenic 30.0%
ATATTGTTCCTATTGTAGTG+GGG + chr2.3:18155680-18155699 MS.gene068781:intron 30.0%
ATCTAGTCTAAGTCAAATTG+AGG - chr2.3:18156516-18156535 None:intergenic 30.0%
ATGCTATTACTTCAAAGGAA+AGG + chr2.3:18152935-18152954 MS.gene068781:intron 30.0%
ATTAACGCATTACTGGAAAT+TGG - chr2.3:18154245-18154264 None:intergenic 30.0%
ATTGCTCATTATCATGCTTA+GGG + chr2.3:18154359-18154378 MS.gene068781:intron 30.0%
CGACAAACCTATCAAAATAA+GGG - chr2.3:18155257-18155276 None:intergenic 30.0%
CTCCAAATTAAAACTTAAGC+AGG - chr2.3:18154546-18154565 None:intergenic 30.0%
CTTCAATGCTATTACTTCAA+AGG + chr2.3:18152930-18152949 MS.gene068781:intron 30.0%
GAAAGAAATAACAAACCCAT+GGG - chr2.3:18155138-18155157 None:intergenic 30.0%
GCAAGTATTAATAAGTCCTT+TGG + chr2.3:18154179-18154198 MS.gene068781:CDS 30.0%
GTTTCTTAAAACCAAAGGAA+AGG + chr2.3:18152893-18152912 MS.gene068781:intron 30.0%
TAAAAAAAGACAAGTGAAGC+TGG + chr2.3:18154272-18154291 MS.gene068781:intron 30.0%
TAAGGGAAAAAACTAGAAGT+TGG + chr2.3:18153696-18153715 MS.gene068781:intron 30.0%
TAATATGTCATAGGTTTGCA+AGG + chr2.3:18154798-18154817 MS.gene068781:intron 30.0%
TAATCAGAAGCTAAAAGACT+TGG - chr2.3:18152613-18152632 None:intergenic 30.0%
TATTGCTCATTATCATGCTT+AGG + chr2.3:18154358-18154377 MS.gene068781:intron 30.0%
TGAAAGAAATAACAAACCCA+TGG - chr2.3:18155139-18155158 None:intergenic 30.0%
TGCTATTACTTCAAAGGAAA+GGG + chr2.3:18152936-18152955 MS.gene068781:intron 30.0%
TGTAACAAACTTGAAAGATG+CGG + chr2.3:18155936-18155955 MS.gene068781:CDS 30.0%
TTATATAAATCCCCTTGAAC+TGG - chr2.3:18156991-18157010 None:intergenic 30.0%
TTCACCAAATAAAAGACTCA+TGG - chr2.3:18152992-18153011 None:intergenic 30.0%
TTGACATGCTGTAACATAAA+GGG - chr2.3:18156636-18156655 None:intergenic 30.0%
TTGTTGGATATCCAAATGTT+GGG + chr2.3:18154450-18154469 MS.gene068781:CDS 30.0%
TTTGACATGCTGTAACATAA+AGG - chr2.3:18156637-18156656 None:intergenic 30.0%
TTTGTTGGATATCCAAATGT+TGG + chr2.3:18154449-18154468 MS.gene068781:CDS 30.0%
! GTAGCTTGTATACAAAAACT+AGG + chr2.3:18156308-18156327 MS.gene068781:intron 30.0%
! GTTTGTGTTTGTGATTTGTA+GGG + chr2.3:18152294-18152313 MS.gene068781:intron 30.0%
! TCAAAAGTATACCTTTCCAA+AGG - chr2.3:18154198-18154217 None:intergenic 30.0%
! TGAAGGTATACAAGTGTTAA+TGG - chr2.3:18154320-18154339 None:intergenic 30.0%
! TTATTTGGTGAAATTCACGT+TGG + chr2.3:18153000-18153019 MS.gene068781:intron 30.0%
! TTCATTGATTAACGCATTAC+TGG - chr2.3:18154252-18154271 None:intergenic 30.0%
!! ATCTTTTTGATTGATTGTCC+AGG + chr2.3:18154877-18154896 MS.gene068781:CDS 30.0%
!! CTCTTGTTTCCTTTTTACTT+TGG + chr2.3:18154961-18154980 MS.gene068781:intron 30.0%
!! TGAGTTTTTCAGAGAAGAAA+TGG + chr2.3:18152346-18152365 MS.gene068781:CDS 30.0%
!!! GCTTGTTAATTTTAGGGTTT+TGG + chr2.3:18152272-18152291 MS.gene068781:intron 30.0%
!!! TCTTTTAGCTTCTGATTATG+AGG + chr2.3:18152615-18152634 MS.gene068781:CDS 30.0%
AAATTGCAAGCACAAACACA+TGG + chr2.3:18153956-18153975 MS.gene068781:CDS 35.0%
AACCCTGATGACAAGATATA+TGG - chr2.3:18156346-18156365 None:intergenic 35.0%
AAGAAATGTACCAGTTCAAG+GGG + chr2.3:18156978-18156997 MS.gene068781:CDS 35.0%
AATCTAAGAATAGCTCTTCC+TGG - chr2.3:18155536-18155555 None:intergenic 35.0%
AGCGACAAACTTGTGAAAAT+AGG - chr2.3:18155288-18155307 None:intergenic 35.0%
ATCAACAAGTATTCCCACTA+AGG - chr2.3:18153195-18153214 None:intergenic 35.0%
ATCACGCAACCAAAGTAAAA+AGG - chr2.3:18154973-18154992 None:intergenic 35.0%
ATCTAAGAATAGCTCTTCCT+GGG - chr2.3:18155535-18155554 None:intergenic 35.0%
ATGCCATATATCTTGTCATC+AGG + chr2.3:18156340-18156359 MS.gene068781:intron 35.0%
CAAAGAAATGTACCAGTTCA+AGG + chr2.3:18156976-18156995 MS.gene068781:CDS 35.0%
CAAAGATGATACTTCACGAT+TGG + chr2.3:18156791-18156810 MS.gene068781:CDS 35.0%
CAAATCAAGGCCGATATAAA+TGG - chr2.3:18156246-18156265 None:intergenic 35.0%
CAAGCATCTTGTAAGGAATT+AGG + chr2.3:18156172-18156191 MS.gene068781:intron 35.0%
CACAATCCATCAACATAGAA+AGG - chr2.3:18153508-18153527 None:intergenic 35.0%
CATTTATATCGGCCTTGATT+TGG + chr2.3:18156244-18156263 MS.gene068781:intron 35.0%
CCAAATAAAAGACTCATGGT+TGG - chr2.3:18152988-18153007 None:intergenic 35.0%
GAAACACATAAATGCTTGTC+AGG - chr2.3:18153532-18153551 None:intergenic 35.0%
GATAAGCAAGCAATATCTGT+TGG + chr2.3:18154425-18154444 MS.gene068781:CDS 35.0%
GATACAGGTTATAGATGCAA+GGG + chr2.3:18153887-18153906 MS.gene068781:intron 35.0%
GCGACAAACCTATCAAAATA+AGG - chr2.3:18155258-18155277 None:intergenic 35.0%
GCGACAAACTTGTGAAAATA+GGG - chr2.3:18155287-18155306 None:intergenic 35.0%
GCTTCTCAATGATTATCAGA+AGG + chr2.3:18152427-18152446 MS.gene068781:CDS 35.0%
GTAAGGAATTAGGAACAGTA+AGG + chr2.3:18156182-18156201 MS.gene068781:intron 35.0%
GTATACAAGTGTTAATGGAG+AGG - chr2.3:18154315-18154334 None:intergenic 35.0%
GTGAATATTGTAGCAATCGA+GGG + chr2.3:18152525-18152544 MS.gene068781:intron 35.0%
GTTCGGTATGTTCAATTTCA+GGG + chr2.3:18152215-18152234 MS.gene068781:intron 35.0%
TAATATACGACCAGTGTAAG+TGG - chr2.3:18155614-18155633 None:intergenic 35.0%
TAATCATTGAGAAGCGACAT+AGG - chr2.3:18152422-18152441 None:intergenic 35.0%
TATTGTATCTGTCCTGATAC+AGG + chr2.3:18153872-18153891 MS.gene068781:intron 35.0%
TCTGCAAACGAAAGTTATGT+AGG - chr2.3:18153283-18153302 None:intergenic 35.0%
TCTTCACCTTTCTATGTTGA+TGG + chr2.3:18153499-18153518 MS.gene068781:intron 35.0%
TGACTAGCATATTACCTATG+TGG + chr2.3:18155572-18155591 MS.gene068781:intron 35.0%
TGATACAGGTTATAGATGCA+AGG + chr2.3:18153886-18153905 MS.gene068781:intron 35.0%
TGCCATATATCTTGTCATCA+GGG + chr2.3:18156341-18156360 MS.gene068781:intron 35.0%
TGCTCTGTTAATGTGAAGTA+CGG + chr2.3:18153633-18153652 MS.gene068781:intron 35.0%
TGCTTATAAATGTGACCAGA+GGG + chr2.3:18154737-18154756 MS.gene068781:intron 35.0%
TGTAGTTCAAGCATCTTGTA+AGG + chr2.3:18156165-18156184 MS.gene068781:intron 35.0%
TGTGAATATTGTAGCAATCG+AGG + chr2.3:18152524-18152543 MS.gene068781:intron 35.0%
TTGCATCTATAACCTGTATC+AGG - chr2.3:18153887-18153906 None:intergenic 35.0%
TTGCTTATAAATGTGACCAG+AGG + chr2.3:18154736-18154755 MS.gene068781:intron 35.0%
! AATCAAAAAGTGTGCCTCTT+AGG - chr2.3:18155185-18155204 None:intergenic 35.0%
! ATAAAGAGCATACATGGGTT+TGG - chr2.3:18155833-18155852 None:intergenic 35.0%
! ATGATTTGCAAAGCTGAAGT+AGG - chr2.3:18156383-18156402 None:intergenic 35.0%
! ATTGACGATCTGGTTTGATT+CGG - chr2.3:18152194-18152213 None:intergenic 35.0%
! CAGTTTTCTGTTTCCTTAGT+GGG + chr2.3:18153179-18153198 MS.gene068781:intron 35.0%
! CATGGTGCTTTTATTGAACA+AGG + chr2.3:18153974-18153993 MS.gene068781:CDS 35.0%
! CCAACCATGAGTCTTTTATT+TGG + chr2.3:18152985-18153004 MS.gene068781:intron 35.0%
! GGTTTATTTAGCTCATCCAT+AGG + chr2.3:18153087-18153106 MS.gene068781:intron 35.0%
! GGTTTGTGTTTGTGATTTGT+AGG + chr2.3:18152293-18152312 MS.gene068781:intron 35.0%
! TAAAGAGCATACATGGGTTT+GGG - chr2.3:18155832-18155851 None:intergenic 35.0%
! TATTATCGTTGTTGCTGTTG+TGG + chr2.3:18155885-18155904 MS.gene068781:intron 35.0%
! TTGATGCGACTTTTACTCAA+TGG + chr2.3:18156731-18156750 MS.gene068781:intron 35.0%
! TTTACTCAATGGCTTTTCCA+GGG + chr2.3:18156742-18156761 MS.gene068781:intron 35.0%
! TTTTACTCAATGGCTTTTCC+AGG + chr2.3:18156741-18156760 MS.gene068781:intron 35.0%
!! TAAGTTGATGAATCCATGGT+TGG + chr2.3:18153783-18153802 MS.gene068781:intron 35.0%
!!! GCAATATCTGTTGGTTTTGT+TGG + chr2.3:18154434-18154453 MS.gene068781:CDS 35.0%
AAACCAGATCGTCAATGGTT+CGG + chr2.3:18152198-18152217 MS.gene068781:CDS 40.0%
AACAAACTTGAAAGATGCGG+CGG + chr2.3:18155939-18155958 MS.gene068781:CDS 40.0%
AAGAAAGCTGATGGTTCTCA+AGG + chr2.3:18152646-18152665 MS.gene068781:CDS 40.0%
ACTGATGACTTCCCAACATT+TGG - chr2.3:18154464-18154483 None:intergenic 40.0%
AGGAATTAGGAACAGTAAGG+TGG + chr2.3:18156185-18156204 MS.gene068781:intron 40.0%
ATCATCTGGCAAACTCCTTA+AGG + chr2.3:18156398-18156417 MS.gene068781:CDS 40.0%
ATCGCACTGCAAAAAGAATG+AGG - chr2.3:18154087-18154106 None:intergenic 40.0%
CAAACAAATTCGACCAACCA+TGG - chr2.3:18153799-18153818 None:intergenic 40.0%
CAAGTGTTAATGGAGAGGAA+AGG - chr2.3:18154310-18154329 None:intergenic 40.0%
CAGAACTTATGTAGCCTAAG+AGG + chr2.3:18155168-18155187 MS.gene068781:intron 40.0%
CAGGAAATAAGAAGCAGTGA+AGG - chr2.3:18154527-18154546 None:intergenic 40.0%
CGACATACCATGTTTGAGAA+GGG + chr2.3:18153376-18153395 MS.gene068781:CDS 40.0%
CTACTATTCAGCACGAAGTA+AGG - chr2.3:18156051-18156070 None:intergenic 40.0%
CTGTTTCAGAGTCATTGTTG+TGG - chr2.3:18154912-18154931 None:intergenic 40.0%
CTTCAGCTTTGCAAATCATC+TGG + chr2.3:18156384-18156403 MS.gene068781:CDS 40.0%
GAAACAGATGTTGTGCTGAA+GGG + chr2.3:18154925-18154944 MS.gene068781:CDS 40.0%
GAATCAAACCAGATCGTCAA+TGG + chr2.3:18152193-18152212 MS.gene068781:CDS 40.0%
GCAGAAATAAGTTGCTCAGA+TGG - chr2.3:18157147-18157166 None:intergenic 40.0%
GCTTTAGCTAAGAAAGCTGA+TGG + chr2.3:18152637-18152656 MS.gene068781:CDS 40.0%
GGTCCAAATGCATCAGAAAA+AGG - chr2.3:18152571-18152590 None:intergenic 40.0%
GTGGCCGATTAATATGTCAT+AGG + chr2.3:18154789-18154808 MS.gene068781:intron 40.0%
GTTTCAAAACCTCGCCAATA+TGG - chr2.3:18155966-18155985 None:intergenic 40.0%
TAACCAAGTTACAACGCCTA+TGG - chr2.3:18153106-18153125 None:intergenic 40.0%
TAATGGCATAGATGTTGACG+AGG + chr2.3:18156888-18156907 MS.gene068781:CDS 40.0%
TCTGAGGAGCCTAATGTTAA+TGG + chr2.3:18156871-18156890 MS.gene068781:CDS 40.0%
TGAAACAGATGTTGTGCTGA+AGG + chr2.3:18154924-18154943 MS.gene068781:CDS 40.0%
TGATAACATCTTGTGCCTTG+TGG - chr2.3:18153915-18153934 None:intergenic 40.0%
TGCTTAGGGTTCACTTCTAT+CGG + chr2.3:18154373-18154392 MS.gene068781:intron 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr2.3:18154620-18154639 None:intergenic 40.0%
TGGTACATTTCTTTGCTGCT+GGG - chr2.3:18156971-18156990 None:intergenic 40.0%
TTCTTCAGATGTTGTTGTCC+AGG + chr2.3:18153441-18153460 MS.gene068781:CDS 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr2.3:18154621-18154640 None:intergenic 40.0%
! AGAGAAGTATGCTTCTGGTA+CGG + chr2.3:18153312-18153331 MS.gene068781:CDS 40.0%
! CGAGACTTTTCTCTCAATTC+TGG + chr2.3:18155218-18155237 MS.gene068781:intron 40.0%
! GACTTTTCTCTCAATTCTGG+TGG + chr2.3:18155221-18155240 MS.gene068781:intron 40.0%
! GAGCCTTTTTCTGATGCATT+TGG + chr2.3:18152565-18152584 MS.gene068781:CDS 40.0%
! GCAGTTTTCTGTTTCCTTAG+TGG + chr2.3:18153178-18153197 MS.gene068781:intron 40.0%
! GGTTCGGTATGTTCAATTTC+AGG + chr2.3:18152214-18152233 MS.gene068781:intron 40.0%
! GTGAAGTATCATCTTTGCTG+CGG - chr2.3:18156788-18156807 None:intergenic 40.0%
! TATGATTCACTTGTTGGGAC+CGG - chr2.3:18157174-18157193 None:intergenic 40.0%
! TTCGAAGAGAAGTATGCTTC+TGG + chr2.3:18153307-18153326 MS.gene068781:CDS 40.0%
! TTCTTTAGCTCCATCACAGA+GGG - chr2.3:18156542-18156561 None:intergenic 40.0%
! TTGACGATCTGGTTTGATTC+GGG - chr2.3:18152193-18152212 None:intergenic 40.0%
! TTTCTTTAGCTCCATCACAG+AGG - chr2.3:18156543-18156562 None:intergenic 40.0%
! TTTTGTACATCTTGAGACGG+CGG - chr2.3:18152101-18152120 None:intergenic 40.0%
!! ACTTTTGTTTCCCCTGGAAT+TGG - chr2.3:18154829-18154848 None:intergenic 40.0%
!! GGGTTTTGTACATCTTGAGA+CGG - chr2.3:18152104-18152123 None:intergenic 40.0%
!! GGTCGCTTTCTTTTAGTCTT+AGG - chr2.3:18152592-18152611 None:intergenic 40.0%
!! TCTCAATTCTGGTGGATTCT+GGG + chr2.3:18155229-18155248 MS.gene068781:intron 40.0%
!! TTAGCAGGTTGATTGACATG+TGG + chr2.3:18154770-18154789 MS.gene068781:intron 40.0%
!!! CTGGGAACCCTTATTTTGAT+AGG + chr2.3:18155247-18155266 MS.gene068781:intron 40.0%
!!! GGTTTTGAAACGTGTGAAGA+AGG + chr2.3:18155975-18155994 MS.gene068781:CDS 40.0%
AACATTAGGCTCCTCAGACT+CGG - chr2.3:18156869-18156888 None:intergenic 45.0%
ACTAGATATGCCCTCTGTGA+TGG + chr2.3:18156529-18156548 MS.gene068781:intron 45.0%
AGGGTCAAAGCAAACGCATA+TGG + chr2.3:18153395-18153414 MS.gene068781:CDS 45.0%
AGTGCGATCTAATTCCTGCT+TGG + chr2.3:18154099-18154118 MS.gene068781:intron 45.0%
ATACCGAACCATTGACGATC+TGG - chr2.3:18152204-18152223 None:intergenic 45.0%
ATACTTCACGATTGGCAGAG+GGG + chr2.3:18156799-18156818 MS.gene068781:CDS 45.0%
ATAGATGCAAGGGATCCACA+AGG + chr2.3:18153897-18153916 MS.gene068781:CDS 45.0%
ATGACCCTTACGGTTACGAA+CGG - chr2.3:18152130-18152149 None:intergenic 45.0%
ATTCCTGCTTGGGCAACAAA+AGG + chr2.3:18154110-18154129 MS.gene068781:CDS 45.0%
CTCCAGAATTATACTCCCTC+CGG + chr2.3:18154602-18154621 MS.gene068781:intron 45.0%
CTGGTACATTTCTTTGCTGC+TGG - chr2.3:18156972-18156991 None:intergenic 45.0%
GATACTTCACGATTGGCAGA+GGG + chr2.3:18156798-18156817 MS.gene068781:CDS 45.0%
GCGACATACCATGTTTGAGA+AGG + chr2.3:18153375-18153394 MS.gene068781:CDS 45.0%
GCTAAAATGCTTACTCCCTC+TGG - chr2.3:18154755-18154774 None:intergenic 45.0%
GCTTTGACCCTTCTCAAACA+TGG - chr2.3:18153386-18153405 None:intergenic 45.0%
GGATGTATCACAAGGCTGAT+TGG - chr2.3:18155452-18155471 None:intergenic 45.0%
GGGTAAAATGACAGCCACAT+AGG - chr2.3:18155589-18155608 None:intergenic 45.0%
GGGTCAAAGCAAACGCATAT+GGG + chr2.3:18153396-18153415 MS.gene068781:CDS 45.0%
GGTCAAAGCAAACGCATATG+GGG + chr2.3:18153397-18153416 MS.gene068781:CDS 45.0%
GTGCGATCTAATTCCTGCTT+GGG + chr2.3:18154100-18154119 MS.gene068781:intron 45.0%
TATGACCACCCCACTACAAT+AGG - chr2.3:18155691-18155710 None:intergenic 45.0%
TCAGATGGAACATCAGTGGA+TGG - chr2.3:18157132-18157151 None:intergenic 45.0%
TCATCTTTGCTGCGGTCATA+AGG - chr2.3:18156780-18156799 None:intergenic 45.0%
TCTGTATAATCCCCAGTGTC+TGG - chr2.3:18157051-18157070 None:intergenic 45.0%
TGAAGATAGTGACCCATCTG+AGG + chr2.3:18157071-18157090 MS.gene068781:CDS 45.0%
TGATACTTCACGATTGGCAG+AGG + chr2.3:18156797-18156816 MS.gene068781:CDS 45.0%
TGCTCAAGACATGACCCTTA+CGG - chr2.3:18152140-18152159 None:intergenic 45.0%
TTCCAGGGGAAACAAAAGTC+TGG + chr2.3:18154830-18154849 MS.gene068781:CDS 45.0%
TTGCTCAGATGGAACATCAG+TGG - chr2.3:18157136-18157155 None:intergenic 45.0%
TTGTTGTGGTAGACAACTCC+TGG - chr2.3:18154898-18154917 None:intergenic 45.0%
! CATCCATAGGCGTTGTAACT+TGG + chr2.3:18153100-18153119 MS.gene068781:intron 45.0%
! GTTGGAGTGCTTTGGTTTAC+CGG - chr2.3:18152025-18152044 None:intergenic 45.0%
! TTGTTCCTATTGTAGTGGGG+TGG + chr2.3:18155683-18155702 MS.gene068781:intron 45.0%
! TTTTACCCAGCCACTTACAC+TGG + chr2.3:18155601-18155620 MS.gene068781:intron 45.0%
!! CTCTCAATTCTGGTGGATTC+TGG + chr2.3:18155228-18155247 MS.gene068781:intron 45.0%
!! GAGGGAGTAAGCATTTTAGC+AGG + chr2.3:18154755-18154774 MS.gene068781:intron 45.0%
!! GCAACTTATTTCTGCTGAGC+CGG + chr2.3:18157152-18157171 MS.gene068781:CDS 45.0%
!!! TTGTTTTGGGACTAAGTCCC+AGG + chr2.3:18155515-18155534 MS.gene068781:intron 45.0%
AAAGATGCGGCGGACCATAT+TGG + chr2.3:18155949-18155968 MS.gene068781:CDS 50.0%
AATCCCCAGTGTCTGGAAGT+TGG - chr2.3:18157044-18157063 None:intergenic 50.0%
ACATCCAGTCTGACGCAGTA+CGG - chr2.3:18155362-18155381 None:intergenic 50.0%
AGATAGTGACCCATCTGAGG+AGG + chr2.3:18157074-18157093 MS.gene068781:CDS 50.0%
AGATGTTGTGCTGAAGGGTG+TGG + chr2.3:18154930-18154949 MS.gene068781:CDS 50.0%
ATACGACCAGTGTAAGTGGC+TGG - chr2.3:18155610-18155629 None:intergenic 50.0%
CAAGGTTGCTCCAATTCCAG+GGG + chr2.3:18154816-18154835 MS.gene068781:CDS 50.0%
CAGCACGAAGTAAGGAGAGA+AGG - chr2.3:18156043-18156062 None:intergenic 50.0%
CCCAAGACTGTGATGTAGGA+GGG + chr2.3:18155021-18155040 MS.gene068781:intron 50.0%
CCCTCCTACATCACAGTCTT+GGG - chr2.3:18155024-18155043 None:intergenic 50.0%
CTGACCAACTTCCAGACACT+GGG + chr2.3:18157037-18157056 MS.gene068781:CDS 50.0%
CTGCTTGGGCAACAAAAGGA+TGG + chr2.3:18154114-18154133 MS.gene068781:CDS 50.0%
CTTGCATGGAATGCTAGCGT+TGG - chr2.3:18154164-18154183 None:intergenic 50.0%
CTTTAATGGCAGCAGATGCC+TGG - chr2.3:18156927-18156946 None:intergenic 50.0%
GACTCCCAAGACTGTGATGT+AGG + chr2.3:18155017-18155036 MS.gene068781:intron 50.0%
GAGCGAAACGTTAACCTCTC+CGG + chr2.3:18152003-18152022 MS.gene068781:CDS 50.0%
GCAAGGTTGCTCCAATTCCA+GGG + chr2.3:18154815-18154834 MS.gene068781:CDS 50.0%
GCAGAAGCTGATGAAGCAGA+TGG + chr2.3:18153337-18153356 MS.gene068781:CDS 50.0%
TACGACCAGTGTAAGTGGCT+GGG - chr2.3:18155609-18155628 None:intergenic 50.0%
TCCCAAGACTGTGATGTAGG+AGG + chr2.3:18155020-18155039 MS.gene068781:intron 50.0%
TGACCAACTTCCAGACACTG+GGG + chr2.3:18157038-18157057 MS.gene068781:CDS 50.0%
TGACCCTTACGGTTACGAAC+GGG - chr2.3:18152129-18152148 None:intergenic 50.0%
TGCAAGGTTGCTCCAATTCC+AGG + chr2.3:18154814-18154833 MS.gene068781:CDS 50.0%
TGGATGGATCCTCCTCAGAT+GGG - chr2.3:18157086-18157105 None:intergenic 50.0%
TGGATGGATCCTGCTCAGAT+GGG - chr2.3:18157116-18157135 None:intergenic 50.0%
TTTGCTGCGGTCATAAGGTC+AGG - chr2.3:18156775-18156794 None:intergenic 50.0%
! ACTCAATGGCTTTTCCAGGG+TGG + chr2.3:18156745-18156764 MS.gene068781:intron 50.0%
! AGTGCTTTGGTTTACCGGAG+AGG - chr2.3:18152020-18152039 None:intergenic 50.0%
! CATCCTTTTGTTGCCCAAGC+AGG - chr2.3:18154116-18154135 None:intergenic 50.0%
! GACCGGAGGGAGTATAATTC+TGG - chr2.3:18154607-18154626 None:intergenic 50.0%
! GTGTTGCTAGCCCTTTCCTT+TGG - chr2.3:18152907-18152926 None:intergenic 50.0%
!! ACGATCTGGTTTGATTCGGG+TGG - chr2.3:18152190-18152209 None:intergenic 50.0%
!! TCTGGTTTGATTCGGGTGGA+TGG - chr2.3:18152186-18152205 None:intergenic 50.0%
!! TGCCAGACTTTTGTTTCCCC+TGG - chr2.3:18154835-18154854 None:intergenic 50.0%
ACGTGTTCAGTGTGCGACAC+GGG - chr2.3:18152835-18152854 None:intergenic 55.0%
CAACAGGGTGACACACTACC+TGG - chr2.3:18153462-18153481 None:intergenic 55.0%
CCTTACGGTTACGAACGGGT+CGG - chr2.3:18152125-18152144 None:intergenic 55.0%
CGACCCGTTCGTAACCGTAA+GGG + chr2.3:18152123-18152142 MS.gene068781:CDS 55.0%
CGAGGCAGTTGACCATAACC+AGG + chr2.3:18156906-18156925 MS.gene068781:CDS 55.0%
CGCGGAGGAGGGACAAAAAA+GGG - chr2.3:18156832-18156851 None:intergenic 55.0%
CGGTCTTGGAGTCATTGCTC+CGG - chr2.3:18152056-18152075 None:intergenic 55.0%
CTTACGGTTACGAACGGGTC+GGG - chr2.3:18152124-18152143 None:intergenic 55.0%
CTTGGAGTCATTGCTCCGGT+TGG - chr2.3:18152052-18152071 None:intergenic 55.0%
GACGTGTTCAGTGTGCGACA+CGG - chr2.3:18152836-18152855 None:intergenic 55.0%
GCCCTCCTACATCACAGTCT+TGG - chr2.3:18155025-18155044 None:intergenic 55.0%
GCTGACCAACTTCCAGACAC+TGG + chr2.3:18157036-18157055 MS.gene068781:CDS 55.0%
GTACATCTTGAGACGGCGGA+CGG - chr2.3:18152097-18152116 None:intergenic 55.0%
GTGGATGGATCCTCCTCAGA+TGG - chr2.3:18157087-18157106 None:intergenic 55.0%
GTGGATGGATCCTGCTCAGA+TGG - chr2.3:18157117-18157136 None:intergenic 55.0%
TAAGGTCAGGTTCACCACCC+TGG - chr2.3:18156762-18156781 None:intergenic 55.0%
TCAGATGGGACCTCAGTGGA+TGG - chr2.3:18157102-18157121 None:intergenic 55.0%
TCAGTGTGCGACACGGGTAA+GGG - chr2.3:18152829-18152848 None:intergenic 55.0%
TCGCGGAGGAGGGACAAAAA+AGG - chr2.3:18156833-18156852 None:intergenic 55.0%
TCGGGTGGATGGAAGCTCTT+TGG - chr2.3:18152175-18152194 None:intergenic 55.0%
TGAGGAGGATCCATCCACTG+AGG + chr2.3:18157089-18157108 MS.gene068781:CDS 55.0%
TGGCAGCAGATGCCTGGTTA+TGG - chr2.3:18156921-18156940 None:intergenic 55.0%
TTCAGTGTGCGACACGGGTA+AGG - chr2.3:18152830-18152849 None:intergenic 55.0%
! GTTGTGCTGAAGGGTGTGGT+AGG + chr2.3:18154934-18154953 MS.gene068781:intron 55.0%
! TGACGCAGTACGGAAGCGTA+GGG - chr2.3:18155352-18155371 None:intergenic 55.0%
! TTGGCGTCGTTGGAGTGCTT+TGG - chr2.3:18152033-18152052 None:intergenic 55.0%
AGCACTCCAACGACGCCAAC+CGG + chr2.3:18152034-18152053 MS.gene068781:CDS 60.0%
AGGCTCCTCAGACTCGGACA+AGG - chr2.3:18156863-18156882 None:intergenic 60.0%
ATTGCTCCGGTTGGCGTCGT+TGG - chr2.3:18152043-18152062 None:intergenic 60.0%
CACTGAGGTCCCATCTGAGC+AGG + chr2.3:18157104-18157123 MS.gene068781:CDS 60.0%
CCGACCCGTTCGTAACCGTA+AGG + chr2.3:18152122-18152141 MS.gene068781:CDS 60.0%
CTGCTCAGATGGGACCTCAG+TGG - chr2.3:18157106-18157125 None:intergenic 60.0%
GCTTCCGTACTGCGTCAGAC+TGG + chr2.3:18155355-18155374 MS.gene068781:intron 60.0%
GGATGCCTTGTCCGAGTCTG+AGG + chr2.3:18156855-18156874 MS.gene068781:CDS 60.0%
! CTGACGCAGTACGGAAGCGT+AGG - chr2.3:18155353-18155372 None:intergenic 60.0%
! TCGGACAAGGCATCCTGTCG+CGG - chr2.3:18156850-18156869 None:intergenic 60.0%
! TTTTGTCCCTCCTCCGCGAC+AGG + chr2.3:18156834-18156853 MS.gene068781:CDS 60.0%
AGGCATCCTGTCGCGGAGGA+GGG - chr2.3:18156843-18156862 None:intergenic 65.0%
CATCTTGAGACGGCGGACGG+TGG - chr2.3:18152094-18152113 None:intergenic 65.0%
TGCGGCGGACCATATTGGCG+AGG + chr2.3:18155954-18155973 MS.gene068781:CDS 65.0%
! AAGGCATCCTGTCGCGGAGG+AGG - chr2.3:18156844-18156863 None:intergenic 65.0%
! GACAAGGCATCCTGTCGCGG+AGG - chr2.3:18156847-18156866 None:intergenic 65.0%
CTTGAGACGGCGGACGGTGG+CGG - chr2.3:18152091-18152110 None:intergenic 70.0%
! GGCGGAGCGCTTCTCGGTCT+TGG - chr2.3:18152070-18152089 None:intergenic 70.0%
! GGTGGCGGCGGAGCGCTTCT+CGG - chr2.3:18152076-18152095 None:intergenic 75.0%
!! GAGACGGCGGACGGTGGCGG+CGG - chr2.3:18152088-18152107 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 18151988 18157194 18151988 ID=MS.gene068781
chr2.3 mRNA 18151988 18157194 18151988 ID=MS.gene068781.t1;Parent=MS.gene068781
chr2.3 exon 18151988 18152219 18151988 ID=MS.gene068781.t1.exon1;Parent=MS.gene068781.t1
chr2.3 CDS 18151988 18152219 18151988 ID=cds.MS.gene068781.t1;Parent=MS.gene068781.t1
chr2.3 exon 18152315 18152448 18152315 ID=MS.gene068781.t1.exon2;Parent=MS.gene068781.t1
chr2.3 CDS 18152315 18152448 18152315 ID=cds.MS.gene068781.t1;Parent=MS.gene068781.t1
chr2.3 exon 18152538 18152667 18152538 ID=MS.gene068781.t1.exon3;Parent=MS.gene068781.t1
chr2.3 CDS 18152538 18152667 18152538 ID=cds.MS.gene068781.t1;Parent=MS.gene068781.t1
chr2.3 exon 18153302 18153462 18153302 ID=MS.gene068781.t1.exon4;Parent=MS.gene068781.t1
chr2.3 CDS 18153302 18153462 18153302 ID=cds.MS.gene068781.t1;Parent=MS.gene068781.t1
chr2.3 exon 18153894 18153995 18153894 ID=MS.gene068781.t1.exon5;Parent=MS.gene068781.t1
chr2.3 CDS 18153894 18153995 18153894 ID=cds.MS.gene068781.t1;Parent=MS.gene068781.t1
chr2.3 exon 18154101 18154205 18154101 ID=MS.gene068781.t1.exon6;Parent=MS.gene068781.t1
chr2.3 CDS 18154101 18154205 18154101 ID=cds.MS.gene068781.t1;Parent=MS.gene068781.t1
chr2.3 exon 18154380 18154508 18154380 ID=MS.gene068781.t1.exon7;Parent=MS.gene068781.t1
chr2.3 CDS 18154380 18154508 18154380 ID=cds.MS.gene068781.t1;Parent=MS.gene068781.t1
chr2.3 exon 18154811 18154951 18154811 ID=MS.gene068781.t1.exon8;Parent=MS.gene068781.t1
chr2.3 CDS 18154811 18154951 18154811 ID=cds.MS.gene068781.t1;Parent=MS.gene068781.t1
chr2.3 exon 18155931 18156031 18155931 ID=MS.gene068781.t1.exon9;Parent=MS.gene068781.t1
chr2.3 CDS 18155931 18156031 18155931 ID=cds.MS.gene068781.t1;Parent=MS.gene068781.t1
chr2.3 exon 18156362 18156419 18156362 ID=MS.gene068781.t1.exon10;Parent=MS.gene068781.t1
chr2.3 CDS 18156362 18156419 18156362 ID=cds.MS.gene068781.t1;Parent=MS.gene068781.t1
chr2.3 exon 18156763 18157194 18156763 ID=MS.gene068781.t1.exon11;Parent=MS.gene068781.t1
chr2.3 CDS 18156763 18157194 18156763 ID=cds.MS.gene068781.t1;Parent=MS.gene068781.t1
Gene Sequence

>MS.gene068781

ATGGCGAAGAAGAAAGAGCGAAACGTTAACCTCTCCGGTAAACCAAAGCACTCCAACGACGCCAACCGGAGCAATGACTCCAAGACCGAGAAGCGCTCCGCCGCCACCGTCCGCCGTCTCAAGATGTACAAAACCCGACCCGTTCGTAACCGTAAGGGTCATGTCTTGAGCAACGAGTTTCAATCCAAAGAGCTTCCATCCACCCGAATCAAACCAGATCGTCAATGGTTCGGTATGTTCAATTTCAGGGATTCGATTTTGTTCACTGTGATTCTTCAAATTCAGCTTGTTAATTTTAGGGTTTTGGTTTGTGTTTGTGATTTGTAGGGAATACTCGTGTTGTGAATCAGAAAGAGCTTGAGTTTTTCAGAGAAGAAATGGCGAAGCATAGTGCAAGTAATTACAATATTATTCTTAAGGGGAAGAATTTGCCTATGTCGCTTCTCAATGATTATCAGAAGGTTTGTTTGTTTCTTCGTGAACTGCTTAATTGTTGAAATGATTTGGTGAATTATGTGAATTTATTGGTTTATGGTTGTGAATATTGTAGCAATCGAGGGTTCATCTTCTTGATAGAGAGCCTTTTTCTGATGCATTTGGACCTAAGACTAAAAGAAAGCGACCAAGTCTTTTAGCTTCTGATTATGAGGCTTTAGCTAAGAAAGCTGATGGTTCTCAAGGTAGAAATCTGATTTCGATATAAATTCTGTTTTGTTGTGCTAAAAGATATGTTTTTCTTTAGAAAGTTAAAGATAATCTATGTAGCACGGTCACGTCAATACTGAAAATAATTTGTAAAAGTGACATAATCGAATGTAATCACATGTGTCGTGCTTGACCCTTACCCGTGTCGCACACTGAACACGTCTTAAATCATGAGTGTCAGTACTACAAAGAAAATAATAGTTTCTTAAAACCAAAGGAAAGGGCTAGCAACACTTACTTCAATGCTATTACTTCAAAGGAAAGGGCTAAGCAACACTTCAATGCTATTTTTCCAACCATGAGTCTTTTATTTGGTGAAATTCACGTTGGTTCTACAACTTTATGTTGTTAACACTTCTCTAAAACCAAATTATTTAAGGAAAAACATGAAAGGGGTTTATTTAGCTCATCCATAGGCGTTGTAACTTGGTTACTTGTTTTACATTTGTGTGTTCAGTTTATTTGCTTAATAAAGAATGGTTGATGCAGTTTTCTGTTTCCTTAGTGGGAATACTTGTTGATATATTTGATATGTTTCTTTGACCAAATGATGTTGTTTTTAACCTGATAACTGTTTTTGTGTCTTTCCTACATAACTTTCGTTTGCAGATGCTTTCGAAGAGAAGTATGCTTCTGGTACGGCTGCAGAAGCTGATGAAGCAGATGGATTTAGAGATTTAGTGCGACATACCATGTTTGAGAAGGGTCAAAGCAAACGCATATGGGGTGAACTTTACAAAGTGATAGATTCTTCAGATGTTGTTGTCCAGGTAGTGTGTCACCCTGTTGCTAAAATTTTGTTTAACTCTTCACCTTTCTATGTTGATGGATTGTGACCTGACAAGCATTTATGTGTTTCCATTGTTTTAATATTATTGTGATAATGTTAAAAAATTACGCTTTATGATGTGTATTTCTGCTGCAAATCTGCATGCTATATTGCTCTGTTAATGTGAAGTACGGACATTGTTATGAATTTGAATATAAGTTTGTCATAGTAAAGTAAGGGAAAAAACTAGAAGTTGGGAGCTCAAGCGTTACACTGATAAAGCATTTTTATTTTTCTTAATATGATTGTTTCATGCTTATTTAAGTTGATGAATCCATGGTTGGTCGAATTTGTTTGACTTTTAGATTCGCAGCAGATATCACACACTTTTGTCTTCAAATCTTTGAAAATATTGTATCTGTCCTGATACAGGTTATAGATGCAAGGGATCCACAAGGCACAAGATGTTATCATTTAGAGAAGCATTTGAAAGAAAATTGCAAGCACAAACACATGGTGCTTTTATTGAACAAGGTAAGTAATATCTTTTTTTGCTCTTTTTGTTTTAAATTGTTGCTTGATACCCTTAATTTATTTCTTTACATTATAAATCATTTCAAATCCTCATTCTTTTTGCAGTGCGATCTAATTCCTGCTTGGGCAACAAAAGGATGGCTTAGAGTTTTGTCAAAAGAATATCCAACGCTAGCATTCCATGCAAGTATTAATAAGTCCTTTGGAAAGGTATACTTTTGACTTCATCTTTAGTTGATTTGTTGGCCAATTTCCAGTAATGCGTTAATCAATGAATAAAAAAAGACAAGTGAAGCTGGAGATAATCATCTCCTTTCCTCTCCATTAACACTTGTATACCTTCAGCTATTTGCTATCTTATTTATTGCTCATTATCATGCTTAGGGTTCACTTCTATCGGTTCTAAGACAATTTGCAAGATTGAAAAGTGATAAGCAAGCAATATCTGTTGGTTTTGTTGGATATCCAAATGTTGGGAAGTCATCAGTGATCAACACATTGCGTACAAAGAATGTAATCTTTCTTTTTCCTTCACTGCTTCTTATTTCCTGCTTAAGTTTTAATTTGGAGATGAGTTAAAGCATAGAAGTACAAGTATATTTGCAACTCCAGAATTATACTCCCTCCGGTCACATTTATAAGCAACTTTTGCTTTTTCAAATTCATTAAATATGTGACGTATCTAGATTATATTCTGTTTTAGATACATCACCTATTTAATGAATCTGAACAAGTAAAAGTTGCTTATAAATGTGACCAGAGGGAGTAAGCATTTTAGCAGGTTGATTGACATGTGGCCGATTAATATGTCATAGGTTTGCAAGGTTGCTCCAATTCCAGGGGAAACAAAAGTCTGGCAGTATATTACACTTACAAAGAGGATCTTTTTGATTGATTGTCCAGGAGTTGTCTACCACAACAATGACTCTGAAACAGATGTTGTGCTGAAGGGTGTGGTAGGTTTTCTCTTGTTTCCTTTTTACTTTGGTTGCGTGATACTTCAATAAAGAATATTTTGTTCGACTCCCAAGACTGTGATGTAGGAGGGCTTTCTTAGTAATTTTATAGTATTTTATTTTAACCAAATCTAAATAATTTTCTAGAACTTTCTATTATTATTACGTTTTATTTTATTTTAACCCATGGGTTTGTTATTTCTTTCACTATATAAGCAGAACTTATGTAGCCTAAGAGGCACACTTTTTGATTCATTAATAATATTCGAGACTTTTCTCTCAATTCTGGTGGATTCTGGGAACCCTTATTTTGATAGGTTTGTCGCTTGCAACCCTATTTTCACAAGTTTGTCGCTTGCAAACTTGTTCTTTTCTATCTAGGTTTAGCGCTTGCTAACCCTACGCTTCCGTACTGCGTCAGACTGGATGTGCAAACATAATTTATTTGAATCTGAACGATATTTGAAAGATTACTAAACAATCATGTTGGTTGTAGACCAATCAGCCTTGTGATACATCCTATATTTTTCTGATTTTTGAACTTGTGATATATTATTCATGTGTTGTTTTGGGACTAAGTCCCAGGAAGAGCTATTCTTAGATTTTGTTAGATTTAATATTGACTAGCATATTACCTATGTGGCTGTCATTTTACCCAGCCACTTACACTGGTCGTATATTAAGAATTATTCATGCCCACAGAATATAAATTCATTATATAGTGTATAATATTGTTCCTATTGTAGTGGGGTGGTCATATACTCATATTTTAATGGAATTTAATTTTTTAATTAATATTTGAAATAATATTTTTAAAAGATAAAATAGTAAATAAAATAGTTTAAATGAAGGGTAAAATATGTAAGAAAAATGGCAGCCCAAACCCATGTATGCTCTTTATATCTTTATATATAGTATAAATATAGTATAGATTATTATCGTTGTTGCTGTTGTGGCTTAATACTTTACTTATTTTCAGGTTCGTGTAACAAACTTGAAAGATGCGGCGGACCATATTGGCGAGGTTTTGAAACGTGTGAAGAAGGAGCACTTGACAAGAGCTTATAAAATAAAAGAATGGTATTGTTCCTTCTCTCCTTACTTCGTGCTGAATAGTAGATCTTCATATAGTGTGTCAAACTTTTATATTCTTGTTTTTGCTAAGAACAACATATTATTTAAAAGCTTTTGTTAGATTTTAATTTTTCTTTGCTGTAGTTCAAGCATCTTGTAAGGAATTAGGAACAGTAAGGTGGTGATGATATGATTATTCTTGATGCGACTTTACATGCCATTTATATCGGCCTTGATTTGGTTATCTGTGTATTATTATAGCTTGTTTATAATGTAACAATAGTAGCTTGTATACAAAAACTAGGTATTTAATAATGCCATATATCTTGTCATCAGGGTTGATGAAAATGACTTCCTACTTCAGCTTTGCAAATCATCTGGCAAACTCCTTAAGGTATTCTTTTTGAATTGATCTAAATTCTTACTTTGATATTAAAAAAAAGGTTGTCTAGACTGATCATCAGCTTTATTAGTATACTCTAGCTTTCCTCAATTTGACTTAGACTAGATATGCCCTCTGTGATGGAGCTAAAGAAACACATTTTTCATCTCTTGATCTTCTGCTTGCTTTATAGAAGAAAGCAGTGAACTTCAATTACTAATTTTTCCCTTTATGTTACAGCATGTCAAATCGTTTCATTTAGTTACGCTTCCAATTTGTTTTTCTTGAACTTTTATATTTCTTATGTAAGACAAGGTTACACTTTGATGCGACTTTTACTCAATGGCTTTTCCAGGGTGGTGAACCTGACCTTATGACCGCAGCAAAGATGATACTTCACGATTGGCAGAGGGGTAAAATTCCCTTTTTTGTCCCTCCTCCGCGACAGGATGCCTTGTCCGAGTCTGAGGAGCCTAATGTTAATGGCATAGATGTTGACGAGGCAGTTGACCATAACCAGGCATCTGCTGCCATTAAAGCTATTGCAAATGTTCTTTCGTCCCAGCAGCAAAGAAATGTACCAGTTCAAGGGGATTTATATAACGAGAATGAGCTGAATGAAGAAACTGCTGACCAACTTCCAGACACTGGGGATTATACAGATGAAGATAGTGACCCATCTGAGGAGGATCCATCCACTGAGGTCCCATCTGAGCAGGATCCATCCACTGATGTTCCATCTGAGCAACTTATTTCTGCTGAGCCGGTCCCAACAAGTGAATCATAA
Protein sequence

>MS.gene068781.t1

MAKKKERNVNLSGKPKHSNDANRSNDSKTEKRSAATVRRLKMYKTRPVRNRKGHVLSNEFQSKELPSTRIKPDRQWFGNTRVVNQKELEFFREEMAKHSASNYNIILKGKNLPMSLLNDYQKQSRVHLLDREPFSDAFGPKTKRKRPSLLASDYEALAKKADGSQDAFEEKYASGTAAEADEADGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVIDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKCDLIPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYHNNDSETDVVLKGVVRVTNLKDAADHIGEVLKRVKKEHLTRAYKIKEWVDENDFLLQLCKSSGKLLKGGEPDLMTAAKMILHDWQRGKIPFFVPPPRQDALSESEEPNVNGIDVDEAVDHNQASAAIKAIANVLSSQQQRNVPVQGDLYNENELNEETADQLPDTGDYTDEDSDPSEEDPSTEVPSEQDPSTDVPSEQLISAEPVPTSES