Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039181.t1 | XP_013464352.1 | 96.8 | 221 | 7 | 0 | 1 | 221 | 1 | 221 | 9.20E-120 | 439.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039181.t1 | Q03666 | 68.8 | 221 | 66 | 2 | 2 | 221 | 3 | 221 | 8.8e-87 | 321.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039181.t1 | A0A072V9C3 | 96.8 | 221 | 7 | 0 | 1 | 221 | 1 | 221 | 6.6e-120 | 439.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039181.t1 | MTR_2g070210 | 96.833 | 221 | 7 | 0 | 1 | 221 | 1 | 221 | 1.26e-157 | 435 |
| MS.gene039181.t1 | MTR_2g070150 | 79.612 | 206 | 40 | 1 | 1 | 206 | 1 | 204 | 1.08e-122 | 346 |
| MS.gene039181.t1 | MTR_2g070180 | 72.811 | 217 | 57 | 1 | 1 | 217 | 1 | 215 | 2.70e-120 | 340 |
| MS.gene039181.t1 | MTR_2g070140 | 76.098 | 205 | 47 | 1 | 17 | 221 | 1 | 203 | 3.22e-117 | 332 |
| MS.gene039181.t1 | MTR_2g070130 | 67.873 | 221 | 69 | 1 | 1 | 221 | 1 | 219 | 1.96e-114 | 326 |
| MS.gene039181.t1 | MTR_2g070200 | 70.404 | 223 | 62 | 3 | 1 | 221 | 1 | 221 | 1.03e-112 | 322 |
| MS.gene039181.t1 | MTR_3g467420 | 63.594 | 217 | 77 | 1 | 5 | 221 | 10 | 224 | 5.59e-100 | 289 |
| MS.gene039181.t1 | MTR_2g070060 | 59.729 | 221 | 87 | 1 | 1 | 221 | 1 | 219 | 3.62e-97 | 282 |
| MS.gene039181.t1 | MTR_2g070070 | 61.538 | 221 | 83 | 1 | 1 | 221 | 1 | 219 | 3.29e-95 | 277 |
| MS.gene039181.t1 | MTR_3g467430 | 60.930 | 215 | 82 | 1 | 2 | 216 | 7 | 219 | 1.59e-93 | 273 |
| MS.gene039181.t1 | MTR_2g070110 | 59.276 | 221 | 87 | 2 | 1 | 221 | 1 | 218 | 6.65e-90 | 264 |
| MS.gene039181.t1 | MTR_4g124130 | 57.014 | 221 | 94 | 1 | 1 | 221 | 1 | 220 | 4.92e-89 | 261 |
| MS.gene039181.t1 | MTR_8g056940 | 59.259 | 216 | 86 | 1 | 1 | 216 | 1 | 214 | 1.15e-88 | 261 |
| MS.gene039181.t1 | MTR_2g070120 | 56.881 | 218 | 91 | 2 | 1 | 218 | 1 | 215 | 1.21e-87 | 258 |
| MS.gene039181.t1 | MTR_5g076900 | 51.364 | 220 | 105 | 2 | 2 | 221 | 4 | 221 | 4.77e-78 | 234 |
| MS.gene039181.t1 | MTR_0186s0030 | 62.238 | 143 | 52 | 1 | 1 | 143 | 1 | 141 | 6.78e-57 | 177 |
| MS.gene039181.t1 | MTR_1g090060 | 42.654 | 211 | 114 | 5 | 4 | 210 | 3 | 210 | 6.82e-51 | 165 |
| MS.gene039181.t1 | MTR_3g099757 | 41.553 | 219 | 121 | 5 | 3 | 218 | 4 | 218 | 1.54e-47 | 156 |
| MS.gene039181.t1 | MTR_8g087410 | 42.466 | 219 | 117 | 6 | 2 | 217 | 4 | 216 | 2.11e-47 | 156 |
| MS.gene039181.t1 | MTR_8g087425 | 39.352 | 216 | 126 | 3 | 2 | 215 | 3 | 215 | 3.09e-47 | 155 |
| MS.gene039181.t1 | MTR_7g065720 | 41.509 | 212 | 116 | 6 | 3 | 210 | 6 | 213 | 5.59e-47 | 155 |
| MS.gene039181.t1 | MTR_5g037380 | 43.243 | 222 | 115 | 7 | 2 | 214 | 3 | 222 | 5.77e-47 | 155 |
| MS.gene039181.t1 | MTR_7g065660 | 41.706 | 211 | 116 | 5 | 3 | 210 | 6 | 212 | 6.94e-46 | 152 |
| MS.gene039181.t1 | MTR_1g090100 | 41.429 | 210 | 116 | 4 | 5 | 210 | 3 | 209 | 9.97e-46 | 151 |
| MS.gene039181.t1 | MTR_7g065750 | 42.857 | 210 | 112 | 6 | 3 | 208 | 6 | 211 | 1.44e-45 | 151 |
| MS.gene039181.t1 | MTR_4g059730 | 40.465 | 215 | 119 | 5 | 1 | 210 | 1 | 211 | 4.34e-45 | 150 |
| MS.gene039181.t1 | MTR_7g065630 | 40.758 | 211 | 114 | 6 | 3 | 210 | 24 | 226 | 1.16e-44 | 149 |
| MS.gene039181.t1 | MTR_1g090090 | 42.180 | 211 | 115 | 5 | 4 | 210 | 3 | 210 | 2.13e-44 | 148 |
| MS.gene039181.t1 | MTR_7g065740 | 40.566 | 212 | 118 | 6 | 3 | 210 | 6 | 213 | 6.75e-44 | 147 |
| MS.gene039181.t1 | MTR_4g019780 | 39.048 | 210 | 123 | 3 | 3 | 210 | 7 | 213 | 2.40e-43 | 145 |
| MS.gene039181.t1 | MTR_1g090070 | 38.605 | 215 | 120 | 6 | 4 | 211 | 9 | 218 | 6.63e-43 | 144 |
| MS.gene039181.t1 | MTR_1g090150 | 35.909 | 220 | 133 | 5 | 3 | 218 | 2 | 217 | 1.00e-42 | 144 |
| MS.gene039181.t1 | MTR_7g065710 | 38.028 | 213 | 121 | 6 | 1 | 210 | 1 | 205 | 1.32e-42 | 143 |
| MS.gene039181.t1 | MTR_5g040430 | 34.667 | 225 | 135 | 4 | 2 | 219 | 5 | 224 | 1.49e-42 | 143 |
| MS.gene039181.t1 | MTR_6g080440 | 40.000 | 195 | 112 | 3 | 18 | 210 | 17 | 208 | 2.83e-42 | 142 |
| MS.gene039181.t1 | MTR_4g019790 | 40.476 | 210 | 118 | 5 | 4 | 210 | 7 | 212 | 9.04e-41 | 139 |
| MS.gene039181.t1 | MTR_7g065590 | 40.094 | 212 | 118 | 7 | 3 | 210 | 6 | 212 | 2.34e-40 | 138 |
| MS.gene039181.t1 | MTR_7g065290 | 41.038 | 212 | 116 | 7 | 3 | 210 | 6 | 212 | 2.70e-40 | 137 |
| MS.gene039181.t1 | MTR_7g065230 | 40.476 | 210 | 115 | 6 | 3 | 210 | 6 | 207 | 6.14e-40 | 136 |
| MS.gene039181.t1 | MTR_7g065680 | 38.498 | 213 | 120 | 6 | 1 | 210 | 4 | 208 | 1.28e-39 | 135 |
| MS.gene039181.t1 | MTR_7g065270 | 40.094 | 212 | 118 | 7 | 3 | 210 | 6 | 212 | 2.25e-39 | 135 |
| MS.gene039181.t1 | MTR_7g065700 | 39.437 | 213 | 118 | 6 | 1 | 210 | 4 | 208 | 2.43e-39 | 135 |
| MS.gene039181.t1 | MTR_8g061950 | 35.135 | 222 | 131 | 3 | 4 | 215 | 5 | 223 | 3.67e-39 | 135 |
| MS.gene039181.t1 | MTR_7g065265 | 39.151 | 212 | 120 | 7 | 3 | 210 | 6 | 212 | 1.05e-37 | 131 |
| MS.gene039181.t1 | MTR_1g115195 | 38.756 | 209 | 120 | 5 | 4 | 207 | 3 | 208 | 1.78e-37 | 130 |
| MS.gene039181.t1 | MTR_7g065640 | 36.842 | 209 | 111 | 5 | 3 | 210 | 6 | 194 | 5.89e-37 | 128 |
| MS.gene039181.t1 | MTR_7g065600 | 37.915 | 211 | 124 | 6 | 3 | 210 | 6 | 212 | 1.10e-36 | 128 |
| MS.gene039181.t1 | MTR_7g065260 | 41.667 | 204 | 110 | 7 | 3 | 202 | 13 | 211 | 1.19e-32 | 118 |
| MS.gene039181.t1 | MTR_2g072120 | 59.459 | 74 | 29 | 1 | 49 | 121 | 1 | 74 | 5.83e-27 | 99.0 |
| MS.gene039181.t1 | MTR_4g134380 | 30.047 | 213 | 130 | 8 | 4 | 204 | 15 | 220 | 2.02e-15 | 72.8 |
| MS.gene039181.t1 | MTR_4g134370 | 29.493 | 217 | 124 | 7 | 4 | 203 | 15 | 219 | 1.16e-14 | 70.9 |
| MS.gene039181.t1 | MTR_4g134380 | 31.707 | 164 | 97 | 6 | 4 | 155 | 15 | 175 | 1.13e-12 | 64.3 |
| MS.gene039181.t1 | MTR_7g100320 | 30.000 | 200 | 123 | 9 | 14 | 207 | 36 | 224 | 1.34e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039181.t1 | AT1G17180 | 63.348 | 221 | 79 | 1 | 1 | 221 | 1 | 219 | 2.77e-103 | 298 |
| MS.gene039181.t1 | AT1G78360 | 60.633 | 221 | 86 | 1 | 1 | 221 | 1 | 220 | 4.49e-98 | 285 |
| MS.gene039181.t1 | AT1G78380 | 61.111 | 216 | 82 | 1 | 1 | 216 | 1 | 214 | 8.75e-98 | 284 |
| MS.gene039181.t1 | AT1G78340 | 60.000 | 220 | 86 | 1 | 1 | 220 | 1 | 218 | 7.71e-97 | 281 |
| MS.gene039181.t1 | AT1G17170 | 60.633 | 221 | 84 | 2 | 1 | 221 | 1 | 218 | 1.98e-96 | 280 |
| MS.gene039181.t1 | AT1G78370 | 59.259 | 216 | 86 | 1 | 1 | 216 | 1 | 214 | 3.10e-94 | 275 |
| MS.gene039181.t1 | AT1G78320 | 59.009 | 222 | 88 | 2 | 1 | 221 | 1 | 220 | 9.53e-93 | 271 |
| MS.gene039181.t1 | AT1G17190 | 54.128 | 218 | 98 | 1 | 2 | 219 | 3 | 218 | 1.09e-87 | 258 |
| MS.gene039181.t1 | AT1G53680 | 53.153 | 222 | 100 | 3 | 2 | 221 | 5 | 224 | 2.42e-85 | 252 |
| MS.gene039181.t1 | AT3G43800 | 53.810 | 210 | 93 | 3 | 3 | 209 | 4 | 212 | 9.73e-76 | 228 |
| MS.gene039181.t1 | AT1G78320 | 50.450 | 222 | 80 | 3 | 1 | 221 | 1 | 193 | 6.29e-71 | 214 |
| MS.gene039181.t1 | AT2G29420 | 39.423 | 208 | 119 | 5 | 2 | 206 | 7 | 210 | 3.47e-49 | 160 |
| MS.gene039181.t1 | AT2G29490 | 39.810 | 211 | 119 | 5 | 3 | 209 | 6 | 212 | 1.62e-47 | 156 |
| MS.gene039181.t1 | AT3G09270 | 40.284 | 211 | 121 | 3 | 1 | 207 | 1 | 210 | 2.50e-47 | 155 |
| MS.gene039181.t1 | AT2G29440 | 39.631 | 217 | 123 | 5 | 2 | 214 | 4 | 216 | 3.82e-47 | 155 |
| MS.gene039181.t1 | AT2G29480 | 39.810 | 211 | 119 | 5 | 3 | 209 | 6 | 212 | 5.73e-47 | 155 |
| MS.gene039181.t1 | AT1G59700 | 41.364 | 220 | 120 | 5 | 3 | 214 | 5 | 223 | 9.38e-47 | 154 |
| MS.gene039181.t1 | AT2G29470 | 38.785 | 214 | 124 | 5 | 5 | 214 | 8 | 218 | 1.26e-46 | 154 |
| MS.gene039181.t1 | AT1G10360 | 41.284 | 218 | 118 | 5 | 2 | 211 | 3 | 218 | 2.70e-45 | 150 |
| MS.gene039181.t1 | AT1G69930 | 39.908 | 218 | 121 | 5 | 2 | 211 | 9 | 224 | 2.76e-45 | 150 |
| MS.gene039181.t1 | AT2G29450 | 41.038 | 212 | 116 | 6 | 3 | 209 | 5 | 212 | 3.94e-45 | 150 |
| MS.gene039181.t1 | AT2G29460 | 37.441 | 211 | 124 | 5 | 3 | 209 | 6 | 212 | 9.24e-44 | 146 |
| MS.gene039181.t1 | AT1G27130 | 35.945 | 217 | 132 | 3 | 2 | 211 | 4 | 220 | 1.40e-43 | 146 |
| MS.gene039181.t1 | AT1G59670 | 40.741 | 216 | 119 | 5 | 3 | 210 | 5 | 219 | 1.17e-42 | 144 |
| MS.gene039181.t1 | AT1G10370 | 38.222 | 225 | 115 | 5 | 2 | 211 | 3 | 218 | 2.99e-41 | 140 |
| MS.gene039181.t1 | AT1G27140 | 37.788 | 217 | 127 | 4 | 2 | 210 | 4 | 220 | 1.21e-40 | 139 |
| MS.gene039181.t1 | AT1G69920 | 35.023 | 217 | 134 | 3 | 2 | 211 | 32 | 248 | 6.91e-39 | 135 |
| MS.gene039181.t1 | AT1G74590 | 31.839 | 223 | 136 | 4 | 4 | 216 | 7 | 223 | 2.93e-37 | 130 |
| MS.gene039181.t1 | AT5G62480 | 33.772 | 228 | 137 | 4 | 1 | 217 | 5 | 229 | 7.48e-36 | 127 |
| MS.gene039181.t1 | AT5G62480 | 27.632 | 228 | 125 | 5 | 1 | 217 | 5 | 203 | 3.04e-19 | 82.8 |
| MS.gene039181.t1 | AT5G62480 | 27.632 | 228 | 124 | 5 | 1 | 217 | 5 | 202 | 3.27e-19 | 82.8 |
Find 34 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGATCACAAGCTTTATTT+TGG | 0.128170 | 2.1:+28346496 | MS.gene039181:CDS |
| TTAGGAGACAGGTCTTATTT+TGG | 0.225057 | 2.1:+28351144 | MS.gene039181:CDS |
| AAGAATAACTTCATCGTTCA+TGG | 0.282607 | 2.1:-28346217 | None:intergenic |
| TTCAATATATCGATGAAGTT+TGG | 0.309668 | 2.1:+28346436 | MS.gene039181:CDS |
| TTAAAAGTTTACGAGACTTT+TGG | 0.332475 | 2.1:+28351219 | MS.gene039181:CDS |
| TAGAATAGCACTTGCTGAAA+AGG | 0.393176 | 2.1:+28346275 | MS.gene039181:CDS |
| ATCCCGGTTCTCATTCATAA+TGG | 0.397020 | 2.1:+28346384 | MS.gene039181:CDS |
| CATAGATACTCTCAAATTGT+TGG | 0.415288 | 2.1:+28351113 | MS.gene039181:CDS |
| AGCAATTAAAGATTCACAAA+TGG | 0.421376 | 2.1:-28346412 | None:intergenic |
| GGCTGATTATATTGATAAGA+AGG | 0.427339 | 2.1:+28346518 | MS.gene039181:CDS |
| GCAATTAAAGATTCACAAAT+GGG | 0.429408 | 2.1:-28346411 | None:intergenic |
| TTTCCATTATGAATGAGAAC+CGG | 0.434464 | 2.1:-28346387 | None:intergenic |
| ATTCTAACTCTTATTCCAAA+TGG | 0.434839 | 2.1:-28346258 | None:intergenic |
| TCATAGATCTTATCCTGGTC+TGG | 0.437429 | 2.1:-28351327 | None:intergenic |
| TTAGCCCAAGCACTGAACTT+AGG | 0.461394 | 2.1:-28351267 | None:intergenic |
| AAAGCTTGTGATCTCTGATA+AGG | 0.463565 | 2.1:-28346489 | None:intergenic |
| TAAGATCTATGAGTTCACTA+TGG | 0.474017 | 2.1:+28351338 | MS.gene039181:CDS |
| ACTCTTATTCCAAATGGACT+TGG | 0.492009 | 2.1:-28346252 | None:intergenic |
| TTCCATTATGAATGAGAACC+GGG | 0.508048 | 2.1:-28346386 | None:intergenic |
| GTGTCCTAAGTTCAGTGCTT+GGG | 0.509346 | 2.1:+28351263 | MS.gene039181:CDS |
| AGAATAGCACTTGCTGAAAA+GGG | 0.509475 | 2.1:+28346276 | MS.gene039181:CDS |
| TTCCAAGTCTCTTCCAGACC+AGG | 0.513298 | 2.1:+28351314 | MS.gene039181:CDS |
| AGTGTCCTAAGTTCAGTGCT+TGG | 0.513768 | 2.1:+28351262 | MS.gene039181:CDS |
| AAATTGTTGGAGGATCAGTT+AGG | 0.522499 | 2.1:+28351126 | MS.gene039181:CDS |
| TGGAGGATCAGTTAGGAGAC+AGG | 0.536630 | 2.1:+28351133 | MS.gene039181:CDS |
| ATCCTGGTCTGGAAGAGACT+TGG | 0.541643 | 2.1:-28351316 | None:intergenic |
| CCCGGTTCAGAAGAAAATCC+CGG | 0.547882 | 2.1:+28346368 | MS.gene039181:CDS |
| AGATACTCTCAAATTGTTGG+AGG | 0.557191 | 2.1:+28351116 | MS.gene039181:CDS |
| GATCTCTGATAAGGATCAGA+AGG | 0.596783 | 2.1:-28346480 | None:intergenic |
| TGAACTCATAGATCTTATCC+TGG | 0.599599 | 2.1:-28351332 | None:intergenic |
| TAAGGATCAGAAGGCAACAA+AGG | 0.613337 | 2.1:-28346471 | None:intergenic |
| AGTTCACTATGGACATGAGA+AGG | 0.614859 | 2.1:+28351349 | MS.gene039181:CDS |
| GGGTTCATTTCTAGCAACAA+AGG | 0.636391 | 2.1:-28346348 | None:intergenic |
| TTTGTTGCTAGAAATGAACC+CGG | 0.654424 | 2.1:+28346350 | MS.gene039181:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATCAATAAAAAAAACTA+TGG | - | chr2.1:28346578-28346597 | None:intergenic | 10.0% |
| !!! | TAGTTTTTTTTATTGATTAT+TGG | + | chr2.1:28346578-28346597 | MS.gene039181:intron | 10.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr2.1:28350650-28350669 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr2.1:28350649-28350668 | MS.gene039181:intron | 15.0% |
| !! | AGTTATAATCATATAGAATA+TGG | + | chr2.1:28348216-28348235 | MS.gene039181:intron | 15.0% |
| !! | ATCTAAAAATAAAGACATAT+AGG | + | chr2.1:28349772-28349791 | MS.gene039181:intron | 15.0% |
| !! | ATGCTTATCATAATAAATTA+AGG | - | chr2.1:28349038-28349057 | None:intergenic | 15.0% |
| !! | TATGATTATTAAATCAACAA+AGG | - | chr2.1:28348724-28348743 | None:intergenic | 15.0% |
| !! | TCTAAAAATAAAGACATATA+GGG | + | chr2.1:28349773-28349792 | MS.gene039181:intron | 15.0% |
| !! | TGCTTATCATAATAAATTAA+GGG | - | chr2.1:28349037-28349056 | None:intergenic | 15.0% |
| !!! | ACTTTTTAGATTTATTCAAT+TGG | + | chr2.1:28351036-28351055 | MS.gene039181:intron | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | - | chr2.1:28350523-28350542 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr2.1:28350626-28350645 | None:intergenic | 15.0% |
| !!! | TTTCTCTTATAGTTTTTTTT+AGG | - | chr2.1:28346911-28346930 | None:intergenic | 15.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr2.1:28350640-28350659 | MS.gene039181:intron | 20.0% |
| !! | AAGAACATTTATACCAAAAA+AGG | + | chr2.1:28351060-28351079 | MS.gene039181:CDS | 20.0% |
| !! | AAGATATAATTATGCTTCTT+CGG | + | chr2.1:28348485-28348504 | MS.gene039181:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr2.1:28350683-28350702 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr2.1:28350563-28350582 | None:intergenic | 20.0% |
| !! | ATCATAATAAATTAAGGGTA+TGG | - | chr2.1:28349032-28349051 | None:intergenic | 20.0% |
| !! | TATGATAGCATTTATTAATC+TGG | - | chr2.1:28350450-28350469 | None:intergenic | 20.0% |
| !! | TTATTGTTAATAGACTCTAA+CGG | - | chr2.1:28349880-28349899 | None:intergenic | 20.0% |
| !! | TTCTTAGAATGGAATTAATT+AGG | + | chr2.1:28349800-28349819 | MS.gene039181:intron | 20.0% |
| !! | TTTATCTCAAACTGAAAATT+GGG | - | chr2.1:28348048-28348067 | None:intergenic | 20.0% |
| !!! | AAGTTATTCTTCTAGATTTT+TGG | + | chr2.1:28346229-28346248 | MS.gene039181:CDS | 20.0% |
| !!! | ATAATACTTTGTTTTCTATG+TGG | - | chr2.1:28349120-28349139 | None:intergenic | 20.0% |
| !!! | ATATTTGTTAGTAATATGTC+AGG | + | chr2.1:28350862-28350881 | MS.gene039181:intron | 20.0% |
| !!! | GATTTTATTTCTTTCTGATT+TGG | - | chr2.1:28349201-28349220 | None:intergenic | 20.0% |
| !!! | TTAGTCTGAATTTTAGTATA+CGG | + | chr2.1:28347555-28347574 | MS.gene039181:intron | 20.0% |
| !!! | TTATTTTTAGATGTTGATGA+GGG | - | chr2.1:28349764-28349783 | None:intergenic | 20.0% |
| !!! | TTTAATTTATCATATCTTGC+AGG | - | chr2.1:28350775-28350794 | None:intergenic | 20.0% |
| !!! | TTTAGAAGATTAGTCTTATA+TGG | - | chr2.1:28350040-28350059 | None:intergenic | 20.0% |
| !!! | TTTATTGATTATTGGAAATG+TGG | + | chr2.1:28346586-28346605 | MS.gene039181:intron | 20.0% |
| !!! | TTTATTTTTAGATGTTGATG+AGG | - | chr2.1:28349765-28349784 | None:intergenic | 20.0% |
| !!! | TTTTATCTCAAACTGAAAAT+TGG | - | chr2.1:28348049-28348068 | None:intergenic | 20.0% |
| !!! | TTTTCACTTCTTACTATATA+AGG | - | chr2.1:28350005-28350024 | None:intergenic | 20.0% |
| ! | AAATAGACTTCATATTCCAT+AGG | + | chr2.1:28350101-28350120 | MS.gene039181:intron | 25.0% |
| ! | AACAGAAATGTCAATATATG+AGG | - | chr2.1:28349835-28349854 | None:intergenic | 25.0% |
| ! | AATAGAGGTTATGAGATTAA+GGG | - | chr2.1:28349635-28349654 | None:intergenic | 25.0% |
| ! | AATTCTAACTGGTTAGTATT+TGG | - | chr2.1:28348086-28348105 | None:intergenic | 25.0% |
| ! | AGAAGCTTCAATTCATATTA+AGG | - | chr2.1:28347914-28347933 | None:intergenic | 25.0% |
| ! | AGCAATTAAAGATTCACAAA+TGG | - | chr2.1:28346415-28346434 | None:intergenic | 25.0% |
| ! | ATTAACATAGGACAAATACT+AGG | + | chr2.1:28348103-28348122 | MS.gene039181:intron | 25.0% |
| ! | ATTATAAAGAGAATCCATAC+AGG | + | chr2.1:28347647-28347666 | MS.gene039181:intron | 25.0% |
| ! | ATTCTAACTCTTATTCCAAA+TGG | - | chr2.1:28346261-28346280 | None:intergenic | 25.0% |
| ! | ATTCTAACTGGTTAGTATTT+GGG | - | chr2.1:28348085-28348104 | None:intergenic | 25.0% |
| ! | ATTGTTTGACCATTATGTAA+AGG | + | chr2.1:28347936-28347955 | MS.gene039181:intron | 25.0% |
| ! | CATCTAAATCTTTGTCAAAT+AGG | + | chr2.1:28350399-28350418 | MS.gene039181:intron | 25.0% |
| ! | CCATAATGAAAATCATATCA+AGG | + | chr2.1:28348421-28348440 | MS.gene039181:intron | 25.0% |
| ! | GCAATTAAAGATTCACAAAT+GGG | - | chr2.1:28346414-28346433 | None:intergenic | 25.0% |
| ! | GGAACAATTTAATGACAAAA+AGG | - | chr2.1:28348854-28348873 | None:intergenic | 25.0% |
| ! | GGAGAGATATAAATCATAAT+AGG | + | chr2.1:28347791-28347810 | MS.gene039181:intron | 25.0% |
| ! | GTCAAATAGGAAAACTTTAA+GGG | + | chr2.1:28350412-28350431 | MS.gene039181:intron | 25.0% |
| ! | TAAAATTCAGACTAAAGAAG+TGG | - | chr2.1:28347550-28347569 | None:intergenic | 25.0% |
| ! | TAACCAGTTAGAATTAACAT+AGG | + | chr2.1:28348091-28348110 | MS.gene039181:intron | 25.0% |
| ! | TAATGAGTTTGATAGAAATG+TGG | + | chr2.1:28346953-28346972 | MS.gene039181:intron | 25.0% |
| ! | TATAGGGATATTTCTTAGAA+TGG | + | chr2.1:28349789-28349808 | MS.gene039181:intron | 25.0% |
| ! | TGTCAAATAGGAAAACTTTA+AGG | + | chr2.1:28350411-28350430 | MS.gene039181:intron | 25.0% |
| ! | TGTGATAATCTTCCAAAAAT+TGG | + | chr2.1:28346706-28346725 | MS.gene039181:intron | 25.0% |
| ! | TTAATCTCATAACCTCTATT+CGG | + | chr2.1:28349635-28349654 | MS.gene039181:intron | 25.0% |
| ! | TTATCTCAAACTGAAAATTG+GGG | - | chr2.1:28348047-28348066 | None:intergenic | 25.0% |
| ! | TTCAATATATCGATGAAGTT+TGG | + | chr2.1:28346436-28346455 | MS.gene039181:CDS | 25.0% |
| ! | TTGTGTTAGTTAGTTAAATC+TGG | - | chr2.1:28349443-28349462 | None:intergenic | 25.0% |
| !! | AAGTCTCGTAAACTTTTAAT+CGG | - | chr2.1:28351218-28351237 | None:intergenic | 25.0% |
| !! | AGAAAATGGTTTGGATTTAT+AGG | + | chr2.1:28348912-28348931 | MS.gene039181:intron | 25.0% |
| !! | CCTTGATATGATTTTCATTA+TGG | - | chr2.1:28348424-28348443 | None:intergenic | 25.0% |
| !! | CTAGGATTTTATTAAATTGC+AGG | + | chr2.1:28348121-28348140 | MS.gene039181:intron | 25.0% |
| !! | CTTAGTGTTTTATCACTAAA+AGG | + | chr2.1:28347363-28347382 | MS.gene039181:intron | 25.0% |
| !! | CTTATGACACTCTTTTTATT+GGG | - | chr2.1:28350146-28350165 | None:intergenic | 25.0% |
| !! | GAAAATGGTTTGGATTTATA+GGG | + | chr2.1:28348913-28348932 | MS.gene039181:intron | 25.0% |
| !! | GAAGAAGCATAATTATATCT+TGG | - | chr2.1:28348486-28348505 | None:intergenic | 25.0% |
| !! | GATTTTATTAAATTGCAGGT+GGG | + | chr2.1:28348125-28348144 | MS.gene039181:intron | 25.0% |
| !! | TATTTCTAAACTATTGCTCA+AGG | - | chr2.1:28350956-28350975 | None:intergenic | 25.0% |
| !! | TCCAAATAGAAGCATAATAT+GGG | + | chr2.1:28349226-28349245 | MS.gene039181:intron | 25.0% |
| !! | TCTTATGACACTCTTTTTAT+TGG | - | chr2.1:28350147-28350166 | None:intergenic | 25.0% |
| !! | TGGAATATGAAGTCTATTTT+TGG | - | chr2.1:28350100-28350119 | None:intergenic | 25.0% |
| !! | TGTTTTCTATGTGGTTTATT+AGG | - | chr2.1:28349111-28349130 | None:intergenic | 25.0% |
| !! | TTAAAAGTTTACGAGACTTT+TGG | + | chr2.1:28351219-28351238 | MS.gene039181:CDS | 25.0% |
| !! | TTAGTTACTTTCTTCATGTT+AGG | + | chr2.1:28346614-28346633 | MS.gene039181:intron | 25.0% |
| !! | TTATGACACTCTTTTTATTG+GGG | - | chr2.1:28350145-28350164 | None:intergenic | 25.0% |
| !! | TTTATTCCTCTTCTTTCTTT+TGG | + | chr2.1:28347321-28347340 | MS.gene039181:intron | 25.0% |
| !!! | GTTAGCTTTGAAAGATATTT+GGG | - | chr2.1:28347892-28347911 | None:intergenic | 25.0% |
| !!! | TATTTCTTTCTGATTTGGAT+TGG | - | chr2.1:28349196-28349215 | None:intergenic | 25.0% |
| AAGCATTATCCTACTAAGTA+CGG | - | chr2.1:28347022-28347041 | None:intergenic | 30.0% | |
| AATCAACAAAGGTTCATTCA+TGG | - | chr2.1:28348713-28348732 | None:intergenic | 30.0% | |
| AATTTGGATTCTCAATAGTC+AGG | + | chr2.1:28347074-28347093 | MS.gene039181:intron | 30.0% | |
| ACCTATAATTGAAAAGATGG+TGG | + | chr2.1:28346794-28346813 | MS.gene039181:intron | 30.0% | |
| ACTATTAATCACAACAATCC+TGG | - | chr2.1:28348946-28348965 | None:intergenic | 30.0% | |
| ACTGAAAATGCATATCTGAT+AGG | - | chr2.1:28347268-28347287 | None:intergenic | 30.0% | |
| ACTGTTAACATTGACATTAG+AGG | - | chr2.1:28348254-28348273 | None:intergenic | 30.0% | |
| AGAACAAGAAGTTGCAAAAA+AGG | + | chr2.1:28351086-28351105 | MS.gene039181:CDS | 30.0% | |
| AGCACCTATAATTGAAAAGA+TGG | + | chr2.1:28346791-28346810 | MS.gene039181:intron | 30.0% | |
| AGTGAGAAAATAGTCAGTAT+TGG | + | chr2.1:28350976-28350995 | MS.gene039181:intron | 30.0% | |
| AGTTTGGGCATATAAATTTG+TGG | + | chr2.1:28346832-28346851 | MS.gene039181:intron | 30.0% | |
| ATAACAAACCATATCACTCA+AGG | + | chr2.1:28349670-28349689 | MS.gene039181:intron | 30.0% | |
| ATACACTGATAATAGTTCCT+TGG | + | chr2.1:28349333-28349352 | MS.gene039181:intron | 30.0% | |
| ATAGGAATGTAACTCAAGAA+TGG | - | chr2.1:28350188-28350207 | None:intergenic | 30.0% | |
| ATCAACAAAGGTTCATTCAT+GGG | - | chr2.1:28348712-28348731 | None:intergenic | 30.0% | |
| ATCTTAATCGAAGAACCTAT+TGG | - | chr2.1:28350259-28350278 | None:intergenic | 30.0% | |
| ATGCATTACCATATCAGTAT+TGG | + | chr2.1:28348558-28348577 | MS.gene039181:intron | 30.0% | |
| ATTCCTTTGGATTGAATCAA+AGG | - | chr2.1:28349710-28349729 | None:intergenic | 30.0% | |
| ATTTGGATTCTCAATAGTCA+GGG | + | chr2.1:28347075-28347094 | MS.gene039181:intron | 30.0% | |
| CAAAAATTGGATATGTGGTA+AGG | + | chr2.1:28346719-28346738 | MS.gene039181:intron | 30.0% | |
| CAAATAAGCAAAAACCTGTA+TGG | - | chr2.1:28347664-28347683 | None:intergenic | 30.0% | |
| CAGATTTAAGCACATGTTTA+GGG | + | chr2.1:28349058-28349077 | MS.gene039181:intron | 30.0% | |
| CATAGATACTCTCAAATTGT+TGG | + | chr2.1:28351113-28351132 | MS.gene039181:CDS | 30.0% | |
| CATATTATGCTTCTATTTGG+AGG | - | chr2.1:28349227-28349246 | None:intergenic | 30.0% | |
| CATTAGTGTAGAAAATGGTT+TGG | + | chr2.1:28348903-28348922 | MS.gene039181:intron | 30.0% | |
| CCTATAATTGAAAAGATGGT+GGG | + | chr2.1:28346795-28346814 | MS.gene039181:intron | 30.0% | |
| CTGAAAATGCATATCTGATA+GGG | - | chr2.1:28347267-28347286 | None:intergenic | 30.0% | |
| GAATAGAGGTTATGAGATTA+AGG | - | chr2.1:28349636-28349655 | None:intergenic | 30.0% | |
| GAATTAAGCTTAGGTAGTTT+GGG | + | chr2.1:28346817-28346836 | MS.gene039181:intron | 30.0% | |
| GGCTGATTATATTGATAAGA+AGG | + | chr2.1:28346518-28346537 | MS.gene039181:CDS | 30.0% | |
| GTTAAATCTGGTCCTATAAA+AGG | - | chr2.1:28349431-28349450 | None:intergenic | 30.0% | |
| TAAGATCTATGAGTTCACTA+TGG | + | chr2.1:28351338-28351357 | MS.gene039181:CDS | 30.0% | |
| TACACTGATAATAGTTCCTT+GGG | + | chr2.1:28349334-28349353 | MS.gene039181:intron | 30.0% | |
| TATACGAACCAATACTGATA+TGG | - | chr2.1:28348569-28348588 | None:intergenic | 30.0% | |
| TATCTCAAACTGAAAATTGG+GGG | - | chr2.1:28348046-28348065 | None:intergenic | 30.0% | |
| TATTGCTAGTTAGAATAGCT+TGG | + | chr2.1:28348762-28348781 | MS.gene039181:intron | 30.0% | |
| TATTGGTGAAAATCCTTAGA+AGG | - | chr2.1:28349924-28349943 | None:intergenic | 30.0% | |
| TCAGATTTAAGCACATGTTT+AGG | + | chr2.1:28349057-28349076 | MS.gene039181:intron | 30.0% | |
| TCCCATATTATGCTTCTATT+TGG | - | chr2.1:28349230-28349249 | None:intergenic | 30.0% | |
| TCTTAATCGAAGAACCTATT+GGG | - | chr2.1:28350258-28350277 | None:intergenic | 30.0% | |
| TCTTCCAAAAATTGGATATG+TGG | + | chr2.1:28346714-28346733 | MS.gene039181:intron | 30.0% | |
| TGAAAATGCATATCTGATAG+GGG | - | chr2.1:28347266-28347285 | None:intergenic | 30.0% | |
| TGCAACATTAGTGTAGAAAA+TGG | + | chr2.1:28348898-28348917 | MS.gene039181:intron | 30.0% | |
| TGTCCTATGTTAATTCTAAC+TGG | - | chr2.1:28348097-28348116 | None:intergenic | 30.0% | |
| TTCCTTTGGATTGAATCAAA+GGG | - | chr2.1:28349709-28349728 | None:intergenic | 30.0% | |
| TTCTAACTGGTTAGTATTTG+GGG | - | chr2.1:28348084-28348103 | None:intergenic | 30.0% | |
| TTTCCATTATGAATGAGAAC+CGG | - | chr2.1:28346390-28346409 | None:intergenic | 30.0% | |
| ! | ATGAGATTAAGGGTCTTTTA+GGG | - | chr2.1:28349625-28349644 | None:intergenic | 30.0% |
| ! | ATTTGCTAAGCTAAATATGC+AGG | - | chr2.1:28348875-28348894 | None:intergenic | 30.0% |
| ! | CACTAACAGTTTCCTTTTAT+AGG | + | chr2.1:28349416-28349435 | MS.gene039181:intron | 30.0% |
| ! | CTCCAAATAGAAGCATAATA+TGG | + | chr2.1:28349225-28349244 | MS.gene039181:intron | 30.0% |
| ! | CTTACCACATATCCAATTTT+TGG | - | chr2.1:28346721-28346740 | None:intergenic | 30.0% |
| ! | CTTTTGCTTTCAAAGTATGT+AGG | + | chr2.1:28348791-28348810 | MS.gene039181:intron | 30.0% |
| ! | GATATGCATTTTCAGTGATT+TGG | + | chr2.1:28347272-28347291 | MS.gene039181:intron | 30.0% |
| ! | GGATTTTATTAAATTGCAGG+TGG | + | chr2.1:28348124-28348143 | MS.gene039181:intron | 30.0% |
| ! | TATGAGATTAAGGGTCTTTT+AGG | - | chr2.1:28349626-28349645 | None:intergenic | 30.0% |
| ! | TCATTTTACCAAGCATTTCT+TGG | - | chr2.1:28347825-28347844 | None:intergenic | 30.0% |
| ! | TTGAGTAGCTTCTTTTACAT+TGG | + | chr2.1:28346674-28346693 | MS.gene039181:intron | 30.0% |
| ! | TTTTCTCTTGAGTAAGGTTT+TGG | - | chr2.1:28349570-28349589 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr2.1:28350732-28350751 | MS.gene039181:intron | 30.0% |
| !! | GGTTAGCTTTGAAAGATATT+TGG | - | chr2.1:28347893-28347912 | None:intergenic | 30.0% |
| !! | TATTTTGGAGGAGACAAATT+TGG | + | chr2.1:28351159-28351178 | MS.gene039181:CDS | 30.0% |
| !! | TTCTAAGGATTTTCACCAAT+AGG | + | chr2.1:28349923-28349942 | MS.gene039181:intron | 30.0% |
| !!! | ACTGCCTAATTTTGATTGAA+TGG | + | chr2.1:28347183-28347202 | MS.gene039181:intron | 30.0% |
| !!! | AGAGATCACAAGCTTTATTT+TGG | + | chr2.1:28346496-28346515 | MS.gene039181:CDS | 30.0% |
| !!! | GAGATCACAAGCTTTATTTT+GGG | + | chr2.1:28346497-28346516 | MS.gene039181:CDS | 30.0% |
| !!! | TAAAAGTCTGAGTTTTAGAC+TGG | + | chr2.1:28350359-28350378 | MS.gene039181:intron | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr2.1:28350731-28350750 | None:intergenic | 30.0% |
| !!! | TTCTTGTTCTTCTCCTTTTT+TGG | - | chr2.1:28351076-28351095 | None:intergenic | 30.0% |
| !!! | TTTTTGGTGCTTCAAGTAAT+TGG | - | chr2.1:28350084-28350103 | None:intergenic | 30.0% |
| AAAGCTTGTGATCTCTGATA+AGG | - | chr2.1:28346492-28346511 | None:intergenic | 35.0% | |
| AAATACTTGAGCGTACCTAT+TGG | - | chr2.1:28349941-28349960 | None:intergenic | 35.0% | |
| AAATTGTTGGAGGATCAGTT+AGG | + | chr2.1:28351126-28351145 | MS.gene039181:CDS | 35.0% | |
| AACAATAGAACTGTCCAAAC+AGG | - | chr2.1:28348515-28348534 | None:intergenic | 35.0% | |
| AACTTCTGCCTTTAGGTAAT+TGG | + | chr2.1:28347847-28347866 | MS.gene039181:intron | 35.0% | |
| AAGGATAGTAGATCAAATGG+AGG | + | chr2.1:28346856-28346875 | MS.gene039181:intron | 35.0% | |
| AAGTACATACATGCCTTCTA+AGG | + | chr2.1:28349908-28349927 | MS.gene039181:intron | 35.0% | |
| AATATCCCTTGTACTGTTAG+AGG | - | chr2.1:28347605-28347624 | None:intergenic | 35.0% | |
| AATGAGAAACTTCTGCCTTT+AGG | + | chr2.1:28347840-28347859 | MS.gene039181:intron | 35.0% | |
| AATTCAGACTAAAGAAGTGG+TGG | - | chr2.1:28347547-28347566 | None:intergenic | 35.0% | |
| ACACTGTTAGAGATAGAGTT+GGG | + | chr2.1:28346766-28346785 | MS.gene039181:intron | 35.0% | |
| ACTCTGAATTTGAGAGTTAC+CGG | - | chr2.1:28348186-28348205 | None:intergenic | 35.0% | |
| AGAATCCAAATTCCTGATTG+GGG | - | chr2.1:28347066-28347085 | None:intergenic | 35.0% | |
| AGAATGCTCATTGAGTAACT+TGG | - | chr2.1:28347975-28347994 | None:intergenic | 35.0% | |
| AGATACTCTCAAATTGTTGG+AGG | + | chr2.1:28351116-28351135 | MS.gene039181:CDS | 35.0% | |
| AGCTACAAAGAAGATTCCTT+TGG | - | chr2.1:28349723-28349742 | None:intergenic | 35.0% | |
| AGGATAGTAGATCAAATGGA+GGG | + | chr2.1:28346857-28346876 | MS.gene039181:intron | 35.0% | |
| ATATCCCTTGTACTGTTAGA+GGG | - | chr2.1:28347604-28347623 | None:intergenic | 35.0% | |
| ATGCTAGGAAGTTAGGATAT+AGG | - | chr2.1:28350206-28350225 | None:intergenic | 35.0% | |
| CAACAAATACGACCTTACTA+TGG | - | chr2.1:28349282-28349301 | None:intergenic | 35.0% | |
| CAGATCATGAAGAAGGTTAA+TGG | - | chr2.1:28347407-28347426 | None:intergenic | 35.0% | |
| CATAGTAAGGTCGTATTTGT+TGG | + | chr2.1:28349280-28349299 | MS.gene039181:intron | 35.0% | |
| CTAGAAAAATCAGACCAAAG+AGG | - | chr2.1:28347754-28347773 | None:intergenic | 35.0% | |
| CTCAAAAATGCTAGGAAGTT+AGG | - | chr2.1:28350213-28350232 | None:intergenic | 35.0% | |
| CTGTTAGAGGGATTAAAGAA+CGG | - | chr2.1:28347592-28347611 | None:intergenic | 35.0% | |
| GAAAATGCATATCTGATAGG+GGG | - | chr2.1:28347265-28347284 | None:intergenic | 35.0% | |
| GAATGCTCATTGAGTAACTT+GGG | - | chr2.1:28347974-28347993 | None:intergenic | 35.0% | |
| GAGAATCCAAATTCCTGATT+GGG | - | chr2.1:28347067-28347086 | None:intergenic | 35.0% | |
| GATACTCCAAAAGAAAGAAG+AGG | - | chr2.1:28347330-28347349 | None:intergenic | 35.0% | |
| GATTTATAGGGACAATTTCC+AGG | + | chr2.1:28348925-28348944 | MS.gene039181:intron | 35.0% | |
| GGAATTAAGCTTAGGTAGTT+TGG | + | chr2.1:28346816-28346835 | MS.gene039181:intron | 35.0% | |
| GGGCATATAAATTTGTGGTA+AGG | + | chr2.1:28346837-28346856 | MS.gene039181:intron | 35.0% | |
| GGTAAGGATAGTAGATCAAA+TGG | + | chr2.1:28346853-28346872 | MS.gene039181:intron | 35.0% | |
| GTACGCTCAAGTATTTGAAT+GGG | + | chr2.1:28349945-28349964 | MS.gene039181:intron | 35.0% | |
| GTACTTAGTAGGATAATGCT+TGG | + | chr2.1:28347021-28347040 | MS.gene039181:intron | 35.0% | |
| GTACTTGAAGCTAAACTAGA+TGG | - | chr2.1:28347513-28347532 | None:intergenic | 35.0% | |
| GTGGCCATTCAATCAAAATT+AGG | - | chr2.1:28347190-28347209 | None:intergenic | 35.0% | |
| TAATCCCTCTAACAGTACAA+GGG | + | chr2.1:28347597-28347616 | MS.gene039181:intron | 35.0% | |
| TAGAACAGTATGACGTAGTT+TGG | + | chr2.1:28346983-28347002 | MS.gene039181:intron | 35.0% | |
| TCCTTTGGATTGAATCAAAG+GGG | - | chr2.1:28349708-28349727 | None:intergenic | 35.0% | |
| TCTAAACTATTGCTCAAGGT+TGG | - | chr2.1:28350952-28350971 | None:intergenic | 35.0% | |
| TGAACTCATAGATCTTATCC+TGG | - | chr2.1:28351335-28351354 | None:intergenic | 35.0% | |
| TGAGAATCCAAATTCCTGAT+TGG | - | chr2.1:28347068-28347087 | None:intergenic | 35.0% | |
| TGCTTCAAGTAATTGGTATC+AGG | - | chr2.1:28350077-28350096 | None:intergenic | 35.0% | |
| TGGCTGAAATCTATCAGATA+TGG | - | chr2.1:28349012-28349031 | None:intergenic | 35.0% | |
| TGTATATAACCAACCAACAC+AGG | - | chr2.1:28348619-28348638 | None:intergenic | 35.0% | |
| TGTTGGAGACCTTTACATAA+TGG | - | chr2.1:28347948-28347967 | None:intergenic | 35.0% | |
| TTAATCCCTCTAACAGTACA+AGG | + | chr2.1:28347596-28347615 | MS.gene039181:intron | 35.0% | |
| TTCCATTATGAATGAGAACC+GGG | - | chr2.1:28346389-28346408 | None:intergenic | 35.0% | |
| TTCTGAACAGATCATGAAGA+AGG | - | chr2.1:28347414-28347433 | None:intergenic | 35.0% | |
| TTGAGTAACTTGGGTTATGT+TGG | - | chr2.1:28347965-28347984 | None:intergenic | 35.0% | |
| TTGGATCACCAATTACCTAA+AGG | - | chr2.1:28347858-28347877 | None:intergenic | 35.0% | |
| TTTGGATTCTCAATAGTCAG+GGG | + | chr2.1:28347076-28347095 | MS.gene039181:intron | 35.0% | |
| TTTGTTGCTAGAAATGAACC+CGG | + | chr2.1:28346350-28346369 | MS.gene039181:CDS | 35.0% | |
| ! | ACATGTCTCTAGAAAGGTTT+GGG | - | chr2.1:28349143-28349162 | None:intergenic | 35.0% |
| ! | ACTCTTATTCCAAATGGACT+TGG | - | chr2.1:28346255-28346274 | None:intergenic | 35.0% |
| ! | ACTTTTAATCGGCTGTAGAA+TGG | - | chr2.1:28351207-28351226 | None:intergenic | 35.0% |
| ! | AGAAGCTTTTCTCTTGAGTA+AGG | - | chr2.1:28349576-28349595 | None:intergenic | 35.0% |
| ! | AGAATAGCACTTGCTGAAAA+GGG | + | chr2.1:28346276-28346295 | MS.gene039181:CDS | 35.0% |
| ! | ATGGACATGAGAAGGATTTT+AGG | + | chr2.1:28351357-28351376 | MS.gene039181:CDS | 35.0% |
| ! | CCCACCATCTTTTCAATTAT+AGG | - | chr2.1:28346798-28346817 | None:intergenic | 35.0% |
| ! | CTTTTAATCGGCTGTAGAAT+GGG | - | chr2.1:28351206-28351225 | None:intergenic | 35.0% |
| ! | GAAAACTTTAAGGGTCTTCT+TGG | + | chr2.1:28350421-28350440 | MS.gene039181:intron | 35.0% |
| ! | GACACTCATTTTCGAAATTG+AGG | - | chr2.1:28351248-28351267 | None:intergenic | 35.0% |
| ! | GTAATTGGTGATCCAATCAT+GGG | + | chr2.1:28347862-28347881 | MS.gene039181:intron | 35.0% |
| ! | GTAGCTTCTTTTACATTGGT+AGG | + | chr2.1:28346678-28346697 | MS.gene039181:intron | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr2.1:28350601-28350620 | None:intergenic | 35.0% |
| ! | TAATTGGTGATCCAATCATG+GGG | + | chr2.1:28347863-28347882 | MS.gene039181:intron | 35.0% |
| ! | TAGAATAGCACTTGCTGAAA+AGG | + | chr2.1:28346275-28346294 | MS.gene039181:CDS | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr2.1:28350597-28350616 | None:intergenic | 35.0% |
| ! | TTAGAAGGCATGTATGTACT+TGG | - | chr2.1:28349909-28349928 | None:intergenic | 35.0% |
| ! | TTTAGATGTTGATGAGGGTT+TGG | - | chr2.1:28349759-28349778 | None:intergenic | 35.0% |
| !! | AACTTCCTAGCATTTTTGAG+AGG | + | chr2.1:28350213-28350232 | MS.gene039181:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr2.1:28350497-28350516 | None:intergenic | 35.0% |
| !! | TCTTTCTGATTTGGATTGGT+AGG | - | chr2.1:28349192-28349211 | None:intergenic | 35.0% |
| !! | TTTTAGGGAAATGTAGGTAG+AGG | - | chr2.1:28349610-28349629 | None:intergenic | 35.0% |
| !!! | AGGAGACAAATTTGGTTTTG+TGG | + | chr2.1:28351167-28351186 | MS.gene039181:CDS | 35.0% |
| !!! | TCTTTCTTTTGGAGTATCTC+TGG | + | chr2.1:28347332-28347351 | MS.gene039181:intron | 35.0% |
| !!! | TTAGGAGACAGGTCTTATTT+TGG | + | chr2.1:28351144-28351163 | MS.gene039181:CDS | 35.0% |
| AACCCACATTCATGCATTTG+GGG | + | chr2.1:28347099-28347118 | MS.gene039181:intron | 40.0% | |
| ACAAGACACCTTGAGTGATA+TGG | - | chr2.1:28349681-28349700 | None:intergenic | 40.0% | |
| ACTAGCAATACTACTGCAGT+TGG | - | chr2.1:28348752-28348771 | None:intergenic | 40.0% | |
| AGTTCACTATGGACATGAGA+AGG | + | chr2.1:28351349-28351368 | MS.gene039181:CDS | 40.0% | |
| ATCCCGGTTCTCATTCATAA+TGG | + | chr2.1:28346384-28346403 | MS.gene039181:CDS | 40.0% | |
| ATGGAAGGTAAGCATAGTGT+TGG | - | chr2.1:28348302-28348321 | None:intergenic | 40.0% | |
| ATGTTCCGATTGTGTGAATG+CGG | + | chr2.1:28347212-28347231 | MS.gene039181:intron | 40.0% | |
| ATTCAACTTGTGCTCCCAAT+AGG | + | chr2.1:28350241-28350260 | MS.gene039181:intron | 40.0% | |
| ATTGTCCCCAATCAGGAATT+TGG | + | chr2.1:28347058-28347077 | MS.gene039181:intron | 40.0% | |
| ATTTATGGTCATCCGGAGAA+GGG | - | chr2.1:28348162-28348181 | None:intergenic | 40.0% | |
| CAAAACTGCTCAAACCTCTT+TGG | + | chr2.1:28347737-28347756 | MS.gene039181:intron | 40.0% | |
| CAAATACGACCTTACTATGG+TGG | - | chr2.1:28349279-28349298 | None:intergenic | 40.0% | |
| CACTGTTAGAGATAGAGTTG+GGG | + | chr2.1:28346767-28346786 | MS.gene039181:intron | 40.0% | |
| CATATGCTCCAAGAAATGCT+TGG | + | chr2.1:28347814-28347833 | MS.gene039181:intron | 40.0% | |
| CATGGGCATGTTCAAAAATC+AGG | - | chr2.1:28348695-28348714 | None:intergenic | 40.0% | |
| CATTCACACAATCGGAACAT+TGG | - | chr2.1:28347212-28347231 | None:intergenic | 40.0% | |
| CCTTTGGATTGAATCAAAGG+GGG | - | chr2.1:28349707-28349726 | None:intergenic | 40.0% | |
| CTAGTCCTGTCATGAACAAA+GGG | + | chr2.1:28347770-28347789 | MS.gene039181:intron | 40.0% | |
| CTTGTAAGTAAGCCGAATAG+AGG | - | chr2.1:28349650-28349669 | None:intergenic | 40.0% | |
| GAACCCACATTCATGCATTT+GGG | + | chr2.1:28347098-28347117 | MS.gene039181:intron | 40.0% | |
| GACACTGTTAGAGATAGAGT+TGG | + | chr2.1:28346765-28346784 | MS.gene039181:intron | 40.0% | |
| GATCTCTGATAAGGATCAGA+AGG | - | chr2.1:28346483-28346502 | None:intergenic | 40.0% | |
| GGTACGCTCAAGTATTTGAA+TGG | + | chr2.1:28349944-28349963 | MS.gene039181:intron | 40.0% | |
| GTAATTGGTATCAGGCTTGA+AGG | - | chr2.1:28350069-28350088 | None:intergenic | 40.0% | |
| TAAGGATCAGAAGGCAACAA+AGG | - | chr2.1:28346474-28346493 | None:intergenic | 40.0% | |
| TACCCCAAATGCATGAATGT+GGG | - | chr2.1:28347104-28347123 | None:intergenic | 40.0% | |
| TATTTGGGAATCCCCATGAT+TGG | - | chr2.1:28347877-28347896 | None:intergenic | 40.0% | |
| TCATAGATCTTATCCTGGTC+TGG | - | chr2.1:28351330-28351349 | None:intergenic | 40.0% | |
| TCCTTCCTCTCAAAAATGCT+AGG | - | chr2.1:28350221-28350240 | None:intergenic | 40.0% | |
| TCTAGTCCTGTCATGAACAA+AGG | + | chr2.1:28347769-28347788 | MS.gene039181:intron | 40.0% | |
| TGTACATATTGTCCCCAATC+AGG | + | chr2.1:28347051-28347070 | MS.gene039181:intron | 40.0% | |
| TTACCCCAAATGCATGAATG+TGG | - | chr2.1:28347105-28347124 | None:intergenic | 40.0% | |
| TTGAGAGTTACCGGCATTTA+TGG | - | chr2.1:28348177-28348196 | None:intergenic | 40.0% | |
| TTGTTCCAACTTAGCAGCAT+TGG | - | chr2.1:28348378-28348397 | None:intergenic | 40.0% | |
| ! | AACTTTAAGGGTCTTCTTGG+TGG | + | chr2.1:28350424-28350443 | MS.gene039181:intron | 40.0% |
| ! | AGTAAGGTCGTATTTGTTGG+AGG | + | chr2.1:28349283-28349302 | MS.gene039181:intron | 40.0% |
| ! | CAAAGAGGTTTGAGCAGTTT+TGG | - | chr2.1:28347739-28347758 | None:intergenic | 40.0% |
| ! | GACATGTCTCTAGAAAGGTT+TGG | - | chr2.1:28349144-28349163 | None:intergenic | 40.0% |
| ! | GGTAATTGGTGATCCAATCA+TGG | + | chr2.1:28347861-28347880 | MS.gene039181:intron | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr2.1:28350598-28350617 | None:intergenic | 40.0% |
| ! | TCTTCTTTTGCTTCCTGTGT+TGG | + | chr2.1:28348603-28348622 | MS.gene039181:intron | 40.0% |
| ! | TGTAGGTAGAGGCTTTTAAG+TGG | - | chr2.1:28349599-28349618 | None:intergenic | 40.0% |
| ! | TTTTATTGGGGAGACAACAG+TGG | - | chr2.1:28350133-28350152 | None:intergenic | 40.0% |
| !! | AGATGGTGGGAATTAAGCTT+AGG | + | chr2.1:28346808-28346827 | MS.gene039181:intron | 40.0% |
| !! | AGGGTCTTTTAGGGAAATGT+AGG | - | chr2.1:28349616-28349635 | None:intergenic | 40.0% |
| !! | ATTTGGATTGGTAGGACTCT+TGG | - | chr2.1:28349184-28349203 | None:intergenic | 40.0% |
| !! | GGGTTCATTTCTAGCAACAA+AGG | - | chr2.1:28346351-28346370 | None:intergenic | 40.0% |
| !! | TCCTAGCATTTTTGAGAGGA+AGG | + | chr2.1:28350217-28350236 | MS.gene039181:intron | 40.0% |
| !!! | AAGGATTTTAGGCATCGAGT+AGG | + | chr2.1:28351368-28351387 | MS.gene039181:CDS | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr2.1:28350736-28350755 | MS.gene039181:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr2.1:28350755-28350736 | None:intergenic | 40.0% |
| !!! | GATCTGTTTTTACCCTTCTC+CGG | + | chr2.1:28348147-28348166 | MS.gene039181:intron | 40.0% |
| !!! | GATTTTTGGCCAAGTCCATT+TGG | + | chr2.1:28346243-28346262 | MS.gene039181:CDS | 40.0% |
| ACAACAGTGGAGAGAACCTA+TGG | - | chr2.1:28350120-28350139 | None:intergenic | 45.0% | |
| AGAGGGATTAAAGAACGGCT+TGG | - | chr2.1:28347587-28347606 | None:intergenic | 45.0% | |
| AGTGTCCTAAGTTCAGTGCT+TGG | + | chr2.1:28351262-28351281 | MS.gene039181:CDS | 45.0% | |
| ATAGAACTGTCCAAACAGGC+TGG | - | chr2.1:28348511-28348530 | None:intergenic | 45.0% | |
| ATTGCCCGCATTCACACAAT+CGG | - | chr2.1:28347220-28347239 | None:intergenic | 45.0% | |
| CATCAATTCACTCTCTCCCA+AGG | - | chr2.1:28349353-28349372 | None:intergenic | 45.0% | |
| CATTTATGGTCATCCGGAGA+AGG | - | chr2.1:28348163-28348182 | None:intergenic | 45.0% | |
| CCCCCTTTGATTCAATCCAA+AGG | + | chr2.1:28349704-28349723 | MS.gene039181:intron | 45.0% | |
| GCTGCTGTAAGACTGTTTAG+TGG | - | chr2.1:28348339-28348358 | None:intergenic | 45.0% | |
| GGAACCCACATTCATGCATT+TGG | + | chr2.1:28347097-28347116 | MS.gene039181:intron | 45.0% | |
| GTGTCCTAAGTTCAGTGCTT+GGG | + | chr2.1:28351263-28351282 | MS.gene039181:CDS | 45.0% | |
| TACCGGCATTTATGGTCATC+CGG | - | chr2.1:28348169-28348188 | None:intergenic | 45.0% | |
| TCACACAATCGGAACATTGG+TGG | - | chr2.1:28347209-28347228 | None:intergenic | 45.0% | |
| TCGGGTTAACCACCATAGTA+AGG | + | chr2.1:28349267-28349286 | MS.gene039181:intron | 45.0% | |
| TCTCTCCCTTTGTTCATGAC+AGG | - | chr2.1:28347778-28347797 | None:intergenic | 45.0% | |
| TGTAGCTGACCGTACTTAGT+AGG | + | chr2.1:28347010-28347029 | MS.gene039181:intron | 45.0% | |
| TGTTCCGATTGTGTGAATGC+GGG | + | chr2.1:28347213-28347232 | MS.gene039181:intron | 45.0% | |
| TTACAGCAGCTGAACAGTCT+AGG | + | chr2.1:28348349-28348368 | MS.gene039181:intron | 45.0% | |
| ! | ACCGGGATTTTCTTCTGAAC+CGG | - | chr2.1:28346372-28346391 | None:intergenic | 45.0% |
| ! | CTCGAGACATGTCTCTAGAA+AGG | - | chr2.1:28349149-28349168 | None:intergenic | 45.0% |
| ! | GAAGGTAAGCATAGTGTTGG+TGG | - | chr2.1:28348299-28348318 | None:intergenic | 45.0% |
| ! | GTTGATGAGGGTTTGGAGAA+GGG | - | chr2.1:28349752-28349771 | None:intergenic | 45.0% |
| ! | TGTTGATGAGGGTTTGGAGA+AGG | - | chr2.1:28349753-28349772 | None:intergenic | 45.0% |
| !! | CTTTTGCTTCCTGTGTTGGT+TGG | + | chr2.1:28348607-28348626 | MS.gene039181:intron | 45.0% |
| !! | GAGAAACTTGCTGCTGCAAA+TGG | - | chr2.1:28347298-28347317 | None:intergenic | 45.0% |
| !! | TTAGCCCAAGCACTGAACTT+AGG | - | chr2.1:28351270-28351289 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr2.1:28350735-28350754 | MS.gene039181:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr2.1:28350754-28350735 | None:intergenic | 45.0% |
| !!! | GGAGACAGGTCTTATTTTGG+AGG | + | chr2.1:28351147-28351166 | MS.gene039181:CDS | 45.0% |
| !!! | TTTTTAAAAAAAAAAATTAG+TGG | + | chr2.1:28350321-28350340 | MS.gene039181:intron | 5.0% |
| AGTCAAATCGCGAGAAGCAG+AGG | + | chr2.1:28346881-28346900 | MS.gene039181:intron | 50.0% | |
| AGTGGCTGTGAGTTGTGCAA+TGG | - | chr2.1:28348321-28348340 | None:intergenic | 50.0% | |
| ATCAGCATCTACGACTGCGA+AGG | + | chr2.1:28348643-28348662 | MS.gene039181:intron | 50.0% | |
| ATCCTGGTCTGGAAGAGACT+TGG | - | chr2.1:28351319-28351338 | None:intergenic | 50.0% | |
| ATGGTGGTTAACCCGAGTCT+AGG | - | chr2.1:28349263-28349282 | None:intergenic | 50.0% | |
| CCCGGTTCAGAAGAAAATCC+CGG | + | chr2.1:28346368-28346387 | MS.gene039181:CDS | 50.0% | |
| CTCCGGATGACCATAAATGC+CGG | + | chr2.1:28348164-28348183 | MS.gene039181:intron | 50.0% | |
| CTGTCGCAGTGGAACAACAA+AGG | - | chr2.1:28348822-28348841 | None:intergenic | 50.0% | |
| GCTGTGAGTTGTGCAATGGA+AGG | - | chr2.1:28348317-28348336 | None:intergenic | 50.0% | |
| GGTCAACAACGACCAAACAG+TGG | - | chr2.1:28348674-28348693 | None:intergenic | 50.0% | |
| GGTTGCCAATGCTGCTAAGT+TGG | + | chr2.1:28348370-28348389 | MS.gene039181:intron | 50.0% | |
| GTAGGACTCTTGGCTCAAAC+TGG | - | chr2.1:28349174-28349193 | None:intergenic | 50.0% | |
| TGGAGGATCAGTTAGGAGAC+AGG | + | chr2.1:28351133-28351152 | MS.gene039181:CDS | 50.0% | |
| TGGTGGTTAACCCGAGTCTA+GGG | - | chr2.1:28349262-28349281 | None:intergenic | 50.0% | |
| TTCCAAGTCTCTTCCAGACC+AGG | + | chr2.1:28351314-28351333 | MS.gene039181:CDS | 50.0% | |
| TTCGCAGTCGTAGATGCTGA+TGG | - | chr2.1:28348644-28348663 | None:intergenic | 50.0% | |
| ! | CCGGGATTTTCTTCTGAACC+GGG | - | chr2.1:28346371-28346390 | None:intergenic | 50.0% |
| !! | ACGGTTGTCGACTCAGATCT+TGG | - | chr2.1:28349861-28349880 | None:intergenic | 50.0% |
| !! | CTTTGTTGTTCCACTGCGAC+AGG | + | chr2.1:28348820-28348839 | MS.gene039181:intron | 50.0% |
| ACCCTCAACACCCTAGACTC+GGG | + | chr2.1:28349249-28349268 | MS.gene039181:intron | 55.0% | |
| GACCCTCAACACCCTAGACT+CGG | + | chr2.1:28349248-28349267 | MS.gene039181:intron | 55.0% | |
| GCGAAGGACTGTCCACTGTT+TGG | + | chr2.1:28348659-28348678 | MS.gene039181:intron | 55.0% | |
| ! | AATGTTGACTGCAGGGGAGC+TGG | + | chr2.1:28347237-28347256 | MS.gene039181:intron | 55.0% |
| ! | ATGCGGGCAATGTTGACTGC+AGG | + | chr2.1:28347229-28347248 | MS.gene039181:intron | 55.0% |
| ! | TGCGGGCAATGTTGACTGCA+GGG | + | chr2.1:28347230-28347249 | MS.gene039181:intron | 55.0% |
| !! | AACCCGAGTCTAGGGTGTTG+AGG | - | chr2.1:28349254-28349273 | None:intergenic | 55.0% |
| !! | ACCCGAGTCTAGGGTGTTGA+GGG | - | chr2.1:28349253-28349272 | None:intergenic | 55.0% |
| GCTTCTTCGGCCAGCCTGTT+TGG | + | chr2.1:28348498-28348517 | MS.gene039181:intron | 60.0% | |
| GGCAGAAAAGCCTGTCGCAG+TGG | - | chr2.1:28348833-28348852 | None:intergenic | 60.0% | |
| ! | GCGGGCAATGTTGACTGCAG+GGG | + | chr2.1:28347231-28347250 | MS.gene039181:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 28346219 | 28351389 | 28346219 | ID=MS.gene039181 |
| chr2.1 | mRNA | 28346219 | 28351389 | 28346219 | ID=MS.gene039181.t1;Parent=MS.gene039181 |
| chr2.1 | exon | 28346219 | 28346539 | 28346219 | ID=MS.gene039181.t1.exon1;Parent=MS.gene039181.t1 |
| chr2.1 | CDS | 28346219 | 28346539 | 28346219 | ID=cds.MS.gene039181.t1;Parent=MS.gene039181.t1 |
| chr2.1 | exon | 28351045 | 28351389 | 28351045 | ID=MS.gene039181.t1.exon2;Parent=MS.gene039181.t1 |
| chr2.1 | CDS | 28351045 | 28351389 | 28351045 | ID=cds.MS.gene039181.t1;Parent=MS.gene039181.t1 |
| Gene Sequence |
| Protein sequence |
