AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene04159


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene04159.t1 MTR_3g460700 94.809 655 32 1 1 653 1 655 0.0 1123
MS.gene04159.t1 MTR_5g096020 36.864 236 114 8 289 513 316 527 7.45e-27 115
MS.gene04159.t1 MTR_3g086950 32.105 190 103 5 294 461 159 344 8.64e-20 94.7
MS.gene04159.t1 MTR_8g089980 30.415 217 119 6 294 482 166 378 5.81e-18 89.0
MS.gene04159.t1 MTR_3g104760 34.078 179 105 4 289 459 224 397 8.72e-17 84.3
MS.gene04159.t1 MTR_5g091110 34.014 147 79 7 377 511 459 599 1.31e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene04159.t1 AT4G26600 61.156 623 181 12 51 645 77 666 0.0 719
MS.gene04159.t1 AT4G26600 62.437 591 152 9 51 594 77 644 0.0 716
MS.gene04159.t1 AT4G26600 58.118 659 174 13 51 645 77 697 0.0 702
MS.gene04159.t1 AT4G26600 70.431 487 99 5 51 511 77 544 0.0 697
MS.gene04159.t1 AT4G26600 66.216 518 99 6 51 511 77 575 0.0 679
MS.gene04159.t1 AT5G55920 64.673 535 151 8 36 549 84 601 0.0 657
MS.gene04159.t1 AT4G26600 69.316 453 94 5 51 477 77 510 0.0 627
MS.gene04159.t1 AT4G26600 64.876 484 94 6 51 477 77 541 0.0 609
MS.gene04159.t1 AT4G26600 64.876 484 94 6 51 477 77 541 0.0 609
MS.gene04159.t1 AT3G13180 37.607 234 115 8 289 513 310 521 7.31e-27 115
MS.gene04159.t1 AT5G26180 32.549 255 126 9 289 518 284 517 1.68e-17 86.7
MS.gene04159.t1 AT5G26180 32.549 255 126 9 289 518 284 517 1.68e-17 86.7
MS.gene04159.t1 AT5G26180 32.549 255 126 9 289 518 284 517 1.68e-17 86.7
MS.gene04159.t1 AT5G26180 32.549 255 126 9 289 518 284 517 1.68e-17 86.7
MS.gene04159.t1 AT5G26180 32.549 255 126 9 289 518 284 517 1.68e-17 86.7
MS.gene04159.t1 AT4G17590 37.500 144 49 3 278 419 37 141 3.00e-17 80.9
MS.gene04159.t1 AT4G17590 51.087 92 43 2 330 419 50 141 3.35e-17 80.9
MS.gene04159.t1 AT2G22400 29.016 193 108 4 294 461 170 358 2.13e-16 84.0
MS.gene04159.t1 AT4G40000 28.017 232 119 6 288 482 157 377 1.21e-15 81.3

Find 146 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCCTCTTCTTGGATTC+AGG 0.141190 3.1:+45038722 None:intergenic
TTCTTCCTCTTCTTGGATTC+AGG 0.141190 3.1:+45038806 None:intergenic
TTCGGTTGATAGGGTATTAT+TGG 0.174197 3.1:-45041516 MS.gene04159:CDS
TTTATCTTTCTTCCTCTTCT+TGG 0.176574 3.1:+45038799 None:intergenic
TTTATCTTTCTTCCTCTTCT+TGG 0.194086 3.1:+45038715 None:intergenic
TCTGAGGACAAACACTTTAA+AGG 0.206092 3.1:-45044628 MS.gene04159:intron
TCTGATGTTGCAGCAGGTTT+TGG 0.227277 3.1:+45038923 None:intergenic
TTGTCTCAATGCCTTAAAAT+TGG 0.229426 3.1:+45044931 None:intergenic
CATCAGGTTTACAAAGTTTA+GGG 0.256825 3.1:-45039618 MS.gene04159:intron
CCATCAGGTTTACAAAGTTT+AGG 0.267763 3.1:-45039619 MS.gene04159:intron
AGTAATGGCGTTAAAGAAAA+TGG 0.281883 3.1:-45038845 MS.gene04159:CDS
AAAGGTTCGGATTTGGAATC+TGG 0.294908 3.1:-45046079 MS.gene04159:CDS
GTAGATTCTTATTCTAAATC+TGG 0.304253 3.1:-45039928 MS.gene04159:CDS
GATGCCCCTTGCAGTGGAAC+TGG 0.328800 3.1:-45041494 MS.gene04159:CDS
CTGTGGTGCTTCTTCTTCTT+CGG 0.343034 3.1:+45046298 None:intergenic
CTCTGTAGATTGGAAAGATC+TGG 0.349370 3.1:+45045087 None:intergenic
AAAGGAGAGGATTGTTGATA+TGG 0.355005 3.1:-45044119 MS.gene04159:CDS
TGTAGAGAAAGGTTCGGATT+TGG 0.356297 3.1:-45046086 MS.gene04159:intron
TGAGGTTTGACTGGCTTTGA+AGG 0.357083 3.1:+45046377 None:intergenic
TTTGGAATCTGGGTCGGGTT+CGG 0.358369 3.1:-45046068 MS.gene04159:CDS
TCAGACACGAAGACGGGATT+TGG 0.362771 3.1:-45044512 MS.gene04159:intron
TAATATTCAGACTAATATTC+AGG 0.369013 3.1:-45045936 MS.gene04159:CDS
GTGTTTGTCCTCAGACATAT+AGG 0.370494 3.1:+45044636 None:intergenic
TTTAATCCTCCTCTGTAGAT+TGG 0.371683 3.1:+45045077 None:intergenic
TTCTTAGTTGCTGGCGCCAT+TGG 0.375256 3.1:+45046404 None:intergenic
TGGGTTTCAATTCGGTTGAT+AGG 0.382919 3.1:-45041526 MS.gene04159:CDS
ACTGATATACGTTCATACTA+TGG 0.384454 3.1:-45044869 MS.gene04159:CDS
GAAGTGGAATCATCTTTGAT+TGG 0.387438 3.1:+45046326 None:intergenic
CCTCAGTACTCTCATATTGA+TGG 0.389305 3.1:+45038343 None:intergenic
GATAAACAGAGGAGTAAATC+TGG 0.389989 3.1:-45044479 MS.gene04159:CDS
TTTGAAATCTCCTCTCTAGA+TGG 0.396292 3.1:+45038608 None:intergenic
GTTCCTTGTGGACTTGACTT+TGG 0.402894 3.1:-45039721 MS.gene04159:CDS
GTTTACATTACCAACTAAAC+AGG 0.421721 3.1:-45045900 MS.gene04159:intron
GAATTGAAACCCAAAACCTT+TGG 0.426716 3.1:+45041536 None:intergenic
CGTCTTGTCTTATCTAATGA+AGG 0.426921 3.1:+45039581 None:intergenic
CTATCCACACGTGCACAATA+TGG 0.427197 3.1:-45039555 MS.gene04159:CDS
TTCAGAAGCTTCTTTGACAT+TGG 0.432223 3.1:+45038745 None:intergenic
AGCACCACAGCTACAACATC+TGG 0.432748 3.1:-45046285 MS.gene04159:CDS
TACCTCCTTCCCATCATAGT+TGG 0.435058 3.1:+45042161 None:intergenic
GTTTCTAATCGGTGCTTTAG+TGG 0.444849 3.1:-45044837 MS.gene04159:CDS
AATATCTTCCTCACCCGATT+CGG 0.446920 3.1:+45046030 None:intergenic
AGTTCCATCAGTTCAACAAC+TGG 0.448756 3.1:+45044684 None:intergenic
GATTCTGACTTATCTTCTGA+TGG 0.450798 3.1:-45046248 MS.gene04159:CDS
GGACTTGACTTTGGACGTCC+AGG 0.457743 3.1:-45039712 MS.gene04159:CDS
TACTCTGGAGTGGCACCAAT+TGG 0.459895 3.1:+45044301 None:intergenic
ATCTGGGTCGGGTTCGGATG+AGG 0.459933 3.1:-45046062 MS.gene04159:CDS
GGCTACAATGAGTTTCTAAT+CGG 0.460424 3.1:-45044848 MS.gene04159:CDS
TTTAAGGCATTGAGACAAGA+TGG 0.462197 3.1:-45044926 MS.gene04159:CDS
GAGGATAATGATTCCGAATC+GGG 0.464701 3.1:-45046043 MS.gene04159:CDS
TCCTCAAAACCAAGTAATGA+TGG 0.465110 3.1:-45038689 MS.gene04159:CDS
TTATTGATTATGTGCTCAAA+AGG 0.465368 3.1:-45039759 MS.gene04159:CDS
GGGTTTCAATTCGGTTGATA+GGG 0.465722 3.1:-45041525 MS.gene04159:CDS
GAGAGGAGATTTCAAAAGCC+AGG 0.469096 3.1:-45038601 MS.gene04159:intron
ATATTCTACATGCTCAATCA+TGG 0.469509 3.1:-45039893 MS.gene04159:CDS
AGTCAAAACTTCAAAGAACT+TGG 0.472179 3.1:-45041365 MS.gene04159:CDS
ATCTGGATCCTCTCAGCAAA+TGG 0.472293 3.1:-45044462 MS.gene04159:CDS
GTGTGTTGCAGGGCTGCACC+TGG 0.473485 3.1:-45043036 MS.gene04159:intron
TTCGGATTTGGAATCTGGGT+CGG 0.473665 3.1:-45046074 MS.gene04159:CDS
AATGTTTCTGATGTTGCAGC+AGG 0.475408 3.1:+45038917 None:intergenic
GGCCTTGGCTCCTCAAGAAA+AGG 0.475814 3.1:-45044137 MS.gene04159:CDS
ACTGTAGTCTCCAACTATGA+TGG 0.476886 3.1:-45042171 MS.gene04159:CDS
TCGGATTTGGAATCTGGGTC+GGG 0.478990 3.1:-45046073 MS.gene04159:CDS
ATGCCCCTTGCAGTGGAACT+GGG 0.480681 3.1:-45041493 MS.gene04159:CDS
CAGGTCATGCCACTGACTCC+AGG 0.481488 3.1:+45038297 None:intergenic
CTAAACCCAAGAGGGTGAAA+AGG 0.481984 3.1:-45038637 MS.gene04159:CDS
AACATCAGAAACATTTGAAA+AGG 0.487097 3.1:-45038909 MS.gene04159:CDS
TAGATTCTTATTCTAAATCT+GGG 0.488118 3.1:-45039927 MS.gene04159:CDS
TATGATTCTCAAGTACCAAT+TGG 0.495877 3.1:-45044316 MS.gene04159:CDS
TCAAGGAAGCGATGAGGAAG+AGG 0.504491 3.1:-45046198 MS.gene04159:CDS
CAAAAGGAGGGATGTAAAGC+TGG 0.505302 3.1:-45039743 MS.gene04159:CDS
TGAGGATAATGATTCCGAAT+CGG 0.508749 3.1:-45046044 MS.gene04159:CDS
TGGTGCCACTCCAGAGTACA+TGG 0.514375 3.1:-45044296 MS.gene04159:CDS
TCTGTAGATTGGAAAGATCT+GGG 0.515115 3.1:+45045088 None:intergenic
CCACACGTGCACAATATGGA+TGG 0.515580 3.1:-45039551 MS.gene04159:CDS
ATCGTCGTCCATCACAAGCT+CGG 0.519650 3.1:+45038874 None:intergenic
TTACCCCAGTTCCACTGCAA+GGG 0.525320 3.1:+45041489 None:intergenic
GTTTCCAGTTGTTGAACTGA+TGG 0.525793 3.1:-45044688 MS.gene04159:CDS
TTCTTCTTCGGATTCAGAAG+TGG 0.526045 3.1:+45046310 None:intergenic
TGTTTGTCCTCAGACATATA+GGG 0.528752 3.1:+45044637 None:intergenic
AACGTATATCAGTCTTAAGC+TGG 0.530381 3.1:+45044879 None:intergenic
TTAAGGCATTGAGACAAGAT+GGG 0.536152 3.1:-45044925 MS.gene04159:CDS
GCCACTCCAGAGTACATGGC+TGG 0.537318 3.1:-45044292 MS.gene04159:CDS
TGAGGAGCCAAGGCCATCAC+AGG 0.543882 3.1:+45044145 None:intergenic
CTGTAGTCTCCAACTATGAT+GGG 0.544758 3.1:-45042170 MS.gene04159:CDS
CTGAACCTGAATCCAAGAAG+AGG 0.544878 3.1:-45038811 MS.gene04159:CDS
GTCCTCAGACATATAGGGCG+AGG 0.545103 3.1:+45044642 None:intergenic
CTTACCCCAGTTCCACTGCA+AGG 0.552805 3.1:+45041488 None:intergenic
CGGGTGAGGAAGATATTGCT+AGG 0.555784 3.1:-45046024 MS.gene04159:CDS
GACTGCGAATCTGCATAGGA+TGG 0.558093 3.1:-45042205 MS.gene04159:CDS
TTGATTATGTGCTCAAAAGG+AGG 0.564759 3.1:-45039756 MS.gene04159:CDS
AAGGTTCGGATTTGGAATCT+GGG 0.565347 3.1:-45046078 MS.gene04159:CDS
ACAAGATGGGGCGACGAGGA+AGG 0.566211 3.1:-45044912 MS.gene04159:CDS
ATCTTTCCAATCTACAGAGG+AGG 0.568522 3.1:-45045083 MS.gene04159:CDS
TTATTGGATGCCCCTTGCAG+TGG 0.570741 3.1:-45041500 MS.gene04159:CDS
TCCTCTCAGCAAATGGTCAA+AGG 0.571847 3.1:-45044455 MS.gene04159:intron
CTGAACCTGAATCCAAGAAG+AGG 0.571854 3.1:-45038727 MS.gene04159:CDS
GAAATCTCCTCTCTAGATGG+AGG 0.572729 3.1:+45038611 None:intergenic
ATGCTCAATCATGGTTGCTG+AGG 0.573386 3.1:-45039884 MS.gene04159:intron
TGATTATGTGCTCAAAAGGA+GGG 0.573793 3.1:-45039755 MS.gene04159:CDS
AAAAGAAACCGAGCTTGTGA+TGG 0.579579 3.1:-45038882 MS.gene04159:CDS
TAATGATTCCGAATCGGGTG+AGG 0.580992 3.1:-45046038 MS.gene04159:CDS
CCATCCATATTGTGCACGTG+TGG 0.586835 3.1:+45039551 None:intergenic
CTCTGACTGCGAATCTGCAT+AGG 0.587603 3.1:-45042209 MS.gene04159:CDS
TACCCCAGTTCCACTGCAAG+GGG 0.588973 3.1:+45041490 None:intergenic
TCTAATCGGTGCTTTAGTGG+AGG 0.590337 3.1:-45044834 MS.gene04159:intron
GACTTGACTTTGGACGTCCA+GGG 0.591090 3.1:-45039711 MS.gene04159:intron
AGGTCATGCCACTGACTCCA+GGG 0.595295 3.1:+45038298 None:intergenic
AGATTCTTATTCTAAATCTG+GGG 0.596204 3.1:-45039926 MS.gene04159:CDS
GTCTTGTCTTATCTAATGAA+GGG 0.597739 3.1:+45039582 None:intergenic
ACCTTTGACCATTTGCTGAG+AGG 0.598958 3.1:+45044454 None:intergenic
TTCTGAAACTAAACCCAAGA+GGG 0.600404 3.1:-45038645 MS.gene04159:CDS
CCTCCTTGCTGCAATTGACA+TGG 0.600480 3.1:-45039950 MS.gene04159:CDS
CACACGTGCACAATATGGAT+GGG 0.603697 3.1:-45039550 MS.gene04159:CDS
CTGTAGATTGGAAAGATCTG+GGG 0.607533 3.1:+45045089 None:intergenic
AAGGAAACCTCCATCTAGAG+AGG 0.609307 3.1:-45038618 MS.gene04159:CDS
AGAATGTACCCTGGAGTCAG+TGG 0.610241 3.1:-45038306 MS.gene04159:CDS
AGTCTCCAACTATGATGGGA+AGG 0.613258 3.1:-45042166 MS.gene04159:CDS
AATATAATCAGACACGAAGA+CGG 0.613258 3.1:-45044519 MS.gene04159:intron
CCTTAAAATTGGAAAGAACA+CGG 0.614100 3.1:+45044942 None:intergenic
GATTCTTATTCTAAATCTGG+GGG 0.619452 3.1:-45039925 MS.gene04159:CDS
ATATAATCAGACACGAAGAC+GGG 0.619823 3.1:-45044518 MS.gene04159:intron
GAAATGTGCTCATCTACAGA+AGG 0.622193 3.1:-45041332 MS.gene04159:intron
GCTGCTCTAATGAAGAACTC+AGG 0.623997 3.1:-45042994 MS.gene04159:intron
CGTCCAAAGTCAAGTCCACA+AGG 0.626833 3.1:+45039718 None:intergenic
TAAGGCATTGAGACAAGATG+GGG 0.628379 3.1:-45044924 MS.gene04159:CDS
ACTGCGAATCTGCATAGGAT+GGG 0.632620 3.1:-45042204 MS.gene04159:CDS
GACGACGATAAACCTAGTAA+TGG 0.633395 3.1:-45038860 MS.gene04159:CDS
GCAGATGTCTTGATAAACAG+AGG 0.637521 3.1:-45044490 MS.gene04159:CDS
TGGCTCCTCAAGAAAAGGAG+AGG 0.638199 3.1:-45044132 MS.gene04159:CDS
CTCCAACTATGATGGGAAGG+AGG 0.639968 3.1:-45042163 MS.gene04159:intron
TGTTGCAGGGCTGCACCTGG+TGG 0.642429 3.1:-45043033 MS.gene04159:intron
AGCCTCGCCCTATATGTCTG+AGG 0.651744 3.1:-45044644 MS.gene04159:CDS
CTACAACATCTGGAACTCGA+TGG 0.653497 3.1:-45046275 MS.gene04159:CDS
GATGTAAAGCTGGTTCCTTG+TGG 0.654189 3.1:-45039733 MS.gene04159:CDS
ACCAGCCATGTACTCTGGAG+TGG 0.663459 3.1:+45044291 None:intergenic
TGTAGATTGGAAAGATCTGG+GGG 0.664052 3.1:+45045090 None:intergenic
AGTTCCAGATGTTGTAGCTG+TGG 0.664327 3.1:+45046281 None:intergenic
TGAGACAAGATGGGGCGACG+AGG 0.665072 3.1:-45044916 MS.gene04159:CDS
CTTCTGAAACTAAACCCAAG+AGG 0.669702 3.1:-45038646 MS.gene04159:CDS
TGCCCCTTGCAGTGGAACTG+GGG 0.672170 3.1:-45041492 MS.gene04159:intron
CAGATCTTTCCAATCTACAG+AGG 0.679656 3.1:-45045086 MS.gene04159:CDS
CATGTCGAAAGAATGTACCC+TGG 0.682275 3.1:-45038315 MS.gene04159:CDS
CCATGTCAATTGCAGCAAGG+AGG 0.684930 3.1:+45039950 None:intergenic
CTACCATGTCAATTGCAGCA+AGG 0.696246 3.1:+45039947 None:intergenic
GAGGAAGACGAAGACAACGA+AGG 0.735414 3.1:-45046179 MS.gene04159:intron
CCATCAATATGAGAGTACTG+AGG 0.742756 3.1:-45038343 MS.gene04159:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr3.1 gene 45038301 45046423 45038301 ID=MS.gene04159
chr3.1 mRNA 45038301 45046423 45038301 ID=MS.gene04159.t1;Parent=MS.gene04159
chr3.1 exon 45046180 45046423 45046180 ID=MS.gene04159.t1.exon1;Parent=MS.gene04159.t1
chr3.1 CDS 45046180 45046423 45046180 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
chr3.1 exon 45045901 45046103 45045901 ID=MS.gene04159.t1.exon2;Parent=MS.gene04159.t1
chr3.1 CDS 45045901 45046103 45045901 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
chr3.1 exon 45045073 45045136 45045073 ID=MS.gene04159.t1.exon3;Parent=MS.gene04159.t1
chr3.1 CDS 45045073 45045136 45045073 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
chr3.1 exon 45044835 45044968 45044835 ID=MS.gene04159.t1.exon4;Parent=MS.gene04159.t1
chr3.1 CDS 45044835 45044968 45044835 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
chr3.1 exon 45044629 45044712 45044629 ID=MS.gene04159.t1.exon5;Parent=MS.gene04159.t1
chr3.1 CDS 45044629 45044712 45044629 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
chr3.1 exon 45044456 45044530 45044456 ID=MS.gene04159.t1.exon6;Parent=MS.gene04159.t1
chr3.1 CDS 45044456 45044530 45044456 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
chr3.1 exon 45044282 45044353 45044282 ID=MS.gene04159.t1.exon7;Parent=MS.gene04159.t1
chr3.1 CDS 45044282 45044353 45044282 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
chr3.1 exon 45044118 45044191 45044118 ID=MS.gene04159.t1.exon8;Parent=MS.gene04159.t1
chr3.1 CDS 45044118 45044191 45044118 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
chr3.1 exon 45042995 45043047 45042995 ID=MS.gene04159.t1.exon9;Parent=MS.gene04159.t1
chr3.1 CDS 45042995 45043047 45042995 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
chr3.1 exon 45042164 45042273 45042164 ID=MS.gene04159.t1.exon10;Parent=MS.gene04159.t1
chr3.1 CDS 45042164 45042273 45042164 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
chr3.1 exon 45041493 45041561 45041493 ID=MS.gene04159.t1.exon11;Parent=MS.gene04159.t1
chr3.1 CDS 45041493 45041561 45041493 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
chr3.1 exon 45041333 45041407 45041333 ID=MS.gene04159.t1.exon12;Parent=MS.gene04159.t1
chr3.1 CDS 45041333 45041407 45041333 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
chr3.1 exon 45039885 45039977 45039885 ID=MS.gene04159.t1.exon13;Parent=MS.gene04159.t1
chr3.1 CDS 45039885 45039977 45039885 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
chr3.1 exon 45039712 45039791 45039712 ID=MS.gene04159.t1.exon14;Parent=MS.gene04159.t1
chr3.1 CDS 45039712 45039791 45039712 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
chr3.1 exon 45039535 45039634 45039535 ID=MS.gene04159.t1.exon15;Parent=MS.gene04159.t1
chr3.1 CDS 45039535 45039634 45039535 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
chr3.1 exon 45038602 45038963 45038602 ID=MS.gene04159.t1.exon16;Parent=MS.gene04159.t1
chr3.1 CDS 45038602 45038963 45038602 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
chr3.1 exon 45038464 45038507 45038464 ID=MS.gene04159.t1.exon17;Parent=MS.gene04159.t1
chr3.1 CDS 45038464 45038507 45038464 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
chr3.1 exon 45038301 45038380 45038301 ID=MS.gene04159.t1.exon18;Parent=MS.gene04159.t1
chr3.1 CDS 45038301 45038380 45038301 ID=cds.MS.gene04159.t1;Parent=MS.gene04159.t1
Gene Sequence

>MS.gene04159

ATGGCGCCAGCAACTAAGAAAAAACCTTCAAAGCCAGTCAAACCTCAAAAAGCCCCAAAAAAAGTTCAAATTGTTCCAATCAAAGATGATTCCACTTCTGAATCCGAAGAAGAAGAAGCACCACAGCTACAACATCTGGAACTCGATGGTTCTGATTCTGACTTATCTTCTGATGGTGATGATCAATTAGCTGATGATTTTCTTCAAGGAAGCGATGAGGAAGAGGAAGACGAAGACAACGAAGGTGTGTATTCTTTCTTGTATATGCTTCTGCAGATATTCCATTTTCGTGTTTTGATGATTGTGTTTATGTTTTGTAGAGAAAGGTTCGGATTTGGAATCTGGGTCGGGTTCGGATGAGGATAATGATTCCGAATCGGGTGAGGAAGATATTGCTAGGAAGTCTAAACTTATTGATAAAAAAAGGGAGAGAGATAGTCAGGCAGCTGCAGATGATTTGCAGACTAATATTCAGACTAATATTCAGGATGAGTCTGATGAGTTTACATTACCAACTAAACAGGTTTCTTTTTTATTTTTTTAAATTTTTTGATTTTGAATGTATGTTATGACTGTTATTGTGTTATGGGTTTTACTTAAATTATTAGAAAATTAGTAAATTTAATTATTAGTTTGTAGTGAAAGTTGCAATCCAATACAAAAGCCAATTTTTTTTCCGACAGTATGTTTGTCTTAGAGTTATTTGAGCTTATCTATTGTCATAAGTTTTGTGAAGAACTTAAGAAAACAGGTTATGGCATTGTTCATAAGCTGTTTTCAACTTATTTTTAGGGCCGTTTGAATAGTTTATGAAAAAACAGCTTATGAAGATACAACTTAGGTCAGTGAGAACTTATGAATTAACATAAAACCTTATTTATTTGTATAAGCTATTTTTCATAAGCTAACAAATAAGTCAATCCAAACTGACCCTAATAAGTTCTCCAAGATAGCTTATGAAAACAACTTATAGCTCATACAAAAAAAATTAACTTTATTATCTTTAATTATAGAAATAACTTATACATAAGTGCTTATCATGATAACCACTTTGGCTATAAGATGCAAATAAGCTGATTAGACCAACATGGCCCGAGTCAAAGTCAATTCTGTTTCAAGGTTATCAAACAAGCTAAAATCAAATTTATATTGAAGAAAATCAGTTTTGACATCGGTTACTGTATACTTGAACATTGCTTATCTTAACAAATGTGAAATCTATTGAACTTGGATTTTTACATTTAATGTTGTAATGTGTGGTAAAAATGGTCATCTTTTAACTTTTAGGAACTTGAGGAAGAGGCTTTGCGTCCCCCAGATCTTTCCAATCTACAGAGGAGGATTAAAGACAGTAAGTTTAACTTTCTCTGTCAATTGACTGTGACTGTTGTTGTTAACAGTTTTCGAGTTGTTTTTTGAGTTGTTGAAATTGTTTAATTGTTTTTGTTTTTCCAGTTGTCCGTGTTCTTTCCAATTTTAAGGCATTGAGACAAGATGGGGCGACGAGGAAGGATTATGTTGACCAGCTTAAGACTGATATACGTTCATACTATGGCTACAATGAGTTTCTAATCGGTGCTTTAGTGGAGGTGTGGATAATTATGATATTAGGACCTCTGCTTTGAACTTTAATTTTATTGATCACCCCATCCTGTTTTTAAATACCTCTAGGTTCTGCTTAGCATTAAAGTTGTATTTTCTTTTGTCGCAGATGTTTCCAGTTGTTGAACTGATGGAACTGATTGAAGCCTTTGAAAAGCCTCGCCCTATATGTCTGAGGACAAACACTTTAAAGGTTGCATGTCTATTTCTGTCACTTTGGGTTGATTTCTTAATGTGAACTTATCCATGTTTCCGATTGAGCTTCTATATTTTTCTTTTGAATATAATCAGACACGAAGACGGGATTTGGCAGATGTCTTGATAAACAGAGGAGTAAATCTGGATCCTCTCAGCAAATGGTCAAAGGTAGGTTTTTATATGTCTCTGTTGGCTTTCCTTCATCTTTCTTATGTTACATGAATCCAAGTAACAGTTTCTAATACCAGATAAATTTGTTTCTATGCAAAGGTTGGACTTGTAGTGTATGATTCTCAAGTACCAATTGGTGCCACTCCAGAGTACATGGCTGGTTTTTACATGGTAGGTGTTTTTCTGCCGTCGTAGTTCTTTATTGTATTTCTTTTAATATTACACATTACACTTAGTACTGTTTTTGTTTTTAACTTGCAGCTTCAAAGTGCTAGTTCTTTTCTGCCTGTGATGGCCTTGGCTCCTCAAGAAAAGGAGAGGATTGTTGATATGGCGTAAGTGATAATTCTTTGCTTGCTATAAATCCAAGCTGTGTCCAAATGTTAGAGAACCTATATCAGTTTTCTATGTGATTTTGAACCAGTCATACAAATTCTCCATGGTGTTCTCAGCTATTGGTATTCTGTGTGCCCATGACAATTTACTGTTTCATACTAGAATTATACTCGTGCAAGTATGCAACTTTTTTTATGCATGTTTTCTGACAAATTAAACAAGAAAAAGGCTTACCTTAAACGTCTTTAGGATAAGTATACCTTGGTAAATCATCTCTTGAATAACTGCCTCTTTCTCTTTGTTACAATACAATTTTTGACATTTTACCGATGTCCATGGAAATTGACTCAAGCTTCACTTGTCTTGCTTGTTGCGTGTATTCAAGCTTGCCGTTGTGCAGTATCCCTTTTAGATGGATGGCCTGCTGCAAGTATGAAATGTTGTGCGCTGTTGGTCCTTTTGAAAAAAGTTAAAAAGAAATAATAATAATTGGTGGCAGCTATTTGATTCAAAATTCTAAATTACTCCCTCCGTCCCTTAATGTAACCTCCCTTTACTTTTTTCACATTTCTTAAGAAAAGCTGTCAGTGTAATTATTATGTCTGTTTTGTGTGTTAATATTACCATATTATCCTTTGTTTGTATATGTATTAAATTTGACTTTTTAAATTTCAAGATAAGTTAGTAGTATTAATTAGGGGTATGTTTAGGAAAATAATAATAAATGAATCTAGTAATTTGAAAAGGGGTTTAGATTTAGGGCCAAAAATAAAGTCAAATGGGTGGTTAGATATAGGGACGGAGGGAGTAGTATTTAAGGGTTATAACCCTTAGTTCCGTTTGAGTTTTAACCTTTTGCCACGACCTATTACTTATTAGGCTGCCCTTATAACCAGTTCTGCTCTTGTCCAATGAGAACGCTTTCTGTTCATGAGTTCATGAGTTTTGTCAAAATACACATGGAGATTTGGAAGATGTAATTTTTTAATGCAAGCTCTTCTTGAACATGGTTTTTTTCTTGCAATATATATCTTTTATCATGGTCAAGACATTTTTATGTGTGTTGCAGGGCTGCACCTGGTGGTAAAACAACTTACATTGCTGCTCTAATGAAGAACTCAGGTATATATATTATTTTATCAGTTTCTTGTGCATTACATGATGCATATTAATTTTTCGCACATAAAAGATTATAAAGCCATAGCAGCGTAGCACTGCTTCATATTTATTTAGCCATTATTGTGGAAGGATACTATATTATTTCTCTAATGTATGCTTGAACTACAATTTACAAAAAAAATTCATAAATCTTATAATCAAGCCCCTTTTGCAAAAGTGCAGCTTCTTTTTTGTTTTTGTTCTTCATTTTAAACAATATTCGTGCTTCCTTCTGTATTTTAAACAATATTCGTGCTTCCTTCTGTTTTCAAAATTGAATCACTTAAATTATACGTAATTATTTGCATCAAGAGGAGCCAGACATTATAGTTCATATTGGGTTGTAGTTCTATTACAGGTCTCAGTTTGAACTTTCAACTAGTAGAGGTGCTTTCTCTGCATAGTAGTAGGTCGTGTTGTGCTATAGCTCTACTCATTAGTGCATAAGTACGCTTTCAGCATCACCTTGGGTCATTCTTATCAAGTTGTGATGCTATAAAAAAAAAAAATTTTAAATCCTTGAACTTAAAGTTTGTGCATATTCCTCCATAAGGTATTATTACTAGCTTGTGTGATCTAAGAATTTGAGTTTTAACTAATTGACTATCATTTGTGTGATCTAAGAATTACTAGTTTGTTAGTAGTTTTATGATTTGAGTAATCAGTTGTTATTTTTTTATCGCAGGAATAATTTTTGCAAATGAAATGAAGGTGCCACGACTAAAATCTCTGACTGCGAATCTGCATAGGATGGGTGTATCGAACACTGTAGTCTCCAACTATGATGGGAAGGAGGTAAGCATCTTTTTTCCACATTAATCTCTGACTCCACTGCTGTTAGATTATATTTCCACACTGTTTGGTTTTCTATTTGACCATCTAGCTCTCTGTCGTACTTATAATTGTTCAGTTTGCAAATTATTCTATGCTTTGTTTACACATTTTTGCTGGACAGAAAACCGAGTCTTCTTTTAATAAGCGAATCATTGACATTATAATCTACTTTATGTACTGGGAGATTTATTTGTTACAAGAAAGAATGCTACTGTAAGATGCCGGGGGCTGCATTTAGATGATAAGCCCTTGTTTTATTATATTAAAAATGGTCCTTTTTGTCATTATACAAAATGGTTGTGATCACAGCAGGCTTGCGAACCTGTACTTGTATATACTTAACACTGGAAAATTACTCCCTTCTGGTCACATTAGTTTCTTAACGAATGTCCATTTTGTAATTATTATCATGTTCTATTGTGGTTTTTTCCTGGTATAGATATACGTGAGCATATTAATTCTGCACCAGTGATTCAAGTAGCTCCCATTTTCAGTCGTATAATGATCTTGCATGTGCCCACAACACCTAGCTTATTGTTTACATTTATGCTTTTATTTTTCAGCTTCCAAAGGTTTTGGGTTTCAATTCGGTTGATAGGGTATTATTGGATGCCCCTTGCAGTGGAACTGGGGTAAGAAATTGTGAATAAAATCAAGATTTTTAGTATTTCTTGTCTATGTTTATGTTCAAGGCACTTAAACCGTTTGTGTCTGCAGGTTATATCCAAAGATGAGTCAGTCAAAACTTCAAAGAACTTGGAAGATATAAAGAAATGTGCTCATCTACAGAAGGTAAAATCAAGGTTTTGTTTGGGACTATGAGAGGAATAACATATGTATCTTATTTATACGCATTGAGGGTATTCATTTAGCTTTTCATCCTAGTGTAACAGTTCCTTGAATTCAATTAATTTCTTTAAAATTGTTTTGTCTTGACTAGGGCTGGACATTCGGTCGGTTTGGGTCGAAATCGGGCCCAAAACCTAAATCCGAACAAGCCCACGGATGGAAACCATAAACCCAATTCCGACTGTTTTCACTTTCGGTTAAGTCGGATTCGGATTAATCGGTTTACGCGGTTGCACGGTGGTTCCGTTCGGTTTCAAACAGCAGAAGAAGAACAAGAGCTTATAAAATTTCAAATGTTTCCTTACATTTCACACATAACATAAGAACAATATCATGCTTCTCATATCTTTGTAGTAACAAATCTAGAGCTGAAATCACAATATCAATGGAGTTTGAATCCCAAGAGCTTTAGTTTGCTGCTTTTACACACTATTAGATCTGGAATCTGTCAATGTCGAAGACGCAGTTAGGGAGACGAAGGAAGCTTGATCTAAAGAAAGATGAATTAAAGATATAAGAAGAAAGGAGTTTTTTTTTACAAAAAAAGTAGCAACAAGGGAGGTGATCCGAACAGTAAAAAGGAAAGAAATTAGAGAGAGAAGACTATTTCAGAATTAAGGAAGAAGAAGAATCTAAAACGATAAATGAAAAGAATTTTTTAACAAACTAAATGAAAGTAGTTATTAATATTAATTTAATACTATTAATTTTGTTATTGTTATTGAAGAAAGAGAGGAATCTTGTAGGCTTTGGATAGGTTACAGTTGGTCTACATACCACTTTTTGATAGAAGCTGTTCTACATACATAAAATGAATAATAATAATGCAAATATATATGTATGGGTCGGTTAGCATAGGCTACCGCTGGTTCAATAAAATTGAACCGAACCGACCCATGTGAATCCATATCAACCCAGTTTGTTAACCCGTCCAGCCCGTCAACCCGAGTTAGCCCGCCCGAATCGGTTTACGTTGGTTTGGGTAAGCCGGTTTTGATCGGACGGTGATTTTTTGTCCAGCCCTAGTCTTGACCGATATGCAAAAAAAAATCGGAGCATATTTTGTTGCCTCTTCTGATTTTATGTCCCTCTACCAGCGCACAAGTAATCTGCATTTGAAGGACTAGATTGCTGTTTTCATTTTCAACTTGTGATTTTATGTCCCTTGAATAACTTATTTTATTTTTGAGATTCAATCAGGATCAACTGACCATAGTGAGAATATAAAATTAGTTGCATACTTTTTGCGCTCTTGTCCTTCTTTGCTAATATTCAATAATTTCCTTTTTCTTTTGTAGGAGCTCCTCCTTGCTGCAATTGACATGGTAGATTCTTATTCTAAATCTGGGGGATACGTTGTATATTCTACATGCTCAATCATGGTTGCTGAGGTTTGTTTTTCAGTTGCAACAAGCTTTCATGTTTATATGCTTGCTTTTCCATGTCCTATGTTTCTAATTTTTTCTCTCTTAAATATTATTCAGAATGAAGCAGTTATTGATTATGTGCTCAAAAGGAGGGATGTAAAGCTGGTTCCTTGTGGACTTGACTTTGGACGTCCAGGGTAATGATTGTTATCCCCTTACAGCATTGTTTTGATTTTTAGGAATCGTCTGTATTGTGACATTTGTTCTCCATCAGGTTTACAAAGTTTAGGGAACAGCGTTTTCACCCTTCATTAGATAAGACAAGACGTTTCTATCCACACGTGCACAATATGGATGGGTTTTTTGTTGCAAAGGTATGATATATGCTCATTTTTAGTTAGCTTTGATTTTTCTTGTTCGCATTCACTTCTAAATTTGAATGTATGATCACTCTTCAGATTGATTCCCCATTAAATTATCTCTTACGGAAGTTAGTTTTAAATTTATCCAGTAATGATTTTGGATACTAGTAAAGCAAACCAACAAATTTCTAGATTGATGAAATTGTTTGTACAAGATGGTAAACCATTGAGGGCTATGCTCTTAGTTTCATAGCTATTGTTGACATGTATAGGATATTATTGACCTAGTATGTTTTGTATAGTTTTGTGGCTACTGGTTTAGTTTGATAAAGGATATTTTGAGAAGTAGAAATGAAAAAATAATTATCTTATTGATTTAACATTCTCAAAATATCTGAGAGGTTTTTGTTGTTCTTCATACTTATACATGTTCGAGTTATTCCGTTTCAAAATATCCTCGGTGTTCAGCGCTGGATATTTTGATTGTATACTGGTGATTTTAAAGACACCGATTGCAGAATGTGTTATTGGCTCTCGGGCGAAAGTACTATTAGTTTTAATATTTTGATTTGATATCTTTCAGTTGAAAAAAATGAGCCACCCAAAACCTGCTGCAACATCAGAAACATTTGAAAAGGATGAAAAAGAAACCGAGCTTGTGATGGACGACGATAAACCTAGTAATGGCGTTAAAGAAAATGGCAATCATTCTTCTGAACCTGAATCCAAGAAGAGGAAGAAAGATAAATTCCCATCAAAACCAAGTAATGATGTAAAAGCCAATGTCAAAGAAGCTTCTGAACCTGAATCCAAGAAGAGGAAGAAAGATAAATTCTCCTCAAAACCAAGTAATGATGGAAAAGCTAATGTCACAGAAACTTCTGAAACTAAACCCAAGAGGGTGAAAAGGAAACCTCCATCTAGAGAGGAGATTTCAAAAGCCAGGTTAAATGTTTTATTCATATTTTTTATATTCAATAAATTTCCAGCCGTTTATATAATTATGTTTAAAAATCTAAGGATTTTGTGATTCCTGCAGAGAGGAGAAGAGACTTGCTTTGATAGAAAAGAAGAGAAAAAGTGGTAAGCAACAGAGACAAGAAAATGATGAATGATCAGTGGCAATACAAGAAGTATTGATGACCAACTGTGCAATTATAGCGCAGAATTGACGCAAGACTCCATCAATATGAGAGTACTGAGGTGTTGCATGTCGAAAGAATGTACCCTGGAGTCAGTGGCATGA

Protein sequence

>MS.gene04159.t1

MAPATKKKPSKPVKPQKAPKKVQIVPIKDDSTSESEEEEAPQLQHLELDGSDSDLSSDGDDQLADDFLQGSDEEEEDEDNEEKGSDLESGSGSDEDNDSESGEEDIARKSKLIDKKRERDSQAAADDLQTNIQTNIQDESDEFTLPTKQELEEEALRPPDLSNLQRRIKDIVRVLSNFKALRQDGATRKDYVDQLKTDIRSYYGYNEFLIGALVEMFPVVELMELIEAFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERIVDMAAAPGGKTTYIAALMKNSGIIFANEMKVPRLKSLTANLHRMGVSNTVVSNYDGKELPKVLGFNSVDRVLLDAPCSGTGVISKDESVKTSKNLEDIKKCAHLQKELLLAAIDMVDSYSKSGGYVVYSTCSIMVAENEAVIDYVLKRRDVKLVPCGLDFGRPGFTKFREQRFHPSLDKTRRFYPHVHNMDGFFVAKLKKMSHPKPAATSETFEKDEKETELVMDDDKPSNGVKENGNHSSEPESKKRKKDKFPSKPSNDVKANVKEASEPESKKRKKDKFSSKPSNDGKANVTETSETKPKRVKRKPPSREEISKAREEKRLALIEKKRKSELTQDSINMRVLRCCMSKECTLESVA