Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43462.t1 | XP_013458692.1 | 96.5 | 230 | 7 | 1 | 4 | 233 | 2 | 230 | 1.80E-121 | 445.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43462.t1 | P57108 | 66.2 | 222 | 71 | 2 | 6 | 227 | 2 | 219 | 1.3e-80 | 300.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43462.t1 | A0A072USC9 | 96.5 | 230 | 7 | 1 | 4 | 233 | 2 | 230 | 1.3e-121 | 445.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43462.t1 | MTR_4g134370 | 96.522 | 230 | 7 | 1 | 4 | 233 | 2 | 230 | 3.45e-166 | 457 |
| MS.gene43462.t1 | MTR_4g134380 | 84.279 | 229 | 31 | 1 | 1 | 229 | 3 | 226 | 8.16e-144 | 401 |
| MS.gene43462.t1 | MTR_4g134380 | 83.146 | 178 | 25 | 1 | 1 | 178 | 3 | 175 | 3.01e-108 | 309 |
| MS.gene43462.t1 | MTR_4g134360 | 86.508 | 126 | 14 | 1 | 21 | 146 | 16 | 138 | 5.04e-75 | 223 |
| MS.gene43462.t1 | MTR_2g070150 | 31.034 | 174 | 101 | 5 | 15 | 184 | 1 | 159 | 1.65e-15 | 72.8 |
| MS.gene43462.t1 | MTR_2g070180 | 29.213 | 178 | 99 | 5 | 15 | 184 | 1 | 159 | 2.98e-14 | 69.7 |
| MS.gene43462.t1 | MTR_2g070210 | 28.182 | 220 | 129 | 7 | 15 | 222 | 1 | 203 | 4.16e-14 | 69.3 |
| MS.gene43462.t1 | MTR_3g450790 | 32.903 | 155 | 95 | 4 | 32 | 180 | 15 | 166 | 8.78e-14 | 68.2 |
| MS.gene43462.t1 | MTR_8g061950 | 27.928 | 222 | 134 | 8 | 17 | 224 | 4 | 213 | 1.14e-13 | 68.2 |
| MS.gene43462.t1 | MTR_3g450930 | 32.530 | 166 | 97 | 5 | 28 | 184 | 11 | 170 | 1.99e-13 | 67.4 |
| MS.gene43462.t1 | MTR_7g065720 | 26.699 | 206 | 122 | 6 | 32 | 225 | 21 | 209 | 3.68e-13 | 66.6 |
| MS.gene43462.t1 | MTR_3g064700 | 36.792 | 106 | 66 | 1 | 21 | 125 | 5 | 110 | 1.17e-12 | 65.1 |
| MS.gene43462.t1 | MTR_2g070200 | 29.310 | 174 | 105 | 6 | 15 | 184 | 1 | 160 | 3.27e-12 | 63.9 |
| MS.gene43462.t1 | MTR_2g070140 | 31.646 | 158 | 89 | 5 | 31 | 184 | 1 | 143 | 3.86e-12 | 63.5 |
| MS.gene43462.t1 | MTR_1g115195 | 28.910 | 211 | 129 | 8 | 21 | 222 | 6 | 204 | 3.99e-12 | 63.9 |
| MS.gene43462.t1 | MTR_0186s0030 | 36.458 | 96 | 57 | 2 | 15 | 109 | 1 | 93 | 1.01e-11 | 61.2 |
| MS.gene43462.t1 | MTR_7g065230 | 28.037 | 214 | 135 | 7 | 21 | 230 | 10 | 208 | 1.01e-11 | 62.8 |
| MS.gene43462.t1 | MTR_2g070130 | 27.586 | 174 | 107 | 5 | 15 | 184 | 1 | 159 | 2.89e-11 | 61.6 |
| MS.gene43462.t1 | MTR_4g124130 | 30.994 | 171 | 106 | 5 | 15 | 184 | 1 | 160 | 3.40e-11 | 61.2 |
| MS.gene43462.t1 | MTR_5g090910 | 28.814 | 177 | 118 | 5 | 26 | 196 | 9 | 183 | 4.66e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43462.t1 | AT2G02390 | 61.860 | 215 | 81 | 1 | 13 | 227 | 3 | 216 | 3.93e-95 | 278 |
| MS.gene43462.t1 | AT2G02380 | 62.559 | 211 | 78 | 1 | 17 | 227 | 10 | 219 | 1.80e-94 | 276 |
| MS.gene43462.t1 | AT2G02390 | 59.910 | 222 | 81 | 2 | 13 | 227 | 3 | 223 | 4.33e-92 | 270 |
| MS.gene43462.t1 | AT2G02390 | 63.298 | 188 | 68 | 1 | 13 | 200 | 3 | 189 | 4.02e-82 | 243 |
| MS.gene43462.t1 | AT2G02390 | 60.119 | 168 | 66 | 1 | 60 | 227 | 21 | 187 | 1.79e-70 | 214 |
| MS.gene43462.t1 | AT2G30870 | 34.194 | 155 | 93 | 3 | 32 | 180 | 15 | 166 | 6.27e-16 | 74.3 |
| MS.gene43462.t1 | AT2G30860 | 33.775 | 151 | 83 | 4 | 32 | 180 | 15 | 150 | 8.85e-13 | 64.7 |
| MS.gene43462.t1 | AT3G09270 | 28.704 | 216 | 120 | 9 | 21 | 221 | 9 | 205 | 1.29e-12 | 65.5 |
| MS.gene43462.t1 | AT2G30860 | 33.333 | 174 | 83 | 6 | 32 | 187 | 15 | 173 | 1.57e-12 | 65.1 |
| MS.gene43462.t1 | AT1G78340 | 26.396 | 197 | 122 | 7 | 15 | 203 | 1 | 182 | 1.59e-11 | 62.4 |
| MS.gene43462.t1 | AT1G78380 | 26.705 | 176 | 102 | 5 | 15 | 182 | 1 | 157 | 2.41e-11 | 61.6 |
| MS.gene43462.t1 | AT1G78320 | 32.759 | 116 | 73 | 3 | 15 | 128 | 1 | 113 | 2.89e-11 | 61.6 |
| MS.gene43462.t1 | AT1G17170 | 27.811 | 169 | 95 | 5 | 15 | 176 | 1 | 149 | 5.00e-11 | 60.8 |
| MS.gene43462.t1 | AT1G17180 | 33.333 | 96 | 60 | 2 | 15 | 109 | 1 | 93 | 7.94e-11 | 60.5 |
Find 39 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATACATACCAGGGTATTA+AGG | 0.307259 | 8.4:-423859 | None:intergenic |
| AGCTGATTCTGTATTCATAT+TGG | 0.330337 | 8.4:+423208 | MS.gene43462:CDS |
| CAACTGCTTTGTACTCATAT+TGG | 0.338820 | 8.4:-423281 | None:intergenic |
| GGCAACGTCTCCCGGAATGC+TGG | 0.346061 | 8.4:-427398 | None:intergenic |
| ATTATGCGATCCCAGCATTC+CGG | 0.359242 | 8.4:+427387 | MS.gene43462:CDS |
| CAAAAGAGCTATCAATTTCC+AGG | 0.361331 | 8.4:+423660 | MS.gene43462:CDS |
| GCTGCATCTGGTTGATTCTC+TGG | 0.375629 | 8.4:-427419 | None:intergenic |
| CTCAGGTAGCCTGCTGCATC+TGG | 0.379979 | 8.4:-427431 | None:intergenic |
| GCAGGGCCATCGACGAGAAC+AGG | 0.414471 | 8.4:-423479 | None:intergenic |
| GATTCTCTGGCAACGTCTCC+CGG | 0.429343 | 8.4:-427406 | None:intergenic |
| TTTGTTCCTGTTCTCGTCGA+TGG | 0.450370 | 8.4:+423473 | MS.gene43462:CDS |
| AGAACAGGAACAAAACCAAC+AGG | 0.454426 | 8.4:-423464 | None:intergenic |
| TTATGCGATCCCAGCATTCC+GGG | 0.466888 | 8.4:+427388 | MS.gene43462:CDS |
| ACTCATATTGGAGACCTTTG+AGG | 0.469153 | 8.4:-423269 | None:intergenic |
| GTCCAGAGTGTAATTAGAAA+AGG | 0.497149 | 8.4:+424045 | MS.gene43462:CDS |
| GTAATTAGAAAAGGCTTCAC+AGG | 0.504567 | 8.4:+424054 | MS.gene43462:CDS |
| GCAACGTCTCCCGGAATGCT+GGG | 0.507165 | 8.4:-427397 | None:intergenic |
| CGTGTAATCTTGATAGAGTA+GGG | 0.516880 | 8.4:-427358 | None:intergenic |
| GGGAGCAAAGGATGTTGTTG+AGG | 0.523337 | 8.4:-423625 | None:intergenic |
| TCGTGTAATCTTGATAGAGT+AGG | 0.525508 | 8.4:-427359 | None:intergenic |
| CTAATTACACTCTGGACCCA+TGG | 0.531500 | 8.4:-424039 | None:intergenic |
| GCATTGCTCGCAGTATTTGG+AGG | 0.532414 | 8.4:+423594 | MS.gene43462:intron |
| AGCTATTAAAAGAACACGCT+GGG | 0.535135 | 8.4:+426312 | MS.gene43462:CDS |
| AAGGGAGAACAATATCATCC+TGG | 0.546207 | 8.4:+423312 | MS.gene43462:CDS |
| TTTCTCAAGCTCAACCCTGT+TGG | 0.559898 | 8.4:+423449 | MS.gene43462:CDS |
| CACGCTGGGAGATATGCTAC+TGG | 0.561914 | 8.4:+426326 | MS.gene43462:CDS |
| GGTTGAGAGCAATTCGAACT+CGG | 0.563925 | 8.4:-423248 | None:intergenic |
| GAGAATCAACCAGATGCAGC+AGG | 0.565566 | 8.4:+427422 | MS.gene43462:CDS |
| CAGTCCCAAATTACTGACTC+AGG | 0.569373 | 8.4:-427448 | None:intergenic |
| CGAATTGCTCTCAACCTCAA+AGG | 0.578475 | 8.4:+423255 | MS.gene43462:CDS |
| TAGAAGCAGCATCTAACTGA+GGG | 0.581371 | 8.4:-426737 | None:intergenic |
| TGAATATCAGTAGGGAGCAA+AGG | 0.581413 | 8.4:-423637 | None:intergenic |
| AAGCTATTAAAAGAACACGC+TGG | 0.608867 | 8.4:+426311 | MS.gene43462:CDS |
| GAGAGCAATTCGAACTCGGA+AGG | 0.617162 | 8.4:-423244 | None:intergenic |
| TCTTCAAAACCTTAATACCC+TGG | 0.637265 | 8.4:+423850 | MS.gene43462:CDS |
| TTAGAAGCAGCATCTAACTG+AGG | 0.652562 | 8.4:-426738 | None:intergenic |
| TAAGAGATTCAACATTGACA+TGG | 0.678314 | 8.4:+426758 | MS.gene43462:CDS |
| GAACAGGAACAAAACCAACA+GGG | 0.722903 | 8.4:-423463 | None:intergenic |
| AGAAGCAGCATCTAACTGAG+GGG | 0.751646 | 8.4:-426736 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTATTACTTTATACAT+CGG | - | chr8.4:426530-426549 | None:intergenic | 10.0% |
| !!! | CTAATTTTTTTTTTTTGAAA+TGG | + | chr8.4:426402-426421 | MS.gene43462:intron | 10.0% |
| !! | AAAATCTGAAAACTAATAAA+AGG | + | chr8.4:426426-426445 | MS.gene43462:intron | 15.0% |
| !! | AAATATGCTTTATAGATTAT+TGG | - | chr8.4:424427-424446 | None:intergenic | 15.0% |
| !! | TCTGTTTGATTAAAAAAATT+CGG | + | chr8.4:427104-427123 | MS.gene43462:intron | 15.0% |
| !! | TTCATTATAATTTCAAATCT+AGG | + | chr8.4:424810-424829 | MS.gene43462:intron | 15.0% |
| !!! | AAAATATTTTTAACCAGTAA+AGG | - | chr8.4:426195-426214 | None:intergenic | 15.0% |
| !!! | AATATAAATTTCATTTTCTC+TGG | - | chr8.4:425439-425458 | None:intergenic | 15.0% |
| !!! | GTTTTTTTATTTCTCTTATT+AGG | - | chr8.4:425582-425601 | None:intergenic | 15.0% |
| !!! | TGTTTTTAGGAATATATTTT+CGG | + | chr8.4:426656-426675 | MS.gene43462:intron | 15.0% |
| !!! | TTGTTTTGTTCTTTTTTTAA+AGG | + | chr8.4:423909-423928 | MS.gene43462:intron | 15.0% |
| !! | AAAGATTAATTAAGCATACA+AGG | - | chr8.4:423392-423411 | None:intergenic | 20.0% |
| !! | AATAAAGTGGATCATAAAAT+TGG | + | chr8.4:425905-425924 | MS.gene43462:intron | 20.0% |
| !! | AGAATAAACAATGAACTTTA+AGG | + | chr8.4:425049-425068 | MS.gene43462:intron | 20.0% |
| !! | AGTAAATAAATCCTTTCAAA+AGG | + | chr8.4:426449-426468 | MS.gene43462:intron | 20.0% |
| !! | ATGTTAAATAATAAATGCTG+GGG | + | chr8.4:424903-424922 | MS.gene43462:intron | 20.0% |
| !! | CAAAAGTAAACAGATAAATA+CGG | + | chr8.4:425319-425338 | MS.gene43462:intron | 20.0% |
| !! | CATGTATATAATGAAATGTA+TGG | + | chr8.4:426797-426816 | MS.gene43462:intron | 20.0% |
| !! | CATGTTAAATAATAAATGCT+GGG | + | chr8.4:424902-424921 | MS.gene43462:intron | 20.0% |
| !! | GTAAATAAATCCTTTCAAAA+GGG | + | chr8.4:426450-426469 | MS.gene43462:intron | 20.0% |
| !! | TAAAGTTCATTGTTTATTCT+TGG | - | chr8.4:425049-425068 | None:intergenic | 20.0% |
| !! | TCATGTTAAATAATAAATGC+TGG | + | chr8.4:424901-424920 | MS.gene43462:intron | 20.0% |
| !!! | AGCATTTGTTATTAAAAAAG+AGG | - | chr8.4:426067-426086 | None:intergenic | 20.0% |
| !!! | CAAGTTTTTGAAACTTAATA+TGG | + | chr8.4:426606-426625 | MS.gene43462:intron | 20.0% |
| !!! | TACAATTTTTTAACTGTTAG+AGG | - | chr8.4:424480-424499 | None:intergenic | 20.0% |
| !!! | TCTTACTTCTTCAAAATTTT+AGG | + | chr8.4:423886-423905 | MS.gene43462:intron | 20.0% |
| !!! | TCTTTTGCTACTATTTTTAT+TGG | - | chr8.4:424102-424121 | None:intergenic | 20.0% |
| !!! | TGCATCATATTCTAAAATAT+CGG | - | chr8.4:426562-426581 | None:intergenic | 20.0% |
| !!! | TTAATCCAAAAATCTGAAAT+CGG | + | chr8.4:424584-424603 | MS.gene43462:intron | 20.0% |
| !!! | TTTAACTTTATAGATCCTTT+TGG | + | chr8.4:424250-424269 | MS.gene43462:intron | 20.0% |
| ! | AAAACCAAATAGGTAAAACA+TGG | + | chr8.4:425710-425729 | MS.gene43462:intron | 25.0% |
| ! | AAACCAAATAGGTAAAACAT+GGG | + | chr8.4:425711-425730 | MS.gene43462:intron | 25.0% |
| ! | AAAGCATATTTCCATATTGT+GGG | + | chr8.4:424436-424455 | MS.gene43462:intron | 25.0% |
| ! | ACTTACCTAACAAAATAAAG+TGG | + | chr8.4:425892-425911 | MS.gene43462:intron | 25.0% |
| ! | AGACATTGTAGATTTAGAAA+AGG | - | chr8.4:423548-423567 | None:intergenic | 25.0% |
| ! | ATATAGAAAGTTGTAAACTG+TGG | - | chr8.4:425766-425785 | None:intergenic | 25.0% |
| ! | ATATATCATATACTGCATCA+TGG | - | chr8.4:425191-425210 | None:intergenic | 25.0% |
| ! | ATTCATTTCAAAGTTCAAAC+AGG | - | chr8.4:425467-425486 | None:intergenic | 25.0% |
| ! | CAAAAATAAACTGGTCAATA+TGG | + | chr8.4:427201-427220 | MS.gene43462:intron | 25.0% |
| ! | CACTTCTAAACTTATATTGT+AGG | - | chr8.4:424318-424337 | None:intergenic | 25.0% |
| ! | TAAAGCATATTTCCATATTG+TGG | + | chr8.4:424435-424454 | MS.gene43462:intron | 25.0% |
| ! | TAGCATATTGCATATGATAA+CGG | + | chr8.4:424195-424214 | MS.gene43462:intron | 25.0% |
| ! | TATATCTCAAAATTTGTCCT+TGG | - | chr8.4:425024-425043 | None:intergenic | 25.0% |
| ! | TGAAGGTTTCAAAAATAAAC+TGG | + | chr8.4:427192-427211 | MS.gene43462:intron | 25.0% |
| ! | TGATTAAAAAAATTCGGAGT+TGG | + | chr8.4:427110-427129 | MS.gene43462:intron | 25.0% |
| ! | TGTTAAATAATAAATGCTGG+GGG | + | chr8.4:424904-424923 | MS.gene43462:intron | 25.0% |
| !! | AAAGCAGTTGATCTTTTTAA+GGG | + | chr8.4:423294-423313 | MS.gene43462:CDS | 25.0% |
| !! | AACTTAATATGGTTAGTTGT+AGG | + | chr8.4:426617-426636 | MS.gene43462:intron | 25.0% |
| !! | AGAAAAATTAAAGTACTCCA+AGG | + | chr8.4:425004-425023 | MS.gene43462:intron | 25.0% |
| !! | ATTTAGAATTTCTAAGCAAC+AGG | + | chr8.4:425636-425655 | MS.gene43462:intron | 25.0% |
| !! | GCATATATATAACCATTTTC+AGG | + | chr8.4:424550-424569 | MS.gene43462:intron | 25.0% |
| !! | TGTTGCTTAGAAATTCTAAA+TGG | - | chr8.4:425637-425656 | None:intergenic | 25.0% |
| !!! | ATCATATTCTAAAATATCGG+AGG | - | chr8.4:426559-426578 | None:intergenic | 25.0% |
| !!! | ATGATCCACTTTATTTTGTT+AGG | - | chr8.4:425900-425919 | None:intergenic | 25.0% |
| !!! | ATGTTTTGTTGATTCAAACT+AGG | + | chr8.4:423137-423156 | MS.gene43462:intron | 25.0% |
| !!! | ATTGTTTTTACTTACTAGAG+GGG | - | chr8.4:425865-425884 | None:intergenic | 25.0% |
| !!! | CATTGTTTTTACTTACTAGA+GGG | - | chr8.4:425866-425885 | None:intergenic | 25.0% |
| !!! | GGAGTACTTTAATTTTTCTA+AGG | - | chr8.4:425003-425022 | None:intergenic | 25.0% |
| !!! | TCATTGTTTTTACTTACTAG+AGG | - | chr8.4:425867-425886 | None:intergenic | 25.0% |
| !!! | TTGATGTTTTTATCGTAACA+GGG | - | chr8.4:426884-426903 | None:intergenic | 25.0% |
| !!! | TTTTCTTTTTCACTGTAAGT+TGG | + | chr8.4:423705-423724 | MS.gene43462:intron | 25.0% |
| AAACCTATAACAATTGATCC+AGG | + | chr8.4:424688-424707 | MS.gene43462:intron | 30.0% | |
| AAACTTGCGATCATTAACTT+TGG | - | chr8.4:426593-426612 | None:intergenic | 30.0% | |
| AAACTTGTATCTAGTAAGGA+GGG | - | chr8.4:426226-426245 | None:intergenic | 30.0% | |
| AAAGAGTCAAAAATAACAGC+AGG | - | chr8.4:423500-423519 | None:intergenic | 30.0% | |
| AACATGTTTAACCATGAAAC+AGG | + | chr8.4:425245-425264 | MS.gene43462:intron | 30.0% | |
| AAGAGTCAAAAATAACAGCA+GGG | - | chr8.4:423499-423518 | None:intergenic | 30.0% | |
| AATGCAATTTGATACATGAC+AGG | - | chr8.4:427283-427302 | None:intergenic | 30.0% | |
| ACTGAAACTTGTATCTAGTA+AGG | - | chr8.4:426230-426249 | None:intergenic | 30.0% | |
| AGAGTGGCATTTAATGTTAA+TGG | + | chr8.4:426004-426023 | MS.gene43462:intron | 30.0% | |
| AGTGCTCTTGAAATTCTAAT+GGG | - | chr8.4:425528-425547 | None:intergenic | 30.0% | |
| ATAACAAATGCTACTGTAGT+TGG | + | chr8.4:426075-426094 | MS.gene43462:intron | 30.0% | |
| ATATGCATGACATAATTGAG+TGG | - | chr8.4:424144-424163 | None:intergenic | 30.0% | |
| ATTAACATTAAATGCCACTC+TGG | - | chr8.4:426005-426024 | None:intergenic | 30.0% | |
| ATTGACATGGTAGTATTCTA+TGG | + | chr8.4:426771-426790 | MS.gene43462:intron | 30.0% | |
| CATACAAGGTTGTATGTAAT+GGG | - | chr8.4:423378-423397 | None:intergenic | 30.0% | |
| CTGTTGATACAAAACCAAAT+AGG | + | chr8.4:425700-425719 | MS.gene43462:intron | 30.0% | |
| GCAAATGAAGAAGTAAACAA+AGG | + | chr8.4:425555-425574 | MS.gene43462:intron | 30.0% | |
| GTTAAATAATAAATGCTGGG+GGG | + | chr8.4:424905-424924 | MS.gene43462:intron | 30.0% | |
| GTTGAAGAAAATATTCACTG+TGG | + | chr8.4:426026-426045 | MS.gene43462:intron | 30.0% | |
| TAAGAGATTCAACATTGACA+TGG | + | chr8.4:426758-426777 | MS.gene43462:CDS | 30.0% | |
| TACGATAAAAACATCAAGCA+AGG | + | chr8.4:426887-426906 | MS.gene43462:intron | 30.0% | |
| TACTGCATCATGGAAATTTA+AGG | - | chr8.4:425181-425200 | None:intergenic | 30.0% | |
| TATATTTCCTTCCTGTTTCA+TGG | - | chr8.4:425259-425278 | None:intergenic | 30.0% | |
| TCAATTGTTATAGGTTTGAG+TGG | - | chr8.4:424685-424704 | None:intergenic | 30.0% | |
| TCATGTTCATTATCATTTGC+AGG | + | chr8.4:426698-426717 | MS.gene43462:intron | 30.0% | |
| TGCAGTATATGATATATCAC+TGG | + | chr8.4:425194-425213 | MS.gene43462:intron | 30.0% | |
| TGGATCATAAAATTGGTCAA+AGG | + | chr8.4:425912-425931 | MS.gene43462:intron | 30.0% | |
| TGTTTCATGGTTAAACATGT+TGG | - | chr8.4:425246-425265 | None:intergenic | 30.0% | |
| ! | AAACATGTTGGTTGTGATTT+AGG | - | chr8.4:425234-425253 | None:intergenic | 30.0% |
| ! | AAGCACATTTGCATGTTTTT+AGG | + | chr8.4:426643-426662 | MS.gene43462:intron | 30.0% |
| ! | AGCTGATTCTGTATTCATAT+TGG | + | chr8.4:423208-423227 | MS.gene43462:CDS | 30.0% |
| ! | ATTTTTAACCAGTAAAGGAG+AGG | - | chr8.4:426190-426209 | None:intergenic | 30.0% |
| ! | CAAAGCAGTTGATCTTTTTA+AGG | + | chr8.4:423293-423312 | MS.gene43462:CDS | 30.0% |
| ! | CATTGCTAGCCAATATTTTT+GGG | - | chr8.4:426484-426503 | None:intergenic | 30.0% |
| ! | CTCTTTTGTGAATATCAGTA+GGG | - | chr8.4:423648-423667 | None:intergenic | 30.0% |
| ! | TAAATTTCATTTTCTCTGGC+AGG | - | chr8.4:425435-425454 | None:intergenic | 30.0% |
| ! | TCATACGTAAATGCAACTTT+TGG | - | chr8.4:424291-424310 | None:intergenic | 30.0% |
| ! | TTTTTATCGTAACAGGGAAA+CGG | - | chr8.4:426878-426897 | None:intergenic | 30.0% |
| !! | CTTGATGTTTTTATCGTAAC+AGG | - | chr8.4:426885-426904 | None:intergenic | 30.0% |
| !! | TCAAATTCATGTTCTGGAAA+TGG | + | chr8.4:423768-423787 | MS.gene43462:intron | 30.0% |
| !!! | AACTTTTGGTTCTTCACTTT+TGG | - | chr8.4:424277-424296 | None:intergenic | 30.0% |
| !!! | TGACTCTTTTGCTATTATCA+TGG | + | chr8.4:423511-423530 | MS.gene43462:CDS | 30.0% |
| !!! | TGCTACTATTTTTATTGGTG+AGG | - | chr8.4:424097-424116 | None:intergenic | 30.0% |
| !!! | TTTTTTAACTGTTAGAGGCT+AGG | - | chr8.4:424475-424494 | None:intergenic | 30.0% |
| AACAAATGTTCTTTCCACCA+GGG | - | chr8.4:425950-425969 | None:intergenic | 35.0% | |
| AACGGATCATCAAATGAACA+AGG | + | chr8.4:424213-424232 | MS.gene43462:intron | 35.0% | |
| AAGATGTGACATACATACCA+GGG | - | chr8.4:423870-423889 | None:intergenic | 35.0% | |
| AAGCTATTAAAAGAACACGC+TGG | + | chr8.4:426311-426330 | MS.gene43462:CDS | 35.0% | |
| AGCAATGCCAACTATTCAAA+TGG | + | chr8.4:426497-426516 | MS.gene43462:intron | 35.0% | |
| AGCTAATAGCTCAAGCAAAT+AGG | - | chr8.4:426983-427002 | None:intergenic | 35.0% | |
| AGCTATTAAAAGAACACGCT+GGG | + | chr8.4:426312-426331 | MS.gene43462:CDS | 35.0% | |
| AGTAAGTCATGCGATGAATT+TGG | - | chr8.4:427308-427327 | None:intergenic | 35.0% | |
| AGTTAAGAAGTGGAGTTACA+AGG | - | chr8.4:426141-426160 | None:intergenic | 35.0% | |
| ATGAAGCTTCGATCATTTGT+GGG | - | chr8.4:424722-424741 | None:intergenic | 35.0% | |
| ATGGATAAAACCAGTCATTG+CGG | + | chr8.4:427220-427239 | MS.gene43462:intron | 35.0% | |
| CAAAAGAGCTATCAATTTCC+AGG | + | chr8.4:423660-423679 | MS.gene43462:CDS | 35.0% | |
| CAACTGCTTTGTACTCATAT+TGG | - | chr8.4:423284-423303 | None:intergenic | 35.0% | |
| CACAGATAACTTACACTTCT+CGG | + | chr8.4:425345-425364 | MS.gene43462:intron | 35.0% | |
| CAGTGCTCTTGAAATTCTAA+TGG | - | chr8.4:425529-425548 | None:intergenic | 35.0% | |
| CATGGTATGTTGCTAATCAT+TGG | + | chr8.4:426361-426380 | MS.gene43462:intron | 35.0% | |
| CATTCAAAAGATCAGTGTCT+AGG | + | chr8.4:424528-424547 | MS.gene43462:intron | 35.0% | |
| CATTCTGCTTGGACAATTAA+GGG | - | chr8.4:427334-427353 | None:intergenic | 35.0% | |
| CGTGTAATCTTGATAGAGTA+GGG | - | chr8.4:427361-427380 | None:intergenic | 35.0% | |
| CTATGTACAACTCTGTATCA+CGG | + | chr8.4:424375-424394 | MS.gene43462:intron | 35.0% | |
| GAAACTTGTATCTAGTAAGG+AGG | - | chr8.4:426227-426246 | None:intergenic | 35.0% | |
| GATCAAAGAAGCTGTAGTAA+TGG | - | chr8.4:426840-426859 | None:intergenic | 35.0% | |
| GCACTATATACTTAGTTACC+TGG | - | chr8.4:423681-423700 | None:intergenic | 35.0% | |
| GCATACAAGGTTGTATGTAA+TGG | - | chr8.4:423379-423398 | None:intergenic | 35.0% | |
| GTAAACTTGGAAGCTCAAAA+GGG | - | chr8.4:425824-425843 | None:intergenic | 35.0% | |
| GTAAGTCATGCGATGAATTT+GGG | - | chr8.4:427307-427326 | None:intergenic | 35.0% | |
| GTAATTAGAAAAGGCTTCAC+AGG | + | chr8.4:424054-424073 | MS.gene43462:CDS | 35.0% | |
| GTCCAGAGTGTAATTAGAAA+AGG | + | chr8.4:424045-424064 | MS.gene43462:CDS | 35.0% | |
| GTTATTAAAAAAGAGGAGCG+AGG | - | chr8.4:426060-426079 | None:intergenic | 35.0% | |
| TAAACTTGGAAGCTCAAAAG+GGG | - | chr8.4:425823-425842 | None:intergenic | 35.0% | |
| TAACAAATGTTCTTTCCACC+AGG | - | chr8.4:425951-425970 | None:intergenic | 35.0% | |
| TAAGATGTGACATACATACC+AGG | - | chr8.4:423871-423890 | None:intergenic | 35.0% | |
| TAATTGAGTGGCATTAGCTA+TGG | - | chr8.4:424132-424151 | None:intergenic | 35.0% | |
| TACAAGTTTCAGTGTGTTGT+TGG | + | chr8.4:426237-426256 | MS.gene43462:intron | 35.0% | |
| TACTACAGCTTCTTTGATCA+AGG | + | chr8.4:426841-426860 | MS.gene43462:intron | 35.0% | |
| TAGATATAGTCCTCATTCAC+AGG | - | chr8.4:425093-425112 | None:intergenic | 35.0% | |
| TATGAAGCTTCGATCATTTG+TGG | - | chr8.4:424723-424742 | None:intergenic | 35.0% | |
| TCATTCTGCTTGGACAATTA+AGG | - | chr8.4:427335-427354 | None:intergenic | 35.0% | |
| TCCAGAACATGAATTTGAAC+AGG | - | chr8.4:423766-423785 | None:intergenic | 35.0% | |
| TCCTGTTCAAATTCATGTTC+TGG | + | chr8.4:423762-423781 | MS.gene43462:intron | 35.0% | |
| TCGTGTAATCTTGATAGAGT+AGG | - | chr8.4:427362-427381 | None:intergenic | 35.0% | |
| TCTTCAAAACCTTAATACCC+TGG | + | chr8.4:423850-423869 | MS.gene43462:CDS | 35.0% | |
| TGATCAGCCATTTGAATAGT+TGG | - | chr8.4:426507-426526 | None:intergenic | 35.0% | |
| TGTTCATTATCATTTGCAGG+CGG | + | chr8.4:426701-426720 | MS.gene43462:intron | 35.0% | |
| TGTTGCTAATCATTGGAGTT+TGG | + | chr8.4:426368-426387 | MS.gene43462:intron | 35.0% | |
| TGTTTAACCATGAAACAGGA+AGG | + | chr8.4:425249-425268 | MS.gene43462:intron | 35.0% | |
| TTAAAGTAGATTGAACTCCC+TGG | + | chr8.4:425374-425393 | MS.gene43462:intron | 35.0% | |
| TTGTTATAGGTTTGAGTGGT+CGG | - | chr8.4:424681-424700 | None:intergenic | 35.0% | |
| ! | ACATACATACCAGGGTATTA+AGG | - | chr8.4:423862-423881 | None:intergenic | 35.0% |
| ! | AGCCTTTTCTAATTACACTC+TGG | - | chr8.4:424050-424069 | None:intergenic | 35.0% |
| ! | ATGTATGGCTTGTATTTCTG+TGG | + | chr8.4:426812-426831 | MS.gene43462:intron | 35.0% |
| ! | CTTTTGAGCTTCCAAGTTTA+CGG | + | chr8.4:425823-425842 | MS.gene43462:intron | 35.0% |
| ! | GCATTGCTAGCCAATATTTT+TGG | - | chr8.4:426485-426504 | None:intergenic | 35.0% |
| ! | GCTCTTTTGTGAATATCAGT+AGG | - | chr8.4:423649-423668 | None:intergenic | 35.0% |
| ! | GTAGTTGGTATTACTGCTTT+GGG | + | chr8.4:426090-426109 | MS.gene43462:intron | 35.0% |
| ! | TAGTTGGTATTACTGCTTTG+GGG | + | chr8.4:426091-426110 | MS.gene43462:intron | 35.0% |
| ! | TGAGAAAAGTGTACATGTTG+AGG | - | chr8.4:425138-425157 | None:intergenic | 35.0% |
| ! | TGCATCCGATTTCAGATTTT+TGG | - | chr8.4:424592-424611 | None:intergenic | 35.0% |
| ! | TGTAGTTGGTATTACTGCTT+TGG | + | chr8.4:426089-426108 | MS.gene43462:intron | 35.0% |
| !! | CACTTTTTATCCTGTGAATG+AGG | + | chr8.4:425080-425099 | MS.gene43462:intron | 35.0% |
| !! | CTTCTATTGATTTCATCCAC+AGG | + | chr8.4:423796-423815 | MS.gene43462:intron | 35.0% |
| !! | GTTGTATGTAATGGGTTAGT+GGG | - | chr8.4:423370-423389 | None:intergenic | 35.0% |
| !! | TTCTTCACTTTTGGACCAAA+AGG | - | chr8.4:424268-424287 | None:intergenic | 35.0% |
| !!! | AGGGTATTAAGGTTTTGAAG+AGG | - | chr8.4:423851-423870 | None:intergenic | 35.0% |
| AAACTTGGAAGCTCAAAAGG+GGG | - | chr8.4:425822-425841 | None:intergenic | 40.0% | |
| AAAGGAGAGGATGTAAGGTT+TGG | - | chr8.4:426177-426196 | None:intergenic | 40.0% | |
| AAGGAGAGGATGTAAGGTTT+GGG | - | chr8.4:426176-426195 | None:intergenic | 40.0% | |
| AAGGGAGAACAATATCATCC+TGG | + | chr8.4:423312-423331 | MS.gene43462:CDS | 40.0% | |
| AATGCTGTTGTGCCTGAAAA+TGG | - | chr8.4:424565-424584 | None:intergenic | 40.0% | |
| ACTCATATTGGAGACCTTTG+AGG | - | chr8.4:423272-423291 | None:intergenic | 40.0% | |
| ACTCTGTATCACGGTATGTT+TGG | + | chr8.4:424384-424403 | MS.gene43462:intron | 40.0% | |
| AGAACAGGAACAAAACCAAC+AGG | - | chr8.4:423467-423486 | None:intergenic | 40.0% | |
| AGGACAGACAACAATTAGCA+GGG | + | chr8.4:424830-424849 | MS.gene43462:intron | 40.0% | |
| CAAGTCATCAGACAAACTGA+TGG | + | chr8.4:424646-424665 | MS.gene43462:intron | 40.0% | |
| CCCTGATGAAAAACTTCCAT+GGG | + | chr8.4:424023-424042 | MS.gene43462:CDS | 40.0% | |
| CGTAAACTTGGAAGCTCAAA+AGG | - | chr8.4:425825-425844 | None:intergenic | 40.0% | |
| CTCTGTATCACGGTATGTTT+GGG | + | chr8.4:424385-424404 | MS.gene43462:intron | 40.0% | |
| GAACAGGAACAAAACCAACA+GGG | - | chr8.4:423466-423485 | None:intergenic | 40.0% | |
| GACAACAGCGGATATATGTT+TGG | - | chr8.4:426941-426960 | None:intergenic | 40.0% | |
| GACATATGTGACCCACAATA+TGG | - | chr8.4:424450-424469 | None:intergenic | 40.0% | |
| GGTCCTGGATCAATTGTTAT+AGG | - | chr8.4:424694-424713 | None:intergenic | 40.0% | |
| GTCCAGTAGCCCAAAAATAT+TGG | + | chr8.4:426472-426491 | MS.gene43462:intron | 40.0% | |
| TAAGAAGTGGAGTTACAAGG+AGG | - | chr8.4:426138-426157 | None:intergenic | 40.0% | |
| TAGAAGCAGCATCTAACTGA+GGG | - | chr8.4:426740-426759 | None:intergenic | 40.0% | |
| TAGCAGGGTGAACTAAAAGT+TGG | + | chr8.4:424845-424864 | MS.gene43462:intron | 40.0% | |
| TAGCTCAAGCAAATAGGCAA+AGG | - | chr8.4:426977-426996 | None:intergenic | 40.0% | |
| TAGGACAGACAACAATTAGC+AGG | + | chr8.4:424829-424848 | MS.gene43462:intron | 40.0% | |
| TATGCATTGCTCGCAGTATT+TGG | + | chr8.4:423591-423610 | MS.gene43462:intron | 40.0% | |
| TCAACAGAAAGATACGCCTA+GGG | + | chr8.4:425155-425174 | MS.gene43462:intron | 40.0% | |
| TCTAAATGGCAGCACATGTA+TGG | - | chr8.4:425623-425642 | None:intergenic | 40.0% | |
| TGAACTCCCTGGTAAAACAA+GGG | + | chr8.4:425385-425404 | MS.gene43462:intron | 40.0% | |
| TGAATATCAGTAGGGAGCAA+AGG | - | chr8.4:423640-423659 | None:intergenic | 40.0% | |
| TGCACTCTAAACCCACAAAA+CGG | - | chr8.4:423941-423960 | None:intergenic | 40.0% | |
| TGTTATAGGTTTGAGTGGTC+GGG | - | chr8.4:424680-424699 | None:intergenic | 40.0% | |
| TTAGAAGCAGCATCTAACTG+AGG | - | chr8.4:426741-426760 | None:intergenic | 40.0% | |
| TTCCACTCTAGTGATTGCAT+GGG | + | chr8.4:424936-424955 | MS.gene43462:intron | 40.0% | |
| TTCCTCCTATACCATTGGAT+GGG | - | chr8.4:424621-424640 | None:intergenic | 40.0% | |
| TTGAACTCCCTGGTAAAACA+AGG | + | chr8.4:425384-425403 | MS.gene43462:intron | 40.0% | |
| TTGCTTTCCTCCTATACCAT+TGG | - | chr8.4:424626-424645 | None:intergenic | 40.0% | |
| TTGGAGTTGGACAAAACACA+AGG | - | chr8.4:426922-426941 | None:intergenic | 40.0% | |
| TTTCCACTCTAGTGATTGCA+TGG | + | chr8.4:424935-424954 | MS.gene43462:intron | 40.0% | |
| TTTCCTCCTATACCATTGGA+TGG | - | chr8.4:424622-424641 | None:intergenic | 40.0% | |
| ! | AAAGGAAGCAACCGTTTTGT+GGG | + | chr8.4:423927-423946 | MS.gene43462:intron | 40.0% |
| ! | AAAGGCATAGTTTGTATCCC+TGG | + | chr8.4:425930-425949 | MS.gene43462:intron | 40.0% |
| ! | ACCCATGGAAGTTTTTCATC+AGG | - | chr8.4:424027-424046 | None:intergenic | 40.0% |
| ! | AGCGGATATATGTTTGGAGT+TGG | - | chr8.4:426935-426954 | None:intergenic | 40.0% |
| ! | AGTTGGTATTACTGCTTTGG+GGG | + | chr8.4:426092-426111 | MS.gene43462:intron | 40.0% |
| ! | ATTTGTTAGCTGCAACACTC+GGG | + | chr8.4:425963-425982 | MS.gene43462:intron | 40.0% |
| ! | CATTTGTTAGCTGCAACACT+CGG | + | chr8.4:425962-425981 | MS.gene43462:intron | 40.0% |
| ! | CCCATGGAAGTTTTTCATCA+GGG | - | chr8.4:424026-424045 | None:intergenic | 40.0% |
| ! | TAAAGGAAGCAACCGTTTTG+TGG | + | chr8.4:423926-423945 | MS.gene43462:intron | 40.0% |
| ! | TACTGGAGACGAAGTTTTCA+TGG | + | chr8.4:426343-426362 | MS.gene43462:CDS | 40.0% |
| ! | TATCATCCTGGTTAGTTCGT+TGG | + | chr8.4:423324-423343 | MS.gene43462:intron | 40.0% |
| ! | TCATGGAAATTTAAGGCCCT+AGG | - | chr8.4:425174-425193 | None:intergenic | 40.0% |
| ! | TGAGGACTATATCTAGAGCA+CGG | + | chr8.4:425098-425117 | MS.gene43462:intron | 40.0% |
| ! | TGGCCCATGTTTTACCTATT+TGG | - | chr8.4:425717-425736 | None:intergenic | 40.0% |
| ! | TTGACTATCTTTTGCCAGAG+TGG | + | chr8.4:425988-426007 | MS.gene43462:intron | 40.0% |
| !! | GCGATCATTAACTTTGGAGT+TGG | - | chr8.4:426587-426606 | None:intergenic | 40.0% |
| !! | GGTTGTATGTAATGGGTTAG+TGG | - | chr8.4:423371-423390 | None:intergenic | 40.0% |
| !!! | AGCCAATATTTTTGGGCTAC+TGG | - | chr8.4:426477-426496 | None:intergenic | 40.0% |
| AGAAGCAGCATCTAACTGAG+GGG | - | chr8.4:426739-426758 | None:intergenic | 45.0% | |
| AGAGGATGTAAGGTTTGGGT+TGG | - | chr8.4:426172-426191 | None:intergenic | 45.0% | |
| AGCTTCGATCATTTGTGGGT+TGG | - | chr8.4:424718-424737 | None:intergenic | 45.0% | |
| AGTAGGGAACTCATTCTGCT+TGG | - | chr8.4:427345-427364 | None:intergenic | 45.0% | |
| ATTATGCGATCCCAGCATTC+CGG | + | chr8.4:427387-427406 | MS.gene43462:CDS | 45.0% | |
| CCAGTAAAGGAGAGGATGTA+AGG | - | chr8.4:426182-426201 | None:intergenic | 45.0% | |
| CCTTACATCCTCTCCTTTAC+TGG | + | chr8.4:426179-426198 | MS.gene43462:intron | 45.0% | |
| CGAATTGCTCTCAACCTCAA+AGG | + | chr8.4:423255-423274 | MS.gene43462:CDS | 45.0% | |
| CTAATTACACTCTGGACCCA+TGG | - | chr8.4:424042-424061 | None:intergenic | 45.0% | |
| CTCAACAGAAAGATACGCCT+AGG | + | chr8.4:425154-425173 | MS.gene43462:intron | 45.0% | |
| GAAACAATACTGACAGCCTG+TGG | - | chr8.4:423815-423834 | None:intergenic | 45.0% | |
| GAAGTTCTCCTCCGTAAACT+TGG | - | chr8.4:425837-425856 | None:intergenic | 45.0% | |
| GCCCTGATGAAAAACTTCCA+TGG | + | chr8.4:424022-424041 | MS.gene43462:CDS | 45.0% | |
| GGGGTAGAGAAGTTAAGAAG+TGG | - | chr8.4:426151-426170 | None:intergenic | 45.0% | |
| GGTTGAGAGCAATTCGAACT+CGG | - | chr8.4:423251-423270 | None:intergenic | 45.0% | |
| GTGGGCAAGGAAAAAAAGAG+AGG | - | chr8.4:423352-423371 | None:intergenic | 45.0% | |
| TACCCATGCAATCACTAGAG+TGG | - | chr8.4:424941-424960 | None:intergenic | 45.0% | |
| TCAAGCAAATAGGCAAAGGC+CGG | - | chr8.4:426973-426992 | None:intergenic | 45.0% | |
| TTGAGCTTCCAAGTTTACGG+AGG | + | chr8.4:425826-425845 | MS.gene43462:intron | 45.0% | |
| TTTCTCAAGCTCAACCCTGT+TGG | + | chr8.4:423449-423468 | MS.gene43462:CDS | 45.0% | |
| TTTGAGAGTTCCGCAATGAC+TGG | - | chr8.4:427233-427252 | None:intergenic | 45.0% | |
| TTTGTTCCTGTTCTCGTCGA+TGG | + | chr8.4:423473-423492 | MS.gene43462:CDS | 45.0% | |
| ! | ACGGTATGTTTGGGATGTCT+AGG | + | chr8.4:424394-424413 | MS.gene43462:intron | 45.0% |
| ! | GAGGATGTAAGGTTTGGGTT+GGG | - | chr8.4:426171-426190 | None:intergenic | 45.0% |
| ! | TTGTGAGCTCATTGACTGAC+TGG | - | chr8.4:425737-425756 | None:intergenic | 45.0% |
| !! | AGGATGTAAGGTTTGGGTTG+GGG | - | chr8.4:426170-426189 | None:intergenic | 45.0% |
| !! | ATGTAATGGGTTAGTGGGCA+AGG | - | chr8.4:423365-423384 | None:intergenic | 45.0% |
| !! | TTCGATCATTTGTGGGTTGG+TGG | - | chr8.4:424715-424734 | None:intergenic | 45.0% |
| !!! | TCACGTCCCTTGTTTTACCA+GGG | - | chr8.4:425394-425413 | None:intergenic | 45.0% |
| !!! | TTCACGTCCCTTGTTTTACC+AGG | - | chr8.4:425395-425414 | None:intergenic | 45.0% |
| ACTCGCCCATCCAATGGTAT+AGG | + | chr8.4:424613-424632 | MS.gene43462:intron | 50.0% | |
| ATGCAAACTCGCCCATCCAA+TGG | + | chr8.4:424607-424626 | MS.gene43462:intron | 50.0% | |
| CGCTGTTGTCTAAATGCCTC+CGG | + | chr8.4:426951-426970 | MS.gene43462:intron | 50.0% | |
| GAGAATCAACCAGATGCAGC+AGG | + | chr8.4:427422-427441 | MS.gene43462:CDS | 50.0% | |
| GAGAGCAATTCGAACTCGGA+AGG | - | chr8.4:423247-423266 | None:intergenic | 50.0% | |
| GAGGAACCAACGAACTAACC+AGG | - | chr8.4:423333-423352 | None:intergenic | 50.0% | |
| GCATTGCTCGCAGTATTTGG+AGG | + | chr8.4:423594-423613 | MS.gene43462:intron | 50.0% | |
| GGGAGCAAAGGATGTTGTTG+AGG | - | chr8.4:423628-423647 | None:intergenic | 50.0% | |
| TTATGCGATCCCAGCATTCC+GGG | + | chr8.4:427388-427407 | MS.gene43462:CDS | 50.0% | |
| ! | GCTGCATCTGGTTGATTCTC+TGG | - | chr8.4:427422-427441 | None:intergenic | 50.0% |
| ! | GGCATAGTTTGTATCCCTGG+TGG | + | chr8.4:425933-425952 | MS.gene43462:intron | 50.0% |
| ! | GGCTACTGGACCCTTTTGAA+AGG | - | chr8.4:426463-426482 | None:intergenic | 50.0% |
| ! | TCTAGAGCACGGTAACAGAC+TGG | + | chr8.4:425109-425128 | MS.gene43462:intron | 50.0% |
| !! | CAAAAGGGGGTGACGGAATT+CGG | - | chr8.4:425809-425828 | None:intergenic | 50.0% |
| !! | CGGAGGCATTTAGACAACAG+CGG | - | chr8.4:426953-426972 | None:intergenic | 50.0% |
| !! | GGTATTACTGCTTTGGGGGT+GGG | + | chr8.4:426096-426115 | MS.gene43462:intron | 50.0% |
| !! | GTATTACTGCTTTGGGGGTG+GGG | + | chr8.4:426097-426116 | MS.gene43462:intron | 50.0% |
| !! | TATTACTGCTTTGGGGGTGG+GGG | + | chr8.4:426098-426117 | MS.gene43462:intron | 50.0% |
| !! | TGGTATTACTGCTTTGGGGG+TGG | + | chr8.4:426095-426114 | MS.gene43462:intron | 50.0% |
| AGCAAATAGGCAAAGGCCGG+AGG | - | chr8.4:426970-426989 | None:intergenic | 55.0% | |
| CACGCTGGGAGATATGCTAC+TGG | + | chr8.4:426326-426345 | MS.gene43462:CDS | 55.0% | |
| CGCCCATCCAATGGTATAGG+AGG | + | chr8.4:424616-424635 | MS.gene43462:intron | 55.0% | |
| CTTCACCAACAGCCAACGAG+TGG | - | chr8.4:427177-427196 | None:intergenic | 55.0% | |
| GATTCTCTGGCAACGTCTCC+CGG | - | chr8.4:427409-427428 | None:intergenic | 55.0% | |
| GGAAGCTCAAAAGGGGGTGA+CGG | - | chr8.4:425816-425835 | None:intergenic | 55.0% | |
| ! | CACTCGTTGGCTGTTGGTGA+AGG | + | chr8.4:427175-427194 | MS.gene43462:intron | 55.0% |
| !! | ATTACTGCTTTGGGGGTGGG+GGG | + | chr8.4:426099-426118 | MS.gene43462:intron | 55.0% |
| !! | CATTTGTGGGTTGGTGGTCC+TGG | - | chr8.4:424709-424728 | None:intergenic | 55.0% |
| !! | GGGTGACGGAATTCGGATCA+CGG | - | chr8.4:425802-425821 | None:intergenic | 55.0% |
| !! | GGTGACGGAATTCGGATCAC+GGG | - | chr8.4:425801-425820 | None:intergenic | 55.0% |
| CAACAGCCAACGAGTGGTGC+AGG | - | chr8.4:427171-427190 | None:intergenic | 60.0% | |
| CTCAGGTAGCCTGCTGCATC+TGG | - | chr8.4:427434-427453 | None:intergenic | 60.0% | |
| GCAACGTCTCCCGGAATGCT+GGG | - | chr8.4:427400-427419 | None:intergenic | 60.0% | |
| TGCTTGCCTGCACCACTCGT+TGG | + | chr8.4:427162-427181 | MS.gene43462:intron | 60.0% | |
| ! | CTGCACCACTCGTTGGCTGT+TGG | + | chr8.4:427169-427188 | MS.gene43462:intron | 60.0% |
| GCAGGGCCATCGACGAGAAC+AGG | - | chr8.4:423482-423501 | None:intergenic | 65.0% | |
| GGCAACGTCTCCCGGAATGC+TGG | - | chr8.4:427401-427420 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 423087 | 427460 | 423087 | ID=MS.gene43462 |
| chr8.4 | mRNA | 423087 | 427460 | 423087 | ID=MS.gene43462.t1;Parent=MS.gene43462 |
| chr8.4 | exon | 423087 | 423089 | 423087 | ID=MS.gene43462.t1.exon1;Parent=MS.gene43462.t1 |
| chr8.4 | CDS | 423087 | 423089 | 423087 | ID=cds.MS.gene43462.t1;Parent=MS.gene43462.t1 |
| chr8.4 | exon | 423159 | 423333 | 423159 | ID=MS.gene43462.t1.exon2;Parent=MS.gene43462.t1 |
| chr8.4 | CDS | 423159 | 423333 | 423159 | ID=cds.MS.gene43462.t1;Parent=MS.gene43462.t1 |
| chr8.4 | exon | 423447 | 423532 | 423447 | ID=MS.gene43462.t1.exon3;Parent=MS.gene43462.t1 |
| chr8.4 | CDS | 423447 | 423532 | 423447 | ID=cds.MS.gene43462.t1;Parent=MS.gene43462.t1 |
| chr8.4 | exon | 423607 | 423681 | 423607 | ID=MS.gene43462.t1.exon4;Parent=MS.gene43462.t1 |
| chr8.4 | CDS | 423607 | 423681 | 423607 | ID=cds.MS.gene43462.t1;Parent=MS.gene43462.t1 |
| chr8.4 | exon | 423818 | 423871 | 423818 | ID=MS.gene43462.t1.exon5;Parent=MS.gene43462.t1 |
| chr8.4 | CDS | 423818 | 423871 | 423818 | ID=cds.MS.gene43462.t1;Parent=MS.gene43462.t1 |
| chr8.4 | exon | 424000 | 424075 | 424000 | ID=MS.gene43462.t1.exon6;Parent=MS.gene43462.t1 |
| chr8.4 | CDS | 424000 | 424075 | 424000 | ID=cds.MS.gene43462.t1;Parent=MS.gene43462.t1 |
| chr8.4 | exon | 426303 | 426364 | 426303 | ID=MS.gene43462.t1.exon7;Parent=MS.gene43462.t1 |
| chr8.4 | CDS | 426303 | 426364 | 426303 | ID=cds.MS.gene43462.t1;Parent=MS.gene43462.t1 |
| chr8.4 | exon | 426720 | 426779 | 426720 | ID=MS.gene43462.t1.exon8;Parent=MS.gene43462.t1 |
| chr8.4 | CDS | 426720 | 426779 | 426720 | ID=cds.MS.gene43462.t1;Parent=MS.gene43462.t1 |
| chr8.4 | exon | 427350 | 427460 | 427350 | ID=MS.gene43462.t1.exon9;Parent=MS.gene43462.t1 |
| chr8.4 | CDS | 427350 | 427460 | 427350 | ID=cds.MS.gene43462.t1;Parent=MS.gene43462.t1 |
| Gene Sequence |
| Protein sequence |
