Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065585.t1 | AIP98335.1 | 95.4 | 219 | 10 | 0 | 1 | 219 | 1 | 219 | 2.90E-118 | 434.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065585.t1 | Q03666 | 69.3 | 218 | 66 | 1 | 3 | 219 | 4 | 221 | 6.0e-88 | 325.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065585.t1 | A0A089GJT0 | 95.4 | 219 | 10 | 0 | 1 | 219 | 1 | 219 | 2.1e-118 | 434.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065585.t1 | MTR_2g070130 | 93.151 | 219 | 15 | 0 | 1 | 219 | 1 | 219 | 9.22e-152 | 420 |
MS.gene065585.t1 | MTR_2g070150 | 86.275 | 204 | 28 | 0 | 1 | 204 | 1 | 204 | 6.38e-133 | 372 |
MS.gene065585.t1 | MTR_2g070180 | 81.776 | 214 | 39 | 0 | 1 | 214 | 1 | 214 | 7.95e-132 | 370 |
MS.gene065585.t1 | MTR_2g070140 | 82.266 | 203 | 36 | 0 | 17 | 219 | 1 | 203 | 2.18e-127 | 358 |
MS.gene065585.t1 | MTR_2g070210 | 70.588 | 221 | 63 | 1 | 1 | 219 | 1 | 221 | 4.74e-117 | 332 |
MS.gene065585.t1 | MTR_2g070200 | 67.873 | 221 | 69 | 2 | 1 | 219 | 1 | 221 | 1.29e-109 | 313 |
MS.gene065585.t1 | MTR_2g070060 | 60.274 | 219 | 87 | 0 | 1 | 219 | 1 | 219 | 1.40e-100 | 291 |
MS.gene065585.t1 | MTR_3g467420 | 61.860 | 215 | 82 | 0 | 5 | 219 | 10 | 224 | 7.35e-100 | 289 |
MS.gene065585.t1 | MTR_2g070070 | 60.731 | 219 | 86 | 0 | 1 | 219 | 1 | 219 | 4.44e-99 | 287 |
MS.gene065585.t1 | MTR_3g467430 | 59.447 | 217 | 88 | 0 | 3 | 219 | 8 | 224 | 3.91e-96 | 280 |
MS.gene065585.t1 | MTR_8g056940 | 60.648 | 216 | 85 | 0 | 1 | 216 | 1 | 216 | 2.14e-95 | 278 |
MS.gene065585.t1 | MTR_2g070110 | 59.817 | 219 | 87 | 1 | 1 | 219 | 1 | 218 | 3.32e-93 | 272 |
MS.gene065585.t1 | MTR_2g070120 | 59.716 | 211 | 85 | 0 | 1 | 211 | 1 | 211 | 7.39e-93 | 271 |
MS.gene065585.t1 | MTR_4g124130 | 57.273 | 220 | 93 | 1 | 1 | 219 | 1 | 220 | 2.11e-90 | 265 |
MS.gene065585.t1 | MTR_5g076900 | 49.315 | 219 | 109 | 2 | 2 | 219 | 4 | 221 | 3.35e-74 | 224 |
MS.gene065585.t1 | MTR_0186s0030 | 68.085 | 141 | 45 | 0 | 1 | 141 | 1 | 141 | 4.83e-65 | 197 |
MS.gene065585.t1 | MTR_1g090060 | 42.718 | 206 | 113 | 3 | 4 | 205 | 3 | 207 | 5.09e-52 | 167 |
MS.gene065585.t1 | MTR_7g065720 | 43.602 | 211 | 105 | 5 | 3 | 205 | 6 | 210 | 2.00e-51 | 166 |
MS.gene065585.t1 | MTR_8g087425 | 43.204 | 206 | 114 | 2 | 2 | 205 | 3 | 207 | 2.31e-51 | 166 |
MS.gene065585.t1 | MTR_4g019780 | 43.415 | 205 | 113 | 2 | 3 | 205 | 7 | 210 | 1.11e-50 | 164 |
MS.gene065585.t1 | MTR_7g065750 | 44.144 | 222 | 107 | 6 | 3 | 216 | 6 | 218 | 1.28e-49 | 161 |
MS.gene065585.t1 | MTR_4g019790 | 44.878 | 205 | 108 | 5 | 4 | 205 | 7 | 209 | 3.33e-49 | 160 |
MS.gene065585.t1 | MTR_4g059730 | 41.627 | 209 | 117 | 3 | 1 | 205 | 1 | 208 | 3.80e-49 | 160 |
MS.gene065585.t1 | MTR_3g099757 | 42.439 | 205 | 115 | 3 | 3 | 205 | 4 | 207 | 1.19e-48 | 159 |
MS.gene065585.t1 | MTR_7g065740 | 43.415 | 205 | 110 | 4 | 3 | 203 | 6 | 208 | 1.31e-48 | 159 |
MS.gene065585.t1 | MTR_7g065630 | 42.927 | 205 | 108 | 5 | 3 | 204 | 24 | 222 | 3.17e-48 | 158 |
MS.gene065585.t1 | MTR_5g037380 | 44.601 | 213 | 109 | 6 | 2 | 205 | 3 | 215 | 4.73e-48 | 157 |
MS.gene065585.t1 | MTR_5g040430 | 37.668 | 223 | 129 | 3 | 2 | 217 | 5 | 224 | 1.12e-47 | 156 |
MS.gene065585.t1 | MTR_8g087410 | 42.157 | 204 | 115 | 2 | 4 | 205 | 6 | 208 | 1.12e-47 | 156 |
MS.gene065585.t1 | MTR_7g065660 | 41.748 | 206 | 115 | 4 | 3 | 205 | 6 | 209 | 3.28e-47 | 155 |
MS.gene065585.t1 | MTR_7g065270 | 43.137 | 204 | 111 | 5 | 3 | 203 | 6 | 207 | 9.82e-47 | 154 |
MS.gene065585.t1 | MTR_7g065710 | 42.512 | 207 | 110 | 6 | 1 | 204 | 1 | 201 | 1.10e-46 | 154 |
MS.gene065585.t1 | MTR_7g065290 | 43.204 | 206 | 112 | 5 | 3 | 205 | 6 | 209 | 8.28e-46 | 152 |
MS.gene065585.t1 | MTR_1g090070 | 41.262 | 206 | 115 | 5 | 4 | 204 | 9 | 213 | 8.65e-46 | 152 |
MS.gene065585.t1 | MTR_6g080440 | 41.885 | 191 | 106 | 4 | 18 | 205 | 17 | 205 | 1.85e-45 | 150 |
MS.gene065585.t1 | MTR_7g065265 | 42.718 | 206 | 113 | 5 | 3 | 205 | 6 | 209 | 3.45e-45 | 150 |
MS.gene065585.t1 | MTR_1g090100 | 41.463 | 205 | 115 | 3 | 5 | 205 | 3 | 206 | 5.32e-45 | 149 |
MS.gene065585.t1 | MTR_1g090090 | 41.395 | 215 | 118 | 5 | 4 | 211 | 3 | 216 | 6.86e-45 | 149 |
MS.gene065585.t1 | MTR_7g065590 | 39.806 | 206 | 119 | 4 | 3 | 205 | 6 | 209 | 1.10e-44 | 149 |
MS.gene065585.t1 | MTR_7g065230 | 43.902 | 205 | 103 | 6 | 3 | 203 | 6 | 202 | 1.48e-44 | 148 |
MS.gene065585.t1 | MTR_1g115195 | 41.706 | 211 | 114 | 6 | 1 | 205 | 1 | 208 | 2.01e-44 | 148 |
MS.gene065585.t1 | MTR_1g090150 | 37.557 | 221 | 120 | 7 | 3 | 215 | 2 | 212 | 1.13e-43 | 146 |
MS.gene065585.t1 | MTR_7g065680 | 50.920 | 163 | 75 | 4 | 3 | 162 | 6 | 166 | 7.83e-43 | 144 |
MS.gene065585.t1 | MTR_7g065700 | 44.498 | 209 | 107 | 6 | 1 | 206 | 4 | 206 | 8.62e-43 | 144 |
MS.gene065585.t1 | MTR_8g061950 | 37.668 | 223 | 130 | 3 | 3 | 216 | 4 | 226 | 1.69e-41 | 141 |
MS.gene065585.t1 | MTR_7g065600 | 37.788 | 217 | 127 | 5 | 3 | 216 | 6 | 217 | 2.05e-41 | 140 |
MS.gene065585.t1 | MTR_7g065640 | 41.379 | 203 | 110 | 5 | 3 | 197 | 6 | 207 | 2.87e-41 | 139 |
MS.gene065585.t1 | MTR_7g065260 | 39.801 | 201 | 116 | 5 | 3 | 200 | 13 | 211 | 1.33e-36 | 128 |
MS.gene065585.t1 | MTR_2g072120 | 67.647 | 68 | 22 | 0 | 47 | 114 | 1 | 68 | 2.49e-29 | 105 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065585.t1 | AT1G17180 | 64.840 | 219 | 77 | 0 | 1 | 219 | 1 | 219 | 1.81e-106 | 306 |
MS.gene065585.t1 | AT1G78380 | 64.352 | 216 | 77 | 0 | 1 | 216 | 1 | 216 | 1.47e-104 | 301 |
MS.gene065585.t1 | AT1G78340 | 62.963 | 216 | 80 | 0 | 1 | 216 | 1 | 216 | 2.86e-101 | 292 |
MS.gene065585.t1 | AT1G78370 | 63.551 | 214 | 78 | 0 | 1 | 214 | 1 | 214 | 3.68e-101 | 292 |
MS.gene065585.t1 | AT1G78360 | 62.273 | 220 | 82 | 1 | 1 | 219 | 1 | 220 | 3.60e-100 | 290 |
MS.gene065585.t1 | AT1G78320 | 65.366 | 205 | 71 | 0 | 1 | 205 | 1 | 205 | 1.96e-99 | 288 |
MS.gene065585.t1 | AT1G17170 | 61.187 | 219 | 84 | 1 | 1 | 219 | 1 | 218 | 7.02e-98 | 284 |
MS.gene065585.t1 | AT1G17190 | 56.744 | 215 | 93 | 0 | 3 | 217 | 4 | 218 | 3.56e-93 | 272 |
MS.gene065585.t1 | AT1G53680 | 53.917 | 217 | 98 | 2 | 5 | 219 | 8 | 224 | 2.50e-85 | 252 |
MS.gene065585.t1 | AT3G43800 | 55.000 | 220 | 95 | 3 | 3 | 218 | 4 | 223 | 4.67e-81 | 241 |
MS.gene065585.t1 | AT1G78320 | 56.098 | 205 | 63 | 1 | 1 | 205 | 1 | 178 | 1.66e-77 | 231 |
MS.gene065585.t1 | AT2G29420 | 42.927 | 205 | 114 | 3 | 2 | 204 | 7 | 210 | 7.98e-56 | 177 |
MS.gene065585.t1 | AT3G09270 | 44.037 | 218 | 116 | 4 | 3 | 217 | 5 | 219 | 7.86e-55 | 175 |
MS.gene065585.t1 | AT2G29490 | 42.233 | 206 | 113 | 4 | 3 | 204 | 6 | 209 | 1.85e-52 | 169 |
MS.gene065585.t1 | AT2G29440 | 41.262 | 206 | 115 | 4 | 3 | 204 | 5 | 208 | 1.13e-50 | 164 |
MS.gene065585.t1 | AT2G29480 | 41.262 | 206 | 115 | 4 | 3 | 204 | 6 | 209 | 1.25e-50 | 164 |
MS.gene065585.t1 | AT2G29460 | 41.262 | 206 | 115 | 4 | 3 | 204 | 6 | 209 | 2.77e-50 | 163 |
MS.gene065585.t1 | AT2G29450 | 41.063 | 207 | 115 | 5 | 3 | 204 | 5 | 209 | 8.74e-50 | 162 |
MS.gene065585.t1 | AT1G59700 | 41.364 | 220 | 120 | 5 | 3 | 213 | 5 | 224 | 9.46e-48 | 157 |
MS.gene065585.t1 | AT2G29470 | 40.000 | 205 | 116 | 5 | 5 | 204 | 8 | 210 | 9.69e-48 | 157 |
MS.gene065585.t1 | AT1G74590 | 39.091 | 220 | 124 | 5 | 3 | 216 | 6 | 221 | 6.98e-46 | 152 |
MS.gene065585.t1 | AT1G10360 | 40.639 | 219 | 122 | 4 | 2 | 212 | 3 | 221 | 1.52e-45 | 151 |
MS.gene065585.t1 | AT1G69930 | 39.423 | 208 | 119 | 3 | 5 | 205 | 13 | 220 | 2.12e-44 | 148 |
MS.gene065585.t1 | AT1G10370 | 40.741 | 216 | 118 | 5 | 2 | 208 | 3 | 217 | 3.49e-44 | 147 |
MS.gene065585.t1 | AT1G59670 | 40.359 | 223 | 122 | 5 | 3 | 215 | 5 | 226 | 7.38e-44 | 147 |
MS.gene065585.t1 | AT1G27140 | 39.631 | 217 | 121 | 4 | 3 | 209 | 5 | 221 | 9.61e-44 | 147 |
MS.gene065585.t1 | AT1G27130 | 36.726 | 226 | 131 | 5 | 3 | 219 | 5 | 227 | 6.90e-42 | 142 |
MS.gene065585.t1 | AT5G62480 | 35.909 | 220 | 129 | 4 | 1 | 209 | 5 | 223 | 1.76e-41 | 141 |
MS.gene065585.t1 | AT1G69920 | 36.607 | 224 | 124 | 6 | 5 | 216 | 35 | 252 | 1.92e-38 | 134 |
MS.gene065585.t1 | AT5G62480 | 29.817 | 218 | 114 | 5 | 3 | 209 | 7 | 196 | 7.07e-25 | 97.4 |
MS.gene065585.t1 | AT5G62480 | 29.817 | 218 | 115 | 5 | 3 | 209 | 7 | 197 | 7.08e-25 | 97.8 |
Find 49 sgRNAs with CRISPR-Local
Find 62 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATTATACAATTGGTTTAG+AGG | 0.271694 | 2.2:+21884711 | MS.gene065585:CDS |
TTCAGTATATTGATGAAGTT+TGG | 0.281776 | 2.2:+21884172 | MS.gene065585:CDS |
AAGTGATTCTGCTTAATTAC+TGG | 0.295778 | 2.2:+21883971 | MS.gene065585:CDS |
TTCAATCTGCATGCATCTAT+TGG | 0.310100 | 2.2:-21884793 | None:intergenic |
AATTACTGGCCAAGTCCTTT+TGG | 0.329731 | 2.2:+21883985 | MS.gene065585:CDS |
CTAGCTTGTGCTTTCTGATA+AGG | 0.347248 | 2.2:-21884225 | None:intergenic |
CCTCTAAACCAATTGTATAA+TGG | 0.353655 | 2.2:-21884711 | None:intergenic |
CATTTATTCCATTATACAAT+TGG | 0.359711 | 2.2:+21884703 | MS.gene065585:CDS |
CAAAATAGCCCTAGCTGAAA+AGG | 0.359899 | 2.2:+21884017 | MS.gene065585:CDS |
TTTCCATTATGAATCAGAAC+AGG | 0.384624 | 2.2:-21884123 | None:intergenic |
ATCCCTGTTCTGATTCATAA+TGG | 0.385871 | 2.2:+21884120 | MS.gene065585:CDS |
TCATGGATCTTATCCTGATC+AGG | 0.386076 | 2.2:-21884834 | None:intergenic |
AAATAGATCTATGAAGTTGC+AGG | 0.398837 | 2.2:+21884546 | MS.gene065585:intron |
AGAAAGCACAAGCTAGATTC+TGG | 0.400529 | 2.2:+21884232 | MS.gene065585:CDS |
ATGAAGTTGCAGGGAACAAT+TGG | 0.408328 | 2.2:+21884556 | MS.gene065585:CDS |
AGCAATTAAAGATTCACAAA+TGG | 0.421376 | 2.2:-21884148 | None:intergenic |
GTGGAGCTCAAGAAGAAGTA+TGG | 0.423879 | 2.2:+21884864 | MS.gene065585:CDS |
TTGGCCCAAGCACTGAACTT+AGG | 0.425895 | 2.2:-21884774 | None:intergenic |
GCAATTAAAGATTCACAAAT+GGG | 0.429408 | 2.2:-21884147 | None:intergenic |
TTTAGAGGCTATGAGGCCTT+TGG | 0.433110 | 2.2:+21884726 | MS.gene065585:CDS |
ACTCTTGCTCCAAGAGTTTG+AGG | 0.435255 | 2.2:-21884629 | None:intergenic |
AGTCTCATGCCAAAAGGACT+TGG | 0.442560 | 2.2:-21883994 | None:intergenic |
CATAGAAGCCCTCAAACTCT+TGG | 0.450864 | 2.2:+21884620 | MS.gene065585:CDS |
TTCCAAGTCACTCCCTGATC+AGG | 0.451766 | 2.2:+21884821 | MS.gene065585:CDS |
TGGCCCAAGCACTGAACTTA+GGG | 0.452366 | 2.2:-21884773 | None:intergenic |
GGTTCATTTGTAACAACAAA+GGG | 0.474781 | 2.2:-21884083 | None:intergenic |
GTGCCCTAAGTTCAGTGCTT+GGG | 0.482104 | 2.2:+21884770 | MS.gene065585:CDS |
CTCTTGCTCCAAGAGTTTGA+GGG | 0.482617 | 2.2:-21884628 | None:intergenic |
GAAAGCACAAGCTAGATTCT+GGG | 0.487661 | 2.2:+21884233 | MS.gene065585:CDS |
CAAACTCTTGGAGCAAGAGT+TGG | 0.489749 | 2.2:+21884632 | MS.gene065585:CDS |
AAACTCTTGGAGCAAGAGTT+GGG | 0.491382 | 2.2:+21884633 | MS.gene065585:CDS |
AGAGCAAGAAGCTGCAAAGA+AGG | 0.498696 | 2.2:+21884593 | MS.gene065585:CDS |
GGCTGATTATATTGATAAGA+AGG | 0.507102 | 2.2:+21884254 | MS.gene065585:CDS |
CAATTGGTTTAGAGGCTATG+AGG | 0.508218 | 2.2:+21884719 | MS.gene065585:CDS |
AAAATAGCCCTAGCTGAAAA+GGG | 0.509162 | 2.2:+21884018 | MS.gene065585:CDS |
AGTGCCCTAAGTTCAGTGCT+TGG | 0.527093 | 2.2:+21884769 | MS.gene065585:CDS |
TGAGCTCCACAATCAAATCA+TGG | 0.537535 | 2.2:-21884851 | None:intergenic |
TAAGATCCATGATTTGATTG+TGG | 0.557919 | 2.2:+21884845 | MS.gene065585:CDS |
CATGGATCTTATCCTGATCA+GGG | 0.576720 | 2.2:-21884833 | None:intergenic |
GAAGAAGTATGGCTTTGAGT+AGG | 0.577171 | 2.2:+21884875 | MS.gene065585:CDS |
CAGAATCACTTCATCAGCCA+TGG | 0.586532 | 2.2:-21883959 | None:intergenic |
GCTTTCTGATAAGGATCAGA+AGG | 0.590422 | 2.2:-21884216 | None:intergenic |
AATAGATCTATGAAGTTGCA+GGG | 0.596469 | 2.2:+21884547 | MS.gene065585:intron |
GGGTTCATTTGTAACAACAA+AGG | 0.598423 | 2.2:-21884084 | None:intergenic |
GTCTACACTGATCTTGCCAA+AGG | 0.602126 | 2.2:-21884742 | None:intergenic |
TAAGGATCAGAAGGCAACAA+AGG | 0.613337 | 2.2:-21884207 | None:intergenic |
TTCCATTATGAATCAGAACA+GGG | 0.622934 | 2.2:-21884122 | None:intergenic |
TGGCAAGATCAGTGTAGACA+AGG | 0.634237 | 2.2:+21884746 | MS.gene065585:CDS |
ATCCTGATCAGGGAGTGACT+TGG | 0.640797 | 2.2:-21884823 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATTTATTCCATTATACAAT+TGG | + | chr2.2:21884703-21884722 | MS.gene065585:CDS | 20.0% |
!!! | ATTTTGGAGATAATTCATAT+TGG | + | chr2.2:21884403-21884422 | MS.gene065585:intron | 20.0% |
!!! | TGTATCTAAGTTAAGAATTT+TGG | + | chr2.2:21884387-21884406 | MS.gene065585:intron | 20.0% |
!!! | TTTTGGAGATAATTCATATT+GGG | + | chr2.2:21884404-21884423 | MS.gene065585:intron | 20.0% |
! | AGCAATTAAAGATTCACAAA+TGG | - | chr2.2:21884151-21884170 | None:intergenic | 25.0% |
! | GCAATTAAAGATTCACAAAT+GGG | - | chr2.2:21884150-21884169 | None:intergenic | 25.0% |
! | GCATGCTAAAAATATCAAAT+GGG | - | chr2.2:21884434-21884453 | None:intergenic | 25.0% |
! | TGCATGCTAAAAATATCAAA+TGG | - | chr2.2:21884435-21884454 | None:intergenic | 25.0% |
! | TTCAGTATATTGATGAAGTT+TGG | + | chr2.2:21884172-21884191 | MS.gene065585:CDS | 25.0% |
!! | TTTCTGAAAAGTTTAGACAT+TGG | + | chr2.2:21884332-21884351 | MS.gene065585:intron | 25.0% |
AAATAGATCTATGAAGTTGC+AGG | + | chr2.2:21884546-21884565 | MS.gene065585:intron | 30.0% | |
AAGTGATTCTGCTTAATTAC+TGG | + | chr2.2:21883971-21883990 | MS.gene065585:CDS | 30.0% | |
AATAGATCTATGAAGTTGCA+GGG | + | chr2.2:21884547-21884566 | MS.gene065585:intron | 30.0% | |
CCTCTAAACCAATTGTATAA+TGG | - | chr2.2:21884714-21884733 | None:intergenic | 30.0% | |
GGCTGATTATATTGATAAGA+AGG | + | chr2.2:21884254-21884273 | MS.gene065585:CDS | 30.0% | |
GGTTCATTTGTAACAACAAA+GGG | - | chr2.2:21884086-21884105 | None:intergenic | 30.0% | |
TAAGATCCATGATTTGATTG+TGG | + | chr2.2:21884845-21884864 | MS.gene065585:CDS | 30.0% | |
TTCCATTATGAATCAGAACA+GGG | - | chr2.2:21884125-21884144 | None:intergenic | 30.0% | |
TTTCCATTATGAATCAGAAC+AGG | - | chr2.2:21884126-21884145 | None:intergenic | 30.0% | |
! | CCATTATACAATTGGTTTAG+AGG | + | chr2.2:21884711-21884730 | MS.gene065585:CDS | 30.0% |
!!! | TTCTTGCTCTTCTTCTTTTT+TGG | - | chr2.2:21884583-21884602 | None:intergenic | 30.0% |
!!! | TTGGGAGACAAGAATTTTTT+TGG | + | chr2.2:21884651-21884670 | MS.gene065585:CDS | 30.0% |
AAAATAGCCCTAGCTGAAAA+GGG | + | chr2.2:21884018-21884037 | MS.gene065585:CDS | 35.0% | |
ATCCCTGTTCTGATTCATAA+TGG | + | chr2.2:21884120-21884139 | MS.gene065585:CDS | 35.0% | |
GGGTTCATTTGTAACAACAA+AGG | - | chr2.2:21884087-21884106 | None:intergenic | 35.0% | |
TTCAATCTGCATGCATCTAT+TGG | - | chr2.2:21884796-21884815 | None:intergenic | 35.0% | |
! | ACAGGGATTTTCTTATGAAC+AGG | - | chr2.2:21884108-21884127 | None:intergenic | 35.0% |
! | CAGGGATTTTCTTATGAACA+GGG | - | chr2.2:21884107-21884126 | None:intergenic | 35.0% |
!! | ATTTTGAGTCTCATGCCAAA+AGG | - | chr2.2:21884003-21884022 | None:intergenic | 35.0% |
!!! | GGAGACAAGAATTTTTTTGG+AGG | + | chr2.2:21884654-21884673 | MS.gene065585:CDS | 35.0% |
AAACTCTTGGAGCAAGAGTT+GGG | + | chr2.2:21884633-21884652 | MS.gene065585:CDS | 40.0% | |
ATGAAGTTGCAGGGAACAAT+TGG | + | chr2.2:21884556-21884575 | MS.gene065585:CDS | 40.0% | |
CAAAATAGCCCTAGCTGAAA+AGG | + | chr2.2:21884017-21884036 | MS.gene065585:CDS | 40.0% | |
CATGGATCTTATCCTGATCA+GGG | - | chr2.2:21884836-21884855 | None:intergenic | 40.0% | |
GCTTTCTGATAAGGATCAGA+AGG | - | chr2.2:21884219-21884238 | None:intergenic | 40.0% | |
TAAGGATCAGAAGGCAACAA+AGG | - | chr2.2:21884210-21884229 | None:intergenic | 40.0% | |
TCATGGATCTTATCCTGATC+AGG | - | chr2.2:21884837-21884856 | None:intergenic | 40.0% | |
TGAGCTCCACAATCAAATCA+TGG | - | chr2.2:21884854-21884873 | None:intergenic | 40.0% | |
! | AATTACTGGCCAAGTCCTTT+TGG | + | chr2.2:21883985-21884004 | MS.gene065585:CDS | 40.0% |
! | AGAAAGCACAAGCTAGATTC+TGG | + | chr2.2:21884232-21884251 | MS.gene065585:CDS | 40.0% |
! | CAATTGGTTTAGAGGCTATG+AGG | + | chr2.2:21884719-21884738 | MS.gene065585:CDS | 40.0% |
! | CTAGCTTGTGCTTTCTGATA+AGG | - | chr2.2:21884228-21884247 | None:intergenic | 40.0% |
! | CTTGATACCCTTTTCAGCTA+GGG | - | chr2.2:21884028-21884047 | None:intergenic | 40.0% |
! | GAAAGCACAAGCTAGATTCT+GGG | + | chr2.2:21884233-21884252 | MS.gene065585:CDS | 40.0% |
!!! | TTTTTTGGAGGAGACAAGCT+TGG | + | chr2.2:21884666-21884685 | MS.gene065585:CDS | 40.0% |
ACTCTTGCTCCAAGAGTTTG+AGG | - | chr2.2:21884632-21884651 | None:intergenic | 45.0% | |
AGAGCAAGAAGCTGCAAAGA+AGG | + | chr2.2:21884593-21884612 | MS.gene065585:CDS | 45.0% | |
AGTCTCATGCCAAAAGGACT+TGG | - | chr2.2:21883997-21884016 | None:intergenic | 45.0% | |
CAAACTCTTGGAGCAAGAGT+TGG | + | chr2.2:21884632-21884651 | MS.gene065585:CDS | 45.0% | |
CATAGAAGCCCTCAAACTCT+TGG | + | chr2.2:21884620-21884639 | MS.gene065585:CDS | 45.0% | |
CTCTTGCTCCAAGAGTTTGA+GGG | - | chr2.2:21884631-21884650 | None:intergenic | 45.0% | |
GTCTACACTGATCTTGCCAA+AGG | - | chr2.2:21884745-21884764 | None:intergenic | 45.0% | |
GTGGAGCTCAAGAAGAAGTA+TGG | + | chr2.2:21884864-21884883 | MS.gene065585:CDS | 45.0% | |
TGGCAAGATCAGTGTAGACA+AGG | + | chr2.2:21884746-21884765 | MS.gene065585:CDS | 45.0% | |
TTTAGAGGCTATGAGGCCTT+TGG | + | chr2.2:21884726-21884745 | MS.gene065585:CDS | 45.0% | |
! | GCTTGATACCCTTTTCAGCT+AGG | - | chr2.2:21884029-21884048 | None:intergenic | 45.0% |
AGTGCCCTAAGTTCAGTGCT+TGG | + | chr2.2:21884769-21884788 | MS.gene065585:CDS | 50.0% | |
ATCCTGATCAGGGAGTGACT+TGG | - | chr2.2:21884826-21884845 | None:intergenic | 50.0% | |
GTGCCCTAAGTTCAGTGCTT+GGG | + | chr2.2:21884770-21884789 | MS.gene065585:CDS | 50.0% | |
TTCCAAGTCACTCCCTGATC+AGG | + | chr2.2:21884821-21884840 | MS.gene065585:CDS | 50.0% | |
!! | TGGCCCAAGCACTGAACTTA+GGG | - | chr2.2:21884776-21884795 | None:intergenic | 50.0% |
!! | TTGGCCCAAGCACTGAACTT+AGG | - | chr2.2:21884777-21884796 | None:intergenic | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 21883961 | 21884896 | 21883961 | ID=MS.gene065585 |
chr2.2 | mRNA | 21883961 | 21884896 | 21883961 | ID=MS.gene065585.t1;Parent=MS.gene065585 |
chr2.2 | exon | 21883961 | 21884275 | 21883961 | ID=MS.gene065585.t1.exon1;Parent=MS.gene065585.t1 |
chr2.2 | CDS | 21883961 | 21884275 | 21883961 | ID=cds.MS.gene065585.t1;Parent=MS.gene065585.t1 |
chr2.2 | exon | 21884552 | 21884896 | 21884552 | ID=MS.gene065585.t1.exon2;Parent=MS.gene065585.t1 |
chr2.2 | CDS | 21884552 | 21884896 | 21884552 | ID=cds.MS.gene065585.t1;Parent=MS.gene065585.t1 |
Gene Sequence |
Protein sequence |