AlfalfaGEDB | MS.gene063436

M. sativa cultivar XinJiangDaYe / MS.gene063436

KEGG: K00799
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF02798.23 PF13410.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063436.t1	KEH38386.1	96.8	221	6	1	1	220	1	221	7.50E-122	446.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063436.t1	Q03666	66.2	219	72	2	3	220	4	221	5.3e-84	312.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063436.t1	A0A072V9X8	96.8	221	6	1	1	220	1	221	5.4e-122	446.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene04932	MS.gene063436	0.806335	8.65E-50	-1.69E-46
MS.gene049549	MS.gene063436	0.814587	1.43E-51	-1.69E-46
MS.gene049813	MS.gene063436	0.807716	4.41E-50	-1.69E-46
MS.gene051440	MS.gene063436	0.800544	1.37E-48	-1.69E-46
MS.gene051973	MS.gene063436	0.805029	1.63E-49	-1.69E-46
MS.gene05240	MS.gene063436	0.823834	1.12E-53	-1.69E-46
MS.gene053887	MS.gene063436	0.800953	1.13E-48	-1.69E-46
MS.gene054277	MS.gene063436	0.827416	1.58E-54	-1.69E-46
MS.gene056590	MS.gene063436	0.813068	3.09E-51	-1.69E-46
MS.gene056591	MS.gene063436	0.815246	1.02E-51	-1.69E-46
MS.gene056694	MS.gene063436	0.815056	1.12E-51	-1.69E-46
MS.gene056697	MS.gene063436	0.816433	5.55E-52	-1.69E-46
MS.gene056748	MS.gene063436	0.8013	9.61E-49	-1.69E-46
MS.gene056856	MS.gene063436	0.811453	6.95E-51	-1.69E-46
MS.gene056920	MS.gene063436	0.80208	6.65E-49	-1.69E-46
MS.gene056988	MS.gene063436	0.803189	3.93E-49	-1.69E-46
MS.gene057261	MS.gene063436	0.822517	2.27E-53	-1.69E-46
MS.gene057548	MS.gene063436	0.801419	9.09E-49	-1.69E-46
MS.gene058381	MS.gene063436	0.820201	7.77E-53	-1.69E-46
MS.gene058450	MS.gene063436	0.813254	2.81E-51	-1.69E-46
MS.gene058603	MS.gene063436	0.815184	1.05E-51	-1.69E-46
MS.gene059953	MS.gene063436	0.811961	5.39E-51	-1.69E-46
MS.gene060087	MS.gene063436	0.81809	2.35E-52	-1.69E-46
MS.gene06084	MS.gene063436	0.816642	4.98E-52	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene063436	MS.gene063431	PPI
MS.gene063437	MS.gene063436	PPI
MS.gene43462	MS.gene063436	PPI
MS.gene063436	MS.gene039174	PPI
MS.gene063436	MS.gene039181	PPI
MS.gene063436	MS.gene30529	PPI
MS.gene063436	MS.gene07192	PPI
MS.gene063436	MS.gene062844	PPI
MS.gene068681	MS.gene063436	PPI
MS.gene063436	MS.gene039180	PPI
MS.gene063436	MS.gene068678	PPI
MS.gene063436	MS.gene039179	PPI
MS.gene012776	MS.gene063436	PPI
MS.gene062848	MS.gene063436	PPI
MS.gene062847	MS.gene063436	PPI
MS.gene065582	MS.gene063436	PPI
MS.gene005621	MS.gene063436	PPI
MS.gene062849	MS.gene063436	PPI
MS.gene063436	MS.gene062846	PPI
MS.gene063436	MS.gene068679	PPI
MS.gene063436	MS.gene012777	PPI
MS.gene063436	MS.gene95066	PPI
MS.gene063436	MS.gene43463	PPI
MS.gene042063	MS.gene063436	PPI
MS.gene20711	MS.gene063436	PPI
MS.gene062850	MS.gene063436	PPI
MS.gene063436	MS.gene065585	PPI
MS.gene063436	MS.gene062845	PPI
MS.gene063436	MS.gene039178	PPI
MS.gene065586	MS.gene063436	PPI
MS.gene063436	MS.gene063432	PPI
MS.gene063436	MS.gene039175	PPI
MS.gene063436	MS.gene03034	PPI
MS.gene065587	MS.gene063436	PPI
MS.gene063436	MS.gene039177	PPI
MS.gene063430	MS.gene063436	PPI
MS.gene063436	MS.gene95067	PPI
MS.gene042064	MS.gene063436	PPI
MS.gene063436	MS.gene063433	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063436.t1	MTR_2g070200	96.833	221	6	1	1	220	1	221	8.58e-159	438
MS.gene063436.t1	MTR_2g070150	73.659	205	53	1	1	205	1	204	1.64e-116	330
MS.gene063436.t1	MTR_2g070210	69.369	222	65	2	1	220	1	221	3.27e-114	325
MS.gene063436.t1	MTR_2g070180	67.890	218	68	2	1	218	1	216	1.58e-112	321
MS.gene063436.t1	MTR_2g070140	71.078	204	58	1	17	220	1	203	1.87e-110	315
MS.gene063436.t1	MTR_2g070130	64.545	220	77	1	1	220	1	219	7.01e-109	311
MS.gene063436.t1	MTR_2g070060	58.447	219	90	1	1	219	1	218	2.05e-96	280
MS.gene063436.t1	MTR_2g070070	59.817	219	87	1	1	219	1	218	2.11e-95	278
MS.gene063436.t1	MTR_3g467420	60.648	216	84	1	5	220	10	224	2.23e-94	275
MS.gene063436.t1	MTR_8g056940	59.447	217	87	1	1	217	1	216	1.70e-91	268
MS.gene063436.t1	MTR_3g467430	61.836	207	78	1	3	209	8	213	2.38e-90	265
MS.gene063436.t1	MTR_4g124130	57.273	220	92	2	1	219	1	219	3.49e-89	262
MS.gene063436.t1	MTR_2g070120	60.000	210	83	1	1	210	1	209	5.49e-88	259
MS.gene063436.t1	MTR_2g070110	56.164	219	94	1	1	219	1	217	5.60e-88	259
MS.gene063436.t1	MTR_5g076900	46.818	220	114	3	2	220	4	221	5.38e-67	206
MS.gene063436.t1	MTR_0186s0030	61.268	142	54	1	1	142	1	141	8.70e-58	179
MS.gene063436.t1	MTR_1g090060	42.661	218	119	4	4	217	3	218	3.07e-53	171
MS.gene063436.t1	MTR_4g059730	42.081	221	120	5	1	216	1	218	4.99e-52	167
MS.gene063436.t1	MTR_1g090070	40.183	219	124	5	4	217	9	225	5.33e-50	162
MS.gene063436.t1	MTR_7g065720	41.429	210	118	4	3	209	6	213	2.43e-49	160
MS.gene063436.t1	MTR_8g087425	41.063	207	118	3	2	206	3	207	2.50e-49	160
MS.gene063436.t1	MTR_5g040430	37.736	212	124	3	2	206	5	215	4.28e-49	160
MS.gene063436.t1	MTR_5g037380	40.278	216	121	3	2	209	3	218	2.27e-48	158
MS.gene063436.t1	MTR_7g065740	41.232	211	117	5	3	209	6	213	2.12e-47	156
MS.gene063436.t1	MTR_7g065660	40.952	210	120	3	3	210	6	213	2.76e-47	155
MS.gene063436.t1	MTR_1g090100	42.584	209	114	4	5	209	3	209	7.19e-47	154
MS.gene063436.t1	MTR_3g099757	42.308	208	116	4	3	208	4	209	1.87e-46	153
MS.gene063436.t1	MTR_8g087410	41.500	200	113	3	4	201	6	203	2.05e-45	150
MS.gene063436.t1	MTR_4g019780	39.171	217	126	4	3	216	7	220	2.18e-45	150
MS.gene063436.t1	MTR_1g090090	41.743	218	121	5	4	217	3	218	6.23e-45	149
MS.gene063436.t1	MTR_7g065750	41.089	202	114	4	3	201	6	205	2.39e-44	148
MS.gene063436.t1	MTR_7g065590	39.524	210	123	3	3	210	6	213	7.59e-44	147
MS.gene063436.t1	MTR_7g065600	40.796	201	115	3	3	201	6	204	8.92e-44	146
MS.gene063436.t1	MTR_4g019790	38.942	208	123	3	4	209	7	212	1.72e-43	145
MS.gene063436.t1	MTR_6g080440	41.624	197	109	4	18	211	17	210	1.83e-43	145
MS.gene063436.t1	MTR_1g115195	41.232	211	116	6	1	206	1	208	3.06e-43	145
MS.gene063436.t1	MTR_7g065270	41.627	209	118	4	3	209	6	212	1.10e-42	144
MS.gene063436.t1	MTR_7g065265	41.627	209	118	4	3	209	6	212	2.32e-42	143
MS.gene063436.t1	MTR_7g065230	40.807	223	113	5	3	218	6	216	4.21e-42	142
MS.gene063436.t1	MTR_1g090150	38.073	218	126	6	3	215	2	215	1.19e-41	141
MS.gene063436.t1	MTR_7g065290	41.627	209	118	4	3	209	6	212	1.38e-41	141
MS.gene063436.t1	MTR_7g065710	38.647	207	123	4	1	207	1	203	1.61e-41	140
MS.gene063436.t1	MTR_7g065630	39.423	208	120	6	3	209	24	226	6.69e-41	139
MS.gene063436.t1	MTR_8g061950	38.498	213	121	4	3	206	4	215	1.24e-40	139
MS.gene063436.t1	MTR_7g065640	38.942	208	107	5	3	209	6	194	2.32e-39	134
MS.gene063436.t1	MTR_7g065700	38.278	209	125	4	1	209	4	208	2.25e-37	130
MS.gene063436.t1	MTR_7g065260	41.294	201	114	3	3	201	13	211	6.27e-37	129
MS.gene063436.t1	MTR_7g065680	38.647	207	119	5	3	207	6	206	2.54e-36	127
MS.gene063436.t1	MTR_2g072120	60.274	73	29	0	47	119	1	73	3.26e-30	107
MS.gene063436.t1	MTR_4g134380	30.588	170	102	4	4	160	15	181	1.02e-13	68.2
MS.gene063436.t1	MTR_4g134370	26.887	212	135	7	3	201	14	218	1.75e-12	64.7
MS.gene063436.t1	MTR_4g134380	29.878	164	99	4	4	154	15	175	4.60e-12	62.8
MS.gene063436.t1	MTR_1g067180	29.897	194	116	9	14	199	37	218	1.13e-11	62.4
MS.gene063436.t1	MTR_1g067180	29.442	197	119	9	11	199	31	215	1.30e-11	62.4
MS.gene063436.t1	MTR_7g100320	28.856	201	129	8	11	206	33	224	2.17e-11	61.6
MS.gene063436.t1	MTR_1g067180	32.075	159	91	7	14	166	37	184	3.30e-11	60.8
MS.gene063436.t1	MTR_4g043640	54.762	42	19	0	149	190	44	85	4.00e-11	57.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene063436.t1	AT1G17180	61.818	220	83	1	1	220	1	219	1.15e-101	293
MS.gene063436.t1	AT1G78380	62.673	217	80	1	1	217	1	216	1.44e-99	288
MS.gene063436.t1	AT1G78340	62.201	209	78	1	1	209	1	208	5.77e-97	281
MS.gene063436.t1	AT1G17170	60.455	220	85	2	1	220	1	218	1.52e-95	278
MS.gene063436.t1	AT1G78370	60.000	215	85	1	1	215	1	214	4.67e-94	274
MS.gene063436.t1	AT1G78360	60.181	221	86	2	1	220	1	220	1.20e-93	273
MS.gene063436.t1	AT1G78320	59.091	220	88	2	1	219	1	219	1.75e-92	270
MS.gene063436.t1	AT1G53680	54.795	219	98	1	3	220	6	224	2.69e-87	257
MS.gene063436.t1	AT1G17190	54.167	216	98	1	3	218	4	218	1.38e-84	250
MS.gene063436.t1	AT3G43800	51.613	217	100	4	3	215	4	219	3.39e-78	234
MS.gene063436.t1	AT1G78320	50.698	215	78	2	1	215	1	187	1.04e-70	214
MS.gene063436.t1	AT2G29420	44.344	221	119	4	2	220	7	225	1.44e-57	182
MS.gene063436.t1	AT3G09270	42.512	207	115	3	3	206	5	210	8.51e-51	164
MS.gene063436.t1	AT1G10360	42.326	215	117	3	2	209	3	217	1.62e-50	164
MS.gene063436.t1	AT1G59700	41.743	218	119	4	3	212	5	222	2.59e-47	156
MS.gene063436.t1	AT2G29490	39.336	211	119	6	3	208	6	212	6.75e-47	154
MS.gene063436.t1	AT1G10370	40.930	215	120	3	2	209	3	217	1.64e-46	154
MS.gene063436.t1	AT2G29480	39.336	211	119	6	3	208	6	212	2.01e-45	150
MS.gene063436.t1	AT2G29440	38.636	220	126	6	3	217	5	220	3.83e-45	150
MS.gene063436.t1	AT1G27130	38.140	215	125	3	3	209	5	219	1.55e-44	149
MS.gene063436.t1	AT1G74590	38.462	208	120	4	3	204	6	211	4.14e-44	147
MS.gene063436.t1	AT2G29450	38.208	212	125	4	3	210	5	214	2.44e-43	145
MS.gene063436.t1	AT2G29460	37.273	220	129	6	3	217	6	221	3.93e-43	145
MS.gene063436.t1	AT1G59670	40.278	216	121	4	3	210	5	220	7.27e-43	144
MS.gene063436.t1	AT1G69930	38.389	211	124	3	5	209	13	223	1.52e-42	144
MS.gene063436.t1	AT1G27140	37.327	217	127	3	3	210	5	221	2.01e-42	144
MS.gene063436.t1	AT5G62480	37.387	222	124	5	1	210	5	223	4.20e-42	142
MS.gene063436.t1	AT2G29470	36.530	219	129	7	5	217	8	222	2.21e-41	140
MS.gene063436.t1	AT1G69920	34.081	223	136	4	5	219	35	254	7.31e-37	129
MS.gene063436.t1	AT5G62480	30.180	222	114	6	1	210	5	197	3.09e-24	95.9
MS.gene063436.t1	AT5G62480	30.455	220	111	6	3	210	7	196	3.85e-24	95.9
MS.gene063436.t1	AT5G02780	28.351	194	126	8	11	199	37	222	3.76e-11	61.2
MS.gene063436.t1	AT5G02780	28.351	194	126	8	11	199	37	222	3.76e-11	61.2
MS.gene063436.t1	AT5G02790	31.472	197	109	10	11	199	35	213	5.00e-11	60.8
MS.gene063436.t1	AT5G02780	28.351	194	124	8	11	199	37	220	6.21e-11	60.5

Find 58 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTGGGAGACAAGGCTTATTT+TGG	0.162898	2.3:+25732121	MS.gene063436:CDS
AGAGAGCACAAGCTAGATTT+TGG	0.186476	2.3:+25731317	MS.gene063436:CDS
ACTTAATGCCTAATTTCTTT+AGG	0.190935	2.3:-25732342	None:intergenic
CTTAATGCCTAATTTCTTTA+GGG	0.237574	2.3:-25732341	None:intergenic
CATATCTATGAATTCCTTCT+TGG	0.269924	2.3:-25732077	None:intergenic
TTTGAAACATATGAGAAGTT+TGG	0.284132	2.3:+25732196	MS.gene063436:CDS
ATTACAAGTGACTCACAAAT+AGG	0.297067	2.3:-25731232	None:intergenic
GGTTTCTGGATAAGTCCTTA+TGG	0.328976	2.3:+25731070	MS.gene063436:CDS
AGTTCATTGAATGGGCTAAT+AGG	0.359818	2.3:+25732248	MS.gene063436:CDS
CATAGATATGCTCAAATTGT+TGG	0.364566	2.3:+25732090	MS.gene063436:CDS
AAGCTGGAAGGAAAGTTTAT+AGG	0.375912	2.3:+25732026	MS.gene063436:CDS
AAGAATAGCACTTGCTGAAA+AGG	0.392269	2.3:+25731102	MS.gene063436:CDS
GCAGATGCCCTAAAGAAATT+AGG	0.402688	2.3:+25732334	MS.gene063436:CDS
TTGCCATTGTGGATTAGAAC+CGG	0.405758	2.3:-25731208	None:intergenic
CACAAATAGGTTTGCCATTG+TGG	0.406278	2.3:-25731219	None:intergenic
ATAGAGATGCAAGGGAGAAT+TGG	0.406692	2.3:+25731146	MS.gene063436:CDS
ATTAGCCCATTCAATGAACT+TGG	0.407359	2.3:-25732245	None:intergenic
AAAATCTAGCTTGTGCTCTC+TGG	0.411980	2.3:-25731315	None:intergenic
TCGTAGACCTTATGCTGGTT+AGG	0.419263	2.3:-25732304	None:intergenic
TTGAGTATATTGATGAGGTT+TGG	0.428745	2.3:+25731257	MS.gene063436:CDS
TGGAGGAGACAGACTTGGTT+TGG	0.440850	2.3:+25732141	MS.gene063436:CDS
GGCACTCAATCTCTATATTG+AGG	0.449276	2.3:-25732222	None:intergenic
GTTTCAAACCAACTGTAGAA+TGG	0.455904	2.3:-25732181	None:intergenic
TTTCAAACCAACTGTAGAAT+GGG	0.460044	2.3:-25732180	None:intergenic
ATTCTTGCTCTCATTCCATA+AGG	0.463260	2.3:-25731085	None:intergenic
GGCTGACTATGTTGATAAAA+CGG	0.464640	2.3:+25731339	MS.gene063436:CDS
CAAATTGTTGGAGAAACAGC+TGG	0.465628	2.3:+25732102	MS.gene063436:CDS
CCCTAGTCCCATTCTACAGT+TGG	0.473896	2.3:+25732173	MS.gene063436:CDS
GTGCCCCAAGTTCATTGAAT+GGG	0.489598	2.3:+25732240	MS.gene063436:CDS
GTCTCTTCCTAACCAGCATA+AGG	0.491160	2.3:+25732297	MS.gene063436:CDS
AGAATAGCACTTGCTGAAAA+GGG	0.508569	2.3:+25731103	MS.gene063436:CDS
AGTGCCCCAAGTTCATTGAA+TGG	0.509213	2.3:+25732239	MS.gene063436:CDS
GGGTTCATTTGTAGAAGATA+AGG	0.510488	2.3:-25731169	None:intergenic
TTAGCCCATTCAATGAACTT+GGG	0.515536	2.3:-25732244	None:intergenic
CTAGCTTGTGCTCTCTGGTA+GGG	0.530129	2.3:-25731310	None:intergenic
AGAACAAGAAGCTGCCAAGA+AGG	0.534444	2.3:+25732063	MS.gene063436:CDS
TGTCAATAGATATATGAAGC+TGG	0.543339	2.3:+25732010	MS.gene063436:intron
GTATATTGATGAGGTTTGGA+AGG	0.548215	2.3:+25731261	MS.gene063436:CDS
GTTCATAGATAGAGATGCAA+GGG	0.548817	2.3:+25731138	MS.gene063436:CDS
TGCCATTGTGGATTAGAACC+GGG	0.551246	2.3:-25731207	None:intergenic
TCTAGCTTGTGCTCTCTGGT+AGG	0.552026	2.3:-25731311	None:intergenic
CTACCAAGTCATGGCTGATG+AGG	0.563594	2.3:+25731036	None:intergenic
CCAAGTCATGGCTGATGAGG+TGG	0.571685	2.3:+25731039	None:intergenic
TAGCCCATTCAATGAACTTG+GGG	0.580169	2.3:-25732243	None:intergenic
CCCGGTTCACAAGAAAATCC+CGG	0.589293	2.3:+25731189	MS.gene063436:CDS
GGAGAAACAGCTGGGAGACA+AGG	0.589733	2.3:+25732111	MS.gene063436:CDS
AATAGATATATGAAGCTGGA+AGG	0.589985	2.3:+25732014	MS.gene063436:intron
CCAACTGTAGAATGGGACTA+GGG	0.601552	2.3:-25732173	None:intergenic
GCTCTCTGGTAGGGATCAGA+AGG	0.603013	2.3:-25731301	None:intergenic
ATGCTGGTTAGGAAGAGACT+TGG	0.605348	2.3:-25732293	None:intergenic
AGTTCATAGATAGAGATGCA+AGG	0.614971	2.3:+25731137	MS.gene063436:CDS
ACCAACTGTAGAATGGGACT+AGG	0.615269	2.3:-25732174	None:intergenic
TGAACTCGTAGACCTTATGC+TGG	0.626524	2.3:-25732309	None:intergenic
AAATTGTTGGAGAAACAGCT+GGG	0.647590	2.3:+25732103	MS.gene063436:CDS
TTATCTTCTACAAATGAACC+CGG	0.663975	2.3:+25731171	MS.gene063436:CDS
AATTGTTGAGTATATTGATG+AGG	0.670411	2.3:+25731252	MS.gene063436:CDS
TAGGGATCAGAAGGCAACAA+CGG	0.683708	2.3:-25731292	None:intergenic
ATCCCGGTTCTAATCCACAA+TGG	0.688019	2.3:+25731205	MS.gene063436:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAATATTTGTAAAATATGT+AGG	-	chr2.3:25731748-25731767	None:intergenic	10.0%
!!	AAGAAACAAATAATAAATAT+TGG	-	chr2.3:25731612-25731631	None:intergenic	10.0%
!!!	TATCAATTTTGATATTTAAT+CGG	+	chr2.3:25731496-25731515	MS.gene063436:intron	10.0%
!!!	TTTCTTTAATTTTTTTAAAG+AGG	+	chr2.3:25731626-25731645	MS.gene063436:intron	10.0%
!!	AACAAATAATAAATATTGGA+TGG	-	chr2.3:25731608-25731627	None:intergenic	15.0%
!!	GGATTAAAAATTTATTGAAT+GGG	+	chr2.3:25731783-25731802	MS.gene063436:intron	15.0%
!!	TGGATTAAAAATTTATTGAA+TGG	+	chr2.3:25731782-25731801	MS.gene063436:intron	15.0%
!!!	TTTAATTTTTTTAAAGAGGA+AGG	+	chr2.3:25731630-25731649	MS.gene063436:intron	15.0%
!!	AATGTAATTTGATATTGAGT+AGG	-	chr2.3:25731820-25731839	None:intergenic	20.0%
!!	AATTTCAGTAAAAGTTGTTA+AGG	+	chr2.3:25731913-25731932	MS.gene063436:intron	20.0%
!!	TACTCAATATCAAATTACAT+TGG	+	chr2.3:25731819-25731838	MS.gene063436:intron	20.0%
!!!	AATAAATTTTTAATCCAACG+AGG	-	chr2.3:25731779-25731798	None:intergenic	20.0%
!	AAAGTTTATAGGACCAAAAA+AGG	+	chr2.3:25732037-25732056	MS.gene063436:CDS	25.0%
!	AATTAACACCCAAAATTAGT+TGG	-	chr2.3:25731985-25732004	None:intergenic	25.0%
!	AATTGTTGAGTATATTGATG+AGG	+	chr2.3:25731252-25731271	MS.gene063436:CDS	25.0%
!	ACTTAATGCCTAATTTCTTT+AGG	-	chr2.3:25732345-25732364	None:intergenic	25.0%
!	CTTAATGCCTAATTTCTTTA+GGG	-	chr2.3:25732344-25732363	None:intergenic	25.0%
!	TTTATTGAATGGGTCTAATA+TGG	+	chr2.3:25731793-25731812	MS.gene063436:intron	25.0%
!!	CTTTCATCAATCTCTATTTT+AGG	+	chr2.3:25731570-25731589	MS.gene063436:intron	25.0%
!!	TTTGAAACATATGAGAAGTT+TGG	+	chr2.3:25732196-25732215	MS.gene063436:CDS	25.0%
!!!	TCAATCTCTATTTTAGGTTT+TGG	+	chr2.3:25731576-25731595	MS.gene063436:intron	25.0%
!!!	TGTTGTTTCCAACTAATTTT+GGG	+	chr2.3:25731974-25731993	MS.gene063436:intron	25.0%
	AATAGATATATGAAGCTGGA+AGG	+	chr2.3:25732014-25732033	MS.gene063436:intron	30.0%
	ATTACAAGTGACTCACAAAT+AGG	-	chr2.3:25731235-25731254	None:intergenic	30.0%
	CATAGATATGCTCAAATTGT+TGG	+	chr2.3:25732090-25732109	MS.gene063436:CDS	30.0%
	CATATCTATGAATTCCTTCT+TGG	-	chr2.3:25732080-25732099	None:intergenic	30.0%
	GAGAAGACATCAAATTACAT+TGG	+	chr2.3:25731683-25731702	MS.gene063436:intron	30.0%
	GATATTTAATCGGTTGAGTT+AGG	+	chr2.3:25731506-25731525	MS.gene063436:intron	30.0%
	TGTAGGCAAAAATAAGTTAC+TGG	-	chr2.3:25731731-25731750	None:intergenic	30.0%
	TGTCAATAGATATATGAAGC+TGG	+	chr2.3:25732010-25732029	MS.gene063436:intron	30.0%
	TTATCTTCTACAAATGAACC+CGG	+	chr2.3:25731171-25731190	MS.gene063436:CDS	30.0%
	TTGAGTATATTGATGAGGTT+TGG	+	chr2.3:25731257-25731276	MS.gene063436:CDS	30.0%
	TTTCAAACCAACTGTAGAAT+GGG	-	chr2.3:25732183-25732202	None:intergenic	30.0%
!	TATTTTACAAAACTCCTCGT+TGG	+	chr2.3:25731762-25731781	MS.gene063436:intron	30.0%
!	TGATGTACAAACTTTTGCAT+CGG	-	chr2.3:25731865-25731884	None:intergenic	30.0%
!!!	GTGTTGTTTCCAACTAATTT+TGG	+	chr2.3:25731973-25731992	MS.gene063436:intron	30.0%
!!!	TTCTTGTTCTTCTCCTTTTT+TGG	-	chr2.3:25732053-25732072	None:intergenic	30.0%
	AAATTGTTGGAGAAACAGCT+GGG	+	chr2.3:25732103-25732122	MS.gene063436:CDS	35.0%
	AAGCTGGAAGGAAAGTTTAT+AGG	+	chr2.3:25732026-25732045	MS.gene063436:CDS	35.0%
	AGTTCATAGATAGAGATGCA+AGG	+	chr2.3:25731137-25731156	MS.gene063436:CDS	35.0%
	ATTAGCCCATTCAATGAACT+TGG	-	chr2.3:25732248-25732267	None:intergenic	35.0%
	ATTCTTGCTCTCATTCCATA+AGG	-	chr2.3:25731088-25731107	None:intergenic	35.0%
	CAAGAATGAGAAACGTACAT+AGG	-	chr2.3:25731952-25731971	None:intergenic	35.0%
	GGGTTCATTTGTAGAAGATA+AGG	-	chr2.3:25731172-25731191	None:intergenic	35.0%
	GTATATTGATGAGGTTTGGA+AGG	+	chr2.3:25731261-25731280	MS.gene063436:CDS	35.0%
	GTTCATAGATAGAGATGCAA+GGG	+	chr2.3:25731138-25731157	MS.gene063436:CDS	35.0%
	GTTTCAAACCAACTGTAGAA+TGG	-	chr2.3:25732184-25732203	None:intergenic	35.0%
	TTAGCCCATTCAATGAACTT+GGG	-	chr2.3:25732247-25732266	None:intergenic	35.0%
	TTGAAACTCACATACACAAG+TGG	+	chr2.3:25731446-25731465	MS.gene063436:intron	35.0%
!	AAGAATAGCACTTGCTGAAA+AGG	+	chr2.3:25731102-25731121	MS.gene063436:CDS	35.0%
!	AGAATAGCACTTGCTGAAAA+GGG	+	chr2.3:25731103-25731122	MS.gene063436:CDS	35.0%
!	GGCTGACTATGTTGATAAAA+CGG	+	chr2.3:25731339-25731358	MS.gene063436:CDS	35.0%
!!	AGTTCATTGAATGGGCTAAT+AGG	+	chr2.3:25732248-25732267	MS.gene063436:CDS	35.0%
!!!	CTCTATTTTAGGTTTTGGTG+TGG	+	chr2.3:25731581-25731600	MS.gene063436:intron	35.0%
	AACTCACATACACAAGTGGA+AGG	+	chr2.3:25731450-25731469	MS.gene063436:intron	40.0%
	ATAGAGATGCAAGGGAGAAT+TGG	+	chr2.3:25731146-25731165	MS.gene063436:CDS	40.0%
	CAAATTGTTGGAGAAACAGC+TGG	+	chr2.3:25732102-25732121	MS.gene063436:CDS	40.0%
	CACAAATAGGTTTGCCATTG+TGG	-	chr2.3:25731222-25731241	None:intergenic	40.0%
	GCAGATGCCCTAAAGAAATT+AGG	+	chr2.3:25732334-25732353	MS.gene063436:CDS	40.0%
	GGCACTCAATCTCTATATTG+AGG	-	chr2.3:25732225-25732244	None:intergenic	40.0%
	TAGCCCATTCAATGAACTTG+GGG	-	chr2.3:25732246-25732265	None:intergenic	40.0%
!	AAAATCTAGCTTGTGCTCTC+TGG	-	chr2.3:25731318-25731337	None:intergenic	40.0%
!	GGTTTCTGGATAAGTCCTTA+TGG	+	chr2.3:25731070-25731089	MS.gene063436:CDS	40.0%
!!	AGAGAGCACAAGCTAGATTT+TGG	+	chr2.3:25731317-25731336	MS.gene063436:CDS	40.0%
!!	GAGAGCACAAGCTAGATTTT+GGG	+	chr2.3:25731318-25731337	MS.gene063436:CDS	40.0%
!!	TATTTTGGAGGAGACAGACT+TGG	+	chr2.3:25732136-25732155	MS.gene063436:CDS	40.0%
!!	TTGCCATTGTGGATTAGAAC+CGG	-	chr2.3:25731211-25731230	None:intergenic	40.0%
!!!	AGGTGGTTTTGTTAGGTTTC+TGG	+	chr2.3:25731056-25731075	MS.gene063436:CDS	40.0%
	ACATACACAAGTGGAAGGAC+GGG	+	chr2.3:25731455-25731474	MS.gene063436:intron	45.0%
	ACCAACTGTAGAATGGGACT+AGG	-	chr2.3:25732177-25732196	None:intergenic	45.0%
	AGAACAAGAAGCTGCCAAGA+AGG	+	chr2.3:25732063-25732082	MS.gene063436:CDS	45.0%
	AGTGCCCCAAGTTCATTGAA+TGG	+	chr2.3:25732239-25732258	MS.gene063436:CDS	45.0%
	CACATACACAAGTGGAAGGA+CGG	+	chr2.3:25731454-25731473	MS.gene063436:intron	45.0%
	CCAACTGTAGAATGGGACTA+GGG	-	chr2.3:25732176-25732195	None:intergenic	45.0%
	GTCTCTTCCTAACCAGCATA+AGG	+	chr2.3:25732297-25732316	MS.gene063436:CDS	45.0%
	GTGCCCCAAGTTCATTGAAT+GGG	+	chr2.3:25732240-25732259	MS.gene063436:CDS	45.0%
	TAGGGATCAGAAGGCAACAA+CGG	-	chr2.3:25731295-25731314	None:intergenic	45.0%
	TGAACTCGTAGACCTTATGC+TGG	-	chr2.3:25732312-25732331	None:intergenic	45.0%
!	ACCGGGATTTTCTTGTGAAC+CGG	-	chr2.3:25731193-25731212	None:intergenic	45.0%
!	ATCCCGGTTCTAATCCACAA+TGG	+	chr2.3:25731205-25731224	MS.gene063436:CDS	45.0%
!	ATGCTGGTTAGGAAGAGACT+TGG	-	chr2.3:25732296-25732315	None:intergenic	45.0%
!	CTGGGAGACAAGGCTTATTT+TGG	+	chr2.3:25732121-25732140	MS.gene063436:CDS	45.0%
!	TCGTAGACCTTATGCTGGTT+AGG	-	chr2.3:25732307-25732326	None:intergenic	45.0%
!!	TGCCATTGTGGATTAGAACC+GGG	-	chr2.3:25731210-25731229	None:intergenic	45.0%
!!!	GCTGATGAGGTGGTTTTGTT+AGG	+	chr2.3:25731049-25731068	MS.gene063436:CDS	45.0%
!!!	GGAGACAAGGCTTATTTTGG+AGG	+	chr2.3:25732124-25732143	MS.gene063436:CDS	45.0%
	CCCGGTTCACAAGAAAATCC+CGG	+	chr2.3:25731189-25731208	MS.gene063436:CDS	50.0%
	CCCTAGTCCCATTCTACAGT+TGG	+	chr2.3:25732173-25732192	MS.gene063436:CDS	50.0%
!	CCGGGATTTTCTTGTGAACC+GGG	-	chr2.3:25731192-25731211	None:intergenic	50.0%
!	CTAGCTTGTGCTCTCTGGTA+GGG	-	chr2.3:25731313-25731332	None:intergenic	50.0%
!	TCTAGCTTGTGCTCTCTGGT+AGG	-	chr2.3:25731314-25731333	None:intergenic	50.0%
!	TGGAGGAGACAGACTTGGTT+TGG	+	chr2.3:25732141-25732160	MS.gene063436:CDS	50.0%
	GCTCTCTGGTAGGGATCAGA+AGG	-	chr2.3:25731304-25731323	None:intergenic	55.0%
	GGAGAAACAGCTGGGAGACA+AGG	+	chr2.3:25732111-25732130	MS.gene063436:CDS	55.0%
	TACACAAGTGGAAGGACGGG+TGG	+	chr2.3:25731458-25731477	MS.gene063436:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.3	gene	25731046	25732366	25731046	ID=MS.gene063436
chr2.3	mRNA	25731046	25732366	25731046	ID=MS.gene063436.t1;Parent=MS.gene063436
chr2.3	exon	25731046	25731360	25731046	ID=MS.gene063436.t1.exon1;Parent=MS.gene063436.t1
chr2.3	CDS	25731046	25731360	25731046	ID=cds.MS.gene063436.t1;Parent=MS.gene063436.t1
chr2.3	exon	25732019	25732366	25732019	ID=MS.gene063436.t1.exon2;Parent=MS.gene063436.t1
chr2.3	CDS	25732019	25732366	25732019	ID=cds.MS.gene063436.t1;Parent=MS.gene063436.t1

Gene Sequence

>MS.gene063436

ATGGCTGATGAGGTGGTTTTGTTAGGTTTCTGGATAAGTCCTTATGGAATGAGAGCAAGAATAGCACTTGCTGAAAAGGGTGTCAAGTATGAGTTCATAGATAGAGATGCAAGGGAGAATTGGCCTTATCTTCTACAAATGAACCCGGTTCACAAGAAAATCCCGGTTCTAATCCACAATGGCAAACCTATTTGTGAGTCACTTGTAATTGTTGAGTATATTGATGAGGTTTGGAAGGATAGATCTCCGTTGTTGCCTTCTGATCCCTACCAGAGAGCACAAGCTAGATTTTGGGCTGACTATGTTGATAAAACGGTATATAATCATAAGAGTCTTCAATTTTTATTTTTTTTGACTCGTATATTTTTTTTCTGTACATAGACGAAATGACATATAACTATTGAAACTCACATACACAAGTGGAAGGACGGGTGGTCATAGCATCTGACTTATCAATTTTGATATTTAATCGGTTGAGTTAGGACATGTGAACTGACACGTAAATTCAATCTTGCTAAATTATGCTTTCATCAATCTCTATTTTAGGTTTTGGTGTGGTCCATCCAATATTTATTATTTGTTTCTTTAATTTTTTTAAAGAGGAAGGAAATTTATTACTATTTTTAAAATAGTTTATGAGAAGACATCAAATTACATTGGTGTAACTTAATAGTTACACTGTCCAGTAACTTATTTTTGCCTACATATTTTACAAATATTTTACAAAACTCCTCGTTGGATTAAAAATTTATTGAATGGGTCTAATATGGACCTACTCAATATCAAATTACATTGGTGTAAACATTTTTGTAAGTTCCGATGCAAAAGTTTGTACATCATCAGTATTTTTTGTATTATCAAATCTACAATTTCAGTAAAAGTTGTTAAGGTCGATCTTTGACTCCTATGTACGTTTCTCATTCTTGCGTGTTGTTTCCAACTAATTTTGGGTGTTAATTATCAATGTCAATAGATATATGAAGCTGGAAGGAAAGTTTATAGGACCAAAAAAGGAGAAGAACAAGAAGCTGCCAAGAAGGAATTCATAGATATGCTCAAATTGTTGGAGAAACAGCTGGGAGACAAGGCTTATTTTGGAGGAGACAGACTTGGTTTGGTAGATATAGCCCTAGTCCCATTCTACAGTTGGTTTGAAACATATGAGAAGTTTGGAAACCTCAATATAGAGATTGAGTGCCCCAAGTTCATTGAATGGGCTAATAGGTGCATGCAGATTGAGAGTGTTTCCAAGTCTCTTCCTAACCAGCATAAGGTCTACGAGTTCATTGCAGATGCCCTAAAGAAATTAGGCATTAAGTAG

Protein sequence

>MS.gene063436.t1

MADEVVLLGFWISPYGMRARIALAEKGVKYEFIDRDARENWPYLLQMNPVHKKIPVLIHNGKPICESLVIVEYIDEVWKDRSPLLPSDPYQRAQARFWADYVDKTIYEAGRKVYRTKKGEEQEAAKKEFIDMLKLLEKQLGDKAYFGGDRLGLVDIALVPFYSWFETYEKFGNLNIEIECPKFIEWANRCMQIESVSKSLPNQHKVYEFIADALKKLGIK