Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012776.t1 | XP_013458692.1 | 96.1 | 230 | 8 | 1 | 4 | 233 | 2 | 230 | 2.30E-121 | 444.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012776.t1 | P57108 | 65.3 | 222 | 73 | 2 | 6 | 227 | 2 | 219 | 1.1e-79 | 297.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012776.t1 | A0A072USC9 | 96.1 | 230 | 8 | 1 | 4 | 233 | 2 | 230 | 1.7e-121 | 444.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012776.t1 | MTR_4g134370 | 96.087 | 230 | 8 | 1 | 4 | 233 | 2 | 230 | 7.36e-166 | 457 |
| MS.gene012776.t1 | MTR_4g134380 | 83.843 | 229 | 32 | 1 | 1 | 229 | 3 | 226 | 1.54e-143 | 400 |
| MS.gene012776.t1 | MTR_4g134380 | 82.584 | 178 | 26 | 1 | 1 | 178 | 3 | 175 | 5.69e-108 | 308 |
| MS.gene012776.t1 | MTR_4g134360 | 85.714 | 126 | 15 | 1 | 21 | 146 | 16 | 138 | 9.31e-75 | 223 |
| MS.gene012776.t1 | MTR_2g070150 | 30.460 | 174 | 102 | 5 | 15 | 184 | 1 | 159 | 9.29e-15 | 70.9 |
| MS.gene012776.t1 | MTR_2g070180 | 29.775 | 178 | 98 | 5 | 15 | 184 | 1 | 159 | 8.61e-14 | 68.6 |
| MS.gene012776.t1 | MTR_2g070210 | 28.182 | 220 | 129 | 7 | 15 | 222 | 1 | 203 | 1.38e-13 | 67.8 |
| MS.gene012776.t1 | MTR_3g450790 | 32.258 | 155 | 96 | 4 | 32 | 180 | 15 | 166 | 3.13e-13 | 67.0 |
| MS.gene012776.t1 | MTR_8g061950 | 27.477 | 222 | 135 | 8 | 17 | 224 | 4 | 213 | 6.04e-13 | 66.2 |
| MS.gene012776.t1 | MTR_3g450930 | 31.928 | 166 | 98 | 5 | 28 | 184 | 11 | 170 | 8.20e-13 | 65.9 |
| MS.gene012776.t1 | MTR_7g065720 | 25.728 | 206 | 124 | 6 | 32 | 225 | 21 | 209 | 3.06e-12 | 64.3 |
| MS.gene012776.t1 | MTR_3g064700 | 29.651 | 172 | 112 | 3 | 21 | 186 | 5 | 173 | 6.20e-12 | 63.2 |
| MS.gene012776.t1 | MTR_2g070200 | 28.736 | 174 | 106 | 6 | 15 | 184 | 1 | 160 | 1.44e-11 | 62.4 |
| MS.gene012776.t1 | MTR_2g070140 | 31.013 | 158 | 90 | 5 | 31 | 184 | 1 | 143 | 2.01e-11 | 61.6 |
| MS.gene012776.t1 | MTR_1g115195 | 28.436 | 211 | 130 | 8 | 21 | 222 | 6 | 204 | 2.82e-11 | 61.6 |
| MS.gene012776.t1 | MTR_7g065230 | 27.570 | 214 | 136 | 7 | 21 | 230 | 10 | 208 | 4.74e-11 | 60.8 |
| MS.gene012776.t1 | MTR_0186s0030 | 36.458 | 96 | 57 | 2 | 15 | 109 | 1 | 93 | 5.35e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012776.t1 | AT2G02390 | 61.860 | 215 | 81 | 1 | 13 | 227 | 3 | 216 | 1.51e-94 | 276 |
| MS.gene012776.t1 | AT2G02380 | 62.559 | 211 | 78 | 1 | 17 | 227 | 10 | 219 | 7.71e-94 | 274 |
| MS.gene012776.t1 | AT2G02390 | 59.910 | 222 | 81 | 2 | 13 | 227 | 3 | 223 | 1.32e-91 | 269 |
| MS.gene012776.t1 | AT2G02390 | 63.298 | 188 | 68 | 1 | 13 | 200 | 3 | 189 | 1.31e-81 | 242 |
| MS.gene012776.t1 | AT2G02390 | 60.119 | 168 | 66 | 1 | 60 | 227 | 21 | 187 | 6.02e-70 | 213 |
| MS.gene012776.t1 | AT2G30870 | 33.548 | 155 | 94 | 3 | 32 | 180 | 15 | 166 | 2.09e-15 | 72.8 |
| MS.gene012776.t1 | AT2G30860 | 33.775 | 151 | 83 | 5 | 32 | 180 | 15 | 150 | 6.05e-12 | 62.4 |
| MS.gene012776.t1 | AT2G30860 | 33.333 | 174 | 83 | 7 | 32 | 187 | 15 | 173 | 1.04e-11 | 62.8 |
Find 40 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATACATACCAGGGTATTA+AGG | 0.307259 | 8.1:-432589 | None:intergenic |
| AGCTGATTCTGTATTCATAT+TGG | 0.330337 | 8.1:+431938 | MS.gene012776:CDS |
| CAACTGCTTTGTACTCATAT+TGG | 0.338820 | 8.1:-432011 | None:intergenic |
| GGCAACGTCTCCCGGAATGC+TGG | 0.346061 | 8.1:-436081 | None:intergenic |
| ATTATGCGATCCCAGCATTC+CGG | 0.359242 | 8.1:+436070 | MS.gene012776:CDS |
| CAAAAGAGCTATCAATTTCC+AGG | 0.361331 | 8.1:+432390 | MS.gene012776:CDS |
| GCTGCATCTGGTTGATTCTC+TGG | 0.375629 | 8.1:-436102 | None:intergenic |
| CTCAGGTAGCCTGCTGCATC+TGG | 0.379979 | 8.1:-436114 | None:intergenic |
| GAATGCTGGGATCGCATAAT+AGG | 0.380699 | 8.1:-436067 | None:intergenic |
| GCAGGGCCATCGACGAGAAC+AGG | 0.414471 | 8.1:-432207 | None:intergenic |
| GATTCTCTGGCAACGTCTCC+CGG | 0.429343 | 8.1:-436089 | None:intergenic |
| TTTGTTCCTGTTCTCGTCGA+TGG | 0.450370 | 8.1:+432201 | MS.gene012776:CDS |
| TTATGCGATCCCAGCATTCC+GGG | 0.466888 | 8.1:+436071 | MS.gene012776:CDS |
| ACTCATATTGGAGACCTTTG+AGG | 0.469153 | 8.1:-431999 | None:intergenic |
| TTTCTCAAGCTCAACCCTGC+TGG | 0.486257 | 8.1:+432177 | MS.gene012776:CDS |
| GTCCAGAGTGTAATTAGAAA+AGG | 0.497149 | 8.1:+432775 | MS.gene012776:CDS |
| GTAATTAGAAAAGGCTTCAC+AGG | 0.504567 | 8.1:+432784 | MS.gene012776:CDS |
| GCAACGTCTCCCGGAATGCT+GGG | 0.507165 | 8.1:-436080 | None:intergenic |
| CGTGTAATCTTGATAGAGTA+GGG | 0.516880 | 8.1:-436041 | None:intergenic |
| GGGAGCAAAGGATGTTGTTG+AGG | 0.523337 | 8.1:-432355 | None:intergenic |
| TCGTGTAATCTTGATAGAGT+AGG | 0.527947 | 8.1:-436042 | None:intergenic |
| CTAATTACACTCTGGACCCA+TGG | 0.531500 | 8.1:-432769 | None:intergenic |
| GCATTGCTCGCAGTATTTGG+AGG | 0.532414 | 8.1:+432324 | MS.gene012776:intron |
| AGCTATTAAAAGAACACGCT+GGG | 0.535135 | 8.1:+435027 | MS.gene012776:CDS |
| AAGGGAGAACAATATCATCC+TGG | 0.546207 | 8.1:+432042 | MS.gene012776:CDS |
| CACGCTGGGAGATATGCTAC+TGG | 0.561914 | 8.1:+435041 | MS.gene012776:CDS |
| AGAACAGGAACAAAACCAGC+AGG | 0.563922 | 8.1:-432192 | None:intergenic |
| GGTTGAGAGCAATTCGAACT+CGG | 0.563925 | 8.1:-431978 | None:intergenic |
| GAGAATCAACCAGATGCAGC+AGG | 0.565566 | 8.1:+436105 | MS.gene012776:CDS |
| CAGTCCCAAATTACTGACTC+AGG | 0.569373 | 8.1:-436131 | None:intergenic |
| CGAATTGCTCTCAACCTCAA+AGG | 0.578475 | 8.1:+431985 | MS.gene012776:CDS |
| TAGAAGCAGCATCTAACTGA+GGG | 0.581371 | 8.1:-435417 | None:intergenic |
| TGAATATCAGTAGGGAGCAA+AGG | 0.581413 | 8.1:-432367 | None:intergenic |
| AAGCTATTAAAAGAACACGC+TGG | 0.608867 | 8.1:+435026 | MS.gene012776:CDS |
| GAGAGCAATTCGAACTCGGA+AGG | 0.617162 | 8.1:-431974 | None:intergenic |
| TCTTCAAAACCTTAATACCC+TGG | 0.637265 | 8.1:+432580 | MS.gene012776:CDS |
| TTAGAAGCAGCATCTAACTG+AGG | 0.652562 | 8.1:-435418 | None:intergenic |
| TAAGAGATTCAACATTGACA+TGG | 0.678314 | 8.1:+435438 | MS.gene012776:CDS |
| GAACAGGAACAAAACCAGCA+GGG | 0.696163 | 8.1:-432191 | None:intergenic |
| AGAAGCAGCATCTAACTGAG+GGG | 0.751646 | 8.1:-435416 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTATTACTTTATACAT+CGG | - | chr8.1:435210-435229 | None:intergenic | 10.0% |
| !! | AAATATGCTTTATAGATTAT+TGG | - | chr8.1:433143-433162 | None:intergenic | 15.0% |
| !! | TTCATTATAATTTCAAATCT+AGG | + | chr8.1:433525-433544 | MS.gene012776:intron | 15.0% |
| !!! | AAAATATTTTTAACCAGTAA+AGG | - | chr8.1:434910-434929 | None:intergenic | 15.0% |
| !!! | AATATAAATTTCATTTTCTC+TGG | - | chr8.1:434154-434173 | None:intergenic | 15.0% |
| !!! | GTTTTTTTATTTCTCTTATT+AGG | - | chr8.1:434297-434316 | None:intergenic | 15.0% |
| !!! | TGCATTATATTCTAAAATAT+CGG | - | chr8.1:435242-435261 | None:intergenic | 15.0% |
| !!! | TGTTTTTAGGAATATATTTT+CGG | + | chr8.1:435336-435355 | MS.gene012776:intron | 15.0% |
| !!! | TTGTTTTGTTCTTTTTTTAA+AGG | + | chr8.1:432639-432658 | MS.gene012776:intron | 15.0% |
| !! | AAAGATTAATTAAGCATACA+AGG | - | chr8.1:432122-432141 | None:intergenic | 20.0% |
| !! | AATAAAGTGGATCATAAAAT+TGG | + | chr8.1:434620-434639 | MS.gene012776:intron | 20.0% |
| !! | AGAATAAACAATGAACTTTA+AGG | + | chr8.1:433764-433783 | MS.gene012776:intron | 20.0% |
| !! | AGTAAATAAATCCTTTCAAA+AGG | + | chr8.1:435129-435148 | MS.gene012776:intron | 20.0% |
| !! | CAAAAGTAAACAGATAAATA+CGG | + | chr8.1:434034-434053 | MS.gene012776:intron | 20.0% |
| !! | GTAAATAAATCCTTTCAAAA+GGG | + | chr8.1:435130-435149 | MS.gene012776:intron | 20.0% |
| !! | TAAAGTTCATTGTTTATTCT+TGG | - | chr8.1:433764-433783 | None:intergenic | 20.0% |
| !!! | ACATTGTAGATTTTTAGAAA+AGG | - | chr8.1:432276-432295 | None:intergenic | 20.0% |
| !!! | AGCATTTGTTATTAAAAAAG+AGG | - | chr8.1:434782-434801 | None:intergenic | 20.0% |
| !!! | ATTATATTCTAAAATATCGG+AGG | - | chr8.1:435239-435258 | None:intergenic | 20.0% |
| !!! | CAAGTTTTTGAAACTTAATA+TGG | + | chr8.1:435286-435305 | MS.gene012776:intron | 20.0% |
| !!! | TACATTTTTTTAACTGTTAG+AGG | - | chr8.1:433196-433215 | None:intergenic | 20.0% |
| !!! | TCTTACTTCTTCAAAATTTT+AGG | + | chr8.1:432616-432635 | MS.gene012776:intron | 20.0% |
| !!! | TCTTTTGCTACTATTTTTAT+TGG | - | chr8.1:432832-432851 | None:intergenic | 20.0% |
| !!! | TGAATCTGATTTAAGATTTT+TGG | - | chr8.1:433305-433324 | None:intergenic | 20.0% |
| !!! | TTTAACTTTATAGATCCTTT+TGG | + | chr8.1:432980-432999 | MS.gene012776:intron | 20.0% |
| ! | AAAACCAAATAGGTAAAACA+TGG | + | chr8.1:434425-434444 | MS.gene012776:intron | 25.0% |
| ! | AAACCAAATAGGTAAAACAT+GGG | + | chr8.1:434426-434445 | MS.gene012776:intron | 25.0% |
| ! | AAACTTATAACAATTGATCC+AGG | + | chr8.1:433401-433420 | MS.gene012776:intron | 25.0% |
| ! | AAAGCATATTTCCATATTGT+GGG | + | chr8.1:433152-433171 | MS.gene012776:intron | 25.0% |
| ! | ATATAGAAAGTTGTAAACTG+TGG | - | chr8.1:434481-434500 | None:intergenic | 25.0% |
| ! | ATATATCATATACTGCATCA+TGG | - | chr8.1:433906-433925 | None:intergenic | 25.0% |
| ! | ATTCATTTCAAAGTTCAAAC+AGG | - | chr8.1:434182-434201 | None:intergenic | 25.0% |
| ! | CACTTCTAAACTTATATTGT+AGG | - | chr8.1:433034-433053 | None:intergenic | 25.0% |
| ! | TAAAGCATATTTCCATATTG+TGG | + | chr8.1:433151-433170 | MS.gene012776:intron | 25.0% |
| ! | TAGCATATTGCATATGATAA+CGG | + | chr8.1:432925-432944 | MS.gene012776:intron | 25.0% |
| ! | TATATCTCAAAATTTGTCCT+TGG | - | chr8.1:433739-433758 | None:intergenic | 25.0% |
| ! | TCAATTGTTATAAGTTTGAG+TGG | - | chr8.1:433398-433417 | None:intergenic | 25.0% |
| !! | AAAGCAGTTGATCTTTTTAA+GGG | + | chr8.1:432024-432043 | MS.gene012776:CDS | 25.0% |
| !! | ATTTAGAATTTCTAAGCAAC+AGG | + | chr8.1:434351-434370 | MS.gene012776:intron | 25.0% |
| !! | GCATATATATAACCATTTTC+AGG | + | chr8.1:433263-433282 | MS.gene012776:intron | 25.0% |
| !! | TGTTGCTTAGAAATTCTAAA+TGG | - | chr8.1:434352-434371 | None:intergenic | 25.0% |
| !!! | ATGATCCACTTTATTTTGTT+AGG | - | chr8.1:434615-434634 | None:intergenic | 25.0% |
| !!! | ATGTTTTGTTGATTCAAACT+AGG | + | chr8.1:431867-431886 | MS.gene012776:intron | 25.0% |
| !!! | ATTGTTTTTACTTACTAGAG+AGG | - | chr8.1:434580-434599 | None:intergenic | 25.0% |
| !!! | TTGATGTTTTTATCGTAACA+AGG | - | chr8.1:435579-435598 | None:intergenic | 25.0% |
| !!! | TTTTCTTTTTCACTGTAAGT+TGG | + | chr8.1:432435-432454 | MS.gene012776:intron | 25.0% |
| AAACTTGCGATCATTAACTT+TGG | - | chr8.1:435273-435292 | None:intergenic | 30.0% | |
| AAACTTGTATCTAGTAAGGA+GGG | - | chr8.1:434941-434960 | None:intergenic | 30.0% | |
| AAAGAGTCAAAAATAACAGC+AGG | - | chr8.1:432228-432247 | None:intergenic | 30.0% | |
| AACATGTTTAACCATGAAAC+AGG | + | chr8.1:433960-433979 | MS.gene012776:intron | 30.0% | |
| AAGAGTCAAAAATAACAGCA+GGG | - | chr8.1:432227-432246 | None:intergenic | 30.0% | |
| AATGCAATTTGATACATGAC+AGG | - | chr8.1:435966-435985 | None:intergenic | 30.0% | |
| ACTGAAACTTGTATCTAGTA+AGG | - | chr8.1:434945-434964 | None:intergenic | 30.0% | |
| ACTTGCCTAACAAAATAAAG+TGG | + | chr8.1:434607-434626 | MS.gene012776:intron | 30.0% | |
| AGAGTGGCATTTAATGTTAA+TGG | + | chr8.1:434719-434738 | MS.gene012776:intron | 30.0% | |
| AGTGCTCTTGAAATTCTAAT+GGG | - | chr8.1:434243-434262 | None:intergenic | 30.0% | |
| ATAACAAATGCTACTGTAGT+TGG | + | chr8.1:434790-434809 | MS.gene012776:intron | 30.0% | |
| ATATGCATGACATAATTGAG+TGG | - | chr8.1:432874-432893 | None:intergenic | 30.0% | |
| ATGGTATGTTGCTAATCATT+TGG | + | chr8.1:435077-435096 | MS.gene012776:intron | 30.0% | |
| ATGTTAAATAGTGAATGCTG+GGG | + | chr8.1:433618-433637 | MS.gene012776:intron | 30.0% | |
| ATTAACATTAAATGCCACTC+TGG | - | chr8.1:434720-434739 | None:intergenic | 30.0% | |
| CAAAGATAAACTGGTCAATA+TGG | + | chr8.1:435884-435903 | MS.gene012776:intron | 30.0% | |
| CATACAAGGTTGTATGTAAT+GGG | - | chr8.1:432108-432127 | None:intergenic | 30.0% | |
| CATGTTAAATAGTGAATGCT+GGG | + | chr8.1:433617-433636 | MS.gene012776:intron | 30.0% | |
| CTGTTGATACAAAACCAAAT+AGG | + | chr8.1:434415-434434 | MS.gene012776:intron | 30.0% | |
| GCAAATGAAGAAGTAAACAA+AGG | + | chr8.1:434270-434289 | MS.gene012776:intron | 30.0% | |
| GTCGTCTGAAAACTAATAAA+AGG | + | chr8.1:435106-435125 | MS.gene012776:intron | 30.0% | |
| GTTGAAGAAAATATTCACTG+TGG | + | chr8.1:434741-434760 | MS.gene012776:intron | 30.0% | |
| TAAGAGATTCAACATTGACA+TGG | + | chr8.1:435438-435457 | MS.gene012776:CDS | 30.0% | |
| TACGATAAAAACATCAAGCA+AGG | + | chr8.1:435582-435601 | MS.gene012776:intron | 30.0% | |
| TACTGCATCATGGAAATTTA+AGG | - | chr8.1:433896-433915 | None:intergenic | 30.0% | |
| TATATTTCCTTCCTGTTTCA+TGG | - | chr8.1:433974-433993 | None:intergenic | 30.0% | |
| TCATGTTAAATAGTGAATGC+TGG | + | chr8.1:433616-433635 | MS.gene012776:intron | 30.0% | |
| TCATGTTCATTATCATTTGC+AGG | + | chr8.1:435378-435397 | MS.gene012776:intron | 30.0% | |
| TGAAGGTTTCAAAGATAAAC+TGG | + | chr8.1:435875-435894 | MS.gene012776:intron | 30.0% | |
| TGCAGTATATGATATATCAC+TGG | + | chr8.1:433909-433928 | MS.gene012776:intron | 30.0% | |
| TGGATCATAAAATTGGTCAA+AGG | + | chr8.1:434627-434646 | MS.gene012776:intron | 30.0% | |
| TGTTTCATGGTTAAACATGT+TGG | - | chr8.1:433961-433980 | None:intergenic | 30.0% | |
| TTGTTATAAGTTTGAGTGGT+CGG | - | chr8.1:433394-433413 | None:intergenic | 30.0% | |
| ! | AAACATGTTGGTTGTGATTT+AGG | - | chr8.1:433949-433968 | None:intergenic | 30.0% |
| ! | AACTTAATATGGTTAGCTGT+AGG | + | chr8.1:435297-435316 | MS.gene012776:intron | 30.0% |
| ! | AAGCACATTTGCATGTTTTT+AGG | + | chr8.1:435323-435342 | MS.gene012776:intron | 30.0% |
| ! | AGAAAAGTTAAAGTACTCCA+AGG | + | chr8.1:433719-433738 | MS.gene012776:intron | 30.0% |
| ! | AGCTGATTCTGTATTCATAT+TGG | + | chr8.1:431938-431957 | MS.gene012776:CDS | 30.0% |
| ! | ATTTTTAACCAGTAAAGGAG+AGG | - | chr8.1:434905-434924 | None:intergenic | 30.0% |
| ! | CAAAGCAGTTGATCTTTTTA+AGG | + | chr8.1:432023-432042 | MS.gene012776:CDS | 30.0% |
| ! | CATTGCTAGCCAATATTTTT+GGG | - | chr8.1:435164-435183 | None:intergenic | 30.0% |
| ! | CTCTTTTGTGAATATCAGTA+GGG | - | chr8.1:432378-432397 | None:intergenic | 30.0% |
| ! | GGTCTCATGTATATTTTATG+CGG | + | chr8.1:435472-435491 | MS.gene012776:intron | 30.0% |
| ! | GTCTCATGTATATTTTATGC+GGG | + | chr8.1:435473-435492 | MS.gene012776:intron | 30.0% |
| ! | TAAATTTCATTTTCTCTGGC+AGG | - | chr8.1:434150-434169 | None:intergenic | 30.0% |
| ! | TCATACGTAAATGCAACTTT+TGG | - | chr8.1:433007-433026 | None:intergenic | 30.0% |
| ! | TCTCATGTATATTTTATGCG+GGG | + | chr8.1:435474-435493 | MS.gene012776:intron | 30.0% |
| !! | GGAGTACTTTAACTTTTCTA+AGG | - | chr8.1:433718-433737 | None:intergenic | 30.0% |
| !! | TCAAATTCATGTTCTGGAAA+TGG | + | chr8.1:432498-432517 | MS.gene012776:intron | 30.0% |
| !!! | TGACTCTTTTGCTATTATCA+TGG | + | chr8.1:432239-432258 | MS.gene012776:CDS | 30.0% |
| !!! | TGCTACTATTTTTATTGGTG+AGG | - | chr8.1:432827-432846 | None:intergenic | 30.0% |
| !!! | TTTTTTAACTGTTAGAGGCT+AGG | - | chr8.1:433191-433210 | None:intergenic | 30.0% |
| AACAAATGTTCTTTCCACCA+GGG | - | chr8.1:434665-434684 | None:intergenic | 35.0% | |
| AACGGATCATCAAATGAACA+AGG | + | chr8.1:432943-432962 | MS.gene012776:intron | 35.0% | |
| AAGATGTGACATACATACCA+GGG | - | chr8.1:432600-432619 | None:intergenic | 35.0% | |
| AAGCTATTAAAAGAACACGC+TGG | + | chr8.1:435026-435045 | MS.gene012776:CDS | 35.0% | |
| AGCAATGCCAACTATTCAAA+TGG | + | chr8.1:435177-435196 | MS.gene012776:intron | 35.0% | |
| AGCTAATAGCTCAAGCAAAT+AGG | - | chr8.1:435678-435697 | None:intergenic | 35.0% | |
| AGCTATTAAAAGAACACGCT+GGG | + | chr8.1:435027-435046 | MS.gene012776:CDS | 35.0% | |
| AGTAAGTCATGCGATGAATT+TGG | - | chr8.1:435991-436010 | None:intergenic | 35.0% | |
| AGTCTGTATCACGGTATATT+TGG | + | chr8.1:433100-433119 | MS.gene012776:intron | 35.0% | |
| AGTTAAGAAGTGGAGTTACA+AGG | - | chr8.1:434856-434875 | None:intergenic | 35.0% | |
| ATGGATAAAACCAGTCATTG+TGG | + | chr8.1:435903-435922 | MS.gene012776:intron | 35.0% | |
| CAAAAGAGCTATCAATTTCC+AGG | + | chr8.1:432390-432409 | MS.gene012776:CDS | 35.0% | |
| CAACTGCTTTGTACTCATAT+TGG | - | chr8.1:432014-432033 | None:intergenic | 35.0% | |
| CACAGATAACTTACACTTCT+CGG | + | chr8.1:434060-434079 | MS.gene012776:intron | 35.0% | |
| CAGTGCTCTTGAAATTCTAA+TGG | - | chr8.1:434244-434263 | None:intergenic | 35.0% | |
| CATTCAAAAGATCAGTGTCT+AGG | + | chr8.1:433241-433260 | MS.gene012776:intron | 35.0% | |
| CATTCTGCTTGGACAATTAA+GGG | - | chr8.1:436017-436036 | None:intergenic | 35.0% | |
| CGTGTAATCTTGATAGAGTA+GGG | - | chr8.1:436044-436063 | None:intergenic | 35.0% | |
| CTATGTACAAGTCTGTATCA+CGG | + | chr8.1:433091-433110 | MS.gene012776:intron | 35.0% | |
| GAAACTTGTATCTAGTAAGG+AGG | - | chr8.1:434942-434961 | None:intergenic | 35.0% | |
| GATCAAAGAAGCTGTAGTAA+TGG | - | chr8.1:435535-435554 | None:intergenic | 35.0% | |
| GCACTATATACTTAGTTACC+TGG | - | chr8.1:432411-432430 | None:intergenic | 35.0% | |
| GCATACAAGGTTGTATGTAA+TGG | - | chr8.1:432109-432128 | None:intergenic | 35.0% | |
| GTAAACTTGGAAGCTCAAAA+GGG | - | chr8.1:434539-434558 | None:intergenic | 35.0% | |
| GTAAGTCATGCGATGAATTT+GGG | - | chr8.1:435990-436009 | None:intergenic | 35.0% | |
| GTAATTAGAAAAGGCTTCAC+AGG | + | chr8.1:432784-432803 | MS.gene012776:CDS | 35.0% | |
| GTCCAGAGTGTAATTAGAAA+AGG | + | chr8.1:432775-432794 | MS.gene012776:CDS | 35.0% | |
| GTCTGTATCACGGTATATTT+GGG | + | chr8.1:433101-433120 | MS.gene012776:intron | 35.0% | |
| GTTATTAAAAAAGAGGAGCG+AGG | - | chr8.1:434775-434794 | None:intergenic | 35.0% | |
| TAACAAATGTTCTTTCCACC+AGG | - | chr8.1:434666-434685 | None:intergenic | 35.0% | |
| TAAGATGTGACATACATACC+AGG | - | chr8.1:432601-432620 | None:intergenic | 35.0% | |
| TAATTGAGTGGCATTAGCTA+TGG | - | chr8.1:432862-432881 | None:intergenic | 35.0% | |
| TACAAGTTTCAGTGTGTTGT+TGG | + | chr8.1:434952-434971 | MS.gene012776:intron | 35.0% | |
| TACTACAGCTTCTTTGATCA+AGG | + | chr8.1:435536-435555 | MS.gene012776:intron | 35.0% | |
| TAGATATAGTCCTCATTCAC+AGG | - | chr8.1:433808-433827 | None:intergenic | 35.0% | |
| TCATTCTGCTTGGACAATTA+AGG | - | chr8.1:436018-436037 | None:intergenic | 35.0% | |
| TCCAGAACATGAATTTGAAC+AGG | - | chr8.1:432496-432515 | None:intergenic | 35.0% | |
| TCCTGTTCAAATTCATGTTC+TGG | + | chr8.1:432492-432511 | MS.gene012776:intron | 35.0% | |
| TCGTGTAATCTTGATAGAGT+AGG | - | chr8.1:436045-436064 | None:intergenic | 35.0% | |
| TCTTCAAAACCTTAATACCC+TGG | + | chr8.1:432580-432599 | MS.gene012776:CDS | 35.0% | |
| TGATCAGCCATTTGAATAGT+TGG | - | chr8.1:435187-435206 | None:intergenic | 35.0% | |
| TGTTAAATAGTGAATGCTGG+GGG | + | chr8.1:433619-433638 | MS.gene012776:intron | 35.0% | |
| TGTTATAAGTTTGAGTGGTC+GGG | - | chr8.1:433393-433412 | None:intergenic | 35.0% | |
| TGTTCATTATCATTTGCAGG+CGG | + | chr8.1:435381-435400 | MS.gene012776:intron | 35.0% | |
| TGTTTAACCATGAAACAGGA+AGG | + | chr8.1:433964-433983 | MS.gene012776:intron | 35.0% | |
| TTAAAGTAGATTGAACTCCC+TGG | + | chr8.1:434089-434108 | MS.gene012776:intron | 35.0% | |
| ! | AATGCAACTTTTGGACCAAA+AGG | - | chr8.1:432998-433017 | None:intergenic | 35.0% |
| ! | ACATACATACCAGGGTATTA+AGG | - | chr8.1:432592-432611 | None:intergenic | 35.0% |
| ! | AGCCTTTTCTAATTACACTC+TGG | - | chr8.1:432780-432799 | None:intergenic | 35.0% |
| ! | ATGTATGGCTTGTATTTCTG+TGG | + | chr8.1:435507-435526 | MS.gene012776:intron | 35.0% |
| ! | ATTGACATGGTAGTGTTCTA+TGG | + | chr8.1:435451-435470 | MS.gene012776:intron | 35.0% |
| ! | CTTTTGAGCTTCCAAGTTTA+CGG | + | chr8.1:434538-434557 | MS.gene012776:intron | 35.0% |
| ! | GCATTGCTAGCCAATATTTT+TGG | - | chr8.1:435165-435184 | None:intergenic | 35.0% |
| ! | GCTCTTTTGTGAATATCAGT+AGG | - | chr8.1:432379-432398 | None:intergenic | 35.0% |
| ! | GTAGTTGGTATTACTGCTTT+GGG | + | chr8.1:434805-434824 | MS.gene012776:intron | 35.0% |
| ! | GTTGCTAATCATTTGGAGTT+TGG | + | chr8.1:435084-435103 | MS.gene012776:intron | 35.0% |
| ! | TAGTTGGTATTACTGCTTTG+GGG | + | chr8.1:434806-434825 | MS.gene012776:intron | 35.0% |
| ! | TGAGAAAAGTGTACATGTTG+AGG | - | chr8.1:433853-433872 | None:intergenic | 35.0% |
| ! | TGTAGTTGGTATTACTGCTT+TGG | + | chr8.1:434804-434823 | MS.gene012776:intron | 35.0% |
| !! | CACTTTTTATCCTGTGAATG+AGG | + | chr8.1:433795-433814 | MS.gene012776:intron | 35.0% |
| !! | CTTCTATTGATTTCATCCAC+AGG | + | chr8.1:432526-432545 | MS.gene012776:intron | 35.0% |
| !! | GTTGTATGTAATGGGTTAGT+GGG | - | chr8.1:432100-432119 | None:intergenic | 35.0% |
| !!! | AGGGTATTAAGGTTTTGAAG+AGG | - | chr8.1:432581-432600 | None:intergenic | 35.0% |
| AAAGGAGAGGATGTAAGGTT+TGG | - | chr8.1:434892-434911 | None:intergenic | 40.0% | |
| AAGGAGAGGATGTAAGGTTT+GGG | - | chr8.1:434891-434910 | None:intergenic | 40.0% | |
| AAGGGAGAACAATATCATCC+TGG | + | chr8.1:432042-432061 | MS.gene012776:CDS | 40.0% | |
| AATGCTGTTGTGCCTGAAAA+TGG | - | chr8.1:433278-433297 | None:intergenic | 40.0% | |
| ACTCATATTGGAGACCTTTG+AGG | - | chr8.1:432002-432021 | None:intergenic | 40.0% | |
| AGGACAGACAACAATTAGCA+GGG | + | chr8.1:433545-433564 | MS.gene012776:intron | 40.0% | |
| ATTCAAACTCACCCATCCAA+TGG | + | chr8.1:433320-433339 | MS.gene012776:intron | 40.0% | |
| CAAGTCATCAGACAAACTGA+TGG | + | chr8.1:433359-433378 | MS.gene012776:intron | 40.0% | |
| CCCTGATGAAAAACTTCCAT+GGG | + | chr8.1:432753-432772 | MS.gene012776:CDS | 40.0% | |
| CGGGGTTGTAATGAAATGTA+TGG | + | chr8.1:435492-435511 | MS.gene012776:intron | 40.0% | |
| CGTAAACTTGGAAGCTCAAA+AGG | - | chr8.1:434540-434559 | None:intergenic | 40.0% | |
| GAAGCTTCGATCATTTGCAT+GGG | - | chr8.1:433435-433454 | None:intergenic | 40.0% | |
| GACAACAGCGGATATATGTT+TGG | - | chr8.1:435636-435655 | None:intergenic | 40.0% | |
| GACATATGTGACCCACAATA+TGG | - | chr8.1:433166-433185 | None:intergenic | 40.0% | |
| GTTAAATAGTGAATGCTGGG+GGG | + | chr8.1:433620-433639 | MS.gene012776:intron | 40.0% | |
| TAAGAAGTGGAGTTACAAGG+AGG | - | chr8.1:434853-434872 | None:intergenic | 40.0% | |
| TAGAAGCAGCATCTAACTGA+GGG | - | chr8.1:435420-435439 | None:intergenic | 40.0% | |
| TAGCTCAAGCAAATAGGCAA+AGG | - | chr8.1:435672-435691 | None:intergenic | 40.0% | |
| TAGGACAGACAACAATTAGC+AGG | + | chr8.1:433544-433563 | MS.gene012776:intron | 40.0% | |
| TATGCATTGCTCGCAGTATT+TGG | + | chr8.1:432321-432340 | MS.gene012776:intron | 40.0% | |
| TCAACAGAAAGATACGCCTA+GGG | + | chr8.1:433870-433889 | MS.gene012776:intron | 40.0% | |
| TCTAAATGGCAGCACATGTA+TGG | - | chr8.1:434338-434357 | None:intergenic | 40.0% | |
| TGAACTCCCTGGTAAAACAA+GGG | + | chr8.1:434100-434119 | MS.gene012776:intron | 40.0% | |
| TGAAGCTTCGATCATTTGCA+TGG | - | chr8.1:433436-433455 | None:intergenic | 40.0% | |
| TGAATATCAGTAGGGAGCAA+AGG | - | chr8.1:432370-432389 | None:intergenic | 40.0% | |
| TGCACTCTAAACCCACAAAA+CGG | - | chr8.1:432671-432690 | None:intergenic | 40.0% | |
| TTAGAAGCAGCATCTAACTG+AGG | - | chr8.1:435421-435440 | None:intergenic | 40.0% | |
| TTCCACTCTAGTGATTGCAT+GGG | + | chr8.1:433651-433670 | MS.gene012776:intron | 40.0% | |
| TTCCTCCTATACCATTGGAT+GGG | - | chr8.1:433334-433353 | None:intergenic | 40.0% | |
| TTGAACTCCCTGGTAAAACA+AGG | + | chr8.1:434099-434118 | MS.gene012776:intron | 40.0% | |
| TTGCTTTCCTCCTATACCAT+TGG | - | chr8.1:433339-433358 | None:intergenic | 40.0% | |
| TTGGAGTTGGACAAAACACA+AGG | - | chr8.1:435617-435636 | None:intergenic | 40.0% | |
| TTTCCACTCTAGTGATTGCA+TGG | + | chr8.1:433650-433669 | MS.gene012776:intron | 40.0% | |
| TTTCCTCCTATACCATTGGA+TGG | - | chr8.1:433335-433354 | None:intergenic | 40.0% | |
| TTTGAGAGTTCCACAATGAC+TGG | - | chr8.1:435916-435935 | None:intergenic | 40.0% | |
| ! | AAAGGAAGCAACCGTTTTGT+GGG | + | chr8.1:432657-432676 | MS.gene012776:intron | 40.0% |
| ! | AAAGGCATAGTTTGTATCCC+TGG | + | chr8.1:434645-434664 | MS.gene012776:intron | 40.0% |
| ! | ACCCATGGAAGTTTTTCATC+AGG | - | chr8.1:432757-432776 | None:intergenic | 40.0% |
| ! | ACGGTATATTTGGGATGTCT+AGG | + | chr8.1:433110-433129 | MS.gene012776:intron | 40.0% |
| ! | AGCGGATATATGTTTGGAGT+TGG | - | chr8.1:435630-435649 | None:intergenic | 40.0% |
| ! | AGTTGGTATTACTGCTTTGG+GGG | + | chr8.1:434807-434826 | MS.gene012776:intron | 40.0% |
| ! | ATTTGTTAGCTGCAACACTC+GGG | + | chr8.1:434678-434697 | MS.gene012776:intron | 40.0% |
| ! | CATTTGTTAGCTGCAACACT+CGG | + | chr8.1:434677-434696 | MS.gene012776:intron | 40.0% |
| ! | CCCATGGAAGTTTTTCATCA+GGG | - | chr8.1:432756-432775 | None:intergenic | 40.0% |
| ! | TAAAGGAAGCAACCGTTTTG+TGG | + | chr8.1:432656-432675 | MS.gene012776:intron | 40.0% |
| ! | TACTGGAGACGAAGTTTTCA+TGG | + | chr8.1:435058-435077 | MS.gene012776:CDS | 40.0% |
| ! | TATCATCCTGGTTAGTTCGT+TGG | + | chr8.1:432054-432073 | MS.gene012776:intron | 40.0% |
| ! | TCATGGAAATTTAAGGCCCT+AGG | - | chr8.1:433889-433908 | None:intergenic | 40.0% |
| ! | TGAGGACTATATCTAGAGCA+CGG | + | chr8.1:433813-433832 | MS.gene012776:intron | 40.0% |
| ! | TGGCCCATGTTTTACCTATT+TGG | - | chr8.1:434432-434451 | None:intergenic | 40.0% |
| ! | TTGACTATCTTTTGCCAGAG+TGG | + | chr8.1:434703-434722 | MS.gene012776:intron | 40.0% |
| !! | GCGATCATTAACTTTGGAGT+TGG | - | chr8.1:435267-435286 | None:intergenic | 40.0% |
| !! | GGTTGTATGTAATGGGTTAG+TGG | - | chr8.1:432101-432120 | None:intergenic | 40.0% |
| !!! | AGCCAATATTTTTGGGCTAC+TGG | - | chr8.1:435157-435176 | None:intergenic | 40.0% |
| !!! | GCCAATATTTTTGGGCTACT+GGG | - | chr8.1:435156-435175 | None:intergenic | 40.0% |
| ACTCACCCATCCAATGGTAT+AGG | + | chr8.1:433326-433345 | MS.gene012776:intron | 45.0% | |
| AGAACAGGAACAAAACCAGC+AGG | - | chr8.1:432195-432214 | None:intergenic | 45.0% | |
| AGAAGCAGCATCTAACTGAG+GGG | - | chr8.1:435419-435438 | None:intergenic | 45.0% | |
| AGAGGATGTAAGGTTTGGGT+TGG | - | chr8.1:434887-434906 | None:intergenic | 45.0% | |
| AGTAGGGAACTCATTCTGCT+TGG | - | chr8.1:436028-436047 | None:intergenic | 45.0% | |
| ATTATGCGATCCCAGCATTC+CGG | + | chr8.1:436070-436089 | MS.gene012776:CDS | 45.0% | |
| CCAGTAAAGGAGAGGATGTA+AGG | - | chr8.1:434897-434916 | None:intergenic | 45.0% | |
| CCTTACATCCTCTCCTTTAC+TGG | + | chr8.1:434894-434913 | MS.gene012776:intron | 45.0% | |
| CGAATTGCTCTCAACCTCAA+AGG | + | chr8.1:431985-432004 | MS.gene012776:CDS | 45.0% | |
| CTAATTACACTCTGGACCCA+TGG | - | chr8.1:432772-432791 | None:intergenic | 45.0% | |
| CTCAACAGAAAGATACGCCT+AGG | + | chr8.1:433869-433888 | MS.gene012776:intron | 45.0% | |
| CTTCGATCATTTGCATGGGT+TGG | - | chr8.1:433431-433450 | None:intergenic | 45.0% | |
| GAAACAATACTGACAGCCTG+TGG | - | chr8.1:432545-432564 | None:intergenic | 45.0% | |
| GAACAGGAACAAAACCAGCA+GGG | - | chr8.1:432194-432213 | None:intergenic | 45.0% | |
| GAAGTTCTCCTCCGTAAACT+TGG | - | chr8.1:434552-434571 | None:intergenic | 45.0% | |
| GAATGCTGGGATCGCATAAT+AGG | - | chr8.1:436070-436089 | None:intergenic | 45.0% | |
| GCCCAGTAGCCCAAAAATAT+TGG | + | chr8.1:435152-435171 | MS.gene012776:intron | 45.0% | |
| GCCCTGATGAAAAACTTCCA+TGG | + | chr8.1:432752-432771 | MS.gene012776:CDS | 45.0% | |
| GGGGTAGAGAAGTTAAGAAG+TGG | - | chr8.1:434866-434885 | None:intergenic | 45.0% | |
| GGTTGAGAGCAATTCGAACT+CGG | - | chr8.1:431981-432000 | None:intergenic | 45.0% | |
| GTGGGCAAGGAAAAAAAGAG+AGG | - | chr8.1:432082-432101 | None:intergenic | 45.0% | |
| TACCCATGCAATCACTAGAG+TGG | - | chr8.1:433656-433675 | None:intergenic | 45.0% | |
| TCAAGCAAATAGGCAAAGGC+CGG | - | chr8.1:435668-435687 | None:intergenic | 45.0% | |
| TTGAGCTTCCAAGTTTACGG+AGG | + | chr8.1:434541-434560 | MS.gene012776:intron | 45.0% | |
| TTTGTTCCTGTTCTCGTCGA+TGG | + | chr8.1:432201-432220 | MS.gene012776:CDS | 45.0% | |
| ! | CAAAAGGGTGTGACGGAATT+CGG | - | chr8.1:434524-434543 | None:intergenic | 45.0% |
| ! | GAGGATGTAAGGTTTGGGTT+GGG | - | chr8.1:434886-434905 | None:intergenic | 45.0% |
| ! | TTGTGAGCTCATTGACTGAC+TGG | - | chr8.1:434452-434471 | None:intergenic | 45.0% |
| !! | AGGATGTAAGGTTTGGGTTG+GGG | - | chr8.1:434885-434904 | None:intergenic | 45.0% |
| !! | ATGTAATGGGTTAGTGGGCA+AGG | - | chr8.1:432095-432114 | None:intergenic | 45.0% |
| !!! | TCACGTCCCTTGTTTTACCA+GGG | - | chr8.1:434109-434128 | None:intergenic | 45.0% |
| !!! | TTCACGTCCCTTGTTTTACC+AGG | - | chr8.1:434110-434129 | None:intergenic | 45.0% |
| CACCCATCCAATGGTATAGG+AGG | + | chr8.1:433329-433348 | MS.gene012776:intron | 50.0% | |
| CGCTGTTGTCTAAATGCCTC+CGG | + | chr8.1:435646-435665 | MS.gene012776:intron | 50.0% | |
| GAGAATCAACCAGATGCAGC+AGG | + | chr8.1:436105-436124 | MS.gene012776:CDS | 50.0% | |
| GAGAGCAATTCGAACTCGGA+AGG | - | chr8.1:431977-431996 | None:intergenic | 50.0% | |
| GAGGAACCAACGAACTAACC+AGG | - | chr8.1:432063-432082 | None:intergenic | 50.0% | |
| GCATTGCTCGCAGTATTTGG+AGG | + | chr8.1:432324-432343 | MS.gene012776:intron | 50.0% | |
| GGGAGCAAAGGATGTTGTTG+AGG | - | chr8.1:432358-432377 | None:intergenic | 50.0% | |
| TTATGCGATCCCAGCATTCC+GGG | + | chr8.1:436071-436090 | MS.gene012776:CDS | 50.0% | |
| TTTCTCAAGCTCAACCCTGC+TGG | + | chr8.1:432177-432196 | MS.gene012776:CDS | 50.0% | |
| ! | GCTGCATCTGGTTGATTCTC+TGG | - | chr8.1:436105-436124 | None:intergenic | 50.0% |
| ! | GGAAGCTCAAAAGGGTGTGA+CGG | - | chr8.1:434531-434550 | None:intergenic | 50.0% |
| ! | GGCATAGTTTGTATCCCTGG+TGG | + | chr8.1:434648-434667 | MS.gene012776:intron | 50.0% |
| ! | GTGTGACGGAATTCGGATCA+CGG | - | chr8.1:434517-434536 | None:intergenic | 50.0% |
| ! | TCTAGAGCACGGTAACAGAC+TGG | + | chr8.1:433824-433843 | MS.gene012776:intron | 50.0% |
| ! | TGTGACGGAATTCGGATCAC+GGG | - | chr8.1:434516-434535 | None:intergenic | 50.0% |
| !! | CGATCATTTGCATGGGTTGG+TGG | - | chr8.1:433428-433447 | None:intergenic | 50.0% |
| !! | CGGAGGCATTTAGACAACAG+CGG | - | chr8.1:435648-435667 | None:intergenic | 50.0% |
| !! | GGTATTACTGCTTTGGGGGT+GGG | + | chr8.1:434811-434830 | MS.gene012776:intron | 50.0% |
| !! | GTATTACTGCTTTGGGGGTG+GGG | + | chr8.1:434812-434831 | MS.gene012776:intron | 50.0% |
| !! | TATTACTGCTTTGGGGGTGG+GGG | + | chr8.1:434813-434832 | MS.gene012776:intron | 50.0% |
| !! | TGGTATTACTGCTTTGGGGG+TGG | + | chr8.1:434810-434829 | MS.gene012776:intron | 50.0% |
| AGCAAATAGGCAAAGGCCGG+AGG | - | chr8.1:435665-435684 | None:intergenic | 55.0% | |
| CACGCTGGGAGATATGCTAC+TGG | + | chr8.1:435041-435060 | MS.gene012776:CDS | 55.0% | |
| CTTCACCAACAGCCAACGAG+TGG | - | chr8.1:435860-435879 | None:intergenic | 55.0% | |
| GATTCTCTGGCAACGTCTCC+CGG | - | chr8.1:436092-436111 | None:intergenic | 55.0% | |
| ! | CACTCGTTGGCTGTTGGTGA+AGG | + | chr8.1:435858-435877 | MS.gene012776:intron | 55.0% |
| ! | GGCTACTGGGCCCTTTTGAA+AGG | - | chr8.1:435143-435162 | None:intergenic | 55.0% |
| !! | ATTACTGCTTTGGGGGTGGG+GGG | + | chr8.1:434814-434833 | MS.gene012776:intron | 55.0% |
| !! | TTTGCATGGGTTGGTGGTCC+TGG | - | chr8.1:433422-433441 | None:intergenic | 55.0% |
| CAACAGCCAACGAGTGGTGC+AGG | - | chr8.1:435854-435873 | None:intergenic | 60.0% | |
| CTCAGGTAGCCTGCTGCATC+TGG | - | chr8.1:436117-436136 | None:intergenic | 60.0% | |
| GCAACGTCTCCCGGAATGCT+GGG | - | chr8.1:436083-436102 | None:intergenic | 60.0% | |
| TGCTTGCCTGCACCACTCGT+TGG | + | chr8.1:435845-435864 | MS.gene012776:intron | 60.0% | |
| ! | CTGCACCACTCGTTGGCTGT+TGG | + | chr8.1:435852-435871 | MS.gene012776:intron | 60.0% |
| GCAGGGCCATCGACGAGAAC+AGG | - | chr8.1:432210-432229 | None:intergenic | 65.0% | |
| GGCAACGTCTCCCGGAATGC+TGG | - | chr8.1:436084-436103 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 431817 | 436143 | 431817 | ID=MS.gene012776 |
| chr8.1 | mRNA | 431817 | 436143 | 431817 | ID=MS.gene012776.t1;Parent=MS.gene012776 |
| chr8.1 | exon | 431817 | 431819 | 431817 | ID=MS.gene012776.t1.exon1;Parent=MS.gene012776.t1 |
| chr8.1 | CDS | 431817 | 431819 | 431817 | ID=cds.MS.gene012776.t1;Parent=MS.gene012776.t1 |
| chr8.1 | exon | 431889 | 432063 | 431889 | ID=MS.gene012776.t1.exon2;Parent=MS.gene012776.t1 |
| chr8.1 | CDS | 431889 | 432063 | 431889 | ID=cds.MS.gene012776.t1;Parent=MS.gene012776.t1 |
| chr8.1 | exon | 432175 | 432260 | 432175 | ID=MS.gene012776.t1.exon3;Parent=MS.gene012776.t1 |
| chr8.1 | CDS | 432175 | 432260 | 432175 | ID=cds.MS.gene012776.t1;Parent=MS.gene012776.t1 |
| chr8.1 | exon | 432337 | 432411 | 432337 | ID=MS.gene012776.t1.exon4;Parent=MS.gene012776.t1 |
| chr8.1 | CDS | 432337 | 432411 | 432337 | ID=cds.MS.gene012776.t1;Parent=MS.gene012776.t1 |
| chr8.1 | exon | 432548 | 432601 | 432548 | ID=MS.gene012776.t1.exon5;Parent=MS.gene012776.t1 |
| chr8.1 | CDS | 432548 | 432601 | 432548 | ID=cds.MS.gene012776.t1;Parent=MS.gene012776.t1 |
| chr8.1 | exon | 432730 | 432805 | 432730 | ID=MS.gene012776.t1.exon6;Parent=MS.gene012776.t1 |
| chr8.1 | CDS | 432730 | 432805 | 432730 | ID=cds.MS.gene012776.t1;Parent=MS.gene012776.t1 |
| chr8.1 | exon | 435018 | 435079 | 435018 | ID=MS.gene012776.t1.exon7;Parent=MS.gene012776.t1 |
| chr8.1 | CDS | 435018 | 435079 | 435018 | ID=cds.MS.gene012776.t1;Parent=MS.gene012776.t1 |
| chr8.1 | exon | 435400 | 435459 | 435400 | ID=MS.gene012776.t1.exon8;Parent=MS.gene012776.t1 |
| chr8.1 | CDS | 435400 | 435459 | 435400 | ID=cds.MS.gene012776.t1;Parent=MS.gene012776.t1 |
| chr8.1 | exon | 436033 | 436143 | 436033 | ID=MS.gene012776.t1.exon9;Parent=MS.gene012776.t1 |
| chr8.1 | CDS | 436033 | 436143 | 436033 | ID=cds.MS.gene012776.t1;Parent=MS.gene012776.t1 |
| Gene Sequence |
| Protein sequence |
