Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09400.t1 | XP_013455909.1 | 95.2 | 394 | 19 | 0 | 1 | 394 | 46 | 439 | 1.30E-218 | 768.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09400.t1 | Q67Y83 | 62.7 | 394 | 145 | 1 | 1 | 392 | 47 | 440 | 3.0e-144 | 513.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09400.t1 | A0A072UVR7 | 95.2 | 394 | 19 | 0 | 1 | 394 | 46 | 439 | 9.0e-219 | 768.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049341 | MS.gene09400 | 0.804634 | 1.97E-49 | -1.69E-46 |
MS.gene049703 | MS.gene09400 | -0.810862 | 9.34E-51 | -1.69E-46 |
MS.gene049745 | MS.gene09400 | 0.818678 | 1.73E-52 | -1.69E-46 |
MS.gene049756 | MS.gene09400 | 0.804688 | 1.92E-49 | -1.69E-46 |
MS.gene049887 | MS.gene09400 | 0.815491 | 9.00E-52 | -1.69E-46 |
MS.gene050085 | MS.gene09400 | 0.802824 | 4.67E-49 | -1.69E-46 |
MS.gene050277 | MS.gene09400 | 0.827118 | 1.87E-54 | -1.69E-46 |
MS.gene050386 | MS.gene09400 | 0.805539 | 1.27E-49 | -1.69E-46 |
MS.gene050689 | MS.gene09400 | 0.805059 | 1.60E-49 | -1.69E-46 |
MS.gene050778 | MS.gene09400 | 0.801926 | 7.15E-49 | -1.69E-46 |
MS.gene050807 | MS.gene09400 | 0.815293 | 9.96E-52 | -1.69E-46 |
MS.gene050838 | MS.gene09400 | 0.802335 | 5.89E-49 | -1.69E-46 |
MS.gene050987 | MS.gene09400 | 0.805753 | 1.15E-49 | -1.69E-46 |
MS.gene051102 | MS.gene09400 | 0.801582 | 8.41E-49 | -1.69E-46 |
MS.gene051245 | MS.gene09400 | 0.802659 | 5.05E-49 | -1.69E-46 |
MS.gene051577 | MS.gene09400 | 0.824309 | 8.66E-54 | -1.69E-46 |
MS.gene051757 | MS.gene09400 | 0.800222 | 1.59E-48 | -1.69E-46 |
MS.gene052133 | MS.gene09400 | 0.807359 | 5.25E-50 | -1.69E-46 |
MS.gene052302 | MS.gene09400 | 0.816182 | 6.31E-52 | -1.69E-46 |
MS.gene052376 | MS.gene09400 | 0.807796 | 4.24E-50 | -1.69E-46 |
MS.gene052397 | MS.gene09400 | 0.825137 | 5.52E-54 | -1.69E-46 |
MS.gene052665 | MS.gene09400 | 0.838843 | 2.26E-57 | -1.69E-46 |
MS.gene052856 | MS.gene09400 | 0.838533 | 2.72E-57 | -1.69E-46 |
MS.gene052858 | MS.gene09400 | 0.810036 | 1.41E-50 | -1.69E-46 |
MS.gene052860 | MS.gene09400 | 0.804825 | 1.79E-49 | -1.69E-46 |
MS.gene053216 | MS.gene09400 | 0.811228 | 7.78E-51 | -1.69E-46 |
MS.gene054537 | MS.gene09400 | 0.800349 | 1.50E-48 | -1.69E-46 |
MS.gene055441 | MS.gene09400 | 0.80579 | 1.13E-49 | -1.69E-46 |
MS.gene055512 | MS.gene09400 | 0.824572 | 7.50E-54 | -1.69E-46 |
MS.gene056181 | MS.gene09400 | 0.807814 | 4.21E-50 | -1.69E-46 |
MS.gene056432 | MS.gene09400 | 0.844791 | 6.07E-59 | -1.69E-46 |
MS.gene056760 | MS.gene09400 | 0.838581 | 2.64E-57 | -1.69E-46 |
MS.gene057057 | MS.gene09400 | 0.849414 | 3.28E-60 | -1.69E-46 |
MS.gene057140 | MS.gene09400 | 0.818193 | 2.23E-52 | -1.69E-46 |
MS.gene057234 | MS.gene09400 | 0.836007 | 1.20E-56 | -1.69E-46 |
MS.gene058054 | MS.gene09400 | 0.846146 | 2.61E-59 | -1.69E-46 |
MS.gene058055 | MS.gene09400 | 0.866411 | 2.91E-65 | -1.69E-46 |
MS.gene058238 | MS.gene09400 | 0.818841 | 1.59E-52 | -1.69E-46 |
MS.gene058906 | MS.gene09400 | 0.834399 | 3.07E-56 | -1.69E-46 |
MS.gene058982 | MS.gene09400 | 0.800872 | 1.18E-48 | -1.69E-46 |
MS.gene059171 | MS.gene09400 | 0.803659 | 3.14E-49 | -1.69E-46 |
MS.gene059317 | MS.gene09400 | 0.831267 | 1.84E-55 | -1.69E-46 |
MS.gene059713 | MS.gene09400 | 0.822375 | 2.45E-53 | -1.69E-46 |
MS.gene05978 | MS.gene09400 | 0.81208 | 5.08E-51 | -1.69E-46 |
MS.gene06001 | MS.gene09400 | 0.802776 | 4.78E-49 | -1.69E-46 |
MS.gene060084 | MS.gene09400 | 0.801451 | 8.95E-49 | -1.69E-46 |
MS.gene060165 | MS.gene09400 | 0.829883 | 4.01E-55 | -1.69E-46 |
MS.gene060619 | MS.gene09400 | 0.835089 | 2.06E-56 | -1.69E-46 |
MS.gene061006 | MS.gene09400 | 0.8053 | 1.43E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene09400 | MS.gene43171 | PPI |
MS.gene09400 | MS.gene05805 | PPI |
MS.gene09400 | MS.gene002690 | PPI |
MS.gene09400 | MS.gene037764 | PPI |
MS.gene09400 | MS.gene43589 | PPI |
MS.gene43592 | MS.gene09400 | PPI |
MS.gene09400 | MS.gene43588 | PPI |
MS.gene09400 | MS.gene05806 | PPI |
MS.gene020426 | MS.gene09400 | PPI |
MS.gene09400 | MS.gene43593 | PPI |
MS.gene09400 | MS.gene002688 | PPI |
MS.gene09400 | MS.gene004371 | PPI |
MS.gene022111 | MS.gene09400 | PPI |
MS.gene09400 | MS.gene05804 | PPI |
MS.gene09400 | MS.gene23880 | PPI |
MS.gene09400 | MS.gene004369 | PPI |
MS.gene09400 | MS.gene037763 | PPI |
MS.gene09400 | MS.gene002689 | PPI |
MS.gene09400 | MS.gene97299 | PPI |
MS.gene09400 | MS.gene80760 | PPI |
MS.gene09400 | MS.gene05803 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09400.t1 | MTR_4g056520 | 95.178 | 394 | 19 | 0 | 1 | 394 | 46 | 439 | 0.0 | 759 |
MS.gene09400.t1 | MTR_2g084530 | 69.466 | 393 | 116 | 3 | 1 | 392 | 46 | 435 | 0.0 | 523 |
MS.gene09400.t1 | MTR_4g084710 | 27.136 | 398 | 233 | 12 | 10 | 392 | 63 | 418 | 8.23e-32 | 126 |
MS.gene09400.t1 | MTR_5g097180 | 27.068 | 399 | 232 | 12 | 10 | 392 | 61 | 416 | 5.36e-31 | 124 |
MS.gene09400.t1 | MTR_4g057600 | 24.631 | 406 | 250 | 11 | 1 | 392 | 110 | 473 | 3.20e-29 | 119 |
MS.gene09400.t1 | MTR_4g057570 | 25.616 | 406 | 250 | 10 | 1 | 392 | 104 | 471 | 7.04e-27 | 112 |
MS.gene09400.t1 | MTR_1g050545 | 26.471 | 408 | 241 | 12 | 1 | 392 | 98 | 462 | 2.57e-26 | 110 |
MS.gene09400.t1 | MTR_2g095750 | 25.616 | 406 | 247 | 12 | 1 | 392 | 115 | 479 | 9.96e-26 | 109 |
MS.gene09400.t1 | MTR_1g094155 | 25.061 | 411 | 242 | 14 | 1 | 392 | 105 | 468 | 3.86e-25 | 107 |
MS.gene09400.t1 | MTR_4g057595 | 23.573 | 403 | 258 | 9 | 1 | 392 | 112 | 475 | 1.11e-24 | 106 |
MS.gene09400.t1 | MTR_4g057585 | 23.325 | 403 | 259 | 9 | 1 | 392 | 111 | 474 | 3.57e-24 | 104 |
MS.gene09400.t1 | MTR_2g012850 | 24.331 | 411 | 257 | 15 | 1 | 390 | 64 | 441 | 4.91e-22 | 98.2 |
MS.gene09400.t1 | MTR_4g089155 | 25.121 | 414 | 252 | 17 | 1 | 390 | 82 | 461 | 2.27e-21 | 96.3 |
MS.gene09400.t1 | MTR_2g095730 | 23.833 | 407 | 256 | 11 | 1 | 392 | 109 | 476 | 7.31e-21 | 95.1 |
MS.gene09400.t1 | MTR_8g099930 | 24.719 | 356 | 225 | 11 | 10 | 346 | 65 | 396 | 9.53e-21 | 94.4 |
MS.gene09400.t1 | MTR_2g012860 | 26.341 | 410 | 252 | 17 | 1 | 390 | 70 | 449 | 3.58e-20 | 92.8 |
MS.gene09400.t1 | MTR_7g080180 | 20.561 | 428 | 275 | 13 | 20 | 399 | 74 | 484 | 5.47e-19 | 89.4 |
MS.gene09400.t1 | MTR_8g011350 | 23.198 | 444 | 267 | 17 | 10 | 404 | 63 | 481 | 6.10e-19 | 89.0 |
MS.gene09400.t1 | MTR_3g498755 | 24.519 | 416 | 246 | 14 | 4 | 390 | 45 | 421 | 9.42e-19 | 88.2 |
MS.gene09400.t1 | MTR_3g079590 | 24.877 | 406 | 247 | 16 | 1 | 392 | 107 | 468 | 1.28e-18 | 88.2 |
MS.gene09400.t1 | MTR_1g021020 | 23.798 | 416 | 236 | 15 | 1 | 392 | 107 | 465 | 2.16e-18 | 87.4 |
MS.gene09400.t1 | MTR_1g020090 | 24.747 | 396 | 243 | 16 | 10 | 392 | 122 | 475 | 6.03e-18 | 86.3 |
MS.gene09400.t1 | MTR_1g040370 | 24.561 | 399 | 222 | 13 | 4 | 390 | 60 | 391 | 8.57e-18 | 85.1 |
MS.gene09400.t1 | MTR_3g079620 | 24.155 | 414 | 248 | 15 | 1 | 392 | 107 | 476 | 8.81e-18 | 85.5 |
MS.gene09400.t1 | MTR_4g075150 | 24.450 | 409 | 258 | 14 | 1 | 390 | 63 | 439 | 1.66e-17 | 84.7 |
MS.gene09400.t1 | MTR_8g011350 | 21.705 | 387 | 244 | 11 | 10 | 349 | 63 | 437 | 2.03e-17 | 84.3 |
MS.gene09400.t1 | MTR_7g051430 | 22.727 | 440 | 252 | 14 | 10 | 390 | 62 | 472 | 2.08e-17 | 84.3 |
MS.gene09400.t1 | MTR_4g075150 | 24.205 | 409 | 257 | 14 | 1 | 390 | 63 | 437 | 2.35e-17 | 84.3 |
MS.gene09400.t1 | MTR_3g434850 | 23.571 | 420 | 274 | 13 | 4 | 412 | 60 | 443 | 2.84e-17 | 84.0 |
MS.gene09400.t1 | MTR_3g114620 | 47.170 | 106 | 19 | 2 | 77 | 182 | 19 | 87 | 3.43e-17 | 76.6 |
MS.gene09400.t1 | MTR_3g079570 | 23.923 | 418 | 235 | 16 | 1 | 392 | 108 | 468 | 1.02e-16 | 82.4 |
MS.gene09400.t1 | MTR_7g080180 | 20.588 | 374 | 246 | 10 | 20 | 349 | 74 | 440 | 1.07e-16 | 82.0 |
MS.gene09400.t1 | MTR_2g449850 | 25.441 | 397 | 252 | 15 | 10 | 390 | 70 | 438 | 1.49e-16 | 81.6 |
MS.gene09400.t1 | MTR_3g079560 | 23.039 | 408 | 252 | 15 | 1 | 392 | 107 | 468 | 1.86e-16 | 81.6 |
MS.gene09400.t1 | MTR_1g021010 | 22.906 | 406 | 253 | 15 | 1 | 392 | 105 | 464 | 2.20e-16 | 81.3 |
MS.gene09400.t1 | MTR_7g021130 | 25.369 | 339 | 220 | 10 | 20 | 346 | 74 | 391 | 3.47e-16 | 80.5 |
MS.gene09400.t1 | MTR_3g079600 | 21.814 | 408 | 260 | 13 | 1 | 392 | 105 | 469 | 3.69e-16 | 80.5 |
MS.gene09400.t1 | MTR_4g122950 | 25.806 | 248 | 160 | 8 | 1 | 238 | 68 | 301 | 6.94e-16 | 79.7 |
MS.gene09400.t1 | MTR_3g090130 | 23.691 | 401 | 262 | 14 | 10 | 392 | 60 | 434 | 1.66e-15 | 78.6 |
MS.gene09400.t1 | MTR_0003s0560 | 24.528 | 212 | 136 | 6 | 2 | 192 | 102 | 310 | 2.21e-15 | 77.4 |
MS.gene09400.t1 | MTR_5g072570 | 31.333 | 150 | 95 | 3 | 10 | 151 | 61 | 210 | 2.27e-15 | 78.2 |
MS.gene09400.t1 | MTR_3g034290 | 22.554 | 368 | 222 | 13 | 2 | 347 | 103 | 429 | 9.43e-15 | 76.3 |
MS.gene09400.t1 | MTR_0003s0560 | 24.528 | 212 | 136 | 6 | 2 | 192 | 102 | 310 | 9.51e-15 | 76.3 |
MS.gene09400.t1 | MTR_3g090150 | 31.579 | 152 | 94 | 4 | 10 | 151 | 65 | 216 | 2.01e-14 | 75.1 |
MS.gene09400.t1 | MTR_2g062980 | 28.302 | 159 | 104 | 5 | 1 | 152 | 69 | 224 | 2.24e-14 | 75.1 |
MS.gene09400.t1 | MTR_1g095560 | 30.597 | 134 | 85 | 3 | 1 | 128 | 62 | 193 | 4.28e-14 | 74.3 |
MS.gene09400.t1 | MTR_1g095560 | 30.597 | 134 | 85 | 3 | 1 | 128 | 62 | 193 | 4.50e-14 | 73.9 |
MS.gene09400.t1 | MTR_7g051430 | 31.410 | 156 | 91 | 5 | 10 | 151 | 62 | 215 | 7.20e-14 | 73.2 |
MS.gene09400.t1 | MTR_3g079630 | 29.193 | 161 | 103 | 5 | 1 | 154 | 107 | 263 | 1.50e-13 | 72.8 |
MS.gene09400.t1 | MTR_2g063000 | 29.078 | 141 | 89 | 4 | 1 | 133 | 68 | 205 | 1.91e-13 | 72.4 |
MS.gene09400.t1 | MTR_7g013790 | 22.879 | 389 | 255 | 12 | 20 | 390 | 79 | 440 | 1.94e-13 | 72.0 |
MS.gene09400.t1 | MTR_2g062990 | 29.496 | 139 | 89 | 4 | 1 | 133 | 69 | 204 | 3.91e-13 | 71.2 |
MS.gene09400.t1 | MTR_3g034290 | 23.529 | 238 | 147 | 7 | 2 | 223 | 103 | 321 | 5.26e-13 | 70.5 |
MS.gene09400.t1 | MTR_2g081620 | 27.044 | 159 | 106 | 5 | 1 | 152 | 70 | 225 | 7.14e-13 | 70.5 |
MS.gene09400.t1 | MTR_4g122960 | 29.851 | 134 | 84 | 4 | 1 | 128 | 68 | 197 | 1.45e-12 | 69.7 |
MS.gene09400.t1 | MTR_1g095540 | 30.147 | 136 | 83 | 4 | 1 | 128 | 62 | 193 | 1.51e-12 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09400.t1 | AT2G27920 | 64.467 | 394 | 138 | 1 | 1 | 392 | 47 | 440 | 0.0 | 520 |
MS.gene09400.t1 | AT2G27920 | 62.192 | 365 | 136 | 1 | 30 | 392 | 4 | 368 | 4.82e-160 | 456 |
MS.gene09400.t1 | AT2G27920 | 59.202 | 326 | 131 | 1 | 69 | 392 | 48 | 373 | 7.35e-133 | 387 |
MS.gene09400.t1 | AT1G15000 | 26.601 | 406 | 235 | 11 | 10 | 398 | 55 | 414 | 5.80e-31 | 123 |
MS.gene09400.t1 | AT5G22980 | 25.616 | 406 | 245 | 11 | 1 | 392 | 113 | 475 | 4.25e-29 | 119 |
MS.gene09400.t1 | AT3G45010 | 25.061 | 407 | 248 | 11 | 1 | 392 | 116 | 480 | 6.15e-29 | 119 |
MS.gene09400.t1 | AT3G10410 | 25.245 | 408 | 244 | 13 | 1 | 392 | 114 | 476 | 5.56e-23 | 101 |
MS.gene09400.t1 | AT4G15100 | 26.225 | 408 | 260 | 15 | 1 | 390 | 73 | 457 | 3.38e-20 | 92.8 |
MS.gene09400.t1 | AT1G11080 | 24.816 | 407 | 269 | 14 | 1 | 390 | 79 | 465 | 2.77e-19 | 90.1 |
MS.gene09400.t1 | AT1G11080 | 24.816 | 407 | 269 | 14 | 1 | 390 | 79 | 465 | 2.88e-19 | 90.1 |
MS.gene09400.t1 | AT4G12910 | 21.968 | 437 | 274 | 12 | 10 | 399 | 67 | 483 | 6.74e-19 | 89.0 |
MS.gene09400.t1 | AT3G25420 | 22.695 | 423 | 268 | 16 | 20 | 399 | 74 | 480 | 5.83e-17 | 83.2 |
MS.gene09400.t1 | AT2G35780 | 23.741 | 417 | 261 | 13 | 1 | 399 | 59 | 436 | 9.62e-17 | 82.4 |
MS.gene09400.t1 | AT3G52000 | 24.936 | 389 | 233 | 16 | 20 | 390 | 108 | 455 | 1.13e-16 | 82.4 |
MS.gene09400.t1 | AT5G42230 | 32.667 | 150 | 93 | 3 | 10 | 151 | 60 | 209 | 1.27e-16 | 82.0 |
MS.gene09400.t1 | AT5G42230 | 32.667 | 150 | 93 | 3 | 10 | 151 | 60 | 209 | 1.27e-16 | 82.0 |
MS.gene09400.t1 | AT1G43780 | 25.847 | 236 | 147 | 7 | 10 | 227 | 69 | 294 | 1.40e-16 | 82.0 |
MS.gene09400.t1 | AT4G12910 | 21.875 | 384 | 245 | 10 | 10 | 349 | 67 | 439 | 1.94e-16 | 81.3 |
MS.gene09400.t1 | AT3G17180 | 25.391 | 256 | 159 | 10 | 1 | 240 | 68 | 307 | 2.85e-16 | 80.9 |
MS.gene09400.t1 | AT3G17180 | 25.391 | 256 | 159 | 10 | 1 | 240 | 68 | 307 | 3.62e-16 | 80.9 |
MS.gene09400.t1 | AT5G42240 | 30.539 | 167 | 103 | 4 | 10 | 163 | 64 | 230 | 4.12e-16 | 80.5 |
MS.gene09400.t1 | AT5G23210 | 28.241 | 216 | 141 | 6 | 1 | 207 | 80 | 290 | 4.76e-16 | 80.1 |
MS.gene09400.t1 | AT5G23210 | 28.241 | 216 | 141 | 6 | 1 | 207 | 80 | 290 | 5.57e-16 | 80.1 |
MS.gene09400.t1 | AT3G07990 | 31.677 | 161 | 97 | 5 | 1 | 152 | 63 | 219 | 6.66e-16 | 79.7 |
MS.gene09400.t1 | AT4G30810 | 24.250 | 400 | 265 | 16 | 1 | 390 | 67 | 438 | 8.58e-16 | 79.7 |
MS.gene09400.t1 | AT2G12480 | 31.333 | 150 | 95 | 3 | 10 | 151 | 63 | 212 | 3.89e-15 | 77.4 |
MS.gene09400.t1 | AT2G12480 | 31.333 | 150 | 95 | 3 | 10 | 151 | 63 | 212 | 3.92e-15 | 77.4 |
MS.gene09400.t1 | AT2G12480 | 31.333 | 150 | 95 | 3 | 10 | 151 | 63 | 212 | 3.94e-15 | 77.4 |
MS.gene09400.t1 | AT2G24010 | 33.582 | 134 | 79 | 3 | 1 | 128 | 59 | 188 | 4.38e-15 | 77.4 |
MS.gene09400.t1 | AT2G12480 | 31.333 | 150 | 95 | 3 | 10 | 151 | 63 | 212 | 4.70e-15 | 77.4 |
MS.gene09400.t1 | AT2G33530 | 23.426 | 397 | 265 | 14 | 10 | 390 | 65 | 438 | 8.68e-15 | 76.3 |
MS.gene09400.t1 | AT5G08260 | 29.341 | 167 | 98 | 5 | 1 | 155 | 69 | 227 | 1.04e-14 | 76.3 |
MS.gene09400.t1 | AT1G61130 | 34.043 | 141 | 84 | 3 | 20 | 151 | 75 | 215 | 1.04e-14 | 76.3 |
MS.gene09400.t1 | AT1G28110 | 24.317 | 366 | 235 | 11 | 4 | 353 | 61 | 400 | 1.13e-14 | 75.9 |
MS.gene09400.t1 | AT1G28110 | 24.317 | 366 | 235 | 11 | 4 | 353 | 61 | 400 | 1.13e-14 | 75.9 |
MS.gene09400.t1 | AT3G02110 | 30.935 | 139 | 90 | 2 | 20 | 152 | 81 | 219 | 2.32e-14 | 75.1 |
MS.gene09400.t1 | AT2G24000 | 34.783 | 115 | 69 | 2 | 20 | 128 | 75 | 189 | 2.74e-14 | 74.7 |
MS.gene09400.t1 | AT3G52020 | 25.432 | 405 | 237 | 20 | 10 | 390 | 111 | 474 | 4.08e-14 | 74.3 |
MS.gene09400.t1 | AT2G05850 | 23.367 | 398 | 241 | 16 | 16 | 390 | 104 | 460 | 1.91e-12 | 69.3 |
MS.gene09400.t1 | AT4G30610 | 32.558 | 129 | 77 | 3 | 10 | 128 | 63 | 191 | 3.75e-12 | 68.2 |
MS.gene09400.t1 | AT1G73290 | 30.534 | 131 | 76 | 3 | 1 | 121 | 61 | 186 | 5.09e-12 | 67.0 |
MS.gene09400.t1 | AT1G73290 | 30.534 | 131 | 76 | 3 | 1 | 121 | 61 | 186 | 9.46e-12 | 66.6 |
MS.gene09400.t1 | AT1G73290 | 30.534 | 131 | 76 | 3 | 1 | 121 | 61 | 186 | 1.03e-11 | 66.6 |
MS.gene09400.t1 | AT1G73300 | 31.298 | 131 | 75 | 3 | 1 | 121 | 62 | 187 | 1.39e-11 | 66.2 |
MS.gene09400.t1 | AT1G73300 | 31.298 | 131 | 75 | 3 | 1 | 121 | 62 | 187 | 1.39e-11 | 66.2 |
MS.gene09400.t1 | AT5G36180 | 31.298 | 131 | 75 | 3 | 1 | 121 | 62 | 187 | 2.47e-11 | 65.5 |
MS.gene09400.t1 | AT2G35770 | 28.302 | 159 | 101 | 5 | 1 | 151 | 67 | 220 | 3.34e-11 | 65.5 |
MS.gene09400.t1 | AT5G22960 | 30.275 | 109 | 61 | 1 | 20 | 128 | 63 | 156 | 4.32e-11 | 62.4 |
MS.gene09400.t1 | AT1G73280 | 23.616 | 271 | 173 | 8 | 1 | 245 | 62 | 324 | 4.97e-11 | 64.3 |
MS.gene09400.t1 | AT1G73280 | 21.789 | 436 | 243 | 17 | 1 | 406 | 62 | 429 | 6.72e-11 | 64.3 |
MS.gene09400.t1 | AT1G73270 | 31.298 | 131 | 75 | 3 | 1 | 121 | 62 | 187 | 7.34e-11 | 64.3 |
MS.gene09400.t1 | AT1G73270 | 29.012 | 162 | 99 | 4 | 1 | 151 | 62 | 218 | 7.47e-11 | 64.3 |
Find 105 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTACAATTCTATTGGATTCT+TGG | 0.200204 | 4.1:+41376568 | MS.gene09400:CDS |
CCCTGCAACCAGAGAATTAT+TGG | 0.209686 | 4.1:-41373153 | None:intergenic |
CTTCTTACCTCATCAATTCT+TGG | 0.221137 | 4.1:-41375682 | None:intergenic |
AAACTTGGCCCTTTACTAAA+TGG | 0.253144 | 4.1:+41375459 | MS.gene09400:CDS |
AGCCACCACCAGTGAGTTTC+CGG | 0.263622 | 4.1:-41380138 | None:intergenic |
AATTCAACATGGTTGTTAAA+AGG | 0.269721 | 4.1:+41373476 | MS.gene09400:CDS |
GGCAAATTTGCTGTCACTCT+TGG | 0.293076 | 4.1:+41374056 | MS.gene09400:CDS |
GCCAATAATTCTCTGGTTGC+AGG | 0.294647 | 4.1:+41373152 | MS.gene09400:CDS |
CAAGAATCCAATAGAATTGT+AGG | 0.295802 | 4.1:-41376567 | None:intergenic |
ATCATTGGATAGGGTGCTTC+AGG | 0.322191 | 4.1:+41373395 | MS.gene09400:intron |
TTGCAGAAGCACACATGTTT+TGG | 0.324024 | 4.1:+41373082 | None:intergenic |
TAGACTTACGTGACATTCTC+AGG | 0.332673 | 4.1:-41375510 | None:intergenic |
AAGATAAGTGAAAACTTCAT+TGG | 0.346770 | 4.1:-41375641 | None:intergenic |
TTACTTACCACAAAATCTTC+TGG | 0.356577 | 4.1:-41374536 | None:intergenic |
TACATTGTGGCAGAGTCTTA+TGG | 0.367175 | 4.1:+41374032 | MS.gene09400:CDS |
ACTTATGTAGGTGTGGCATT+AGG | 0.381627 | 4.1:+41374497 | MS.gene09400:intron |
GGATAGGGTGCTTCAGGTGT+TGG | 0.387749 | 4.1:+41373401 | MS.gene09400:intron |
GATAGGGTGCTTCAGGTGTT+GGG | 0.400100 | 4.1:+41373402 | MS.gene09400:intron |
TTATGACACCATTTAGTAAA+GGG | 0.401053 | 4.1:-41375467 | None:intergenic |
GAGAAGAAGACCCTGTCCTT+AGG | 0.409718 | 4.1:-41375422 | None:intergenic |
GAAGAATCTTCCACTCTGTA+TGG | 0.410067 | 4.1:-41373120 | None:intergenic |
GTCTCAAGACTCGATGATAA+TGG | 0.410949 | 4.1:+41374776 | MS.gene09400:CDS |
AACAACCATGTTGAATTCCT+TGG | 0.417373 | 4.1:-41373470 | None:intergenic |
GAGTTTCCGGTCATCTTCTC+CGG | 0.418323 | 4.1:-41380125 | None:intergenic |
AACCCAAGCTTCAGTCCCTT+TGG | 0.424615 | 4.1:-41376128 | None:intergenic |
TACAATTTCTTGGTCGATGC+GGG | 0.430582 | 4.1:+41375318 | MS.gene09400:CDS |
TTCTTGGTCGATGCGGGAAG+TGG | 0.440552 | 4.1:+41375324 | MS.gene09400:CDS |
AAACTGTATCCTGTTCCAAC+TGG | 0.449212 | 4.1:-41373897 | None:intergenic |
TTCTATTGGATTCTTGGAGC+TGG | 0.449461 | 4.1:+41376574 | MS.gene09400:CDS |
AGAAGAAGACCCTGTCCTTA+GGG | 0.450693 | 4.1:-41375421 | None:intergenic |
GGTGCTTCAGGTGTTGGGAT+TGG | 0.451236 | 4.1:+41373407 | MS.gene09400:CDS |
AAAAGGAGATCTCTTGTTTG+TGG | 0.452395 | 4.1:+41373493 | MS.gene09400:CDS |
ATTATAGGTTGATCAGCTAC+TGG | 0.456406 | 4.1:+41375803 | MS.gene09400:intron |
CGAGTCTTGAGACGTCTTTG+AGG | 0.459472 | 4.1:-41374766 | None:intergenic |
TCTTTATTCCGTAGGTGGGA+AGG | 0.462971 | 4.1:+41376457 | MS.gene09400:intron |
AAGGGACTGAAGCTTGGGTT+AGG | 0.462980 | 4.1:+41376131 | MS.gene09400:CDS |
GGTTGATCAGCTACTGGCTA+AGG | 0.466777 | 4.1:+41375809 | MS.gene09400:intron |
TACCAAAGGGACTGAAGCTT+GGG | 0.469620 | 4.1:+41376126 | MS.gene09400:CDS |
CTACCAAAGGGACTGAAGCT+TGG | 0.476951 | 4.1:+41376125 | MS.gene09400:CDS |
TTTATGACACCATTTAGTAA+AGG | 0.477365 | 4.1:-41375468 | None:intergenic |
CCTTAGGGAAGTAAGATACT+TGG | 0.479071 | 4.1:-41375406 | None:intergenic |
CAGGACAATCCAGTTGGAAC+AGG | 0.483965 | 4.1:+41373888 | MS.gene09400:intron |
AGGACAGGGTCTTCTTCTCC+TGG | 0.484963 | 4.1:+41375426 | MS.gene09400:CDS |
ATCTAATTTGTGCTACCAAA+GGG | 0.486363 | 4.1:+41376113 | MS.gene09400:CDS |
CTTTATTCCGTAGGTGGGAA+GGG | 0.493124 | 4.1:+41376458 | MS.gene09400:intron |
CCTGGTGGTGATGATAAACT+TGG | 0.495610 | 4.1:+41375444 | MS.gene09400:CDS |
GATTAATAAAAGAAAGATCA+AGG | 0.496246 | 4.1:+41375373 | MS.gene09400:CDS |
TATCTTACTTCCCTAAGGAC+AGG | 0.502007 | 4.1:+41375411 | MS.gene09400:CDS |
AGCCATGGCCAATAATTCTC+TGG | 0.505294 | 4.1:+41373145 | MS.gene09400:CDS |
ATCTGAATATGTAGTTGTCA+TGG | 0.508315 | 4.1:+41374735 | MS.gene09400:intron |
GACCGGAAACTCACTGGTGG+TGG | 0.516684 | 4.1:+41380136 | MS.gene09400:CDS |
AAATTGAAACTTACACTTGG+AGG | 0.521572 | 4.1:+41374110 | MS.gene09400:CDS |
TAAAAGAAAGATCAAGGAAG+AGG | 0.522688 | 4.1:+41375379 | MS.gene09400:CDS |
TTAATGATGCAACTGACTCA+TGG | 0.525154 | 4.1:+41374971 | MS.gene09400:CDS |
AACCAGAGAATTATTGGCCA+TGG | 0.526681 | 4.1:-41373147 | None:intergenic |
ACTCACTGGTGGTGGCTCTC+CGG | 0.528276 | 4.1:+41380144 | MS.gene09400:CDS |
TGGATACCAGCTTGAAGCCA+AGG | 0.530260 | 4.1:+41373453 | MS.gene09400:CDS |
TGAATTCCTTGGCTTCAAGC+TGG | 0.530298 | 4.1:-41373459 | None:intergenic |
ATCAAGAAGCAACTTGAAGA+TGG | 0.537399 | 4.1:+41374943 | MS.gene09400:CDS |
GATCTAATTTGTGCTACCAA+AGG | 0.546200 | 4.1:+41376112 | MS.gene09400:CDS |
CACAAGCCGGAGAAGATGAC+CGG | 0.547830 | 4.1:+41380119 | MS.gene09400:CDS |
TTTGTTACCACCACAGTAGA+GGG | 0.555703 | 4.1:-41376512 | None:intergenic |
AAGACTCGATGATAATGGAC+TGG | 0.560259 | 4.1:+41374781 | MS.gene09400:CDS |
TCTGAATATGTAGTTGTCAT+GGG | 0.564083 | 4.1:+41374736 | MS.gene09400:intron |
AAAGAGTCCTTTGTACATTG+TGG | 0.565413 | 4.1:+41374019 | MS.gene09400:CDS |
GAAGATGACCGGAAACTCAC+TGG | 0.566583 | 4.1:+41380130 | MS.gene09400:CDS |
TCCATTGTAGACAGTAACAT+TGG | 0.569749 | 4.1:-41375835 | None:intergenic |
GACATATCAGCAATGGCAGT+AGG | 0.570461 | 4.1:+41375351 | MS.gene09400:CDS |
CCAATAATTCTCTGGTTGCA+GGG | 0.571892 | 4.1:+41373153 | MS.gene09400:CDS |
CCAAGTATCTTACTTCCCTA+AGG | 0.573294 | 4.1:+41375406 | MS.gene09400:CDS |
CTTCATTCTAAACACATCGC+CGG | 0.576048 | 4.1:-41380163 | None:intergenic |
TATGAAGCCAAGAATTGATG+AGG | 0.578416 | 4.1:+41375675 | MS.gene09400:CDS |
AAGAAATTGAAACTTACACT+TGG | 0.579577 | 4.1:+41374107 | MS.gene09400:CDS |
TATTTGATTATAGATGGGGA+GGG | 0.582452 | 4.1:+41375614 | MS.gene09400:intron |
CAATAGAAGAAAACACAAGC+CGG | 0.586867 | 4.1:+41380106 | MS.gene09400:CDS |
GTTGATCAGCTACTGGCTAA+GGG | 0.587456 | 4.1:+41375810 | MS.gene09400:CDS |
TGGAAGATTCTTCAAAGCCA+TGG | 0.593562 | 4.1:+41373130 | MS.gene09400:CDS |
GGCTTCAAGCTGGTATCCAA+AGG | 0.594499 | 4.1:-41373449 | None:intergenic |
ATTTGTTACCACCACAGTAG+AGG | 0.594837 | 4.1:-41376513 | None:intergenic |
TTACAATTTCTTGGTCGATG+CGG | 0.596051 | 4.1:+41375317 | MS.gene09400:CDS |
GTGTGGCATTAGGAGACAGT+TGG | 0.599447 | 4.1:+41374507 | MS.gene09400:CDS |
AGACTTACGTGACATTCTCA+GGG | 0.602881 | 4.1:-41375509 | None:intergenic |
GTATTTGATTATAGATGGGG+AGG | 0.603981 | 4.1:+41375613 | MS.gene09400:intron |
CTTGAGACGTCTTTGAGGAG+AGG | 0.606726 | 4.1:-41374761 | None:intergenic |
ATAACACAGGACAATCCAGT+TGG | 0.609437 | 4.1:+41373882 | MS.gene09400:intron |
GACTCTGCCACAATGTACAA+AGG | 0.618531 | 4.1:-41374026 | None:intergenic |
GCCAATGTTACTGTCTACAA+TGG | 0.619525 | 4.1:+41375834 | MS.gene09400:CDS |
TGGTTCAGACATATCAGCAA+TGG | 0.623686 | 4.1:+41375344 | MS.gene09400:CDS |
ACAGGGTCTTCTTCTCCTGG+TGG | 0.631577 | 4.1:+41375429 | MS.gene09400:CDS |
ATCTTACTTCCCTAAGGACA+GGG | 0.631973 | 4.1:+41375412 | MS.gene09400:CDS |
CCAAGTTTATCATCACCACC+AGG | 0.637624 | 4.1:-41375444 | None:intergenic |
AAATAATTTAATCAACAATG+TGG | 0.638143 | 4.1:-41373976 | None:intergenic |
TTCAACAAGCAGCAACGATG+TGG | 0.652548 | 4.1:+41375014 | MS.gene09400:CDS |
TGAAGCCAAGGAATTCAACA+TGG | 0.659940 | 4.1:+41373465 | MS.gene09400:CDS |
TGGAGATCAGTATTGCTCAG+AGG | 0.661077 | 4.1:+41374920 | MS.gene09400:intron |
GGTGGTAACAAATCGACCAA+AGG | 0.673311 | 4.1:+41376523 | MS.gene09400:CDS |
GACAGAACACCCCTCTACTG+TGG | 0.677504 | 4.1:+41376502 | MS.gene09400:CDS |
AGAACACCCCTCTACTGTGG+TGG | 0.678028 | 4.1:+41376505 | MS.gene09400:CDS |
TTGTTACCACCACAGTAGAG+GGG | 0.680201 | 4.1:-41376511 | None:intergenic |
CAACAATGTGGTCAAATCTG+TGG | 0.683124 | 4.1:-41373964 | None:intergenic |
CTGAATATGTAGTTGTCATG+GGG | 0.684612 | 4.1:+41374737 | MS.gene09400:intron |
ATAATTCTCTGGTTGCAGGG+TGG | 0.685909 | 4.1:+41373156 | MS.gene09400:CDS |
TTATAAAAGTCCATACAGAG+TGG | 0.699820 | 4.1:+41373110 | MS.gene09400:CDS |
ATTGTGGCAGAGTCTTATGG+TGG | 0.700649 | 4.1:+41374035 | MS.gene09400:CDS |
GATGACCGGAAACTCACTGG+TGG | 0.721425 | 4.1:+41380133 | MS.gene09400:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 41373096 | 41380178 | 41373096 | ID=MS.gene09400 |
chr4.1 | mRNA | 41373096 | 41380178 | 41373096 | ID=MS.gene09400.t1;Parent=MS.gene09400 |
chr4.1 | exon | 41373096 | 41373182 | 41373096 | ID=MS.gene09400.t1.exon1;Parent=MS.gene09400.t1 |
chr4.1 | CDS | 41373096 | 41373182 | 41373096 | ID=cds.MS.gene09400.t1;Parent=MS.gene09400.t1 |
chr4.1 | exon | 41373407 | 41373514 | 41373407 | ID=MS.gene09400.t1.exon2;Parent=MS.gene09400.t1 |
chr4.1 | CDS | 41373407 | 41373514 | 41373407 | ID=cds.MS.gene09400.t1;Parent=MS.gene09400.t1 |
chr4.1 | exon | 41373891 | 41374131 | 41373891 | ID=MS.gene09400.t1.exon3;Parent=MS.gene09400.t1 |
chr4.1 | CDS | 41373891 | 41374131 | 41373891 | ID=cds.MS.gene09400.t1;Parent=MS.gene09400.t1 |
chr4.1 | exon | 41374507 | 41374550 | 41374507 | ID=MS.gene09400.t1.exon4;Parent=MS.gene09400.t1 |
chr4.1 | CDS | 41374507 | 41374550 | 41374507 | ID=cds.MS.gene09400.t1;Parent=MS.gene09400.t1 |
chr4.1 | exon | 41374749 | 41374816 | 41374749 | ID=MS.gene09400.t1.exon5;Parent=MS.gene09400.t1 |
chr4.1 | CDS | 41374749 | 41374816 | 41374749 | ID=cds.MS.gene09400.t1;Parent=MS.gene09400.t1 |
chr4.1 | exon | 41374930 | 41375035 | 41374930 | ID=MS.gene09400.t1.exon6;Parent=MS.gene09400.t1 |
chr4.1 | CDS | 41374930 | 41375035 | 41374930 | ID=cds.MS.gene09400.t1;Parent=MS.gene09400.t1 |
chr4.1 | exon | 41375312 | 41375523 | 41375312 | ID=MS.gene09400.t1.exon7;Parent=MS.gene09400.t1 |
chr4.1 | CDS | 41375312 | 41375523 | 41375312 | ID=cds.MS.gene09400.t1;Parent=MS.gene09400.t1 |
chr4.1 | exon | 41375627 | 41375696 | 41375627 | ID=MS.gene09400.t1.exon8;Parent=MS.gene09400.t1 |
chr4.1 | CDS | 41375627 | 41375696 | 41375627 | ID=cds.MS.gene09400.t1;Parent=MS.gene09400.t1 |
chr4.1 | exon | 41375810 | 41375860 | 41375810 | ID=MS.gene09400.t1.exon9;Parent=MS.gene09400.t1 |
chr4.1 | CDS | 41375810 | 41375860 | 41375810 | ID=cds.MS.gene09400.t1;Parent=MS.gene09400.t1 |
chr4.1 | exon | 41376109 | 41376161 | 41376109 | ID=MS.gene09400.t1.exon10;Parent=MS.gene09400.t1 |
chr4.1 | CDS | 41376109 | 41376161 | 41376109 | ID=cds.MS.gene09400.t1;Parent=MS.gene09400.t1 |
chr4.1 | exon | 41376471 | 41376603 | 41376471 | ID=MS.gene09400.t1.exon11;Parent=MS.gene09400.t1 |
chr4.1 | CDS | 41376471 | 41376603 | 41376471 | ID=cds.MS.gene09400.t1;Parent=MS.gene09400.t1 |
chr4.1 | exon | 41380095 | 41380178 | 41380095 | ID=MS.gene09400.t1.exon12;Parent=MS.gene09400.t1 |
chr4.1 | CDS | 41380095 | 41380178 | 41380095 | ID=cds.MS.gene09400.t1;Parent=MS.gene09400.t1 |
Gene Sequence |
Protein sequence |