AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063431

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063431.t1 MTR_2g070150 93.627 204 13 0 1 204 1 204 2.46e-146 406
MS.gene063431.t1 MTR_2g070140 95.074 203 10 0 17 219 1 203 1.08e-145 404
MS.gene063431.t1 MTR_2g070180 85.047 214 32 0 1 214 1 214 1.42e-141 394
MS.gene063431.t1 MTR_2g070130 77.169 219 50 0 1 219 1 219 2.64e-134 376
MS.gene063431.t1 MTR_2g070210 75.113 221 53 1 1 219 1 221 5.06e-128 360
MS.gene063431.t1 MTR_2g070200 70.136 221 64 2 1 219 1 221 9.06e-118 334
MS.gene063431.t1 MTR_2g070060 65.753 219 75 0 1 219 1 219 1.35e-111 318
MS.gene063431.t1 MTR_2g070070 65.297 219 76 0 1 219 1 219 6.56e-107 306
MS.gene063431.t1 MTR_3g467420 63.256 215 79 0 5 219 10 224 5.24e-106 305
MS.gene063431.t1 MTR_8g056940 64.840 219 77 0 1 219 1 219 3.91e-103 297
MS.gene063431.t1 MTR_3g467430 59.908 217 87 0 3 219 8 224 4.07e-100 290
MS.gene063431.t1 MTR_2g070110 62.100 219 82 1 1 219 1 218 4.44e-99 287
MS.gene063431.t1 MTR_2g070120 61.502 213 82 0 1 213 1 213 2.13e-94 275
MS.gene063431.t1 MTR_4g124130 58.182 220 91 1 1 219 1 220 7.35e-94 274
MS.gene063431.t1 MTR_5g076900 52.511 219 102 2 2 219 4 221 1.37e-80 240
MS.gene063431.t1 MTR_0186s0030 66.667 141 47 0 1 141 1 141 7.40e-65 197
MS.gene063431.t1 MTR_1g090060 44.762 210 111 3 4 209 3 211 1.00e-55 177
MS.gene063431.t1 MTR_8g087425 41.935 217 123 2 2 216 3 218 2.01e-53 171
MS.gene063431.t1 MTR_7g065740 44.340 212 110 5 3 209 6 214 1.54e-51 166
MS.gene063431.t1 MTR_4g019790 43.541 209 113 4 4 209 7 213 5.84e-51 165
MS.gene063431.t1 MTR_4g059730 42.056 214 117 4 1 209 1 212 2.19e-50 163
MS.gene063431.t1 MTR_7g065750 43.541 209 112 5 3 207 6 212 3.48e-50 163
MS.gene063431.t1 MTR_7g065720 42.453 212 114 6 3 209 6 214 5.39e-50 162
MS.gene063431.t1 MTR_3g099757 40.976 205 118 2 3 205 4 207 4.84e-49 160
MS.gene063431.t1 MTR_7g065660 40.476 210 120 4 3 209 6 213 6.38e-49 159
MS.gene063431.t1 MTR_1g090100 44.712 208 110 3 5 208 3 209 1.29e-48 159
MS.gene063431.t1 MTR_4g019780 39.234 209 124 2 3 209 7 214 3.26e-48 157
MS.gene063431.t1 MTR_5g040430 36.967 211 126 2 2 205 5 215 6.54e-48 157
MS.gene063431.t1 MTR_8g087410 42.157 204 115 2 4 205 6 208 7.29e-48 157
MS.gene063431.t1 MTR_5g037380 40.455 220 122 5 2 212 3 222 1.62e-47 156
MS.gene063431.t1 MTR_7g065630 40.000 210 117 5 3 209 24 227 1.10e-46 154
MS.gene063431.t1 MTR_1g090150 38.739 222 122 6 3 216 2 217 3.24e-46 153
MS.gene063431.t1 MTR_1g090070 39.810 211 121 4 4 209 9 218 3.76e-46 152
MS.gene063431.t1 MTR_7g065710 40.952 210 119 5 1 209 1 206 1.28e-45 151
MS.gene063431.t1 MTR_7g065270 40.191 209 120 5 3 208 6 212 2.63e-45 150
MS.gene063431.t1 MTR_7g065590 37.619 210 126 4 3 209 6 213 7.67e-45 149
MS.gene063431.t1 MTR_7g065600 38.710 217 125 5 3 216 6 217 4.14e-44 147
MS.gene063431.t1 MTR_7g065290 40.191 209 120 5 3 208 6 212 5.48e-44 147
MS.gene063431.t1 MTR_6g080440 40.314 191 109 3 18 205 17 205 6.41e-44 147
MS.gene063431.t1 MTR_1g090090 42.105 209 116 4 4 208 3 210 8.78e-44 146
MS.gene063431.t1 MTR_8g061950 37.736 212 123 3 3 205 4 215 3.92e-43 145
MS.gene063431.t1 MTR_7g065265 39.234 209 122 5 3 208 6 212 5.77e-43 144
MS.gene063431.t1 MTR_7g065700 41.905 210 117 5 1 209 4 209 6.73e-43 144
MS.gene063431.t1 MTR_1g115195 39.810 211 118 5 1 205 1 208 1.19e-42 143
MS.gene063431.t1 MTR_7g065680 40.476 210 116 5 3 209 6 209 2.51e-42 142
MS.gene063431.t1 MTR_7g065230 38.942 208 119 5 3 208 6 207 5.17e-42 142
MS.gene063431.t1 MTR_7g065640 37.500 208 111 4 3 209 6 195 1.99e-41 140
MS.gene063431.t1 MTR_7g065260 41.489 188 105 5 3 187 13 198 5.20e-36 127
MS.gene063431.t1 MTR_2g072120 67.123 73 23 1 47 118 1 73 5.74e-31 109
MS.gene063431.t1 MTR_4g134370 29.545 176 97 5 3 159 14 181 6.77e-15 71.2
MS.gene063431.t1 MTR_4g134380 30.409 171 100 5 4 159 15 181 1.54e-14 70.5
MS.gene063431.t1 MTR_4g134380 30.303 165 96 5 4 153 15 175 2.52e-13 65.9
MS.gene063431.t1 MTR_4g043640 41.176 68 33 1 129 189 18 85 3.35e-12 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063431.t1 AT1G78380 67.130 216 71 0 1 216 1 216 3.80e-111 317
MS.gene063431.t1 AT1G17180 63.927 219 79 0 1 219 1 219 9.06e-111 317
MS.gene063431.t1 AT1G78340 63.551 214 78 0 1 214 1 214 1.46e-106 306
MS.gene063431.t1 AT1G78370 64.651 215 76 0 1 215 1 215 1.47e-106 306
MS.gene063431.t1 AT1G17170 62.100 219 82 1 1 219 1 218 5.07e-105 302
MS.gene063431.t1 AT1G78360 62.273 220 82 1 1 219 1 220 1.96e-104 300
MS.gene063431.t1 AT1G78320 63.551 214 78 0 1 214 1 214 8.93e-103 296
MS.gene063431.t1 AT1G17190 57.209 215 92 0 3 217 4 218 4.29e-95 277
MS.gene063431.t1 AT1G53680 55.708 219 95 2 3 219 6 224 2.17e-92 270
MS.gene063431.t1 AT3G43800 54.167 216 95 3 3 214 4 219 1.45e-81 243
MS.gene063431.t1 AT1G78320 54.673 214 70 1 1 214 1 187 8.80e-81 239
MS.gene063431.t1 AT2G29420 41.463 205 117 2 2 204 7 210 8.89e-56 177
MS.gene063431.t1 AT2G29450 46.860 207 103 5 3 204 5 209 1.83e-53 171
MS.gene063431.t1 AT3G09270 41.232 211 119 4 3 209 5 214 2.04e-52 169
MS.gene063431.t1 AT2G29440 44.660 206 108 4 3 204 5 208 7.12e-52 167
MS.gene063431.t1 AT2G29490 41.121 214 120 4 3 212 6 217 2.05e-51 166
MS.gene063431.t1 AT2G29480 40.092 217 124 4 3 215 6 220 1.40e-49 161
MS.gene063431.t1 AT1G10360 41.860 215 117 4 2 208 3 217 2.27e-49 161
MS.gene063431.t1 AT1G59700 41.892 222 120 5 3 215 5 226 1.20e-48 159
MS.gene063431.t1 AT2G29460 38.249 217 128 4 3 215 6 220 4.18e-48 157
MS.gene063431.t1 AT2G29470 39.631 217 124 5 5 216 8 222 5.46e-48 157
MS.gene063431.t1 AT1G59670 43.498 223 115 5 3 215 5 226 1.02e-47 157
MS.gene063431.t1 AT1G10370 39.269 219 125 4 2 212 3 221 1.38e-46 154
MS.gene063431.t1 AT1G74590 34.081 223 133 3 3 215 6 224 1.33e-45 151
MS.gene063431.t1 AT1G27130 37.209 215 126 4 3 208 5 219 5.30e-43 144
MS.gene063431.t1 AT1G27140 40.376 213 117 4 3 205 5 217 1.07e-41 142
MS.gene063431.t1 AT1G69930 37.915 211 124 3 5 208 13 223 1.08e-41 141
MS.gene063431.t1 AT5G62480 33.632 223 136 3 3 214 7 228 3.14e-41 140
MS.gene063431.t1 AT1G69920 36.726 226 125 6 5 218 35 254 2.69e-39 136
MS.gene063431.t1 AT5G62480 32.000 175 83 3 3 168 7 154 1.74e-24 96.7
MS.gene063431.t1 AT5G62480 32.000 175 82 3 3 168 7 153 1.75e-24 96.7

Find 57 sgRNAs with CRISPR-Local

Find 86 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATTCTACACTTGGTTTAA+AGG 0.105597 2.3:+25817938 MS.gene063431:CDS
AGTACAAAGAAGAAGATTTA+AGG 0.224924 2.3:+25816766 MS.gene063431:CDS
GCAATTAAAGATTCACAAAT+TGG 0.245931 2.3:-25816861 None:intergenic
GTGAAATAGATCTATGAAAT+TGG 0.256148 2.3:+25817770 MS.gene063431:intron
TTCAGTATATTGATGAAGTT+TGG 0.281776 2.3:+25816886 MS.gene063431:CDS
AAGTGCTTCTGCTAGATTAC+TGG 0.343879 2.3:+25816685 MS.gene063431:CDS
ATGAAATTGGAAAGAACCTT+TGG 0.349218 2.3:+25817783 MS.gene063431:CDS
CTCAACCTGCATGCATCTCT+TGG 0.377767 2.3:-25818020 None:intergenic
TGGCCCAAGCAATGAACTTC+GGG 0.382323 2.3:-25818000 None:intergenic
TTACCATTATGAATGAGAAC+AGG 0.397263 2.3:-25816837 None:intergenic
CACTCATTCCATTCTACACT+TGG 0.402393 2.3:+25817930 MS.gene063431:CDS
AGAGATCACAAGCTAGATTC+TGG 0.406790 2.3:+25816946 MS.gene063431:CDS
TAGAATAGCCCTAGCTGAAA+AGG 0.409606 2.3:+25816731 MS.gene063431:CDS
ATCCCTGTTCTCATTCATAA+TGG 0.420755 2.3:+25816834 MS.gene063431:CDS
GATTACTGGGCAAGTCCATT+TGG 0.423782 2.3:+25816699 MS.gene063431:CDS
TTTAAAGGCTATGAGACCTT+TGG 0.432290 2.3:+25817953 MS.gene063431:CDS
AGATAAGGTGTATGGCTTCA+TGG 0.436683 2.3:+25818069 MS.gene063431:CDS
CTGGGAGACAAGACTTACTT+TGG 0.447631 2.3:+25817878 MS.gene063431:CDS
CCATACACCTTATCTTGATC+GGG 0.449833 2.3:-25818061 None:intergenic
CGTAGAAGCTCATAGATTGT+TGG 0.452212 2.3:+25817847 MS.gene063431:CDS
TACTTTGGAGGAGACAAGAT+TGG 0.453564 2.3:+25817893 MS.gene063431:CDS
TAGATTGTTGGAGCAAGAGC+TGG 0.455234 2.3:+25817859 MS.gene063431:CDS
ATGGCTTCATGGTGGAGATC+AGG 0.466419 2.3:+25818080 MS.gene063431:CDS
CTAGCTTGTGATCTCTGATA+AGG 0.467136 2.3:-25816939 None:intergenic
ATGCCCGAAGTTCATTGCTT+GGG 0.471730 2.3:+25817997 MS.gene063431:CDS
AATGCCCGAAGTTCATTGCT+TGG 0.481887 2.3:+25817996 MS.gene063431:CDS
CCCGATCAAGATAAGGTGTA+TGG 0.485562 2.3:+25818061 MS.gene063431:CDS
GTGGAGATCAGGAAGAGGTT+TGG 0.487397 2.3:+25818091 MS.gene063431:CDS
GAGATCACAAGCTAGATTCT+GGG 0.487661 2.3:+25816947 MS.gene063431:CDS
AAGAACCTTTGGACCAGAAA+AGG 0.491905 2.3:+25817794 MS.gene063431:CDS
ATTCTAACCCTCATGCCAAA+TGG 0.499058 2.3:-25816714 None:intergenic
CCTTTAAACCAAGTGTAGAA+TGG 0.500913 2.3:-25817938 None:intergenic
TTGGCCCAAGCAATGAACTT+CGG 0.506045 2.3:-25818001 None:intergenic
GCCATACACCTTATCTTGAT+CGG 0.506816 2.3:-25818062 None:intergenic
GGCTGATTATGTTGATAAGA+AGG 0.507102 2.3:+25816968 MS.gene063431:CDS
GGAGACAAGACTTACTTTGG+AGG 0.510834 2.3:+25817881 MS.gene063431:CDS
GGCAAGTCCATTTGGCATGA+GGG 0.529721 2.3:+25816707 MS.gene063431:CDS
ATCTTGATCGGGGACCGACT+TGG 0.544608 2.3:-25818050 None:intergenic
CTCTACATTGATGTTGCCAA+AGG 0.546992 2.3:-25817969 None:intergenic
AGAATAGCCCTAGCTGAAAA+GGG 0.548007 2.3:+25816732 MS.gene063431:CDS
GTCGGTCCCCGATCAAGATA+AGG 0.552105 2.3:+25818054 MS.gene063431:CDS
GGGCAAGTCCATTTGGCATG+AGG 0.566009 2.3:+25816706 MS.gene063431:CDS
GAAGAGGTTTGGCCTTGAGT+AGG 0.568829 2.3:+25818102 MS.gene063431:CDS
AGTGCTTCTGCTAGATTACT+GGG 0.569245 2.3:+25816686 MS.gene063431:CDS
TGGCAACATCAATGTAGAGA+AGG 0.574601 2.3:+25817973 MS.gene063431:CDS
GGTTGAGAGTGTTTCCAAGT+CGG 0.584489 2.3:+25818036 MS.gene063431:CDS
CAGAAGCACTTCATCAGCCA+TGG 0.585393 2.3:-25816673 None:intergenic
TTGGGCCAAGAGATGCATGC+AGG 0.591022 2.3:+25818015 MS.gene063431:CDS
TCATGGTGGAGATCAGGAAG+AGG 0.595602 2.3:+25818086 MS.gene063431:CDS
GATCTCTGATAAGGATCAGA+AGG 0.596783 2.3:-25816930 None:intergenic
AGATTGTTGGAGCAAGAGCT+GGG 0.600824 2.3:+25817860 MS.gene063431:CDS
TACCATTATGAATGAGAACA+GGG 0.607264 2.3:-25816836 None:intergenic
TAAGGATCAGAAGGCAACAA+AGG 0.613337 2.3:-25816921 None:intergenic
AAACATCTCCAACCTACTCA+AGG 0.616707 2.3:-25818114 None:intergenic
GGGTTCATTTGAAGTAACAA+AGG 0.626039 2.3:-25816798 None:intergenic
TAAGGTGTATGGCTTCATGG+TGG 0.710103 2.3:+25818072 MS.gene063431:CDS
CATACACCTTATCTTGATCG+GGG 0.719375 2.3:-25818060 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATATAATTGATTCATATTA+AGG - chr2.3:25817596-25817615 None:intergenic 15.0%
!!! TATTTTGAACAATTTATTAG+AGG + chr2.3:25817291-25817310 MS.gene063431:intron 15.0%
!! AAGTTTATATAAACTGTAAG+TGG - chr2.3:25817455-25817474 None:intergenic 20.0%
!! TAAGTTATTTATCCAAACAA+GGG + chr2.3:25817570-25817589 MS.gene063431:intron 20.0%
!! TTAAGTTATTTATCCAAACA+AGG + chr2.3:25817569-25817588 MS.gene063431:intron 20.0%
!!! GTTTTTTCATGAGAAAATAT+AGG + chr2.3:25817241-25817260 MS.gene063431:intron 20.0%
! AATAAAACTTTCACCAACAA+GGG - chr2.3:25817087-25817106 None:intergenic 25.0%
! AGTACAAAGAAGAAGATTTA+AGG + chr2.3:25816766-25816785 MS.gene063431:CDS 25.0%
! ATTTGAAGATAGTTGAGATT+TGG + chr2.3:25817625-25817644 MS.gene063431:intron 25.0%
! GCAATTAAAGATTCACAAAT+TGG - chr2.3:25816864-25816883 None:intergenic 25.0%
! GTGAAATAGATCTATGAAAT+TGG + chr2.3:25817770-25817789 MS.gene063431:intron 25.0%
! TTCAGTATATTGATGAAGTT+TGG + chr2.3:25816886-25816905 MS.gene063431:CDS 25.0%
! TTTCTCATGAAAAAACTTAC+AGG - chr2.3:25817237-25817256 None:intergenic 25.0%
!! GCTTAGAATTTGTTTATCAT+TGG + chr2.3:25817043-25817062 MS.gene063431:intron 25.0%
!!! CTAATTGAAATGTGCTTTTT+CGG + chr2.3:25817392-25817411 MS.gene063431:intron 25.0%
AACTTAATAGCTTAGTTAGC+TGG - chr2.3:25817556-25817575 None:intergenic 30.0%
ACATGCAATGAATCATACAA+AGG - chr2.3:25817012-25817031 None:intergenic 30.0%
ATGAAATTGGAAAGAACCTT+TGG + chr2.3:25817783-25817802 MS.gene063431:CDS 30.0%
ATGCAATGAATCATACAAAG+GGG - chr2.3:25817010-25817029 None:intergenic 30.0%
CATGCAATGAATCATACAAA+GGG - chr2.3:25817011-25817030 None:intergenic 30.0%
GAATAAAACTTTCACCAACA+AGG - chr2.3:25817088-25817107 None:intergenic 30.0%
TACCATTATGAATGAGAACA+GGG - chr2.3:25816839-25816858 None:intergenic 30.0%
TATTAGCAAGTATTAGTCCT+TGG + chr2.3:25817691-25817710 MS.gene063431:intron 30.0%
TTACCATTATGAATGAGAAC+AGG - chr2.3:25816840-25816859 None:intergenic 30.0%
AAGAAAAACAACAGTCACCA+AGG - chr2.3:25817711-25817730 None:intergenic 35.0%
ATCCCTGTTCTCATTCATAA+TGG + chr2.3:25816834-25816853 MS.gene063431:CDS 35.0%
CCATTCTACACTTGGTTTAA+AGG + chr2.3:25817938-25817957 MS.gene063431:CDS 35.0%
CCTTTAAACCAAGTGTAGAA+TGG - chr2.3:25817941-25817960 None:intergenic 35.0%
TATGCTCTCAAAGATAGCTT+AGG + chr2.3:25817425-25817444 MS.gene063431:intron 35.0%
TTCATATTAAGGCCCTTGTT+TGG - chr2.3:25817585-25817604 None:intergenic 35.0%
TTTAAAGGCTATGAGACCTT+TGG + chr2.3:25817953-25817972 MS.gene063431:CDS 35.0%
! ACAGGGATTTTCTTGTGAAT+AGG - chr2.3:25816822-25816841 None:intergenic 35.0%
! CAGGGATTTTCTTGTGAATA+GGG - chr2.3:25816821-25816840 None:intergenic 35.0%
! GGCTGATTATGTTGATAAGA+AGG + chr2.3:25816968-25816987 MS.gene063431:CDS 35.0%
! GGGTTCATTTGAAGTAACAA+AGG - chr2.3:25816801-25816820 None:intergenic 35.0%
! TTCTTGTTCTTCTCCTTTTC+TGG - chr2.3:25817810-25817829 None:intergenic 35.0%
!! TGGATATTTTTCAGCTTGCA+TGG + chr2.3:25817664-25817683 MS.gene063431:intron 35.0%
AAGAACCTTTGGACCAGAAA+AGG + chr2.3:25817794-25817813 MS.gene063431:CDS 40.0%
AAGTGCTTCTGCTAGATTAC+TGG + chr2.3:25816685-25816704 MS.gene063431:CDS 40.0%
AGAATAGCCCTAGCTGAAAA+GGG + chr2.3:25816732-25816751 MS.gene063431:CDS 40.0%
AGAGATCACAAGCTAGATTC+TGG + chr2.3:25816946-25816965 MS.gene063431:CDS 40.0%
AGATAAGGTGTATGGCTTCA+TGG + chr2.3:25818069-25818088 MS.gene063431:CDS 40.0%
AGTGCTTCTGCTAGATTACT+GGG + chr2.3:25816686-25816705 MS.gene063431:CDS 40.0%
ATTCTAACCCTCATGCCAAA+TGG - chr2.3:25816717-25816736 None:intergenic 40.0%
CACTCATTCCATTCTACACT+TGG + chr2.3:25817930-25817949 MS.gene063431:CDS 40.0%
CATACACCTTATCTTGATCG+GGG - chr2.3:25818063-25818082 None:intergenic 40.0%
CCATACACCTTATCTTGATC+GGG - chr2.3:25818064-25818083 None:intergenic 40.0%
CGTAGAAGCTCATAGATTGT+TGG + chr2.3:25817847-25817866 MS.gene063431:CDS 40.0%
CTCTACATTGATGTTGCCAA+AGG - chr2.3:25817972-25817991 None:intergenic 40.0%
GAGATCACAAGCTAGATTCT+GGG + chr2.3:25816947-25816966 MS.gene063431:CDS 40.0%
GATCTCTGATAAGGATCAGA+AGG - chr2.3:25816933-25816952 None:intergenic 40.0%
GCCATACACCTTATCTTGAT+CGG - chr2.3:25818065-25818084 None:intergenic 40.0%
TAAGGATCAGAAGGCAACAA+AGG - chr2.3:25816924-25816943 None:intergenic 40.0%
TAGAATAGCCCTAGCTGAAA+AGG + chr2.3:25816731-25816750 MS.gene063431:CDS 40.0%
TGGCAACATCAATGTAGAGA+AGG + chr2.3:25817973-25817992 MS.gene063431:CDS 40.0%
TTCACCAACAAGGGACAAAA+GGG - chr2.3:25817078-25817097 None:intergenic 40.0%
TTGGAACACTTACGAGCTAT+TGG + chr2.3:25817644-25817663 MS.gene063431:intron 40.0%
TTTCACCAACAAGGGACAAA+AGG - chr2.3:25817079-25817098 None:intergenic 40.0%
! CTAGCTTGTGATCTCTGATA+AGG - chr2.3:25816942-25816961 None:intergenic 40.0%
! CTTGATACCCTTTTCAGCTA+GGG - chr2.3:25816742-25816761 None:intergenic 40.0%
! TACTTTGGAGGAGACAAGAT+TGG + chr2.3:25817893-25817912 MS.gene063431:CDS 40.0%
!!! AGGAGACAAGATTGGTTTTG+TGG + chr2.3:25817901-25817920 MS.gene063431:CDS 40.0%
AATGCCCGAAGTTCATTGCT+TGG + chr2.3:25817996-25818015 MS.gene063431:CDS 45.0%
AGATTGTTGGAGCAAGAGCT+GGG + chr2.3:25817860-25817879 MS.gene063431:CDS 45.0%
ATGCCCGAAGTTCATTGCTT+GGG + chr2.3:25817997-25818016 MS.gene063431:CDS 45.0%
CCCGATCAAGATAAGGTGTA+TGG + chr2.3:25818061-25818080 MS.gene063431:CDS 45.0%
CTGGGAGACAAGACTTACTT+TGG + chr2.3:25817878-25817897 MS.gene063431:CDS 45.0%
GATTACTGGGCAAGTCCATT+TGG + chr2.3:25816699-25816718 MS.gene063431:CDS 45.0%
GGAGACAAGACTTACTTTGG+AGG + chr2.3:25817881-25817900 MS.gene063431:CDS 45.0%
TAAGGTGTATGGCTTCATGG+TGG + chr2.3:25818072-25818091 MS.gene063431:CDS 45.0%
TAGATTGTTGGAGCAAGAGC+TGG + chr2.3:25817859-25817878 MS.gene063431:CDS 45.0%
TTGGCCCAAGCAATGAACTT+CGG - chr2.3:25818004-25818023 None:intergenic 45.0%
! GCTTGATACCCTTTTCAGCT+AGG - chr2.3:25816743-25816762 None:intergenic 45.0%
! TTGACCCTTTTGTCCCTTGT+TGG + chr2.3:25817071-25817090 MS.gene063431:intron 45.0%
!! CTTCTCCTTTTCTGGTCCAA+AGG - chr2.3:25817802-25817821 None:intergenic 45.0%
!! GGTTGAGAGTGTTTCCAAGT+CGG + chr2.3:25818036-25818055 MS.gene063431:CDS 45.0%
CTCAACCTGCATGCATCTCT+TGG - chr2.3:25818023-25818042 None:intergenic 50.0%
GGCAAGTCCATTTGGCATGA+GGG + chr2.3:25816707-25816726 MS.gene063431:CDS 50.0%
GTGGAGATCAGGAAGAGGTT+TGG + chr2.3:25818091-25818110 MS.gene063431:CDS 50.0%
TGGCCCAAGCAATGAACTTC+GGG - chr2.3:25818003-25818022 None:intergenic 50.0%
! ATGGCTTCATGGTGGAGATC+AGG + chr2.3:25818080-25818099 MS.gene063431:CDS 50.0%
! TCATGGTGGAGATCAGGAAG+AGG + chr2.3:25818086-25818105 MS.gene063431:CDS 50.0%
ATCTTGATCGGGGACCGACT+TGG - chr2.3:25818053-25818072 None:intergenic 55.0%
GGGCAAGTCCATTTGGCATG+AGG + chr2.3:25816706-25816725 MS.gene063431:CDS 55.0%
GTCGGTCCCCGATCAAGATA+AGG + chr2.3:25818054-25818073 MS.gene063431:CDS 55.0%
TTGGGCCAAGAGATGCATGC+AGG + chr2.3:25818015-25818034 MS.gene063431:CDS 55.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 25816675 25818123 25816675 ID=MS.gene063431
chr2.3 mRNA 25816675 25818123 25816675 ID=MS.gene063431.t1;Parent=MS.gene063431
chr2.3 exon 25816675 25816989 25816675 ID=MS.gene063431.t1.exon1;Parent=MS.gene063431.t1
chr2.3 CDS 25816675 25816989 25816675 ID=cds.MS.gene063431.t1;Parent=MS.gene063431.t1
chr2.3 exon 25817779 25818123 25817779 ID=MS.gene063431.t1.exon2;Parent=MS.gene063431.t1
chr2.3 CDS 25817779 25818123 25817779 ID=cds.MS.gene063431.t1;Parent=MS.gene063431.t1
Gene Sequence

>MS.gene063431

ATGGCTGATGAAGTGCTTCTGCTAGATTACTGGGCAAGTCCATTTGGCATGAGGGTTAGAATAGCCCTAGCTGAAAAGGGTATCAAGCATGAGTACAAAGAAGAAGATTTAAGGAACAAAAGTCCTTTGTTACTTCAAATGAACCCTATTCACAAGAAAATCCCTGTTCTCATTCATAATGGTAAACCAATTTGTGAATCTTTAATTGCTGTTCAGTATATTGATGAAGTTTGGAATGAGAAATCTCCTTTGTTGCCTTCTGATCCTTATCAGAGATCACAAGCTAGATTCTGGGCTGATTATGTTGATAAGAAGGTATATAAATTTGCATACCCCTTTGTATGATTCATTGCATGTCATTGTTTGTTGCTTAGAATTTGTTTATCATTGGTTTTGTTGACCCTTTTGTCCCTTGTTGGTGAAAGTTTTATTCTTCTATATTTTTAGTAGTGTAGTATTAATTCTTTAATTAATTCTTTTGCATGTGATTGTTTGTGCTTCTTTTACATTTCTGAAATTTAAGTTTTATTTATTTATTTTACATTTTTTTAAATTATTACCTGTAAGTTTTTTCATGAGAAAATATAGGACTGTGCATTCAGCTTAACTTAGAGCTTATTTTGAACAATTTATTAGAGGTAATTTATAGCATTTGTGAGAATGTTTTCTGAGTGTTAAGCAAAACAGCTTATTCATATGTCTATAATCTGCTTTTAGCTAATTGAAATGTGCTTTTTCGGCTTAATTTCATATGCTCTCAAAGATAGCTTAGGAAAACCACTTACAGTTTATATAAACTTATAGATAAGTTAATCTATGACAAATAACGCTTGTTATAAAAATCATTTATATTTGAGCACTTTTATGATAACAAGTAGCCAGCTAACTAAGCTATTAAGTTATTTATCCAAACAAGGGCCTTAATATGAATCAATTATATGTTTCTAAGTATTTGAAGATAGTTGAGATTTGGAACACTTACGAGCTATTGGATATTTTTCAGCTTGCATGGTCACTATTAGCAAGTATTAGTCCTTGGTGACTGTTGTTTTTCTTGTTATTACATTGATGATCTAATTGTGTGTGATTCTCATTGTGAAATAGATCTATGAAATTGGAAAGAACCTTTGGACCAGAAAAGGAGAAGAACAAGAAGCTGCGAAGAAAGAATTCGTAGAAGCTCATAGATTGTTGGAGCAAGAGCTGGGAGACAAGACTTACTTTGGAGGAGACAAGATTGGTTTTGTGGATGTAGCACTCATTCCATTCTACACTTGGTTTAAAGGCTATGAGACCTTTGGCAACATCAATGTAGAGAAGGAATGCCCGAAGTTCATTGCTTGGGCCAAGAGATGCATGCAGGTTGAGAGTGTTTCCAAGTCGGTCCCCGATCAAGATAAGGTGTATGGCTTCATGGTGGAGATCAGGAAGAGGTTTGGCCTTGAGTAG
Protein sequence

>MS.gene063431.t1

MADEVLLLDYWASPFGMRVRIALAEKGIKHEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESLIAVQYIDEVWNEKSPLLPSDPYQRSQARFWADYVDKKIYEIGKNLWTRKGEEQEAAKKEFVEAHRLLEQELGDKTYFGGDKIGFVDVALIPFYTWFKGYETFGNINVEKECPKFIAWAKRCMQVESVSKSVPDQDKVYGFMVEIRKRFGLE