Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042064.t1 | XP_013458692.1 | 96.5 | 230 | 7 | 1 | 4 | 233 | 2 | 230 | 1.00E-121 | 446 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042064.t1 | P57108 | 65.3 | 222 | 73 | 2 | 6 | 227 | 2 | 219 | 4.9e-80 | 298.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042064.t1 | A0A072USC9 | 96.5 | 230 | 7 | 1 | 4 | 233 | 2 | 230 | 7.5e-122 | 446.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042064.t1 | MTR_4g134370 | 96.522 | 230 | 7 | 1 | 4 | 233 | 2 | 230 | 1.55e-166 | 458 |
| MS.gene042064.t1 | MTR_4g134380 | 84.279 | 229 | 31 | 1 | 1 | 229 | 3 | 226 | 4.47e-144 | 402 |
| MS.gene042064.t1 | MTR_4g134380 | 83.146 | 178 | 25 | 1 | 1 | 178 | 3 | 175 | 1.99e-108 | 310 |
| MS.gene042064.t1 | MTR_4g134360 | 86.508 | 126 | 14 | 1 | 21 | 146 | 16 | 138 | 2.86e-75 | 224 |
| MS.gene042064.t1 | MTR_2g070150 | 31.034 | 174 | 101 | 5 | 15 | 184 | 1 | 159 | 2.41e-15 | 72.4 |
| MS.gene042064.t1 | MTR_2g070180 | 29.775 | 178 | 98 | 5 | 15 | 184 | 1 | 159 | 2.16e-14 | 70.1 |
| MS.gene042064.t1 | MTR_2g070210 | 28.636 | 220 | 128 | 7 | 15 | 222 | 1 | 203 | 3.40e-14 | 69.7 |
| MS.gene042064.t1 | MTR_8g061950 | 27.928 | 222 | 134 | 8 | 17 | 224 | 4 | 213 | 1.57e-13 | 67.8 |
| MS.gene042064.t1 | MTR_3g450790 | 32.258 | 155 | 96 | 4 | 32 | 180 | 15 | 166 | 2.01e-13 | 67.4 |
| MS.gene042064.t1 | MTR_3g450930 | 31.928 | 166 | 98 | 5 | 28 | 184 | 11 | 170 | 6.51e-13 | 65.9 |
| MS.gene042064.t1 | MTR_7g065720 | 27.184 | 206 | 121 | 7 | 32 | 225 | 21 | 209 | 8.11e-13 | 65.9 |
| MS.gene042064.t1 | MTR_2g070200 | 29.310 | 174 | 105 | 6 | 15 | 184 | 1 | 160 | 3.61e-12 | 63.9 |
| MS.gene042064.t1 | MTR_3g064700 | 29.651 | 172 | 112 | 3 | 21 | 186 | 5 | 173 | 3.73e-12 | 63.9 |
| MS.gene042064.t1 | MTR_2g070140 | 31.646 | 158 | 89 | 5 | 31 | 184 | 1 | 143 | 5.88e-12 | 63.2 |
| MS.gene042064.t1 | MTR_1g115195 | 28.910 | 211 | 129 | 8 | 21 | 222 | 6 | 204 | 7.93e-12 | 63.2 |
| MS.gene042064.t1 | MTR_7g065230 | 28.037 | 214 | 135 | 7 | 21 | 230 | 10 | 208 | 1.30e-11 | 62.4 |
| MS.gene042064.t1 | MTR_0186s0030 | 36.458 | 96 | 57 | 2 | 15 | 109 | 1 | 93 | 1.41e-11 | 60.8 |
| MS.gene042064.t1 | MTR_2g070130 | 26.966 | 178 | 103 | 5 | 15 | 184 | 1 | 159 | 3.93e-11 | 61.2 |
| MS.gene042064.t1 | MTR_4g124130 | 30.409 | 171 | 107 | 5 | 15 | 184 | 1 | 160 | 8.26e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042064.t1 | AT2G02390 | 61.860 | 215 | 81 | 1 | 13 | 227 | 3 | 216 | 7.01e-95 | 277 |
| MS.gene042064.t1 | AT2G02380 | 62.559 | 211 | 78 | 1 | 17 | 227 | 10 | 219 | 2.98e-94 | 275 |
| MS.gene042064.t1 | AT2G02390 | 59.910 | 222 | 81 | 2 | 13 | 227 | 3 | 223 | 6.14e-92 | 270 |
| MS.gene042064.t1 | AT2G02390 | 63.298 | 188 | 68 | 1 | 13 | 200 | 3 | 189 | 7.82e-82 | 243 |
| MS.gene042064.t1 | AT2G02390 | 60.119 | 168 | 66 | 1 | 60 | 227 | 21 | 187 | 3.89e-70 | 213 |
| MS.gene042064.t1 | AT2G30870 | 33.548 | 155 | 94 | 3 | 32 | 180 | 15 | 166 | 1.34e-15 | 73.2 |
| MS.gene042064.t1 | AT3G09270 | 28.241 | 216 | 121 | 9 | 21 | 221 | 9 | 205 | 2.59e-12 | 64.3 |
| MS.gene042064.t1 | AT2G30860 | 33.775 | 151 | 83 | 5 | 32 | 180 | 15 | 150 | 3.36e-12 | 63.2 |
| MS.gene042064.t1 | AT2G30860 | 33.333 | 174 | 83 | 7 | 32 | 187 | 15 | 173 | 5.36e-12 | 63.5 |
| MS.gene042064.t1 | AT1G78380 | 26.705 | 176 | 102 | 5 | 15 | 182 | 1 | 157 | 2.77e-11 | 61.6 |
| MS.gene042064.t1 | AT1G78320 | 32.759 | 116 | 73 | 3 | 15 | 128 | 1 | 113 | 3.39e-11 | 61.2 |
| MS.gene042064.t1 | AT1G17170 | 33.333 | 96 | 60 | 2 | 15 | 109 | 1 | 93 | 9.61e-11 | 60.1 |
Find 40 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATACATACCAGGGTATTA+AGG | 0.307259 | 8.3:-379092 | None:intergenic |
| AGCTGATTCTGTATTCATAT+TGG | 0.330337 | 8.3:+378453 | MS.gene042064:CDS |
| CAACTGCTTTGTACTCATAT+TGG | 0.338820 | 8.3:-378526 | None:intergenic |
| GGCAACGTCTCCCGGAATGC+TGG | 0.346061 | 8.3:-382590 | None:intergenic |
| ATTATGCGATCCCAGCATTC+CGG | 0.359242 | 8.3:+382579 | MS.gene042064:CDS |
| CAAAAGAGCTATCAATTTCC+AGG | 0.361331 | 8.3:+378893 | MS.gene042064:CDS |
| GCTGCATCTGGTTGATTCTC+TGG | 0.375629 | 8.3:-382611 | None:intergenic |
| CTCAGGTAGCCTGCTGCATC+TGG | 0.379979 | 8.3:-382623 | None:intergenic |
| GAATGCTGGGATCGCATAAT+AGG | 0.380699 | 8.3:-382576 | None:intergenic |
| GCAGGGCCATCGACGAGAAC+AGG | 0.414471 | 8.3:-378710 | None:intergenic |
| GATTCTCTGGCAACGTCTCC+CGG | 0.429343 | 8.3:-382598 | None:intergenic |
| TTTGTTCCTGTTCTCGTCGA+TGG | 0.450370 | 8.3:+378704 | MS.gene042064:CDS |
| AGAACAGGAACAAAACCAAC+AGG | 0.454426 | 8.3:-378695 | None:intergenic |
| TTATGCGATCCCAGCATTCC+GGG | 0.466888 | 8.3:+382580 | MS.gene042064:CDS |
| ACTCATATTGGAGACCTTTG+AGG | 0.469153 | 8.3:-378514 | None:intergenic |
| GTCCAGAGTGTAATTAGAAA+AGG | 0.497149 | 8.3:+379278 | MS.gene042064:CDS |
| GTAATTAGAAAAGGCTTCAC+AGG | 0.504567 | 8.3:+379287 | MS.gene042064:CDS |
| GCAACGTCTCCCGGAATGCT+GGG | 0.507165 | 8.3:-382589 | None:intergenic |
| CGTGTAATCTTGATAGAGTA+GGG | 0.516880 | 8.3:-382550 | None:intergenic |
| GGGAGCAAAGGATGTTGTTG+AGG | 0.523337 | 8.3:-378858 | None:intergenic |
| TCGTGTAATCTTGATAGAGT+AGG | 0.527947 | 8.3:-382551 | None:intergenic |
| CTAATTACACTCTGGACCCA+TGG | 0.531500 | 8.3:-379272 | None:intergenic |
| GCATTGCTCGCAGTATTTGG+AGG | 0.532414 | 8.3:+378827 | MS.gene042064:intron |
| AGCTATTAAAAGAACACGCT+GGG | 0.535135 | 8.3:+381530 | MS.gene042064:CDS |
| AAGGGAGAACAATATCATCC+TGG | 0.546207 | 8.3:+378557 | MS.gene042064:CDS |
| TTTCTCAAGCTCAACCCTGT+TGG | 0.559898 | 8.3:+378680 | MS.gene042064:CDS |
| CACGCTGGGAGATATGCTAC+TGG | 0.561914 | 8.3:+381544 | MS.gene042064:CDS |
| GGTTGAGAGCAATTCGAACT+CGG | 0.563925 | 8.3:-378493 | None:intergenic |
| GAGAATCAACCAGATGCAGC+AGG | 0.565566 | 8.3:+382614 | MS.gene042064:CDS |
| CAGTCCCAAATTACTGACTC+AGG | 0.569373 | 8.3:-382640 | None:intergenic |
| CGAATTGCTCTCAACCTCAA+AGG | 0.578475 | 8.3:+378500 | MS.gene042064:CDS |
| TAGAAGCAGCATCTAACTGA+GGG | 0.581371 | 8.3:-381920 | None:intergenic |
| TGAATATCAGTAGGGAGCAA+AGG | 0.581413 | 8.3:-378870 | None:intergenic |
| AAGCTATTAAAAGAACACGC+TGG | 0.608867 | 8.3:+381529 | MS.gene042064:CDS |
| GAGAGCAATTCGAACTCGGA+AGG | 0.617162 | 8.3:-378489 | None:intergenic |
| TCTTCAAAACCTTAATACCC+TGG | 0.637265 | 8.3:+379083 | MS.gene042064:CDS |
| TTAGAAGCAGCATCTAACTG+AGG | 0.652562 | 8.3:-381921 | None:intergenic |
| TAAGAGATTCAACATTGACA+TGG | 0.678314 | 8.3:+381941 | MS.gene042064:CDS |
| GAACAGGAACAAAACCAACA+GGG | 0.722903 | 8.3:-378694 | None:intergenic |
| AGAAGCAGCATCTAACTGAG+GGG | 0.751646 | 8.3:-381919 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTATTACTTTATACAT+CGG | - | chr8.3:381713-381732 | None:intergenic | 10.0% |
| !! | AAATATGCTTTATAGATTAT+TGG | - | chr8.3:379646-379665 | None:intergenic | 15.0% |
| !! | TCTGTTTGATTAAAAAAATT+CGG | + | chr8.3:382304-382323 | MS.gene042064:intron | 15.0% |
| !! | TTCATTATAATTTCAAATCT+AGG | + | chr8.3:380028-380047 | MS.gene042064:intron | 15.0% |
| !!! | AAAATATTTTTAACCAGTAA+AGG | - | chr8.3:381413-381432 | None:intergenic | 15.0% |
| !!! | AATATAAATTTCATTTTCTC+TGG | - | chr8.3:380657-380676 | None:intergenic | 15.0% |
| !!! | GTTTTTTTATTTCTCTTATT+AGG | - | chr8.3:380800-380819 | None:intergenic | 15.0% |
| !!! | TGCATTATATTCTAAAATAT+CGG | - | chr8.3:381745-381764 | None:intergenic | 15.0% |
| !!! | TGTTTTTAGGAATATATTTT+CGG | + | chr8.3:381839-381858 | MS.gene042064:intron | 15.0% |
| !!! | TTGTTTTGTTCTTTTTTTAA+AGG | + | chr8.3:379142-379161 | MS.gene042064:intron | 15.0% |
| !! | AAAGATTAATTAAGCATACA+AGG | - | chr8.3:378623-378642 | None:intergenic | 20.0% |
| !! | AATAAAGTGGATCATAAAAT+TGG | + | chr8.3:381123-381142 | MS.gene042064:intron | 20.0% |
| !! | AGAATAAACAATGAACTTTA+AGG | + | chr8.3:380267-380286 | MS.gene042064:intron | 20.0% |
| !! | AGTAAATAAATCCTTTCAAA+AGG | + | chr8.3:381632-381651 | MS.gene042064:intron | 20.0% |
| !! | CAAAAGTAAACAGATAAATA+CGG | + | chr8.3:380537-380556 | MS.gene042064:intron | 20.0% |
| !! | CTGTTTGATTAAAAAAATTC+GGG | + | chr8.3:382305-382324 | MS.gene042064:intron | 20.0% |
| !! | GTAAATAAATCCTTTCAAAA+GGG | + | chr8.3:381633-381652 | MS.gene042064:intron | 20.0% |
| !! | TAAAGTTCATTGTTTATTCT+TGG | - | chr8.3:380267-380286 | None:intergenic | 20.0% |
| !!! | ACATTGTAGATTTTTAGAAA+AGG | - | chr8.3:378779-378798 | None:intergenic | 20.0% |
| !!! | AGCATTTGTTATTAAAAAAG+AGG | - | chr8.3:381285-381304 | None:intergenic | 20.0% |
| !!! | ATTATATTCTAAAATATCGG+AGG | - | chr8.3:381742-381761 | None:intergenic | 20.0% |
| !!! | CAAGTTTTTGAAACTTAATA+TGG | + | chr8.3:381789-381808 | MS.gene042064:intron | 20.0% |
| !!! | TACATTTTTTTAACTGTTAG+AGG | - | chr8.3:379699-379718 | None:intergenic | 20.0% |
| !!! | TCTTACTTCTTCAAAATTTT+AGG | + | chr8.3:379119-379138 | MS.gene042064:intron | 20.0% |
| !!! | TCTTTTGCTACTATTTTTAT+TGG | - | chr8.3:379335-379354 | None:intergenic | 20.0% |
| !!! | TGAATCTGATTTAAGATTTT+TGG | - | chr8.3:379808-379827 | None:intergenic | 20.0% |
| !!! | TTTAACTTTATAGATCCTTT+TGG | + | chr8.3:379483-379502 | MS.gene042064:intron | 20.0% |
| ! | AAAACCAAATAGGTAAAACA+TGG | + | chr8.3:380928-380947 | MS.gene042064:intron | 25.0% |
| ! | AAACCAAATAGGTAAAACAT+GGG | + | chr8.3:380929-380948 | MS.gene042064:intron | 25.0% |
| ! | AAACTTATAACAATTGATCC+AGG | + | chr8.3:379904-379923 | MS.gene042064:intron | 25.0% |
| ! | AAAGCATATTTCCATATTGT+GGG | + | chr8.3:379655-379674 | MS.gene042064:intron | 25.0% |
| ! | ATATAGAAAGTTGTAAACTG+TGG | - | chr8.3:380984-381003 | None:intergenic | 25.0% |
| ! | ATATATCATATACTGCATCA+TGG | - | chr8.3:380409-380428 | None:intergenic | 25.0% |
| ! | ATGTTAAATAGTAAATGCTG+GGG | + | chr8.3:380121-380140 | MS.gene042064:intron | 25.0% |
| ! | ATTCATTTCAAAGTTCAAAC+AGG | - | chr8.3:380685-380704 | None:intergenic | 25.0% |
| ! | CACTTCTAAACTTATATTGT+AGG | - | chr8.3:379537-379556 | None:intergenic | 25.0% |
| ! | CATGTTAAATAGTAAATGCT+GGG | + | chr8.3:380120-380139 | MS.gene042064:intron | 25.0% |
| ! | TAAAGCATATTTCCATATTG+TGG | + | chr8.3:379654-379673 | MS.gene042064:intron | 25.0% |
| ! | TAGCATATTGCATATGATAA+TGG | + | chr8.3:379428-379447 | MS.gene042064:intron | 25.0% |
| ! | TATATCTCAAAATTTGTCCT+TGG | - | chr8.3:380242-380261 | None:intergenic | 25.0% |
| ! | TCAATTGTTATAAGTTTGAG+TGG | - | chr8.3:379901-379920 | None:intergenic | 25.0% |
| ! | TCATGTTAAATAGTAAATGC+TGG | + | chr8.3:380119-380138 | MS.gene042064:intron | 25.0% |
| !! | AAAGCAGTTGATCTTTTTAA+GGG | + | chr8.3:378539-378558 | MS.gene042064:CDS | 25.0% |
| !! | ATTTAGAATTTCTAAGCAAC+AGG | + | chr8.3:380854-380873 | MS.gene042064:intron | 25.0% |
| !! | GCATATATATAACCATTTTC+AGG | + | chr8.3:379766-379785 | MS.gene042064:intron | 25.0% |
| !! | TGTTGCTTAGAAATTCTAAA+TGG | - | chr8.3:380855-380874 | None:intergenic | 25.0% |
| !!! | ATGATCCACTTTATTTTGTT+AGG | - | chr8.3:381118-381137 | None:intergenic | 25.0% |
| !!! | ATGTTTTGTTGATTCAAACT+AGG | + | chr8.3:378382-378401 | MS.gene042064:intron | 25.0% |
| !!! | ATTGTTTTTACTTACTAGAG+AGG | - | chr8.3:381083-381102 | None:intergenic | 25.0% |
| !!! | TTGATGTTTTTATCGTAACA+AGG | - | chr8.3:382082-382101 | None:intergenic | 25.0% |
| !!! | TTTTCTTTTTCACTGTAAGT+TGG | + | chr8.3:378938-378957 | MS.gene042064:intron | 25.0% |
| AAACTTGCGATCATTAACTT+TGG | - | chr8.3:381776-381795 | None:intergenic | 30.0% | |
| AAACTTGTATCTAGTAAGGA+GGG | - | chr8.3:381444-381463 | None:intergenic | 30.0% | |
| AAAGAGTCAAAAATAACAGC+AGG | - | chr8.3:378731-378750 | None:intergenic | 30.0% | |
| AACATGTTTAACCATGAAAC+AGG | + | chr8.3:380463-380482 | MS.gene042064:intron | 30.0% | |
| AAGAGTCAAAAATAACAGCA+GGG | - | chr8.3:378730-378749 | None:intergenic | 30.0% | |
| AATGGATCATCAAATGAACA+AGG | + | chr8.3:379446-379465 | MS.gene042064:intron | 30.0% | |
| AATTAAGCATACAAGGTTAG+TGG | - | chr8.3:378616-378635 | None:intergenic | 30.0% | |
| ACTGAAACTTGTATCTAGTA+AGG | - | chr8.3:381448-381467 | None:intergenic | 30.0% | |
| ACTTGCCTAACAAAATAAAG+TGG | + | chr8.3:381110-381129 | MS.gene042064:intron | 30.0% | |
| AGAGTGGCATTTAATGTTAA+TGG | + | chr8.3:381222-381241 | MS.gene042064:intron | 30.0% | |
| AGTGCTCTTGAAATTCTAAT+GGG | - | chr8.3:380746-380765 | None:intergenic | 30.0% | |
| ATAACAAATGCTACTGTAGT+TGG | + | chr8.3:381293-381312 | MS.gene042064:intron | 30.0% | |
| ATATGCATGACATAATTGAG+TGG | - | chr8.3:379377-379396 | None:intergenic | 30.0% | |
| ATGGTATGTTGCTAATCATT+TGG | + | chr8.3:381580-381599 | MS.gene042064:intron | 30.0% | |
| ATTAACATTAAATGCCACTC+TGG | - | chr8.3:381223-381242 | None:intergenic | 30.0% | |
| ATTAAGCATACAAGGTTAGT+GGG | - | chr8.3:378615-378634 | None:intergenic | 30.0% | |
| CAAAGATAAACTGGTCAATA+TGG | + | chr8.3:382387-382406 | MS.gene042064:intron | 30.0% | |
| CTGTTGATACAAAACCAAAT+AGG | + | chr8.3:380918-380937 | MS.gene042064:intron | 30.0% | |
| GCAAATGAAGAAGTAAACAA+AGG | + | chr8.3:380773-380792 | MS.gene042064:intron | 30.0% | |
| GTCGTCTGAAAACTAATAAA+AGG | + | chr8.3:381609-381628 | MS.gene042064:intron | 30.0% | |
| GTTGAAGAAAATATTCACTG+TGG | + | chr8.3:381244-381263 | MS.gene042064:intron | 30.0% | |
| TAAGAGATTCAACATTGACA+TGG | + | chr8.3:381941-381960 | MS.gene042064:CDS | 30.0% | |
| TACGATAAAAACATCAAGCA+AGG | + | chr8.3:382085-382104 | MS.gene042064:intron | 30.0% | |
| TACTGCATCATGGAAATTTA+AGG | - | chr8.3:380399-380418 | None:intergenic | 30.0% | |
| TATATTTCCTTCCTGTTTCA+TGG | - | chr8.3:380477-380496 | None:intergenic | 30.0% | |
| TCATGTTCATTATCATTTGC+AGG | + | chr8.3:381881-381900 | MS.gene042064:intron | 30.0% | |
| TGAAGGTTTCAAAGATAAAC+TGG | + | chr8.3:382378-382397 | MS.gene042064:intron | 30.0% | |
| TGCAGTATATGATATATCAC+TGG | + | chr8.3:380412-380431 | MS.gene042064:intron | 30.0% | |
| TGGATCATAAAATTGGTCAA+AGG | + | chr8.3:381130-381149 | MS.gene042064:intron | 30.0% | |
| TGTTAAATAGTAAATGCTGG+GGG | + | chr8.3:380122-380141 | MS.gene042064:intron | 30.0% | |
| TGTTTCATGGTTAAACATGT+TGG | - | chr8.3:380464-380483 | None:intergenic | 30.0% | |
| TTGTTATAAGTTTGAGTGGT+CGG | - | chr8.3:379897-379916 | None:intergenic | 30.0% | |
| ! | AAACATGTTGGTTGTGATTT+AGG | - | chr8.3:380452-380471 | None:intergenic | 30.0% |
| ! | AACTTAATATGGTTAGCTGT+AGG | + | chr8.3:381800-381819 | MS.gene042064:intron | 30.0% |
| ! | AAGCACATTTGCATGTTTTT+AGG | + | chr8.3:381826-381845 | MS.gene042064:intron | 30.0% |
| ! | AGAAAAGTTAAAGTACTCCA+AGG | + | chr8.3:380222-380241 | MS.gene042064:intron | 30.0% |
| ! | AGCTGATTCTGTATTCATAT+TGG | + | chr8.3:378453-378472 | MS.gene042064:CDS | 30.0% |
| ! | ATTTTTAACCAGTAAAGGAG+AGG | - | chr8.3:381408-381427 | None:intergenic | 30.0% |
| ! | CAAAGCAGTTGATCTTTTTA+AGG | + | chr8.3:378538-378557 | MS.gene042064:CDS | 30.0% |
| ! | CATTGCTAGCCAATATTTTT+GGG | - | chr8.3:381667-381686 | None:intergenic | 30.0% |
| ! | CTCTTTTGTGAATATCAGTA+GGG | - | chr8.3:378881-378900 | None:intergenic | 30.0% |
| ! | GGTCTCATGTATATTTTATG+CGG | + | chr8.3:381975-381994 | MS.gene042064:intron | 30.0% |
| ! | GTCTCATGTATATTTTATGC+GGG | + | chr8.3:381976-381995 | MS.gene042064:intron | 30.0% |
| ! | TAAATTTCATTTTCTCTGGC+AGG | - | chr8.3:380653-380672 | None:intergenic | 30.0% |
| ! | TCATACGTAAATGCAACTTT+TGG | - | chr8.3:379510-379529 | None:intergenic | 30.0% |
| ! | TCTCATGTATATTTTATGCG+GGG | + | chr8.3:381977-381996 | MS.gene042064:intron | 30.0% |
| !! | GGAGTACTTTAACTTTTCTA+AGG | - | chr8.3:380221-380240 | None:intergenic | 30.0% |
| !! | TCAAATTCATGTTCTGGAAA+TGG | + | chr8.3:379001-379020 | MS.gene042064:intron | 30.0% |
| !!! | TGACTCTTTTGCTATTATCA+TGG | + | chr8.3:378742-378761 | MS.gene042064:CDS | 30.0% |
| !!! | TGCTACTATTTTTATTGGTG+AGG | - | chr8.3:379330-379349 | None:intergenic | 30.0% |
| !!! | TTTTTTAACTGTTAGAGGCT+AGG | - | chr8.3:379694-379713 | None:intergenic | 30.0% |
| AACAAATGTTCTTTCCACCA+GGG | - | chr8.3:381168-381187 | None:intergenic | 35.0% | |
| AAGATGTGACATACATACCA+GGG | - | chr8.3:379103-379122 | None:intergenic | 35.0% | |
| AAGCTATTAAAAGAACACGC+TGG | + | chr8.3:381529-381548 | MS.gene042064:CDS | 35.0% | |
| AGCAATGCCAACTATTCAAA+TGG | + | chr8.3:381680-381699 | MS.gene042064:intron | 35.0% | |
| AGCTAATAGCTCAAGCAAAT+AGG | - | chr8.3:382181-382200 | None:intergenic | 35.0% | |
| AGCTATTAAAAGAACACGCT+GGG | + | chr8.3:381530-381549 | MS.gene042064:CDS | 35.0% | |
| AGTAAGTCATGCGATGAATT+TGG | - | chr8.3:382500-382519 | None:intergenic | 35.0% | |
| AGTCTGTATCACGGTATATT+TGG | + | chr8.3:379603-379622 | MS.gene042064:intron | 35.0% | |
| AGTTAAGAAGTGGAGTTACA+AGG | - | chr8.3:381359-381378 | None:intergenic | 35.0% | |
| ATGGATAAAACCAGTCATTG+TGG | + | chr8.3:382406-382425 | MS.gene042064:intron | 35.0% | |
| CAAAAGAGCTATCAATTTCC+AGG | + | chr8.3:378893-378912 | MS.gene042064:CDS | 35.0% | |
| CAACTGCTTTGTACTCATAT+TGG | - | chr8.3:378529-378548 | None:intergenic | 35.0% | |
| CACAGATAACTTACACTTCT+CGG | + | chr8.3:380563-380582 | MS.gene042064:intron | 35.0% | |
| CAGTGCTCTTGAAATTCTAA+TGG | - | chr8.3:380747-380766 | None:intergenic | 35.0% | |
| CATTCAAAAGATCAGTGTCT+AGG | + | chr8.3:379744-379763 | MS.gene042064:intron | 35.0% | |
| CATTCTGCTTGGACAATTAA+GGG | - | chr8.3:382526-382545 | None:intergenic | 35.0% | |
| CGTGTAATCTTGATAGAGTA+GGG | - | chr8.3:382553-382572 | None:intergenic | 35.0% | |
| CTATGTACAAGTCTGTATCA+CGG | + | chr8.3:379594-379613 | MS.gene042064:intron | 35.0% | |
| GAAACTTGTATCTAGTAAGG+AGG | - | chr8.3:381445-381464 | None:intergenic | 35.0% | |
| GATCAAAGAAGCTGTAGTAA+TGG | - | chr8.3:382038-382057 | None:intergenic | 35.0% | |
| GCACTATATACTTAGTTACC+TGG | - | chr8.3:378914-378933 | None:intergenic | 35.0% | |
| GTAAACTTGGAAGCTCAAAA+GGG | - | chr8.3:381042-381061 | None:intergenic | 35.0% | |
| GTAAGTCATGCGATGAATTT+GGG | - | chr8.3:382499-382518 | None:intergenic | 35.0% | |
| GTAATTAGAAAAGGCTTCAC+AGG | + | chr8.3:379287-379306 | MS.gene042064:CDS | 35.0% | |
| GTCCAGAGTGTAATTAGAAA+AGG | + | chr8.3:379278-379297 | MS.gene042064:CDS | 35.0% | |
| GTCTGTATCACGGTATATTT+GGG | + | chr8.3:379604-379623 | MS.gene042064:intron | 35.0% | |
| GTTAAATAGTAAATGCTGGG+GGG | + | chr8.3:380123-380142 | MS.gene042064:intron | 35.0% | |
| GTTATTAAAAAAGAGGAGCG+AGG | - | chr8.3:381278-381297 | None:intergenic | 35.0% | |
| TAACAAATGTTCTTTCCACC+AGG | - | chr8.3:381169-381188 | None:intergenic | 35.0% | |
| TAAGATGTGACATACATACC+AGG | - | chr8.3:379104-379123 | None:intergenic | 35.0% | |
| TAATTGAGTGGCATTAGCTA+TGG | - | chr8.3:379365-379384 | None:intergenic | 35.0% | |
| TACAAGTTTCAGTGTGTTGT+TGG | + | chr8.3:381455-381474 | MS.gene042064:intron | 35.0% | |
| TACTACAGCTTCTTTGATCA+AGG | + | chr8.3:382039-382058 | MS.gene042064:intron | 35.0% | |
| TAGATATAGTCCTCATTCAC+AGG | - | chr8.3:380311-380330 | None:intergenic | 35.0% | |
| TCATTCTGCTTGGACAATTA+AGG | - | chr8.3:382527-382546 | None:intergenic | 35.0% | |
| TCCAGAACATGAATTTGAAC+AGG | - | chr8.3:378999-379018 | None:intergenic | 35.0% | |
| TCCTGTTCAAATTCATGTTC+TGG | + | chr8.3:378995-379014 | MS.gene042064:intron | 35.0% | |
| TCGTGTAATCTTGATAGAGT+AGG | - | chr8.3:382554-382573 | None:intergenic | 35.0% | |
| TCTTCAAAACCTTAATACCC+TGG | + | chr8.3:379083-379102 | MS.gene042064:CDS | 35.0% | |
| TGATCAGCCATTTGAATAGT+TGG | - | chr8.3:381690-381709 | None:intergenic | 35.0% | |
| TGTTATAAGTTTGAGTGGTC+GGG | - | chr8.3:379896-379915 | None:intergenic | 35.0% | |
| TGTTCATTATCATTTGCAGG+CGG | + | chr8.3:381884-381903 | MS.gene042064:intron | 35.0% | |
| TGTTTAACCATGAAACAGGA+AGG | + | chr8.3:380467-380486 | MS.gene042064:intron | 35.0% | |
| TTAAAGTAGATTGAACTCCC+TGG | + | chr8.3:380592-380611 | MS.gene042064:intron | 35.0% | |
| ! | AATGCAACTTTTGGACCAAA+AGG | - | chr8.3:379501-379520 | None:intergenic | 35.0% |
| ! | ACATACATACCAGGGTATTA+AGG | - | chr8.3:379095-379114 | None:intergenic | 35.0% |
| ! | AGCCTTTTCTAATTACACTC+TGG | - | chr8.3:379283-379302 | None:intergenic | 35.0% |
| ! | ATGTATGGCTTGTATTTCTG+TGG | + | chr8.3:382010-382029 | MS.gene042064:intron | 35.0% |
| ! | ATTGACATGGTAGTGTTCTA+TGG | + | chr8.3:381954-381973 | MS.gene042064:intron | 35.0% |
| ! | CTTTTGAGCTTCCAAGTTTA+CGG | + | chr8.3:381041-381060 | MS.gene042064:intron | 35.0% |
| ! | GCATTGCTAGCCAATATTTT+TGG | - | chr8.3:381668-381687 | None:intergenic | 35.0% |
| ! | GCTCTTTTGTGAATATCAGT+AGG | - | chr8.3:378882-378901 | None:intergenic | 35.0% |
| ! | GTAGTTGGTATTACTGCTTT+GGG | + | chr8.3:381308-381327 | MS.gene042064:intron | 35.0% |
| ! | GTTGCTAATCATTTGGAGTT+TGG | + | chr8.3:381587-381606 | MS.gene042064:intron | 35.0% |
| ! | TAGTTGGTATTACTGCTTTG+GGG | + | chr8.3:381309-381328 | MS.gene042064:intron | 35.0% |
| ! | TGAGAAAAGTGTACATGTTG+AGG | - | chr8.3:380356-380375 | None:intergenic | 35.0% |
| ! | TGTAGTTGGTATTACTGCTT+TGG | + | chr8.3:381307-381326 | MS.gene042064:intron | 35.0% |
| !! | CACTTTTTATCCTGTGAATG+AGG | + | chr8.3:380298-380317 | MS.gene042064:intron | 35.0% |
| !! | CTTCTATTGATTTCATCCAC+AGG | + | chr8.3:379029-379048 | MS.gene042064:intron | 35.0% |
| !!! | AGGGTATTAAGGTTTTGAAG+AGG | - | chr8.3:379084-379103 | None:intergenic | 35.0% |
| AAAGGAGAGGATGTAAGGTT+TGG | - | chr8.3:381395-381414 | None:intergenic | 40.0% | |
| AAGGAGAGGATGTAAGGTTT+GGG | - | chr8.3:381394-381413 | None:intergenic | 40.0% | |
| AAGGGAGAACAATATCATCC+TGG | + | chr8.3:378557-378576 | MS.gene042064:CDS | 40.0% | |
| AATGCTGTTGTGCCTGAAAA+TGG | - | chr8.3:379781-379800 | None:intergenic | 40.0% | |
| ACTCATATTGGAGACCTTTG+AGG | - | chr8.3:378517-378536 | None:intergenic | 40.0% | |
| AGAACAGGAACAAAACCAAC+AGG | - | chr8.3:378698-378717 | None:intergenic | 40.0% | |
| AGGACAGACAACAATTAGCA+GGG | + | chr8.3:380048-380067 | MS.gene042064:intron | 40.0% | |
| ATTCAAACTCACCCATCCAA+TGG | + | chr8.3:379823-379842 | MS.gene042064:intron | 40.0% | |
| CAAGTCATCAGACAAACTGA+TGG | + | chr8.3:379862-379881 | MS.gene042064:intron | 40.0% | |
| CCCTGATGAAAAACTTCCAT+GGG | + | chr8.3:379256-379275 | MS.gene042064:CDS | 40.0% | |
| CGGGGTTGTAATGAAATGTA+TGG | + | chr8.3:381995-382014 | MS.gene042064:intron | 40.0% | |
| CGTAAACTTGGAAGCTCAAA+AGG | - | chr8.3:381043-381062 | None:intergenic | 40.0% | |
| GAACAGGAACAAAACCAACA+GGG | - | chr8.3:378697-378716 | None:intergenic | 40.0% | |
| GAAGCTTCGATCATTTGCAT+GGG | - | chr8.3:379938-379957 | None:intergenic | 40.0% | |
| GACAACAGCGGATATATGTT+TGG | - | chr8.3:382139-382158 | None:intergenic | 40.0% | |
| GACATATGTGACCCACAATA+TGG | - | chr8.3:379669-379688 | None:intergenic | 40.0% | |
| TAAGAAGTGGAGTTACAAGG+AGG | - | chr8.3:381356-381375 | None:intergenic | 40.0% | |
| TAGAAGCAGCATCTAACTGA+GGG | - | chr8.3:381923-381942 | None:intergenic | 40.0% | |
| TAGCTCAAGCAAATAGGCAA+AGG | - | chr8.3:382175-382194 | None:intergenic | 40.0% | |
| TAGGACAGACAACAATTAGC+AGG | + | chr8.3:380047-380066 | MS.gene042064:intron | 40.0% | |
| TATGCATTGCTCGCAGTATT+TGG | + | chr8.3:378824-378843 | MS.gene042064:intron | 40.0% | |
| TCAACAGAAAGATACGCCTA+GGG | + | chr8.3:380373-380392 | MS.gene042064:intron | 40.0% | |
| TCTAAATGGCAGCACATGTA+TGG | - | chr8.3:380841-380860 | None:intergenic | 40.0% | |
| TGAACTCCCTGGTAAAACAA+GGG | + | chr8.3:380603-380622 | MS.gene042064:intron | 40.0% | |
| TGAAGCTTCGATCATTTGCA+TGG | - | chr8.3:379939-379958 | None:intergenic | 40.0% | |
| TGAATATCAGTAGGGAGCAA+AGG | - | chr8.3:378873-378892 | None:intergenic | 40.0% | |
| TGCACTCTAAACCCACAAAA+CGG | - | chr8.3:379174-379193 | None:intergenic | 40.0% | |
| TTAGAAGCAGCATCTAACTG+AGG | - | chr8.3:381924-381943 | None:intergenic | 40.0% | |
| TTCCACTCTAGTGATTGCAT+GGG | + | chr8.3:380154-380173 | MS.gene042064:intron | 40.0% | |
| TTCCTCCTATACCATTGGAT+GGG | - | chr8.3:379837-379856 | None:intergenic | 40.0% | |
| TTGAACTCCCTGGTAAAACA+AGG | + | chr8.3:380602-380621 | MS.gene042064:intron | 40.0% | |
| TTGCTTTCCTCCTATACCAT+TGG | - | chr8.3:379842-379861 | None:intergenic | 40.0% | |
| TTGGAGTTGGACAAAACACA+AGG | - | chr8.3:382120-382139 | None:intergenic | 40.0% | |
| TTTCCACTCTAGTGATTGCA+TGG | + | chr8.3:380153-380172 | MS.gene042064:intron | 40.0% | |
| TTTCCTCCTATACCATTGGA+TGG | - | chr8.3:379838-379857 | None:intergenic | 40.0% | |
| TTTGAGAGTTCCACAATGAC+TGG | - | chr8.3:382419-382438 | None:intergenic | 40.0% | |
| ! | AAAGGAAGCAACCGTTTTGT+GGG | + | chr8.3:379160-379179 | MS.gene042064:intron | 40.0% |
| ! | AAAGGCATAGTTTGTATCCC+TGG | + | chr8.3:381148-381167 | MS.gene042064:intron | 40.0% |
| ! | ACCCATGGAAGTTTTTCATC+AGG | - | chr8.3:379260-379279 | None:intergenic | 40.0% |
| ! | ACGGTATATTTGGGATGTCT+AGG | + | chr8.3:379613-379632 | MS.gene042064:intron | 40.0% |
| ! | AGCGGATATATGTTTGGAGT+TGG | - | chr8.3:382133-382152 | None:intergenic | 40.0% |
| ! | AGTTGGTATTACTGCTTTGG+GGG | + | chr8.3:381310-381329 | MS.gene042064:intron | 40.0% |
| ! | ATTTGTTAGCTGCAACACTC+GGG | + | chr8.3:381181-381200 | MS.gene042064:intron | 40.0% |
| ! | CATTTGTTAGCTGCAACACT+CGG | + | chr8.3:381180-381199 | MS.gene042064:intron | 40.0% |
| ! | CCCATGGAAGTTTTTCATCA+GGG | - | chr8.3:379259-379278 | None:intergenic | 40.0% |
| ! | TAAAGGAAGCAACCGTTTTG+TGG | + | chr8.3:379159-379178 | MS.gene042064:intron | 40.0% |
| ! | TACTGGAGACGAAGTTTTCA+TGG | + | chr8.3:381561-381580 | MS.gene042064:CDS | 40.0% |
| ! | TATCATCCTGGTTAGTTCGT+TGG | + | chr8.3:378569-378588 | MS.gene042064:intron | 40.0% |
| ! | TCATGGAAATTTAAGGCCCT+AGG | - | chr8.3:380392-380411 | None:intergenic | 40.0% |
| ! | TGAGGACTATATCTAGAGCA+CGG | + | chr8.3:380316-380335 | MS.gene042064:intron | 40.0% |
| ! | TGGCCCATGTTTTACCTATT+TGG | - | chr8.3:380935-380954 | None:intergenic | 40.0% |
| ! | TTGACTATCTTTTGCCAGAG+TGG | + | chr8.3:381206-381225 | MS.gene042064:intron | 40.0% |
| !! | GCGATCATTAACTTTGGAGT+TGG | - | chr8.3:381770-381789 | None:intergenic | 40.0% |
| !!! | AGCCAATATTTTTGGGCTAC+TGG | - | chr8.3:381660-381679 | None:intergenic | 40.0% |
| !!! | GCCAATATTTTTGGGCTACT+GGG | - | chr8.3:381659-381678 | None:intergenic | 40.0% |
| ACTCACCCATCCAATGGTAT+AGG | + | chr8.3:379829-379848 | MS.gene042064:intron | 45.0% | |
| AGAAGCAGCATCTAACTGAG+GGG | - | chr8.3:381922-381941 | None:intergenic | 45.0% | |
| AGAGGATGTAAGGTTTGGGT+TGG | - | chr8.3:381390-381409 | None:intergenic | 45.0% | |
| AGTAGGGAACTCATTCTGCT+TGG | - | chr8.3:382537-382556 | None:intergenic | 45.0% | |
| ATTATGCGATCCCAGCATTC+CGG | + | chr8.3:382579-382598 | MS.gene042064:CDS | 45.0% | |
| CCAGTAAAGGAGAGGATGTA+AGG | - | chr8.3:381400-381419 | None:intergenic | 45.0% | |
| CCTTACATCCTCTCCTTTAC+TGG | + | chr8.3:381397-381416 | MS.gene042064:intron | 45.0% | |
| CGAATTGCTCTCAACCTCAA+AGG | + | chr8.3:378500-378519 | MS.gene042064:CDS | 45.0% | |
| CTAATTACACTCTGGACCCA+TGG | - | chr8.3:379275-379294 | None:intergenic | 45.0% | |
| CTCAACAGAAAGATACGCCT+AGG | + | chr8.3:380372-380391 | MS.gene042064:intron | 45.0% | |
| CTTCGATCATTTGCATGGGT+TGG | - | chr8.3:379934-379953 | None:intergenic | 45.0% | |
| GAAACAATACTGACAGCCTG+TGG | - | chr8.3:379048-379067 | None:intergenic | 45.0% | |
| GAAGTTCTCCTCCGTAAACT+TGG | - | chr8.3:381055-381074 | None:intergenic | 45.0% | |
| GAATGCTGGGATCGCATAAT+AGG | - | chr8.3:382579-382598 | None:intergenic | 45.0% | |
| GCCCAGTAGCCCAAAAATAT+TGG | + | chr8.3:381655-381674 | MS.gene042064:intron | 45.0% | |
| GCCCTGATGAAAAACTTCCA+TGG | + | chr8.3:379255-379274 | MS.gene042064:CDS | 45.0% | |
| GGGGTAGAGAAGTTAAGAAG+TGG | - | chr8.3:381369-381388 | None:intergenic | 45.0% | |
| GGTTGAGAGCAATTCGAACT+CGG | - | chr8.3:378496-378515 | None:intergenic | 45.0% | |
| GTGGGCAAGGAAAAAAAGAG+AGG | - | chr8.3:378597-378616 | None:intergenic | 45.0% | |
| TACCCATGCAATCACTAGAG+TGG | - | chr8.3:380159-380178 | None:intergenic | 45.0% | |
| TCAAGCAAATAGGCAAAGGC+CGG | - | chr8.3:382171-382190 | None:intergenic | 45.0% | |
| TTGAGCTTCCAAGTTTACGG+AGG | + | chr8.3:381044-381063 | MS.gene042064:intron | 45.0% | |
| TTTCTCAAGCTCAACCCTGT+TGG | + | chr8.3:378680-378699 | MS.gene042064:CDS | 45.0% | |
| TTTGTTCCTGTTCTCGTCGA+TGG | + | chr8.3:378704-378723 | MS.gene042064:CDS | 45.0% | |
| ! | CAAAAGGGTGTGACGGAATT+CGG | - | chr8.3:381027-381046 | None:intergenic | 45.0% |
| ! | GAGGATGTAAGGTTTGGGTT+GGG | - | chr8.3:381389-381408 | None:intergenic | 45.0% |
| ! | TTGTGAGCTCATTGACTGAC+TGG | - | chr8.3:380955-380974 | None:intergenic | 45.0% |
| !! | AGGATGTAAGGTTTGGGTTG+GGG | - | chr8.3:381388-381407 | None:intergenic | 45.0% |
| !!! | TCACGTCCCTTGTTTTACCA+GGG | - | chr8.3:380612-380631 | None:intergenic | 45.0% |
| !!! | TTCACGTCCCTTGTTTTACC+AGG | - | chr8.3:380613-380632 | None:intergenic | 45.0% |
| CACCCATCCAATGGTATAGG+AGG | + | chr8.3:379832-379851 | MS.gene042064:intron | 50.0% | |
| CGCTGTTGTCTAAATGCCTC+CGG | + | chr8.3:382149-382168 | MS.gene042064:intron | 50.0% | |
| GAGAATCAACCAGATGCAGC+AGG | + | chr8.3:382614-382633 | MS.gene042064:CDS | 50.0% | |
| GAGAGCAATTCGAACTCGGA+AGG | - | chr8.3:378492-378511 | None:intergenic | 50.0% | |
| GAGGAACCAACGAACTAACC+AGG | - | chr8.3:378578-378597 | None:intergenic | 50.0% | |
| GCATTGCTCGCAGTATTTGG+AGG | + | chr8.3:378827-378846 | MS.gene042064:intron | 50.0% | |
| GGGAGCAAAGGATGTTGTTG+AGG | - | chr8.3:378861-378880 | None:intergenic | 50.0% | |
| TTATGCGATCCCAGCATTCC+GGG | + | chr8.3:382580-382599 | MS.gene042064:CDS | 50.0% | |
| ! | GCATACAAGGTTAGTGGGCA+AGG | - | chr8.3:378610-378629 | None:intergenic | 50.0% |
| ! | GCTGCATCTGGTTGATTCTC+TGG | - | chr8.3:382614-382633 | None:intergenic | 50.0% |
| ! | GGAAGCTCAAAAGGGTGTGA+CGG | - | chr8.3:381034-381053 | None:intergenic | 50.0% |
| ! | GGCATAGTTTGTATCCCTGG+TGG | + | chr8.3:381151-381170 | MS.gene042064:intron | 50.0% |
| ! | GTGTGACGGAATTCGGATCA+CGG | - | chr8.3:381020-381039 | None:intergenic | 50.0% |
| ! | TCTAGAGCACGGTAACAGAC+TGG | + | chr8.3:380327-380346 | MS.gene042064:intron | 50.0% |
| ! | TGTGACGGAATTCGGATCAC+GGG | - | chr8.3:381019-381038 | None:intergenic | 50.0% |
| !! | CGATCATTTGCATGGGTTGG+TGG | - | chr8.3:379931-379950 | None:intergenic | 50.0% |
| !! | CGGAGGCATTTAGACAACAG+CGG | - | chr8.3:382151-382170 | None:intergenic | 50.0% |
| !! | GGTATTACTGCTTTGGGGGT+GGG | + | chr8.3:381314-381333 | MS.gene042064:intron | 50.0% |
| !! | GTATTACTGCTTTGGGGGTG+GGG | + | chr8.3:381315-381334 | MS.gene042064:intron | 50.0% |
| !! | TATTACTGCTTTGGGGGTGG+GGG | + | chr8.3:381316-381335 | MS.gene042064:intron | 50.0% |
| !! | TGGTATTACTGCTTTGGGGG+TGG | + | chr8.3:381313-381332 | MS.gene042064:intron | 50.0% |
| AGCAAATAGGCAAAGGCCGG+AGG | - | chr8.3:382168-382187 | None:intergenic | 55.0% | |
| CACGCTGGGAGATATGCTAC+TGG | + | chr8.3:381544-381563 | MS.gene042064:CDS | 55.0% | |
| CTTCACCAACAGCCAACGAG+TGG | - | chr8.3:382363-382382 | None:intergenic | 55.0% | |
| GATTCTCTGGCAACGTCTCC+CGG | - | chr8.3:382601-382620 | None:intergenic | 55.0% | |
| ! | CACTCGTTGGCTGTTGGTGA+AGG | + | chr8.3:382361-382380 | MS.gene042064:intron | 55.0% |
| ! | GGCTACTGGGCCCTTTTGAA+AGG | - | chr8.3:381646-381665 | None:intergenic | 55.0% |
| !! | ATTACTGCTTTGGGGGTGGG+GGG | + | chr8.3:381317-381336 | MS.gene042064:intron | 55.0% |
| !! | TTTGCATGGGTTGGTGGTCC+TGG | - | chr8.3:379925-379944 | None:intergenic | 55.0% |
| CAACAGCCAACGAGTGGTGC+AGG | - | chr8.3:382357-382376 | None:intergenic | 60.0% | |
| CTCAGGTAGCCTGCTGCATC+TGG | - | chr8.3:382626-382645 | None:intergenic | 60.0% | |
| GCAACGTCTCCCGGAATGCT+GGG | - | chr8.3:382592-382611 | None:intergenic | 60.0% | |
| TGCTTGCCTGCACCACTCGT+TGG | + | chr8.3:382348-382367 | MS.gene042064:intron | 60.0% | |
| ! | CTGCACCACTCGTTGGCTGT+TGG | + | chr8.3:382355-382374 | MS.gene042064:intron | 60.0% |
| GCAGGGCCATCGACGAGAAC+AGG | - | chr8.3:378713-378732 | None:intergenic | 65.0% | |
| GGCAACGTCTCCCGGAATGC+TGG | - | chr8.3:382593-382612 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 378332 | 382652 | 378332 | ID=MS.gene042064 |
| chr8.3 | mRNA | 378332 | 382652 | 378332 | ID=MS.gene042064.t1;Parent=MS.gene042064 |
| chr8.3 | exon | 378332 | 378334 | 378332 | ID=MS.gene042064.t1.exon1;Parent=MS.gene042064.t1 |
| chr8.3 | CDS | 378332 | 378334 | 378332 | ID=cds.MS.gene042064.t1;Parent=MS.gene042064.t1 |
| chr8.3 | exon | 378404 | 378578 | 378404 | ID=MS.gene042064.t1.exon2;Parent=MS.gene042064.t1 |
| chr8.3 | CDS | 378404 | 378578 | 378404 | ID=cds.MS.gene042064.t1;Parent=MS.gene042064.t1 |
| chr8.3 | exon | 378678 | 378763 | 378678 | ID=MS.gene042064.t1.exon3;Parent=MS.gene042064.t1 |
| chr8.3 | CDS | 378678 | 378763 | 378678 | ID=cds.MS.gene042064.t1;Parent=MS.gene042064.t1 |
| chr8.3 | exon | 378840 | 378914 | 378840 | ID=MS.gene042064.t1.exon4;Parent=MS.gene042064.t1 |
| chr8.3 | CDS | 378840 | 378914 | 378840 | ID=cds.MS.gene042064.t1;Parent=MS.gene042064.t1 |
| chr8.3 | exon | 379051 | 379104 | 379051 | ID=MS.gene042064.t1.exon5;Parent=MS.gene042064.t1 |
| chr8.3 | CDS | 379051 | 379104 | 379051 | ID=cds.MS.gene042064.t1;Parent=MS.gene042064.t1 |
| chr8.3 | exon | 379233 | 379308 | 379233 | ID=MS.gene042064.t1.exon6;Parent=MS.gene042064.t1 |
| chr8.3 | CDS | 379233 | 379308 | 379233 | ID=cds.MS.gene042064.t1;Parent=MS.gene042064.t1 |
| chr8.3 | exon | 381521 | 381582 | 381521 | ID=MS.gene042064.t1.exon7;Parent=MS.gene042064.t1 |
| chr8.3 | CDS | 381521 | 381582 | 381521 | ID=cds.MS.gene042064.t1;Parent=MS.gene042064.t1 |
| chr8.3 | exon | 381903 | 381962 | 381903 | ID=MS.gene042064.t1.exon8;Parent=MS.gene042064.t1 |
| chr8.3 | CDS | 381903 | 381962 | 381903 | ID=cds.MS.gene042064.t1;Parent=MS.gene042064.t1 |
| chr8.3 | exon | 382542 | 382652 | 382542 | ID=MS.gene042064.t1.exon9;Parent=MS.gene042064.t1 |
| chr8.3 | CDS | 382542 | 382652 | 382542 | ID=cds.MS.gene042064.t1;Parent=MS.gene042064.t1 |
| Gene Sequence |
| Protein sequence |
