AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068678

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068678.t1 MTR_2g070210 96.833 221 7 0 1 221 1 221 1.01e-157 435
MS.gene068678.t1 MTR_2g070150 79.612 206 40 1 1 206 1 204 3.70e-122 345
MS.gene068678.t1 MTR_2g070180 72.811 217 57 1 1 217 1 215 9.23e-120 339
MS.gene068678.t1 MTR_2g070140 76.098 205 47 1 17 221 1 203 1.02e-116 331
MS.gene068678.t1 MTR_2g070130 67.421 221 70 1 1 221 1 219 3.53e-113 323
MS.gene068678.t1 MTR_2g070200 69.955 223 63 3 1 221 1 221 1.45e-111 318
MS.gene068678.t1 MTR_3g467420 63.594 217 77 1 5 221 10 224 6.96e-100 289
MS.gene068678.t1 MTR_2g070060 59.276 221 88 1 1 221 1 219 3.45e-96 280
MS.gene068678.t1 MTR_2g070070 61.086 221 84 1 1 221 1 219 4.54e-94 274
MS.gene068678.t1 MTR_3g467430 60.930 215 82 1 2 216 7 219 2.93e-93 272
MS.gene068678.t1 MTR_2g070110 58.824 221 88 2 1 221 1 218 7.96e-89 261
MS.gene068678.t1 MTR_4g124130 57.014 221 94 1 1 221 1 220 2.35e-88 260
MS.gene068678.t1 MTR_8g056940 58.796 216 87 1 1 216 1 214 6.36e-88 259
MS.gene068678.t1 MTR_2g070120 56.422 218 92 2 1 218 1 215 2.73e-86 254
MS.gene068678.t1 MTR_5g076900 51.364 220 105 2 2 221 4 221 7.32e-77 231
MS.gene068678.t1 MTR_0186s0030 60.839 143 54 1 1 143 1 141 3.75e-55 172
MS.gene068678.t1 MTR_1g090060 41.232 211 117 4 4 210 3 210 3.39e-50 163
MS.gene068678.t1 MTR_5g037380 43.243 222 115 7 2 214 3 222 6.49e-47 155
MS.gene068678.t1 MTR_8g087425 39.352 216 126 3 2 215 3 215 5.55e-46 152
MS.gene068678.t1 MTR_1g090100 41.429 210 116 4 5 210 3 209 1.04e-45 151
MS.gene068678.t1 MTR_8g087410 42.009 219 118 6 2 217 4 216 1.86e-45 151
MS.gene068678.t1 MTR_3g099757 40.183 219 124 5 3 218 4 218 9.27e-45 149
MS.gene068678.t1 MTR_7g065720 41.038 212 117 6 3 210 6 213 1.10e-44 149
MS.gene068678.t1 MTR_4g059730 40.465 215 119 5 1 210 1 211 2.08e-44 148
MS.gene068678.t1 MTR_1g090090 42.180 211 115 5 4 210 3 210 2.21e-44 148
MS.gene068678.t1 MTR_7g065660 41.232 211 117 5 3 210 6 212 3.12e-44 147
MS.gene068678.t1 MTR_7g065750 42.381 210 113 6 3 208 6 211 3.77e-44 147
MS.gene068678.t1 MTR_7g065630 40.758 211 114 6 3 210 24 226 4.22e-44 148
MS.gene068678.t1 MTR_7g065740 41.038 212 117 6 3 210 6 213 1.29e-43 146
MS.gene068678.t1 MTR_5g040430 34.667 225 135 4 2 219 5 224 2.19e-42 143
MS.gene068678.t1 MTR_1g090070 38.028 213 124 5 4 211 9 218 4.33e-42 142
MS.gene068678.t1 MTR_4g019780 38.571 210 124 3 3 210 7 213 6.46e-42 142
MS.gene068678.t1 MTR_1g090150 36.364 220 132 5 3 218 2 217 1.42e-41 141
MS.gene068678.t1 MTR_7g065710 38.498 213 120 6 1 210 1 205 4.94e-41 139
MS.gene068678.t1 MTR_6g080440 40.306 196 110 5 18 210 17 208 1.18e-40 138
MS.gene068678.t1 MTR_4g019790 40.476 210 118 5 4 210 7 212 1.41e-40 138
MS.gene068678.t1 MTR_7g065590 40.094 212 118 7 3 210 6 212 8.09e-40 136
MS.gene068678.t1 MTR_8g061950 35.586 222 130 3 4 215 5 223 9.87e-40 136
MS.gene068678.t1 MTR_7g065290 40.566 212 117 7 3 210 6 212 2.64e-39 135
MS.gene068678.t1 MTR_7g065270 40.094 212 118 7 3 210 6 212 7.51e-39 134
MS.gene068678.t1 MTR_7g065230 40.000 210 116 6 3 210 6 207 1.04e-38 133
MS.gene068678.t1 MTR_7g065680 38.498 213 120 6 1 210 4 208 2.47e-38 132
MS.gene068678.t1 MTR_7g065700 39.437 213 118 6 1 210 4 208 4.15e-38 132
MS.gene068678.t1 MTR_1g115195 39.234 209 119 5 4 207 3 208 6.27e-37 129
MS.gene068678.t1 MTR_7g065600 37.915 211 124 6 3 210 6 212 1.75e-36 128
MS.gene068678.t1 MTR_7g065265 38.679 212 121 7 3 210 6 212 2.80e-36 127
MS.gene068678.t1 MTR_7g065640 35.714 210 114 5 2 210 5 194 5.88e-36 126
MS.gene068678.t1 MTR_7g065260 41.667 204 110 7 3 202 13 211 6.76e-32 116
MS.gene068678.t1 MTR_2g072120 58.108 74 30 1 49 121 1 74 5.13e-26 96.7
MS.gene068678.t1 MTR_4g134380 30.047 213 130 8 4 204 15 220 2.10e-15 72.8
MS.gene068678.t1 MTR_4g134370 29.108 213 130 7 4 203 15 219 1.28e-14 70.5
MS.gene068678.t1 MTR_4g134380 32.317 164 96 6 4 155 15 175 1.14e-13 67.0
MS.gene068678.t1 MTR_4g043640 59.524 42 17 0 150 191 44 85 8.54e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068678.t1 AT1G17180 63.348 221 79 1 1 221 1 219 1.22e-102 296
MS.gene068678.t1 AT1G78360 61.538 221 84 1 1 221 1 220 1.79e-98 285
MS.gene068678.t1 AT1G78380 61.111 216 82 1 1 216 1 214 2.03e-97 283
MS.gene068678.t1 AT1G78340 59.545 220 87 1 1 220 1 218 9.45e-96 278
MS.gene068678.t1 AT1G17170 60.181 221 85 2 1 221 1 218 2.32e-95 278
MS.gene068678.t1 AT1G78370 59.259 216 86 1 1 216 1 214 3.90e-94 275
MS.gene068678.t1 AT1G78320 58.559 222 89 2 1 221 1 220 1.36e-91 268
MS.gene068678.t1 AT1G53680 53.153 222 100 3 2 221 5 224 1.43e-85 253
MS.gene068678.t1 AT1G17190 53.670 218 99 1 2 219 3 218 1.48e-85 253
MS.gene068678.t1 AT3G43800 53.333 210 94 3 3 209 4 212 1.13e-74 225
MS.gene068678.t1 AT1G78320 50.000 222 81 3 1 221 1 193 1.06e-69 211
MS.gene068678.t1 AT2G29420 39.904 208 118 5 2 206 7 210 3.16e-48 158
MS.gene068678.t1 AT2G29490 40.284 211 118 5 3 209 6 212 1.87e-46 153
MS.gene068678.t1 AT1G59700 41.818 220 119 5 3 214 5 223 4.31e-46 153
MS.gene068678.t1 AT2G29480 40.284 211 118 5 3 209 6 212 1.05e-45 151
MS.gene068678.t1 AT3G09270 40.845 213 117 6 1 207 1 210 2.20e-45 150
MS.gene068678.t1 AT1G69930 39.908 218 121 5 2 211 9 224 3.58e-45 150
MS.gene068678.t1 AT2G29440 39.631 217 123 5 2 214 4 216 4.18e-45 150
MS.gene068678.t1 AT2G29470 38.785 214 124 5 5 214 8 218 4.72e-45 150
MS.gene068678.t1 AT1G10360 40.271 221 122 5 2 214 3 221 4.94e-45 150
MS.gene068678.t1 AT2G29450 41.509 212 115 6 3 209 5 212 3.42e-44 147
MS.gene068678.t1 AT1G27130 36.406 217 131 3 2 211 4 220 8.83e-44 147
MS.gene068678.t1 AT1G59670 41.204 216 118 5 3 210 5 219 7.93e-43 144
MS.gene068678.t1 AT2G29460 37.915 211 123 5 3 209 6 212 9.83e-43 144
MS.gene068678.t1 AT1G27140 37.788 217 127 4 2 210 4 220 6.22e-41 140
MS.gene068678.t1 AT1G10370 37.778 225 116 5 2 211 3 218 1.10e-39 136
MS.gene068678.t1 AT1G69920 35.484 217 133 3 2 211 32 248 3.09e-39 135
MS.gene068678.t1 AT1G74590 33.184 223 133 4 4 216 7 223 2.85e-38 132
MS.gene068678.t1 AT5G62480 34.211 228 136 4 1 217 5 229 8.33e-36 126
MS.gene068678.t1 AT5G62480 28.070 228 124 5 1 217 5 203 3.30e-19 82.8
MS.gene068678.t1 AT5G62480 28.070 228 123 5 1 217 5 202 3.45e-19 82.8

Find 35 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGATCACAAGCTTTATTT+TGG 0.128170 2.2:+21547213 MS.gene068678:CDS
GGCTGATTATATTGATAAAA+TGG 0.175083 2.2:+21547235 MS.gene068678:CDS
TTGGGAGAGAAGTCTTATTT+TGG 0.210734 2.2:+21551528 MS.gene068678:CDS
GCAATTAAAGATTCACAAAT+TGG 0.245931 2.2:-21547128 None:intergenic
AAGAATAACTTCATCGTTCA+TGG 0.282607 2.2:-21546934 None:intergenic
TTCAGTATATCGATGAAGTT+TGG 0.335362 2.2:+21547153 MS.gene068678:CDS
TTCAATCTGCATGCATCTCT+TGG 0.363929 2.2:-21551670 None:intergenic
TTTCCATTATGAATGAGAAC+AGG 0.382184 2.2:-21547104 None:intergenic
ATCCCTGTTCTCATTCATAA+TGG 0.385871 2.2:+21547101 MS.gene068678:CDS
TTAAAAGTTTATGAGACCTT+TGG 0.389629 2.2:+21551603 MS.gene068678:CDS
TAGAATAGCACTTGCTGAAA+AGG 0.393176 2.2:+21546992 MS.gene068678:CDS
CAAATTGTTGGAGGATCACT+TGG 0.398963 2.2:+21551509 MS.gene068678:CDS
AGAACAAGAAGTTGCAAAGA+AGG 0.410540 2.2:+21551470 MS.gene068678:CDS
CATAGATACTCTCAAATTGT+TGG 0.415288 2.2:+21551497 MS.gene068678:CDS
TCGTATATCTTATCCTGGTC+TGG 0.433778 2.2:-21551711 None:intergenic
ATTCTAACTCTTATTCCAAA+TGG 0.434839 2.2:-21546975 None:intergenic
AAAGCTTGTGATCTCTGATA+AGG 0.463565 2.2:-21547206 None:intergenic
GTGTCCTAAGTTCATTGCTT+GGG 0.465258 2.2:+21551647 MS.gene068678:CDS
TAAGATATACGAGTTCACTA+TGG 0.471984 2.2:+21551722 MS.gene068678:CDS
ACTCTTATTCCAAATGGACT+TGG 0.492009 2.2:-21546969 None:intergenic
AGTGTCCTAAGTTCATTGCT+TGG 0.499866 2.2:+21551646 MS.gene068678:CDS
AGAATAGCACTTGCTGAAAA+GGG 0.509475 2.2:+21546993 MS.gene068678:CDS
TTCCAAGTCTCTTCCAGACC+AGG 0.513298 2.2:+21551698 MS.gene068678:CDS
TTGGCCCAAGCAATGAACTT+AGG 0.537497 2.2:-21551651 None:intergenic
ATCCTGGTCTGGAAGAGACT+TGG 0.541643 2.2:-21551700 None:intergenic
AGATACTCTCAAATTGTTGG+AGG 0.557191 2.2:+21551500 MS.gene068678:CDS
TTCGAAATTGAGGTTGCCAA+AGG 0.561807 2.2:-21551619 None:intergenic
TGAACTCGTATATCTTATCC+TGG 0.563146 2.2:-21551716 None:intergenic
GATCTCTGATAAGGATCAGA+AGG 0.596783 2.2:-21547197 None:intergenic
TTCCATTATGAATGAGAACA+GGG 0.600232 2.2:-21547103 None:intergenic
TAAGGATCAGAAGGCAACAA+AGG 0.613337 2.2:-21547188 None:intergenic
AGTTCACTATGGACATGAGA+AGG 0.629717 2.2:+21551733 MS.gene068678:CDS
GGGTTCATTTCTAGCAACAA+AGG 0.636391 2.2:-21547065 None:intergenic
TTTGTTGCTAGAAATGAACC+CGG 0.654424 2.2:+21547067 MS.gene068678:CDS
AAATTGTTGGAGGATCACTT+GGG 0.702413 2.2:+21551510 MS.gene068678:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGATTATCATAATAAATTA+AGG - chr2.2:21549687-21549706 None:intergenic 10.0%
!! TGATTATCATAATAAATTAA+GGG - chr2.2:21549686-21549705 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTCTGATT+TGG - chr2.2:21549850-21549869 None:intergenic 10.0%
!! AACATATTAAAAAGACATAT+AGG + chr2.2:21550436-21550455 MS.gene068678:intron 15.0%
!! AATAATAAAATGAGAGAAAT+AGG + chr2.2:21548120-21548139 MS.gene068678:intron 15.0%
!! ACATATTAAAAAGACATATA+GGG + chr2.2:21550437-21550456 MS.gene068678:intron 15.0%
!! AGTTATAATCATATAGAATA+TGG + chr2.2:21548918-21548937 MS.gene068678:intron 15.0%
!! ATTTACTAGTATATCAAAAT+TGG + chr2.2:21547365-21547384 MS.gene068678:intron 15.0%
!! TATGATTATTAAATCAACAA+AGG - chr2.2:21549375-21549394 None:intergenic 15.0%
!!! AGTTTTCTTTTATTGATTAT+TGG + chr2.2:21547296-21547315 MS.gene068678:intron 15.0%
!!! TTTCTCTTATAGTTTTTTTT+AGG - chr2.2:21547570-21547589 None:intergenic 15.0%
!!! TTTTCATTTCTTACTATATA+TGG - chr2.2:21550664-21550683 None:intergenic 15.0%
!! AAGAACATTTATACCAAAAA+AGG + chr2.2:21551444-21551463 MS.gene068678:CDS 20.0%
!! AAGTAAGCATAATTATATCT+TGG - chr2.2:21549188-21549207 None:intergenic 20.0%
!! ACCAAATACAATCATAATAT+GGG + chr2.2:21549882-21549901 MS.gene068678:intron 20.0%
!! ATCATAATAAATTAAGGGTA+TGG - chr2.2:21549681-21549700 None:intergenic 20.0%
!! ATTATTGGAAACAAAACTAT+CGG - chr2.2:21548331-21548350 None:intergenic 20.0%
!! CCATAATGAAAATCATATTA+AGG + chr2.2:21549123-21549142 MS.gene068678:intron 20.0%
!! GAAATAAGTGAAAAAATAGT+CGG + chr2.2:21551365-21551384 MS.gene068678:intron 20.0%
!! TGAGAAAATTATTAGAAACT+TGG - chr2.2:21548407-21548426 None:intergenic 20.0%
!! TGGATTCTCTTTATAATTAT+TGG - chr2.2:21548346-21548365 None:intergenic 20.0%
!! TTATCTCAAACTGAAAATTT+GGG - chr2.2:21548749-21548768 None:intergenic 20.0%
!! TTATGATAATCATCAGATTT+AGG + chr2.2:21549694-21549713 MS.gene068678:intron 20.0%
!! TTCTTAGAATGGAATTAATT+AGG + chr2.2:21550464-21550483 MS.gene068678:intron 20.0%
!! TTTATCTCAAACTGAAAATT+TGG - chr2.2:21548750-21548769 None:intergenic 20.0%
!!! AAGTTATTCTTCTAGATTTT+TGG + chr2.2:21546946-21546965 MS.gene068678:CDS 20.0%
!!! ACTTTTTAGATATACTCAAT+TGG + chr2.2:21551420-21551439 MS.gene068678:intron 20.0%
!!! ATAATTTTTTTCACTTTTCC+TGG - chr2.2:21551278-21551297 None:intergenic 20.0%
!!! ATTTTATTATTCTCTTTGTC+AGG - chr2.2:21548111-21548130 None:intergenic 20.0%
!!! CCTTAATATGATTTTCATTA+TGG - chr2.2:21549126-21549145 None:intergenic 20.0%
!!! CTTAATGTTTTATCACTAAA+AGG + chr2.2:21548026-21548045 MS.gene068678:intron 20.0%
!!! TATGATAACTTTTATTATCC+TGG - chr2.2:21551122-21551141 None:intergenic 20.0%
!!! TCTTTTTAATATGTTGATGA+GGG - chr2.2:21550431-21550450 None:intergenic 20.0%
!!! TTTAGAAGATTAGTCTTATA+GGG - chr2.2:21550699-21550718 None:intergenic 20.0%
!!! TTTATTGATTATTGGAAATG+TGG + chr2.2:21547304-21547323 MS.gene068678:intron 20.0%
!!! TTTTAGAAGATTAGTCTTAT+AGG - chr2.2:21550700-21550719 None:intergenic 20.0%
!!! TTTTTTTTTCTGATTTGGAT+TGG - chr2.2:21549845-21549864 None:intergenic 20.0%
! AAATAGACTTCATATTCCTT+AGG + chr2.2:21550760-21550779 MS.gene068678:intron 25.0%
! AACAGATATGTTAATATACG+AGG - chr2.2:21550499-21550518 None:intergenic 25.0%
! AACATTAGTAGAAAACAGTT+TGG + chr2.2:21549552-21549571 MS.gene068678:intron 25.0%
! AATAGAGGTTATGAGATTAA+GGG - chr2.2:21550305-21550324 None:intergenic 25.0%
! AATTCTAACTGGTTAGTATT+TGG - chr2.2:21548788-21548807 None:intergenic 25.0%
! ACATCTAAATCTTTGTCAAT+AGG + chr2.2:21551072-21551091 MS.gene068678:intron 25.0%
! AGAAAACAGTTTGGATTTAT+AGG + chr2.2:21549561-21549580 MS.gene068678:intron 25.0%
! AGAAGCTTCAATTCATATTA+AGG - chr2.2:21548616-21548635 None:intergenic 25.0%
! ATTAACATAGGTCAAATACA+AGG + chr2.2:21548805-21548824 MS.gene068678:intron 25.0%
! ATTCTAACTCTTATTCCAAA+TGG - chr2.2:21546978-21546997 None:intergenic 25.0%
! ATTCTAACTGGTTAGTATTT+GGG - chr2.2:21548787-21548806 None:intergenic 25.0%
! ATTGTTTGACCATTATGTAA+AGG + chr2.2:21548638-21548657 MS.gene068678:intron 25.0%
! CACCAAATACAATCATAATA+TGG + chr2.2:21549881-21549900 MS.gene068678:intron 25.0%
! CATATTATGATTGTATTTGG+TGG - chr2.2:21549883-21549902 None:intergenic 25.0%
! GAAAACAGTTTGGATTTATA+GGG + chr2.2:21549562-21549581 MS.gene068678:intron 25.0%
! GCAATTAAAGATTCACAAAT+TGG - chr2.2:21547131-21547150 None:intergenic 25.0%
! GGAGAGATATAAATCATAAT+AGG + chr2.2:21548493-21548512 MS.gene068678:intron 25.0%
! GGCTGATTATATTGATAAAA+TGG + chr2.2:21547235-21547254 MS.gene068678:CDS 25.0%
! GTATATCAAAATTGGATATG+TGG + chr2.2:21547373-21547392 MS.gene068678:intron 25.0%
! TAACCAGTTAGAATTAACAT+AGG + chr2.2:21548793-21548812 MS.gene068678:intron 25.0%
! TAATGAGTTTGATAGAAATG+TGG + chr2.2:21547612-21547631 MS.gene068678:intron 25.0%
! TAGATTGTGTTAGTTAAATC+TGG - chr2.2:21550099-21550118 None:intergenic 25.0%
! TATAGGGATATTTCTTAGAA+TGG + chr2.2:21550453-21550472 MS.gene068678:intron 25.0%
! TATCTCAAACTGAAAATTTG+GGG - chr2.2:21548748-21548767 None:intergenic 25.0%
! TCCCATATTATGATTGTATT+TGG - chr2.2:21549886-21549905 None:intergenic 25.0%
! TTAAAAAATGCTAGGAAGTT+AGG - chr2.2:21550890-21550909 None:intergenic 25.0%
! TTAAAAGTTTATGAGACCTT+TGG + chr2.2:21551603-21551622 MS.gene068678:CDS 25.0%
! TTAATCTCATAACCTCTATT+CGG + chr2.2:21550305-21550324 MS.gene068678:intron 25.0%
! TTTATTCCTCTTCTTTCTTT+GGG + chr2.2:21547984-21548003 MS.gene068678:intron 25.0%
!! AACTTAAAAGTCTGAGTTTT+AGG + chr2.2:21551029-21551048 MS.gene068678:intron 25.0%
!! ACTTAAAAGTCTGAGTTTTA+GGG + chr2.2:21551030-21551049 MS.gene068678:intron 25.0%
!! AGGAATATGAAGTCTATTTT+AGG - chr2.2:21550759-21550778 None:intergenic 25.0%
!! AGGTCTCATAAACTTTTAAT+CGG - chr2.2:21551602-21551621 None:intergenic 25.0%
!! ATATTTGTTAGTAATATGCC+AGG + chr2.2:21551257-21551276 MS.gene068678:intron 25.0%
!! CAAGGATTTTATTAAATTGC+AGG + chr2.2:21548823-21548842 MS.gene068678:intron 25.0%
!! GATTTTATTAAATTGCAGGT+GGG + chr2.2:21548827-21548846 MS.gene068678:intron 25.0%
!! GTCTTTTTAATATGTTGATG+AGG - chr2.2:21550432-21550451 None:intergenic 25.0%
!! TATTTCTAAACTAATGCTCA+AGG - chr2.2:21551351-21551370 None:intergenic 25.0%
!! TTCTTCCTTTAAAAAATGCT+AGG - chr2.2:21550898-21550917 None:intergenic 25.0%
!! TTGTCAATAGGAAAACTTTT+AGG + chr2.2:21551084-21551103 MS.gene068678:intron 25.0%
!! TTGTGACACTCTTTTTATTA+GGG - chr2.2:21550802-21550821 None:intergenic 25.0%
!! TTTTATTCCTCTTCTTTCTT+TGG + chr2.2:21547983-21548002 MS.gene068678:intron 25.0%
!!! AACTTCCTAGCATTTTTTAA+AGG + chr2.2:21550890-21550909 MS.gene068678:intron 25.0%
!!! AGTTCAACTAAATGTCATTT+TGG - chr2.2:21548207-21548226 None:intergenic 25.0%
!!! ATAATACTTTGTTTTCCATG+TGG - chr2.2:21549769-21549788 None:intergenic 25.0%
!!! GTTAGCTTTGAAAGATATTT+GGG - chr2.2:21548594-21548613 None:intergenic 25.0%
AAATACTTGGGTATACCTAT+TGG - chr2.2:21550600-21550619 None:intergenic 30.0%
AAGCATTATCCTACTAAGTA+CGG - chr2.2:21547681-21547700 None:intergenic 30.0%
AATCAACAAAGGTTCATTCA+TGG - chr2.2:21549364-21549383 None:intergenic 30.0%
AATTACATGCATACCTTCTA+AGG + chr2.2:21550567-21550586 MS.gene068678:intron 30.0%
AATTCAGACTAAAGAAGTGA+TGG - chr2.2:21548249-21548268 None:intergenic 30.0%
AATTTGGATTCTCAATAGTC+AGG + chr2.2:21547733-21547752 MS.gene068678:intron 30.0%
ACCTATAATTGAAAAGATGG+TGG + chr2.2:21547453-21547472 MS.gene068678:intron 30.0%
ACTATTAATCACAACAATCC+TGG - chr2.2:21549595-21549614 None:intergenic 30.0%
ACTGAAAATGCATATCTGAT+AGG - chr2.2:21547931-21547950 None:intergenic 30.0%
AGATTAACTTCATATCTTGC+AGG - chr2.2:21551172-21551191 None:intergenic 30.0%
AGCACCTATAATTGAAAAGA+TGG + chr2.2:21547450-21547469 MS.gene068678:intron 30.0%
AGTGAAAAAATAGTCGGTAT+TGG + chr2.2:21551371-21551390 MS.gene068678:intron 30.0%
AGTTAGTTACACACCAAAAT+AGG + chr2.2:21550152-21550171 MS.gene068678:intron 30.0%
AGTTTGGGCATATAAATTTG+TGG + chr2.2:21547491-21547510 MS.gene068678:intron 30.0%
ATACACTGATAATAGTTCCT+TGG + chr2.2:21549989-21550008 MS.gene068678:intron 30.0%
ATCAACAAAGGTTCATTCAT+GGG - chr2.2:21549363-21549382 None:intergenic 30.0%
ATTATAAAGAGAATCCATGC+AGG + chr2.2:21548349-21548368 MS.gene068678:intron 30.0%
ATTTGGATTCTCAATAGTCA+GGG + chr2.2:21547734-21547753 MS.gene068678:intron 30.0%
CATAGATACTCTCAAATTGT+TGG + chr2.2:21551497-21551516 MS.gene068678:CDS 30.0%
CCTATAATTGAAAAGATGGT+GGG + chr2.2:21547454-21547473 MS.gene068678:intron 30.0%
CTATAAAAATCAGACCAAAG+AGG - chr2.2:21548456-21548475 None:intergenic 30.0%
CTGAAAATGCATATCTGATA+GGG - chr2.2:21547930-21547949 None:intergenic 30.0%
GAATAGAGGTTATGAGATTA+AGG - chr2.2:21550306-21550325 None:intergenic 30.0%
GAATTAAGCTTAGGTAGTTT+GGG + chr2.2:21547476-21547495 MS.gene068678:intron 30.0%
GTAGTATTGCTAGTTAGAAT+AGG + chr2.2:21549409-21549428 MS.gene068678:intron 30.0%
GTATACCCAAGTATTTGAAT+GGG + chr2.2:21550604-21550623 MS.gene068678:intron 30.0%
GTTAAATCTGGTCCTATAAA+AGG - chr2.2:21550087-21550106 None:intergenic 30.0%
TAACAAACCATATCACTCAA+GGG + chr2.2:21550337-21550356 MS.gene068678:intron 30.0%
TAAGATATACGAGTTCACTA+TGG + chr2.2:21551722-21551741 MS.gene068678:CDS 30.0%
TACACTGATAATAGTTCCTT+GGG + chr2.2:21549990-21550009 MS.gene068678:intron 30.0%
TAGAACATTATGACGTAGTT+TGG + chr2.2:21547642-21547661 MS.gene068678:intron 30.0%
TAGGATTTAGGAATGTTTAC+AGG - chr2.2:21550871-21550890 None:intergenic 30.0%
TATTGCTAGTTAGAATAGGT+TGG + chr2.2:21549413-21549432 MS.gene068678:intron 30.0%
TATTGGTGAAAATCCTTAGA+AGG - chr2.2:21550583-21550602 None:intergenic 30.0%
TCAAAATTGGATATGTGGTA+AGG + chr2.2:21547378-21547397 MS.gene068678:intron 30.0%
TGAAAATGCATATCTGATAG+GGG - chr2.2:21547929-21547948 None:intergenic 30.0%
TGACCTATGTTAATTCTAAC+TGG - chr2.2:21548799-21548818 None:intergenic 30.0%
TGGTTGAAATCTATCAGATA+TGG - chr2.2:21549661-21549680 None:intergenic 30.0%
TTAACAAACCATATCACTCA+AGG + chr2.2:21550336-21550355 MS.gene068678:intron 30.0%
TTATGTCCTAATAAACCACA+TGG + chr2.2:21549751-21549770 MS.gene068678:intron 30.0%
TTCAGTATATCGATGAAGTT+TGG + chr2.2:21547153-21547172 MS.gene068678:CDS 30.0%
TTCCATTATGAATGAGAACA+GGG - chr2.2:21547106-21547125 None:intergenic 30.0%
TTCTAACTGGTTAGTATTTG+GGG - chr2.2:21548786-21548805 None:intergenic 30.0%
TTCTCAACATATCATGAAGA+AGG - chr2.2:21548077-21548096 None:intergenic 30.0%
TTTCCATTATGAATGAGAAC+AGG - chr2.2:21547107-21547126 None:intergenic 30.0%
! ATAGTTCTGTCATGAACAAA+GGG + chr2.2:21548472-21548491 MS.gene068678:intron 30.0%
! ATTTGCTAAGCTAAATATGC+AGG - chr2.2:21549526-21549545 None:intergenic 30.0%
! CACTAACAGTTTCCTTTTAT+AGG + chr2.2:21550072-21550091 MS.gene068678:intron 30.0%
! CTTGTGACACTCTTTTTATT+AGG - chr2.2:21550803-21550822 None:intergenic 30.0%
! CTTTTGCTTTCAAAGTATGT+AGG + chr2.2:21549442-21549461 MS.gene068678:intron 30.0%
! GATATGCATTTTCAGTGATT+TGG + chr2.2:21547935-21547954 MS.gene068678:intron 30.0%
! GGATTTTATTAAATTGCAGG+TGG + chr2.2:21548826-21548845 MS.gene068678:intron 30.0%
! TATAGTTCTGTCATGAACAA+AGG + chr2.2:21548471-21548490 MS.gene068678:intron 30.0%
! TCATTTTACCAAGCATTTCT+TGG - chr2.2:21548527-21548546 None:intergenic 30.0%
! TGTTTTCCATGTGGTTTATT+AGG - chr2.2:21549760-21549779 None:intergenic 30.0%
! TTAATATGTTGATGAGGGTT+TGG - chr2.2:21550426-21550445 None:intergenic 30.0%
! TTAGAAGGTATGCATGTAAT+TGG - chr2.2:21550568-21550587 None:intergenic 30.0%
! TTAGGAATGTTTACAGGTTT+TGG - chr2.2:21550865-21550884 None:intergenic 30.0%
! TTTTCTCTTGAGTAAGGTTT+TGG - chr2.2:21550219-21550238 None:intergenic 30.0%
!! GGTTAGCTTTGAAAGATATT+TGG - chr2.2:21548595-21548614 None:intergenic 30.0%
!! TATTTTGGAGGAGACAAATT+TGG + chr2.2:21551543-21551562 MS.gene068678:CDS 30.0%
!! TTCCTTTGGTTTGAATCAAA+GGG - chr2.2:21550376-21550395 None:intergenic 30.0%
!! TTCTAAGGATTTTCACCAAT+AGG + chr2.2:21550582-21550601 MS.gene068678:intron 30.0%
!! TTTTAGGTGCTTCAAGTAAT+TGG - chr2.2:21550743-21550762 None:intergenic 30.0%
!!! ACTGCCTAATTTTGATTGAA+TGG + chr2.2:21547846-21547865 MS.gene068678:intron 30.0%
!!! AGAGATCACAAGCTTTATTT+TGG + chr2.2:21547213-21547232 MS.gene068678:CDS 30.0%
!!! GAGATCACAAGCTTTATTTT+GGG + chr2.2:21547214-21547233 MS.gene068678:CDS 30.0%
!!! GATCTTTTTTTACCTTTCTC+CGG + chr2.2:21548849-21548868 MS.gene068678:intron 30.0%
!!! TTCTTGTTCTTCTCCTTTTT+TGG - chr2.2:21551460-21551479 None:intergenic 30.0%
AAAGCTTGTGATCTCTGATA+AGG - chr2.2:21547209-21547228 None:intergenic 35.0%
AAATTGTTGGAGGATCACTT+GGG + chr2.2:21551510-21551529 MS.gene068678:CDS 35.0%
AACTTCTGCCTTTAGGTAAT+TGG + chr2.2:21548549-21548568 MS.gene068678:intron 35.0%
AAGGATAGTAGATCAAATGG+AGG + chr2.2:21547515-21547534 MS.gene068678:intron 35.0%
AATGAGAAACTTCTGCCTTT+AGG + chr2.2:21548542-21548561 MS.gene068678:intron 35.0%
ACTGTTAACACTGACATTAG+AGG - chr2.2:21548956-21548975 None:intergenic 35.0%
AGAACAAGAAGTTGCAAAGA+AGG + chr2.2:21551470-21551489 MS.gene068678:CDS 35.0%
AGAATCCAAATTCCTGATTG+GGG - chr2.2:21547725-21547744 None:intergenic 35.0%
AGAATGCTCATTGAGTAACT+TGG - chr2.2:21548677-21548696 None:intergenic 35.0%
AGATACTCTCAAATTGTTGG+AGG + chr2.2:21551500-21551519 MS.gene068678:CDS 35.0%
AGGATAGTAGATCAAATGGA+GGG + chr2.2:21547516-21547535 MS.gene068678:intron 35.0%
ATATCCCTTGTACTGTTAGA+AGG - chr2.2:21548306-21548325 None:intergenic 35.0%
ATCCCTGTTCTCATTCATAA+TGG + chr2.2:21547101-21547120 MS.gene068678:CDS 35.0%
ATCTTAGATATACTGCACAC+AGG - chr2.2:21548181-21548200 None:intergenic 35.0%
ATGCATTACCATGTCAGTAT+TGG + chr2.2:21549209-21549228 MS.gene068678:intron 35.0%
ATGCTAGGAAGTTAGGATTT+AGG - chr2.2:21550883-21550902 None:intergenic 35.0%
CAAAAAAGCAAAAACCTGCA+TGG - chr2.2:21548366-21548385 None:intergenic 35.0%
CAACAAATACGACCTTACTA+TGG - chr2.2:21549938-21549957 None:intergenic 35.0%
CAATCCTTCTAACAGTACAA+GGG + chr2.2:21548299-21548318 MS.gene068678:intron 35.0%
CAGATTTAGGCACATGTTTA+GGG + chr2.2:21549707-21549726 MS.gene068678:intron 35.0%
CATAGTAAGGTCGTATTTGT+TGG + chr2.2:21549936-21549955 MS.gene068678:intron 35.0%
CATATCATGAAGAAGGCTAA+TGG - chr2.2:21548070-21548089 None:intergenic 35.0%
CATGGGTATGTTCAAAAATC+AGG - chr2.2:21549346-21549365 None:intergenic 35.0%
CTGTTAGAAGGATTGAAGAA+CGG - chr2.2:21548294-21548313 None:intergenic 35.0%
GAAAATGCATATCTGATAGG+GGG - chr2.2:21547928-21547947 None:intergenic 35.0%
GAATGCTCATTGAGTAACTT+GGG - chr2.2:21548676-21548695 None:intergenic 35.0%
GAGAATCCAAATTCCTGATT+GGG - chr2.2:21547726-21547745 None:intergenic 35.0%
GAGTAGTTAAGCTACAAAGA+AGG - chr2.2:21550399-21550418 None:intergenic 35.0%
GATTTATAGGGACAATTTCC+AGG + chr2.2:21549574-21549593 MS.gene068678:intron 35.0%
GGAATTAAGCTTAGGTAGTT+TGG + chr2.2:21547475-21547494 MS.gene068678:intron 35.0%
GGGCATATAAATTTGTGGTA+AGG + chr2.2:21547496-21547515 MS.gene068678:intron 35.0%
GGTAAGGATAGTAGATCAAA+TGG + chr2.2:21547512-21547531 MS.gene068678:intron 35.0%
GGTATACCCAAGTATTTGAA+TGG + chr2.2:21550603-21550622 MS.gene068678:intron 35.0%
GTAATTGGTATCAAGCTTGA+AGG - chr2.2:21550728-21550747 None:intergenic 35.0%
GTACTTAGTAGGATAATGCT+TGG + chr2.2:21547680-21547699 MS.gene068678:intron 35.0%
GTGGCCATTCAATCAAAATT+AGG - chr2.2:21547853-21547872 None:intergenic 35.0%
GTTATGAGATTAAGGGTCTT+GGG - chr2.2:21550298-21550317 None:intergenic 35.0%
TATACGAACCAATACTGACA+TGG - chr2.2:21549220-21549239 None:intergenic 35.0%
TCAATCCTTCTAACAGTACA+AGG + chr2.2:21548298-21548317 MS.gene068678:intron 35.0%
TCAGATTTAGGCACATGTTT+AGG + chr2.2:21549706-21549725 MS.gene068678:intron 35.0%
TCAGTCCCATTCAAATACTT+GGG - chr2.2:21550612-21550631 None:intergenic 35.0%
TCTAAACTAATGCTCAAGGT+TGG - chr2.2:21551347-21551366 None:intergenic 35.0%
TGAACTCGTATATCTTATCC+TGG - chr2.2:21551719-21551738 None:intergenic 35.0%
TGAGAATCCAAATTCCTGAT+TGG - chr2.2:21547727-21547746 None:intergenic 35.0%
TGGTTAATCATAGCCTGTTA+GGG - chr2.2:21550274-21550293 None:intergenic 35.0%
TGTATATAACCAACCAACAC+AGG - chr2.2:21549270-21549289 None:intergenic 35.0%
TGTTGGAGACCTTTACATAA+TGG - chr2.2:21548650-21548669 None:intergenic 35.0%
TTCAGTCCCATTCAAATACT+TGG - chr2.2:21550613-21550632 None:intergenic 35.0%
TTGGATCACCAATTACCTAA+AGG - chr2.2:21548560-21548579 None:intergenic 35.0%
TTGGTTAATCATAGCCTGTT+AGG - chr2.2:21550275-21550294 None:intergenic 35.0%
TTTGGATTCTCAATAGTCAG+GGG + chr2.2:21547735-21547754 MS.gene068678:intron 35.0%
TTTGTTGCTAGAAATGAACC+CGG + chr2.2:21547067-21547086 MS.gene068678:CDS 35.0%
! AACAGCTTACTTGCCTATTT+TGG - chr2.2:21550168-21550187 None:intergenic 35.0%
! ACATGTCTCTAGAAAGGTTT+GGG - chr2.2:21549792-21549811 None:intergenic 35.0%
! ACTCTTATTCCAAATGGACT+TGG - chr2.2:21546972-21546991 None:intergenic 35.0%
! ACTTTTAATCGGCTGTAGAA+TGG - chr2.2:21551591-21551610 None:intergenic 35.0%
! AGAATAGCACTTGCTGAAAA+GGG + chr2.2:21546993-21547012 MS.gene068678:CDS 35.0%
! AGTAGCTTTTCTCTTGAGTA+AGG - chr2.2:21550225-21550244 None:intergenic 35.0%
! ATGGACATGAGAAGGATTTT+AGG + chr2.2:21551741-21551760 MS.gene068678:CDS 35.0%
! CCCACCATCTTTTCAATTAT+AGG - chr2.2:21547457-21547476 None:intergenic 35.0%
! CTTTTAATCGGCTGTAGAAT+GGG - chr2.2:21551590-21551609 None:intergenic 35.0%
! GACACTCATTTTCGAAATTG+AGG - chr2.2:21551632-21551651 None:intergenic 35.0%
! GTAATTGGTGATCCAATCAT+GGG + chr2.2:21548564-21548583 MS.gene068678:intron 35.0%
! TAATTGGTGATCCAATCATG+GGG + chr2.2:21548565-21548584 MS.gene068678:intron 35.0%
! TAGAATAGCACTTGCTGAAA+AGG + chr2.2:21546992-21547011 MS.gene068678:CDS 35.0%
! TGACACTCTTTTTATTAGGG+AGG - chr2.2:21550799-21550818 None:intergenic 35.0%
! TGATATGTTGAGAAGTGTGA+TGG + chr2.2:21548083-21548102 MS.gene068678:intron 35.0%
!! AAACTTTTAGGTCTTCTTGG+TGG + chr2.2:21551096-21551115 MS.gene068678:intron 35.0%
!! AATGTTTACAGGTTTTGGTG+AGG - chr2.2:21550860-21550879 None:intergenic 35.0%
!! ATGTTTACAGGTTTTGGTGA+GGG - chr2.2:21550859-21550878 None:intergenic 35.0%
!! ATTTGGATTGGTAGTACTCT+TGG - chr2.2:21549833-21549852 None:intergenic 35.0%
!! GGAAAACTTTTAGGTCTTCT+TGG + chr2.2:21551093-21551112 MS.gene068678:intron 35.0%
!! GTTCCTTTGGTTTGAATCAA+AGG - chr2.2:21550377-21550396 None:intergenic 35.0%
!! TCCTTTGGTTTGAATCAAAG+GGG - chr2.2:21550375-21550394 None:intergenic 35.0%
!! TTAACTTGTAAGCCGAATAG+AGG - chr2.2:21550320-21550339 None:intergenic 35.0%
!! TTGAGTAACTTGGGTTTTGT+TGG - chr2.2:21548667-21548686 None:intergenic 35.0%
!!! TAAAAGTCTGAGTTTTAGGG+TGG + chr2.2:21551033-21551052 MS.gene068678:intron 35.0%
!!! TTGGGAGAGAAGTCTTATTT+TGG + chr2.2:21551528-21551547 MS.gene068678:CDS 35.0%
ACAAGATCCCTTGAGTGATA+TGG - chr2.2:21550347-21550366 None:intergenic 40.0%
ACACCGTTAGAGATAGAGTT+GGG + chr2.2:21547425-21547444 MS.gene068678:intron 40.0%
ACTAGCAATACTACAGCAGT+TGG - chr2.2:21549403-21549422 None:intergenic 40.0%
ACTCTGAATTTGTGAGTCAC+TGG - chr2.2:21548888-21548907 None:intergenic 40.0%
AGCTACAAAGAAGGTTCCTT+TGG - chr2.2:21550390-21550409 None:intergenic 40.0%
AGTGTCCTAAGTTCATTGCT+TGG + chr2.2:21551646-21551665 MS.gene068678:CDS 40.0%
AGTTCACTATGGACATGAGA+AGG + chr2.2:21551733-21551752 MS.gene068678:CDS 40.0%
ATAGCCTGTTAGGGAAATGT+AGG - chr2.2:21550265-21550284 None:intergenic 40.0%
ATGGAAGGTAAGCATAGTGT+CGG - chr2.2:21549004-21549023 None:intergenic 40.0%
ATTGTCCCCAATCAGGAATT+TGG + chr2.2:21547717-21547736 MS.gene068678:intron 40.0%
ATTTATGGTCATCCGGAGAA+AGG - chr2.2:21548864-21548883 None:intergenic 40.0%
CAAAACTGCTCAAACCTCTT+TGG + chr2.2:21548439-21548458 MS.gene068678:intron 40.0%
CAAATACGACCTTACTATGG+TGG - chr2.2:21549935-21549954 None:intergenic 40.0%
CAAATTGTTGGAGGATCACT+TGG + chr2.2:21551509-21551528 MS.gene068678:CDS 40.0%
CATATGCTCCAAGAAATGCT+TGG + chr2.2:21548516-21548535 MS.gene068678:intron 40.0%
GAACAGTGTTAGCATCATAG+AGG + chr2.2:21548719-21548738 MS.gene068678:intron 40.0%
GATACTCCCAAAGAAAGAAG+AGG - chr2.2:21547993-21548012 None:intergenic 40.0%
GATCTCTGATAAGGATCAGA+AGG - chr2.2:21547200-21547219 None:intergenic 40.0%
GGTTATGAGATTAAGGGTCT+TGG - chr2.2:21550299-21550318 None:intergenic 40.0%
GTGTCCTAAGTTCATTGCTT+GGG + chr2.2:21551647-21551666 MS.gene068678:CDS 40.0%
GTTGCTGTAAGACTGTTTAG+TGG - chr2.2:21549041-21549060 None:intergenic 40.0%
TAAGGATCAGAAGGCAACAA+AGG - chr2.2:21547191-21547210 None:intergenic 40.0%
TACCCCAACTCTATCTCTAA+CGG - chr2.2:21547431-21547450 None:intergenic 40.0%
TATTTGGGAATCCCCATGAT+TGG - chr2.2:21548579-21548598 None:intergenic 40.0%
TCGTATATCTTATCCTGGTC+TGG - chr2.2:21551714-21551733 None:intergenic 40.0%
TGTACATATTGTCCCCAATC+AGG + chr2.2:21547710-21547729 MS.gene068678:intron 40.0%
TTACAGCAACTGAACAGTCT+AGG + chr2.2:21549051-21549070 MS.gene068678:intron 40.0%
TTCAATCTGCATGCATCTCT+TGG - chr2.2:21551673-21551692 None:intergenic 40.0%
TTCGAAATTGAGGTTGCCAA+AGG - chr2.2:21551622-21551641 None:intergenic 40.0%
TTGTGAGTCACTGGCATTTA+TGG - chr2.2:21548879-21548898 None:intergenic 40.0%
TTGTTCCAACTTAGCAGCAT+TGG - chr2.2:21549080-21549099 None:intergenic 40.0%
! ACAGGGATTTTCTTCTGAAC+CGG - chr2.2:21547089-21547108 None:intergenic 40.0%
! AGTAAGGTCGTATTTGTTGG+AGG + chr2.2:21549939-21549958 MS.gene068678:intron 40.0%
! CAAAGAGGTTTGAGCAGTTT+TGG - chr2.2:21548441-21548460 None:intergenic 40.0%
! GACATGTCTCTAGAAAGGTT+TGG - chr2.2:21549793-21549812 None:intergenic 40.0%
! GGTAATTGGTGATCCAATCA+TGG + chr2.2:21548563-21548582 MS.gene068678:intron 40.0%
! TCTTCTTTTGCTTCCTGTGT+TGG + chr2.2:21549254-21549273 MS.gene068678:intron 40.0%
! TTTTATTAGGGAGGCAACAG+TGG - chr2.2:21550790-21550809 None:intergenic 40.0%
!! AGATGGTGGGAATTAAGCTT+AGG + chr2.2:21547467-21547486 MS.gene068678:intron 40.0%
!! CCTTTGGTTTGAATCAAAGG+GGG - chr2.2:21550374-21550393 None:intergenic 40.0%
!! CTTTGGTTTGAATCAAAGGG+GGG - chr2.2:21550373-21550392 None:intergenic 40.0%
!! GGGTTCATTTCTAGCAACAA+AGG - chr2.2:21547068-21547087 None:intergenic 40.0%
!! TCTCTTGAGTAAGGTTTTGG+TGG - chr2.2:21550216-21550235 None:intergenic 40.0%
!! TCTTTCTTTGGGAGTATCTC+TGG + chr2.2:21547995-21548014 MS.gene068678:intron 40.0%
!!! GATTTTTGGCCAAGTCCATT+TGG + chr2.2:21546960-21546979 MS.gene068678:CDS 40.0%
!!! GGAGAGAAGTCTTATTTTGG+AGG + chr2.2:21551531-21551550 MS.gene068678:CDS 40.0%
AACCCACATTCACGCATTTG+GGG + chr2.2:21547758-21547777 MS.gene068678:intron 45.0%
AAGATCTGAGTCGACAAACC+GGG + chr2.2:21550524-21550543 MS.gene068678:intron 45.0%
ACTGCCTACATTTCCCTAAC+AGG + chr2.2:21550258-21550277 MS.gene068678:intron 45.0%
AGAAGGATTGAAGAACGGCT+TGG - chr2.2:21548289-21548308 None:intergenic 45.0%
AGTCAAATCACGAGAAGCAG+AGG + chr2.2:21547540-21547559 MS.gene068678:intron 45.0%
ATGTTCCGCTTGTGTGAATG+CGG + chr2.2:21547875-21547894 MS.gene068678:intron 45.0%
CAAGATCTGAGTCGACAAAC+CGG + chr2.2:21550523-21550542 MS.gene068678:intron 45.0%
CACCGTTAGAGATAGAGTTG+GGG + chr2.2:21547426-21547445 MS.gene068678:intron 45.0%
CACTGGCATTTATGGTCATC+CGG - chr2.2:21548871-21548890 None:intergenic 45.0%
CAGCTGTTAATAGACTCTCC+CGG - chr2.2:21550545-21550564 None:intergenic 45.0%
CATCAATTCACTCTCTCCCA+AGG - chr2.2:21550009-21550028 None:intergenic 45.0%
CATTCACACAAGCGGAACAT+TGG - chr2.2:21547875-21547894 None:intergenic 45.0%
CCCCCTTTGATTCAAACCAA+AGG + chr2.2:21550371-21550390 MS.gene068678:intron 45.0%
CTGTAGCAGTGGAACAACAA+AGG - chr2.2:21549473-21549492 None:intergenic 45.0%
GAACCCACATTCACGCATTT+GGG + chr2.2:21547757-21547776 MS.gene068678:intron 45.0%
GACACCGTTAGAGATAGAGT+TGG + chr2.2:21547424-21547443 MS.gene068678:intron 45.0%
GTAGTACTCTTGGCTCAAAC+TGG - chr2.2:21549823-21549842 None:intergenic 45.0%
TACCCCAAATGCGTGAATGT+GGG - chr2.2:21547763-21547782 None:intergenic 45.0%
TCGGGTTAACCACCATAGTA+AGG + chr2.2:21549923-21549942 MS.gene068678:intron 45.0%
TGAGATTAAGGGTCTTGGGT+TGG - chr2.2:21550294-21550313 None:intergenic 45.0%
TGTAGCTGACCGTACTTAGT+AGG + chr2.2:21547669-21547688 MS.gene068678:intron 45.0%
TGTTAGGGAAATGTAGGCAG+TGG - chr2.2:21550259-21550278 None:intergenic 45.0%
TTACCCCAAATGCGTGAATG+TGG - chr2.2:21547764-21547783 None:intergenic 45.0%
TTGGCCCAAGCAATGAACTT+AGG - chr2.2:21551654-21551673 None:intergenic 45.0%
! CAGGGATTTTCTTCTGAACC+GGG - chr2.2:21547088-21547107 None:intergenic 45.0%
! CTCGAGACATGTCTCTAGAA+AGG - chr2.2:21549798-21549817 None:intergenic 45.0%
! TGTAGGCAGTGGCTTTTAAG+TGG - chr2.2:21550248-21550267 None:intergenic 45.0%
!! CTTTGTTGTTCCACTGCTAC+AGG + chr2.2:21549471-21549490 MS.gene068678:intron 45.0%
!! CTTTTGCTTCCTGTGTTGGT+TGG + chr2.2:21549258-21549277 MS.gene068678:intron 45.0%
!! GAGAAACTTGCTGCTGCAAA+TGG - chr2.2:21547961-21547980 None:intergenic 45.0%
AGGCAACAGTGGAGAACCTA+AGG - chr2.2:21550779-21550798 None:intergenic 50.0%
AGTGGCTGTGAGTTGTGCAA+TGG - chr2.2:21549023-21549042 None:intergenic 50.0%
ATCAGCATCTACGACTGCGA+AGG + chr2.2:21549294-21549313 MS.gene068678:intron 50.0%
ATCCTGGTCTGGAAGAGACT+TGG - chr2.2:21551703-21551722 None:intergenic 50.0%
ATGGTGGTTAACCCGAGTCA+AGG - chr2.2:21549919-21549938 None:intergenic 50.0%
ATTGCCCGCATTCACACAAG+CGG - chr2.2:21547883-21547902 None:intergenic 50.0%
GCTGTGAGTTGTGCAATGGA+AGG - chr2.2:21549019-21549038 None:intergenic 50.0%
GGAACCCACATTCACGCATT+TGG + chr2.2:21547756-21547775 MS.gene068678:intron 50.0%
GGTCAACAACGACCAAACAG+TGG - chr2.2:21549325-21549344 None:intergenic 50.0%
GGTTGCCAATGCTGCTAAGT+TGG + chr2.2:21549072-21549091 MS.gene068678:intron 50.0%
TCACACAAGCGGAACATTGG+TGG - chr2.2:21547872-21547891 None:intergenic 50.0%
TGCAGAAAAGCCTGTAGCAG+TGG - chr2.2:21549484-21549503 None:intergenic 50.0%
TGGTGGTTAACCCGAGTCAA+GGG - chr2.2:21549918-21549937 None:intergenic 50.0%
TGTTCCGCTTGTGTGAATGC+GGG + chr2.2:21547876-21547895 MS.gene068678:intron 50.0%
TTCCAAGTCTCTTCCAGACC+AGG + chr2.2:21551698-21551717 MS.gene068678:CDS 50.0%
TTCGCAGTCGTAGATGCTGA+TGG - chr2.2:21549295-21549314 None:intergenic 50.0%
! GAAGGTAAGCATAGTGTCGG+TGG - chr2.2:21549001-21549020 None:intergenic 50.0%
! TTTAGGTCTTCTTGGTGGCC+AGG + chr2.2:21551101-21551120 MS.gene068678:intron 50.0%
!! CGGTTTGTCGACTCAGATCT+TGG - chr2.2:21550525-21550544 None:intergenic 50.0%
ACCCTCAACACCCTTGACTC+GGG + chr2.2:21549905-21549924 MS.gene068678:intron 55.0%
GACCCTCAACACCCTTGACT+CGG + chr2.2:21549904-21549923 MS.gene068678:intron 55.0%
GCGAAGGACTGTCCACTGTT+TGG + chr2.2:21549310-21549329 MS.gene068678:intron 55.0%
! AATGTTGACTGCAGGGGAGC+TGG + chr2.2:21547900-21547919 MS.gene068678:intron 55.0%
! ATGCGGGCAATGTTGACTGC+AGG + chr2.2:21547892-21547911 MS.gene068678:intron 55.0%
! TGCGGGCAATGTTGACTGCA+GGG + chr2.2:21547893-21547912 MS.gene068678:intron 55.0%
!! AACCCGAGTCAAGGGTGTTG+AGG - chr2.2:21549910-21549929 None:intergenic 55.0%
!! ACCCGAGTCAAGGGTGTTGA+GGG - chr2.2:21549909-21549928 None:intergenic 55.0%
! GCGGGCAATGTTGACTGCAG+GGG + chr2.2:21547894-21547913 MS.gene068678:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 21546936 21551773 21546936 ID=MS.gene068678
chr2.2 mRNA 21546936 21551773 21546936 ID=MS.gene068678.t1;Parent=MS.gene068678
chr2.2 exon 21546936 21547256 21546936 ID=MS.gene068678.t1.exon1;Parent=MS.gene068678.t1
chr2.2 CDS 21546936 21547256 21546936 ID=cds.MS.gene068678.t1;Parent=MS.gene068678.t1
chr2.2 exon 21551429 21551773 21551429 ID=MS.gene068678.t1.exon2;Parent=MS.gene068678.t1
chr2.2 CDS 21551429 21551773 21551429 ID=cds.MS.gene068678.t1;Parent=MS.gene068678.t1
Gene Sequence

>MS.gene068678

ATGAACGATGAAGTTATTCTTCTAGATTTTTGGCCAAGTCCATTTGGAATAAGAGTTAGAATAGCACTTGCTGAAAAGGGTATCAAGTATAAATACATTGAAGAAGAATTGATGTCATTGAAAAAGAGTCCTTTGTTGCTAGAAATGAACCCGGTTCAGAAGAAAATCCCTGTTCTCATTCATAATGGAAAACCAATTTGTGAATCTTTAATTGCTGTTCAGTATATCGATGAAGTTTGGAATGAGAAATCTCCTTTGTTGCCTTCTGATCCTTATCAGAGATCACAAGCTTTATTTTGGGCTGATTATATTGATAAAATGGTAATTTGCATTTGATTGTTTCTAGAATTTCTTCATCATAGTTTTCTTTTATTGATTATTGGAAATGTGGAGTAATTAGTTACTTTCTTCAAGCATGTTAGACAAACAATTTACTAGTATATCAAAATTGGATATGTGGTAAGGCTAGACGATATAAGATTAGAAATGACACCGTTAGAGATAGAGTTGGGGTAGCACCTATAATTGAAAAGATGGTGGGAATTAAGCTTAGGTAGTTTGGGCATATAAATTTGTGGTAAGGATAGTAGATCAAATGGAGGGTAGTCAAATCACGAGAAGCAGAGGAAGACCTAAAAAAAACTATAAGAGAAATTATTAAGAAAGATTTAGAGATTAATGAGTTTGATAGAAATGTGGTATAATATAGAACATTATGACGTAGTTTGGTCTATGTAGCTGACCGTACTTAGTAGGATAATGCTTGGTTGTTGTTGTACATATTGTCCCCAATCAGGAATTTGGATTCTCAATAGTCAGGGGAACCCACATTCACGCATTTGGGGTAAAAAAAAAAAAAATGTACATTTAAATTTTAGTTTAATAATCAAAATACTGAGCTTGAATATAGACTGCCTAATTTTGATTGAATGGCCACCAATGTTCCGCTTGTGTGAATGCGGGCAATGTTGACTGCAGGGGAGCTGGATCCCCCTATCAGATATGCATTTTCAGTGATTTGGCCATTTGCAGCAGCAAGTTTCTCAATTTTATTCCTCTTCTTTCTTTGGGAGTATCTCTGGTGAAAAATCTTAATGTTTTATCACTAAAAGGTGCTTTTGCACGCTGACTCCATTAGCCTTCTTCATGATATGTTGAGAAGTGTGATGGAGCCTGACAAAGAGAATAATAAAATGAGAGAAATAGGAAATATAGAATTGATAGAATGAAATTGATTGATTACCTGTGTGCAGTATATCTAAGATGCTCCAAAATGACATTTAGTTGAACTTCAAGTTCTTTAGCTCTATCCATCACTTCTTTAGTCTGAATTTTAGTATACAGAGATCTCCAAGCCGTTCTTCAATCCTTCTAACAGTACAAGGGATATTTCCGATAGTTTTGTTTCCAATAATTATAAAGAGAATCCATGCAGGTTTTTGCTTTTTTGTACAGAATGTTGATTGTTCCAAGTTTCTAATAATTTTCTCACAATAGTTAGTCCAAAACTGCTCAAACCTCTTTGGTCTGATTTTTATAGTTCTGTCATGAACAAAGGGAGAGATATAAATCATAATAGGCATATGCTCCAAGAAATGCTTGGTAAAATGAGAAACTTCTGCCTTTAGGTAATTGGTGATCCAATCATGGGGATTCCCAAATATCTTTCAAAGCTAACCTTAATATGAATTGAAGCTTCTTGATTGTTTGACCATTATGTAAAGGTCTCCAACAAAACCCAAGTTACTCAATGAGCATTCTTGTAAAATATCTCTAAAATTCTGAACAGTGTTAGCATCATAGAGGTTTCCCCAAATTTTCAGTTTGAGATAAAATAATATTAAAATCCCCAAATACTAACCAGTTAGAATTAACATAGGTCAAATACAAGGATTTTATTAAATTGCAGGTGGGATCTTTTTTTACCTTTCTCCGGATGACCATAAATGCCAGTGACTCACAAATTCAGAGTTAGTACTATCAGTTATAATCATATAGAATATGGTTTAGAGACATACCTCTAATGTCAGTGTTAACAGTATTGTATCATAAGCAAGACAAACCACCGACACTATGCTTACCTTCCATTGCACAACTCACAGCCACTAAACAGTCTTACAGCAACTGAACAGTCTAGGTTGCCAATGCTGCTAAGTTGGAACAAGTCATAATCTTTTGTTTTAGTTTCCATAATGAAAATCATATTAAGGTTCTTAAGAGAAATAATTTTCTTAAAGTCGACGACAATTCCAAGATATAATTATGCTTACTTCATGCATTACCATGTCAGTATTGGTTCGTATAATTTCATCTATTATTCTTCTTTTGCTTCCTGTGTTGGTTGGTTATATACACACCATCAGCATCTACGACTGCGAAGGACTGTCCACTGTTTGGTCGTTGTTGACCTGATTTTTGAACATACCCATGAATGAACCTTTGTTGATTTAATAATCATAGATCACCAACTGCTGTAGTATTGCTAGTTAGAATAGGTTGGTTTTGTCTTTTGCTTTCAAAGTATGTAGGATGCTCCTTTGTTGTTCCACTGCTACAGGCTTTTCTGCATTTTTGTCATTAAATTGTTCCTGCATATTTAGCTTAGCAAATTTTTGCAACATTAGTAGAAAACAGTTTGGATTTATAGGGACAATTTCCAGGATTGTTGTGATTAATAGTAATGCTACTGTGATATTTGTTTTTATCTTATATAATTCTTCTACCATATCTGATAGATTTCAACCATACCCTTAATTTATTATGATAATCATCAGATTTAGGCACATGTTTAGGGACTTTATAACAAGCAGAATCGTTATGTCCTAATAAACCACATGGAAAACAAAGTATTATCCCAAACCTTTCTAGAGACATGTCTCGAGAACCAGTTTGAGCCAAGAGTACTACCAATCCAAATCAGAAAAAAAAAAAAAAAAAAATCATTCCACCAAATACAATCATAATATGGGACCCTCAACACCCTTGACTCGGGTTAACCACCATAGTAAGGTCGTATTTGTTGGAGGAAATTGTTTCACTTAGCTATCACACACATACACTGATAATAGTTCCTTGGGAGAGAGTGAATTGATGAGAGATCAAAAAAACTTTTTATTAAAACTTGTGTATCAAGTAACACTAACAGTTTCCTTTTATAGGACCAGATTTAACTAACACAATCTAACAAACTCGTCACTTATAAACTAACTTTCAGTTAGTTAGTTACACACCAAAATAGGCAAGTAAGCTGTTTGAATTACTTTACGTTACTATTTGACCACCAAAACCTTACTCAAGAGAAAAGCTACTCCACTTAAAAGCCACTGCCTACATTTCCCTAACAGGCTATGATTAACCAACCCAAGACCCTTAATCTCATAACCTCTATTCGGCTTACAAGTTAACAAACCATATCACTCAAGGGATCTTGTTTTCCCCCCTTTGATTCAAACCAAAGGAACCTTCTTTGTAGCTTAACTACTCTTCTCCAAACCCTCATCAACATATTAAAAAGACATATAGGGATATTTCTTAGAATGGAATTAATTAGGAGTACTCTTCCTCGTATATTAACATATCTGTTACGCCAAGATCTGAGTCGACAAACCGGGAGAGTCTATTAACAGCTGCCAATTACATGCATACCTTCTAAGGATTTTCACCAATAGGTATACCCAAGTATTTGAATGGGACTGAAACAAGTTTACAGTTGAGAAAATAAGCATCCATATATAGTAAGAAATGAAAATAACACATTTATCCCTATAAGACTAATCTTCTAAAAGTTTACCTTCAAGCTTGATACCAATTACTTGAAGCACCTAAAATAGACTTCATATTCCTTAGGTTCTCCACTGTTGCCTCCCTAATAAAAAGAGTGTCACAAGAGCATAAGATGAGATAGCATCATTCTTGAGTTACCCTCACCAAAACCTGTAAACATTCCTAAATCCTAACTTCCTAGCATTTTTTAAAGGAAGAAATTCAACTTGTGCTCGCAATAGGTTCTTCAATTAAGATTAGTTGTTGCTTATTACAGTAAAAGCGTGATACTTACAAAATGTTTTAAAAAAAATGAGCAGTACATGTATAAAACTTAAAAGTCTGAGTTTTAGGGTGGAAATTTAACTATTTAAACATCTAAATCTTTGTCAATAGGAAAACTTTTAGGTCTTCTTGGTGGCCAGGATAATAAAAGTTATCATATTCTATCACAATTTAGTACTTGATGAGCCTGCAAGATATGAAGTTAATCTTGTCACTTTATTTATCACTAGTGAAATTTGTATCTTTTGTTGATGATTTGAAACAACAAATGCTAATATTTGTTAGTAATATGCCAGGAAAAGTGAAAAAAATTATCTCTTTAATAGTAATCACTTTCTTATAAAATGTTAATACTTGTGTTCCAACCTTGAGCATTAGTTTAGAAATAAGTGAAAAAATAGTCGGTATTGGTTCTTAATAAATGACTAATCATTTTTACTTTTTAGATATACTCAATTGGAAAGAACATTTATACCAAAAAAGGAGAAGAACAAGAAGTTGCAAAGAAGGAATTCATAGATACTCTCAAATTGTTGGAGGATCACTTGGGAGAGAAGTCTTATTTTGGAGGAGACAAATTTGGTTTTGTCGATATATCACTTATCCCATTCTACAGCCGATTAAAAGTTTATGAGACCTTTGGCAACCTCAATTTCGAAAATGAGTGTCCTAAGTTCATTGCTTGGGCCAAGAGATGCATGCAGATTGAAAGTGTTTCCAAGTCTCTTCCAGACCAGGATAAGATATACGAGTTCACTATGGACATGAGAAGGATTTTAGGCATTGAGTAG
Protein sequence

>MS.gene068678.t1

MNDEVILLDFWPSPFGIRVRIALAEKGIKYKYIEEELMSLKKSPLLLEMNPVQKKIPVLIHNGKPICESLIAVQYIDEVWNEKSPLLPSDPYQRSQALFWADYIDKMIYSIGKNIYTKKGEEQEVAKKEFIDTLKLLEDHLGEKSYFGGDKFGFVDISLIPFYSRLKVYETFGNLNFENECPKFIAWAKRCMQIESVSKSLPDQDKIYEFTMDMRRILGIE