AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068681

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068681.t1 MTR_2g070180 91.176 204 18 0 1 204 1 204 2.22e-138 385
MS.gene068681.t1 MTR_2g070150 88.235 204 24 0 1 204 1 204 6.57e-137 381
MS.gene068681.t1 MTR_2g070140 86.170 188 26 0 17 204 1 188 1.91e-123 347
MS.gene068681.t1 MTR_2g070130 78.922 204 43 0 1 204 1 204 4.67e-123 347
MS.gene068681.t1 MTR_2g070210 76.214 206 47 1 1 204 1 206 1.88e-117 333
MS.gene068681.t1 MTR_2g070200 70.388 206 59 2 1 204 1 206 7.05e-108 308
MS.gene068681.t1 MTR_2g070060 65.686 204 70 0 1 204 1 204 1.62e-103 297
MS.gene068681.t1 MTR_3g467420 64.000 200 72 0 5 204 10 209 9.55e-98 283
MS.gene068681.t1 MTR_2g070070 65.196 204 71 0 1 204 1 204 2.18e-97 282
MS.gene068681.t1 MTR_3g467430 61.881 202 77 0 3 204 8 209 1.21e-93 273
MS.gene068681.t1 MTR_2g070110 62.745 204 75 1 1 204 1 203 7.35e-92 268
MS.gene068681.t1 MTR_8g056940 63.366 202 74 0 1 202 1 202 1.51e-90 265
MS.gene068681.t1 MTR_2g070120 61.275 204 79 0 1 204 1 204 2.24e-90 264
MS.gene068681.t1 MTR_4g124130 59.113 203 82 1 1 202 1 203 2.20e-85 251
MS.gene068681.t1 MTR_5g076900 51.471 204 97 2 2 204 4 206 2.05e-72 219
MS.gene068681.t1 MTR_0186s0030 67.376 141 46 0 1 141 1 141 1.95e-62 191
MS.gene068681.t1 MTR_1g090060 42.927 205 112 3 4 204 3 206 2.15e-49 160
MS.gene068681.t1 MTR_3g099757 40.686 204 118 2 3 204 4 206 1.76e-47 155
MS.gene068681.t1 MTR_5g037380 41.981 212 114 5 2 204 3 214 2.10e-47 155
MS.gene068681.t1 MTR_8g087425 40.000 205 120 2 2 204 3 206 3.22e-47 155
MS.gene068681.t1 MTR_5g040430 35.714 210 128 2 2 204 5 214 7.98e-47 154
MS.gene068681.t1 MTR_7g065720 40.000 205 117 4 3 203 6 208 2.29e-45 150
MS.gene068681.t1 MTR_8g087410 40.887 203 117 2 4 204 6 207 8.85e-45 148
MS.gene068681.t1 MTR_4g019780 40.488 205 117 4 3 204 7 209 1.13e-44 148
MS.gene068681.t1 MTR_1g090100 43.137 204 111 3 5 204 3 205 2.60e-44 147
MS.gene068681.t1 MTR_7g065630 39.024 205 116 5 3 204 24 222 3.07e-44 147
MS.gene068681.t1 MTR_4g059730 40.385 208 119 3 1 204 1 207 3.76e-44 147
MS.gene068681.t1 MTR_7g065740 40.488 205 116 4 3 203 6 208 1.16e-43 145
MS.gene068681.t1 MTR_7g065750 40.976 205 115 5 3 203 6 208 1.69e-43 145
MS.gene068681.t1 MTR_7g065660 38.725 204 120 4 3 203 6 207 6.41e-43 144
MS.gene068681.t1 MTR_7g065270 39.216 204 119 5 3 203 6 207 7.02e-43 144
MS.gene068681.t1 MTR_7g065590 37.745 204 122 4 3 203 6 207 9.50e-43 143
MS.gene068681.t1 MTR_4g019790 40.394 203 116 5 4 203 7 207 1.24e-42 143
MS.gene068681.t1 MTR_1g090070 39.614 207 117 5 4 204 9 213 1.75e-42 142
MS.gene068681.t1 MTR_7g065710 38.537 205 121 5 1 204 1 201 6.67e-42 141
MS.gene068681.t1 MTR_6g080440 40.212 189 108 4 18 203 17 203 7.43e-42 141
MS.gene068681.t1 MTR_7g065265 39.706 204 118 5 3 203 6 207 8.79e-42 140
MS.gene068681.t1 MTR_7g065290 39.216 204 119 5 3 203 6 207 5.69e-41 139
MS.gene068681.t1 MTR_7g065230 39.409 203 115 5 3 203 6 202 6.86e-41 138
MS.gene068681.t1 MTR_1g090150 38.537 205 120 5 3 203 2 204 9.16e-41 138
MS.gene068681.t1 MTR_1g090090 40.976 205 116 4 4 204 3 206 1.32e-39 135
MS.gene068681.t1 MTR_7g065600 37.255 204 123 4 3 203 6 207 1.36e-39 135
MS.gene068681.t1 MTR_8g061950 35.545 211 127 3 3 204 4 214 1.67e-39 135
MS.gene068681.t1 MTR_7g065700 39.512 205 119 5 1 204 4 204 7.54e-39 133
MS.gene068681.t1 MTR_7g065680 38.537 205 117 5 3 204 6 204 1.80e-38 132
MS.gene068681.t1 MTR_1g115195 37.915 211 120 5 1 204 1 207 2.71e-38 132
MS.gene068681.t1 MTR_7g065260 38.308 201 119 5 3 200 13 211 8.34e-36 125
MS.gene068681.t1 MTR_7g065640 42.657 143 80 2 3 144 6 147 1.36e-33 119
MS.gene068681.t1 MTR_2g072120 62.162 74 27 1 47 119 1 74 3.32e-29 104
MS.gene068681.t1 MTR_4g134370 30.286 175 95 5 4 159 15 181 4.04e-16 74.3
MS.gene068681.t1 MTR_4g134380 30.000 170 102 5 4 159 15 181 2.48e-15 72.0
MS.gene068681.t1 MTR_4g134380 29.878 164 98 5 4 153 15 175 3.29e-14 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068681.t1 AT1G78380 67.647 204 66 0 1 204 1 204 3.99e-104 299
MS.gene068681.t1 AT1G17180 64.706 204 72 0 1 204 1 204 1.44e-102 295
MS.gene068681.t1 AT1G78370 65.686 204 70 0 1 204 1 204 1.33e-100 290
MS.gene068681.t1 AT1G78340 63.725 204 74 0 1 204 1 204 4.43e-99 286
MS.gene068681.t1 AT1G78360 64.390 205 72 1 1 204 1 205 2.58e-97 282
MS.gene068681.t1 AT1G78320 63.725 204 74 0 1 204 1 204 3.66e-97 281
MS.gene068681.t1 AT1G17170 62.745 204 75 1 1 204 1 203 1.15e-96 280
MS.gene068681.t1 AT1G17190 58.911 202 83 0 3 204 4 205 3.94e-89 261
MS.gene068681.t1 AT1G53680 54.412 204 91 2 3 204 6 209 6.72e-83 245
MS.gene068681.t1 AT3G43800 57.143 203 83 3 3 201 4 206 1.20e-79 237
MS.gene068681.t1 AT1G78320 54.902 204 65 1 1 204 1 177 1.41e-76 228
MS.gene068681.t1 AT2G29420 40.488 205 119 3 2 204 7 210 9.33e-52 166
MS.gene068681.t1 AT3G09270 41.748 206 115 4 3 204 5 209 9.30e-51 164
MS.gene068681.t1 AT2G29440 42.233 206 113 4 3 204 5 208 8.47e-48 156
MS.gene068681.t1 AT2G29450 42.512 207 112 5 3 204 5 209 1.62e-47 155
MS.gene068681.t1 AT2G29460 39.320 206 119 4 3 204 6 209 5.62e-47 154
MS.gene068681.t1 AT2G29490 38.350 206 121 4 3 204 6 209 3.39e-46 152
MS.gene068681.t1 AT2G29480 37.864 206 122 4 3 204 6 209 8.41e-45 149
MS.gene068681.t1 AT2G29470 38.537 205 119 5 5 204 8 210 2.09e-43 145
MS.gene068681.t1 AT1G10360 39.810 211 119 4 2 204 3 213 4.04e-43 144
MS.gene068681.t1 AT1G59700 39.623 212 117 5 3 204 5 215 4.20e-42 142
MS.gene068681.t1 AT1G59670 41.038 212 114 5 3 204 5 215 4.79e-41 139
MS.gene068681.t1 AT1G10370 38.073 218 113 4 2 204 3 213 4.89e-41 139
MS.gene068681.t1 AT1G74590 36.735 196 118 3 3 192 6 201 1.81e-40 137
MS.gene068681.t1 AT1G27130 37.681 207 120 4 3 200 5 211 4.44e-39 134
MS.gene068681.t1 AT1G27140 39.423 208 116 4 3 200 5 212 1.42e-38 133
MS.gene068681.t1 AT1G69930 36.715 207 124 3 5 204 13 219 8.31e-38 131
MS.gene068681.t1 AT5G62480 35.533 197 117 3 1 187 5 201 3.10e-37 129
MS.gene068681.t1 AT1G69920 37.143 210 113 6 5 200 35 239 1.06e-36 129
MS.gene068681.t1 AT5G62480 28.934 197 104 4 1 187 5 175 7.43e-22 89.4
MS.gene068681.t1 AT5G62480 28.934 197 103 4 1 187 5 174 8.25e-22 89.0

Find 48 sgRNAs with CRISPR-Local

Find 81 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGGAGACAAGATTTATTA+TGG 0.217785 2.2:+21610300 MS.gene068681:CDS
AGTACAGAGAAGAAGATTTA+AGG 0.220231 2.2:+21609249 MS.gene068681:CDS
TTCAGTATATTGATGAAGTT+TGG 0.281776 2.2:+21609369 MS.gene068681:CDS
CAAATTGTTGGAGCAAGAAT+TGG 0.293479 2.2:+21610281 MS.gene068681:CDS
GACATCTATGAATTCTTTCT+TGG 0.300485 2.2:-21610256 None:intergenic
AGAGATCACAAGCTTTATTC+TGG 0.309999 2.2:+21609429 MS.gene068681:CDS
AAGGAACCTTTGGGCCAAAA+AGG 0.311321 2.2:+21610215 MS.gene068681:CDS
AAGTGATTCTGCTAGATTAC+TGG 0.343179 2.2:+21609168 MS.gene068681:CDS
CTCAATCTGCATACATCTAT+TGG 0.351203 2.2:-21610442 None:intergenic
TTGACGTTGGAAGGAACCTT+TGG 0.357525 2.2:+21610205 MS.gene068681:CDS
ATTCTTGCTCCAACAATTTG+TGG 0.381385 2.2:-21610278 None:intergenic
GTCCATTTGGCATGAGGGTC+AGG 0.391813 2.2:+21609195 MS.gene068681:CDS
CAGGATAGCCTTAGCTGAAA+AGG 0.397232 2.2:+21609214 MS.gene068681:CDS
TTACCATTATGAATGAGAAC+AGG 0.399293 2.2:-21609320 None:intergenic
CATAGATGTCCACAAATTGT+TGG 0.405958 2.2:+21610269 MS.gene068681:CDS
TTTAAAAGTTATGAAACCTT+TGG 0.418179 2.2:+21610375 MS.gene068681:CDS
TTCAAAGTCTCTTCCTGATC+AGG 0.420326 2.2:+21610470 MS.gene068681:CDS
ATCCCTGTTCTCATTCATAA+TGG 0.420755 2.2:+21609317 MS.gene068681:CDS
CACTTATTCCATACTACACT+TGG 0.423079 2.2:+21610352 MS.gene068681:CDS
GATTACTGGGCAAGTCCATT+TGG 0.423782 2.2:+21609182 MS.gene068681:CDS
TTGGCCCAAGCAATGAGCTT+AGG 0.442341 2.2:-21610423 None:intergenic
TCATGGACCTTATCCTGATC+AGG 0.451856 2.2:-21610483 None:intergenic
AATAGATATTTGACGTTGGA+AGG 0.456845 2.2:+21610196 MS.gene068681:intron
GTCTCTTCCTGATCAGGATA+AGG 0.461296 2.2:+21610476 MS.gene068681:CDS
GAGATCACAAGCTTTATTCT+GGG 0.461699 2.2:+21609430 MS.gene068681:CDS
AGCAATTAAAGATTCACAAA+TGG 0.462314 2.2:-21609345 None:intergenic
TGGCCCAAGCAATGAGCTTA+GGG 0.466955 2.2:-21610422 None:intergenic
TGACGTTGGAAGGAACCTTT+GGG 0.469728 2.2:+21610206 MS.gene068681:CDS
AAAGCTTGTGATCTCTGATA+AGG 0.470385 2.2:-21609422 None:intergenic
AAATTGTTGGAGCAAGAATT+GGG 0.479522 2.2:+21610282 MS.gene068681:CDS
ATGCCCTAAGCTCATTGCTT+GGG 0.492777 2.2:+21610419 MS.gene068681:CDS
TATTATGGAGGAGATAAGCT+TGG 0.494984 2.2:+21610315 MS.gene068681:CDS
AATGCCCTAAGCTCATTGCT+TGG 0.497551 2.2:+21610418 MS.gene068681:CDS
ATCCTGACCCTCATGCCAAA+TGG 0.499562 2.2:-21609197 None:intergenic
GGCTGATTATGTTGATAAGA+AGG 0.507102 2.2:+21609451 MS.gene068681:CDS
CTCTAGACTGATCTTACCAA+AGG 0.536129 2.2:-21610391 None:intergenic
AGGATAGCCTTAGCTGAAAA+GGG 0.536471 2.2:+21609215 MS.gene068681:CDS
GGCAAGTCCATTTGGCATGA+GGG 0.542919 2.2:+21609190 MS.gene068681:CDS
GGTTCATTTGAAGCAACAAA+GGG 0.546074 2.2:-21609280 None:intergenic
AGTGATTCTGCTAGATTACT+GGG 0.559493 2.2:+21609169 MS.gene068681:CDS
GGAGACAAGATTTATTATGG+AGG 0.562855 2.2:+21610303 MS.gene068681:CDS
GGGTTCATTTGAAGCAACAA+AGG 0.566373 2.2:-21609281 None:intergenic
GGCAAATAGATATTTGACGT+TGG 0.578893 2.2:+21610192 MS.gene068681:intron
CAGAATCACTTCATCAGCCA+TGG 0.584359 2.2:-21609156 None:intergenic
GGGCAAGTCCATTTGGCATG+AGG 0.587485 2.2:+21609189 MS.gene068681:CDS
GATCTCTGATAAGGATCAGA+AGG 0.596783 2.2:-21609413 None:intergenic
TACCATTATGAATGAGAACA+GGG 0.606854 2.2:-21609319 None:intergenic
TAAGGATCAGAAGGCAACAA+AGG 0.613337 2.2:-21609404 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTATAAAATTAGCTTATAT+TGG + chr2.2:21609599-21609618 MS.gene068681:intron 15.0%
!! GTATTAATTAGAGTTATAAC+TGG + chr2.2:21610028-21610047 MS.gene068681:intron 20.0%
!! TAAGCTATTTGTAAAAACTA+GGG + chr2.2:21609672-21609691 MS.gene068681:intron 20.0%
!! TACACATTTCATTCATATTA+AGG - chr2.2:21609698-21609717 None:intergenic 20.0%
!! TGAAATGAGTCAAAAAAATT+TGG + chr2.2:21610080-21610099 MS.gene068681:intron 20.0%
!! TTAAGCTATTTGTAAAAACT+AGG + chr2.2:21609671-21609690 MS.gene068681:intron 20.0%
!! TTTAAAAGTTATGAAACCTT+TGG + chr2.2:21610375-21610394 MS.gene068681:CDS 20.0%
!!! ATTTTGCATTTATGATAAGA+AGG - chr2.2:21609977-21609996 None:intergenic 20.0%
!!! GAAGATAAAATAAAGTTGAT+AGG - chr2.2:21609568-21609587 None:intergenic 20.0%
!!! TGATAAGAAGGTATATAAAT+TGG + chr2.2:21609463-21609482 MS.gene068681:intron 20.0%
! AACAAAATGATCAGTTAAAG+TGG - chr2.2:21609843-21609862 None:intergenic 25.0%
! ACAAAATGATCAGTTAAAGT+GGG - chr2.2:21609842-21609861 None:intergenic 25.0%
! AGCAATTAAAGATTCACAAA+TGG - chr2.2:21609348-21609367 None:intergenic 25.0%
! ATGTGTATGTCAATAATTTG+AGG + chr2.2:21609711-21609730 MS.gene068681:intron 25.0%
! TGTGTATGTCAATAATTTGA+GGG + chr2.2:21609712-21609731 MS.gene068681:intron 25.0%
! TTAACTGTCTTGTAAAGTAT+TGG + chr2.2:21609917-21609936 MS.gene068681:intron 25.0%
! TTCAGTATATTGATGAAGTT+TGG + chr2.2:21609369-21609388 MS.gene068681:CDS 25.0%
AAATTGTTGGAGCAAGAATT+GGG + chr2.2:21610282-21610301 MS.gene068681:CDS 30.0%
AATAGATATTTGACGTTGGA+AGG + chr2.2:21610196-21610215 MS.gene068681:intron 30.0%
ACAAATGACTCAGTTGTTAA+AGG + chr2.2:21610116-21610135 MS.gene068681:intron 30.0%
AGTACAGAGAAGAAGATTTA+AGG + chr2.2:21609249-21609268 MS.gene068681:CDS 30.0%
CGAATATTTATCATCATGCA+TGG + chr2.2:21609755-21609774 MS.gene068681:intron 30.0%
GACATCTATGAATTCTTTCT+TGG - chr2.2:21610259-21610278 None:intergenic 30.0%
GTGTATGTCAATAATTTGAG+GGG + chr2.2:21609713-21609732 MS.gene068681:intron 30.0%
TACCATTATGAATGAGAACA+GGG - chr2.2:21609322-21609341 None:intergenic 30.0%
TTACCATTATGAATGAGAAC+AGG - chr2.2:21609323-21609342 None:intergenic 30.0%
TTGGGAGACAAGATTTATTA+TGG + chr2.2:21610300-21610319 MS.gene068681:CDS 30.0%
! ACAGGGATTTTCTTGTAAAT+AGG - chr2.2:21609305-21609324 None:intergenic 30.0%
! CAGGGATTTTCTTGTAAATA+GGG - chr2.2:21609304-21609323 None:intergenic 30.0%
! CTTTTAAACCAAGTGTAGTA+TGG - chr2.2:21610363-21610382 None:intergenic 30.0%
! TATTGGCAAGTATTAGTTCT+TGG + chr2.2:21609784-21609803 MS.gene068681:intron 30.0%
! TCCTCCTTCAAAAAAAGTAT+TGG + chr2.2:21609945-21609964 MS.gene068681:intron 30.0%
!!! ACCAATACTTTTTTTGAAGG+AGG - chr2.2:21609949-21609968 None:intergenic 30.0%
!!! TGCACCAATACTTTTTTTGA+AGG - chr2.2:21609952-21609971 None:intergenic 30.0%
AAAGCTTGTGATCTCTGATA+AGG - chr2.2:21609425-21609444 None:intergenic 35.0%
AAGTGATTCTGCTAGATTAC+TGG + chr2.2:21609168-21609187 MS.gene068681:CDS 35.0%
AAGTGTGTGTCAATTCTCAA+TGG + chr2.2:21610171-21610190 MS.gene068681:intron 35.0%
AATGATCAGTTAAAGTGGGA+CGG - chr2.2:21609838-21609857 None:intergenic 35.0%
AGTGATTCTGCTAGATTACT+GGG + chr2.2:21609169-21609188 MS.gene068681:CDS 35.0%
ATCATGCATGGTCACTATAT+TGG + chr2.2:21609767-21609786 MS.gene068681:intron 35.0%
ATCCCTGTTCTCATTCATAA+TGG + chr2.2:21609317-21609336 MS.gene068681:CDS 35.0%
ATTCTTGCTCCAACAATTTG+TGG - chr2.2:21610281-21610300 None:intergenic 35.0%
CAAATTGTTGGAGCAAGAAT+TGG + chr2.2:21610281-21610300 MS.gene068681:CDS 35.0%
CACTTATTCCATACTACACT+TGG + chr2.2:21610352-21610371 MS.gene068681:CDS 35.0%
CATAGATGTCCACAAATTGT+TGG + chr2.2:21610269-21610288 MS.gene068681:CDS 35.0%
CTCAATCTGCATACATCTAT+TGG - chr2.2:21610445-21610464 None:intergenic 35.0%
GGAGACAAGATTTATTATGG+AGG + chr2.2:21610303-21610322 MS.gene068681:CDS 35.0%
GGCAAATAGATATTTGACGT+TGG + chr2.2:21610192-21610211 MS.gene068681:intron 35.0%
TATTATGGAGGAGATAAGCT+TGG + chr2.2:21610315-21610334 MS.gene068681:CDS 35.0%
! GGCTGATTATGTTGATAAGA+AGG + chr2.2:21609451-21609470 MS.gene068681:CDS 35.0%
! GGTTCATTTGAAGCAACAAA+GGG - chr2.2:21609283-21609302 None:intergenic 35.0%
! TTTGATACCCTTTTCAGCTA+AGG - chr2.2:21609225-21609244 None:intergenic 35.0%
!! AGAGATCACAAGCTTTATTC+TGG + chr2.2:21609429-21609448 MS.gene068681:CDS 35.0%
!! GAGATCACAAGCTTTATTCT+GGG + chr2.2:21609430-21609449 MS.gene068681:CDS 35.0%
CTCTAGACTGATCTTACCAA+AGG - chr2.2:21610394-21610413 None:intergenic 40.0%
GATCTCTGATAAGGATCAGA+AGG - chr2.2:21609416-21609435 None:intergenic 40.0%
TAAGGATCAGAAGGCAACAA+AGG - chr2.2:21609407-21609426 None:intergenic 40.0%
TTCAAAGTCTCTTCCTGATC+AGG + chr2.2:21610470-21610489 MS.gene068681:CDS 40.0%
! AGGATAGCCTTAGCTGAAAA+GGG + chr2.2:21609215-21609234 MS.gene068681:CDS 40.0%
! GGGTTCATTTGAAGCAACAA+AGG - chr2.2:21609284-21609303 None:intergenic 40.0%
! TGGCAAGTATTAGTTCTTGG+TGG + chr2.2:21609787-21609806 MS.gene068681:intron 40.0%
! TTCTTGCTCTTCTCCCTTTT+TGG - chr2.2:21610232-21610251 None:intergenic 40.0%
!!! AGGAGATAAGCTTGGTTTTG+TGG + chr2.2:21610323-21610342 MS.gene068681:CDS 40.0%
AAGGAACCTTTGGGCCAAAA+AGG + chr2.2:21610215-21610234 MS.gene068681:CDS 45.0%
AATGCCCTAAGCTCATTGCT+TGG + chr2.2:21610418-21610437 MS.gene068681:CDS 45.0%
AGGAACCTTTGGGCCAAAAA+GGG + chr2.2:21610216-21610235 MS.gene068681:CDS 45.0%
ATCAGTTAAAGTGGGACGGA+GGG - chr2.2:21609834-21609853 None:intergenic 45.0%
ATGCCCTAAGCTCATTGCTT+GGG + chr2.2:21610419-21610438 MS.gene068681:CDS 45.0%
GATTACTGGGCAAGTCCATT+TGG + chr2.2:21609182-21609201 MS.gene068681:CDS 45.0%
TGACGTTGGAAGGAACCTTT+GGG + chr2.2:21610206-21610225 MS.gene068681:CDS 45.0%
TTGACGTTGGAAGGAACCTT+TGG + chr2.2:21610205-21610224 MS.gene068681:CDS 45.0%
! CAGGATAGCCTTAGCTGAAA+AGG + chr2.2:21609214-21609233 MS.gene068681:CDS 45.0%
!! TTTATAAAATATTATTAATC+AGG + chr2.2:21609493-21609512 MS.gene068681:intron 5.0%
ATCCTGACCCTCATGCCAAA+TGG - chr2.2:21609200-21609219 None:intergenic 50.0%
GATCAGTTAAAGTGGGACGG+AGG - chr2.2:21609835-21609854 None:intergenic 50.0%
GGCAAGTCCATTTGGCATGA+GGG + chr2.2:21609190-21609209 MS.gene068681:CDS 50.0%
TGGCCCAAGCAATGAGCTTA+GGG - chr2.2:21610425-21610444 None:intergenic 50.0%
TTGGCCCAAGCAATGAGCTT+AGG - chr2.2:21610426-21610445 None:intergenic 50.0%
!! CTTCTCCCTTTTTGGCCCAA+AGG - chr2.2:21610224-21610243 None:intergenic 50.0%
GGGCAAGTCCATTTGGCATG+AGG + chr2.2:21609189-21609208 MS.gene068681:CDS 55.0%
GTCCATTTGGCATGAGGGTC+AGG + chr2.2:21609195-21609214 MS.gene068681:CDS 55.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 21609158 21610497 21609158 ID=MS.gene068681
chr2.2 mRNA 21609158 21610497 21609158 ID=MS.gene068681.t1;Parent=MS.gene068681
chr2.2 exon 21609158 21609472 21609158 ID=MS.gene068681.t1.exon1;Parent=MS.gene068681.t1
chr2.2 CDS 21609158 21609472 21609158 ID=cds.MS.gene068681.t1;Parent=MS.gene068681.t1
chr2.2 exon 21610201 21610497 21610201 ID=MS.gene068681.t1.exon2;Parent=MS.gene068681.t1
chr2.2 CDS 21610201 21610497 21610201 ID=cds.MS.gene068681.t1;Parent=MS.gene068681.t1
Gene Sequence

>MS.gene068681

ATGGCTGATGAAGTGATTCTGCTAGATTACTGGGCAAGTCCATTTGGCATGAGGGTCAGGATAGCCTTAGCTGAAAAGGGTATCAAACATGAGTACAGAGAAGAAGATTTAAGGAACATGAGCCCTTTGTTGCTTCAAATGAACCCTATTTACAAGAAAATCCCTGTTCTCATTCATAATGGTAAATCCATTTGTGAATCTTTAATTGCTGTTCAGTATATTGATGAAGTTTGGAATGAGAAATCTCCTTTGTTGCCTTCTGATCCTTATCAGAGATCACAAGCTTTATTCTGGGCTGATTATGTTGATAAGAAGGTATATAAATTGGTCTTATATTTATAAAATATTATTAATCAGGAGACGAGAATTTAGAAAGAAAAAAAAAAGCTTATATTTTATATAATAAACCTATCAACTTTATTTTATCTTCTTTATAAAATTGTTATAAAATTAGCTTATATTGGAGACTTATATGATGAGTGTTTAAGCTATAATCACTTAACTAATTAGCTATTAAGCTATTTGTAAAAACTAGGGCCTTAATATGAATGAAATGTGTATGTCAATAATTTGAGGGGTACTTTTGTTTTAAACAAACGAATATTTATCATCATGCATGGTCACTATATTGGCAAGTATTAGTTCTTGGTGGCTGTTGTTTTTTCTTGTTTCTCCCTCCGTCCCACTTTAACTGATCATTTTGTTCATTTCAATCATATTAAAAAAAAGTGTACAAGTGAAAGAGAAAGAAAAATAGTTTTAACTGTCTTGTAAAGTATTGGTGCATTCCTCCTTCAAAAAAAGTATTGGTGCATTCCTTCTTATCATAAATGCAAAATAGAATATATTGAATTGTGAGTGATGAAAGTAGTATTAATTAGAGTTATAACTGGAAAAAAGTAATTATCATTGTATTAAAAAGTGAAATGAGTCAAAAAAATTTGGACAATTTTTTTTTACAAATGACTCAGTTGTTAAAGGAATGAGATAATATTGCATTTTATGATCTAACTAAGTGTGTGTCAATTCTCAATGGCAAATAGATATTTGACGTTGGAAGGAACCTTTGGGCCAAAAAGGGAGAAGAGCAAGAAGCTGCCAAGAAAGAATTCATAGATGTCCACAAATTGTTGGAGCAAGAATTGGGAGACAAGATTTATTATGGAGGAGATAAGCTTGGTTTTGTGGATGTAGCACTTATTCCATACTACACTTGGTTTAAAAGTTATGAAACCTTTGGTAAGATCAGTCTAGAGAAAGAATGCCCTAAGCTCATTGCTTGGGCCAATAGATGTATGCAGATTGAGAATGTTTCAAAGTCTCTTCCTGATCAGGATAAG
Protein sequence

>MS.gene068681.t1

MADEVILLDYWASPFGMRVRIALAEKGIKHEYREEDLRNMSPLLLQMNPIYKKIPVLIHNGKSICESLIAVQYIDEVWNEKSPLLPSDPYQRSQALFWADYVDKKIFDVGRNLWAKKGEEQEAAKKEFIDVHKLLEQELGDKIYYGGDKLGFVDVALIPYYTWFKSYETFGKISLEKECPKLIAWANRCMQIENVSKSLPDQDK