Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74302.t1 | XP_003599084.1 | 95 | 444 | 21 | 1 | 1 | 444 | 1 | 443 | 1.90E-236 | 828.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74302.t1 | Q8GWW8 | 57.9 | 461 | 169 | 9 | 1 | 442 | 1 | 455 | 2.3e-134 | 480.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74302.t1 | G7IWH6 | 95.0 | 444 | 21 | 1 | 1 | 444 | 1 | 443 | 1.3e-236 | 828.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049378 | MS.gene74302 | 0.80066 | 1.30E-48 | -1.69E-46 |
MS.gene049825 | MS.gene74302 | 0.801804 | 7.58E-49 | -1.69E-46 |
MS.gene050227 | MS.gene74302 | 0.811678 | 6.21E-51 | -1.69E-46 |
MS.gene050228 | MS.gene74302 | 0.810708 | 1.01E-50 | -1.69E-46 |
MS.gene050303 | MS.gene74302 | 0.834158 | 3.52E-56 | -1.69E-46 |
MS.gene050330 | MS.gene74302 | -0.80447 | 2.13E-49 | -1.69E-46 |
MS.gene050623 | MS.gene74302 | -0.806142 | 9.49E-50 | -1.69E-46 |
MS.gene050642 | MS.gene74302 | 0.821286 | 4.38E-53 | -1.69E-46 |
MS.gene051983 | MS.gene74302 | 0.824576 | 7.49E-54 | -1.69E-46 |
MS.gene052176 | MS.gene74302 | 0.862821 | 3.86E-64 | -1.69E-46 |
MS.gene052190 | MS.gene74302 | 0.824313 | 8.64E-54 | -1.69E-46 |
MS.gene052309 | MS.gene74302 | -0.818381 | 2.02E-52 | -1.69E-46 |
MS.gene052358 | MS.gene74302 | -0.813273 | 2.78E-51 | -1.69E-46 |
MS.gene052389 | MS.gene74302 | 0.806062 | 9.87E-50 | -1.69E-46 |
MS.gene052600 | MS.gene74302 | 0.818057 | 2.39E-52 | -1.69E-46 |
MS.gene052926 | MS.gene74302 | 0.818931 | 1.52E-52 | -1.69E-46 |
MS.gene052954 | MS.gene74302 | 0.809774 | 1.60E-50 | -1.69E-46 |
MS.gene053006 | MS.gene74302 | 0.80632 | 8.71E-50 | -1.69E-46 |
MS.gene053054 | MS.gene74302 | -0.819642 | 1.04E-52 | -1.69E-46 |
MS.gene053188 | MS.gene74302 | 0.801226 | 9.95E-49 | -1.69E-46 |
MS.gene054657 | MS.gene74302 | 0.804425 | 2.17E-49 | -1.69E-46 |
MS.gene055701 | MS.gene74302 | 0.802565 | 5.28E-49 | -1.69E-46 |
MS.gene056087 | MS.gene74302 | 0.816704 | 4.82E-52 | -1.69E-46 |
MS.gene056506 | MS.gene74302 | 0.844855 | 5.84E-59 | -1.69E-46 |
MS.gene056979 | MS.gene74302 | 0.807473 | 4.97E-50 | -1.69E-46 |
MS.gene057026 | MS.gene74302 | 0.810507 | 1.11E-50 | -1.69E-46 |
MS.gene057060 | MS.gene74302 | 0.814706 | 1.34E-51 | -1.69E-46 |
MS.gene057079 | MS.gene74302 | 0.810765 | 9.79E-51 | -1.69E-46 |
MS.gene057555 | MS.gene74302 | 0.804182 | 2.44E-49 | -1.69E-46 |
MS.gene05795 | MS.gene74302 | 0.808444 | 3.09E-50 | -1.69E-46 |
MS.gene058498 | MS.gene74302 | 0.815691 | 8.12E-52 | -1.69E-46 |
MS.gene05954 | MS.gene74302 | 0.824403 | 8.23E-54 | -1.69E-46 |
MS.gene059710 | MS.gene74302 | 0.806816 | 6.85E-50 | -1.69E-46 |
MS.gene060297 | MS.gene74302 | 0.812176 | 4.84E-51 | -1.69E-46 |
MS.gene060572 | MS.gene74302 | 0.846091 | 2.70E-59 | -1.69E-46 |
MS.gene060879 | MS.gene74302 | 0.822867 | 1.88E-53 | -1.69E-46 |
MS.gene061040 | MS.gene74302 | -0.85416 | 1.48E-61 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene74302 | MS.gene30955 | PPI |
MS.gene74302 | MS.gene64132 | PPI |
MS.gene74302 | MS.gene071169 | PPI |
MS.gene74302 | MS.gene045133 | PPI |
MS.gene74302 | MS.gene75493 | PPI |
MS.gene74302 | MS.gene050058 | PPI |
MS.gene74302 | MS.gene31156 | PPI |
MS.gene74302 | MS.gene41176 | PPI |
MS.gene74302 | MS.gene052188 | PPI |
MS.gene74302 | MS.gene052122 | PPI |
MS.gene74302 | MS.gene45489 | PPI |
MS.gene74302 | MS.gene004045 | PPI |
MS.gene021114 | MS.gene74302 | PPI |
MS.gene74302 | MS.gene010151 | PPI |
MS.gene74302 | MS.gene043886 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74302.t1 | MTR_3g027580 | 96.847 | 444 | 13 | 1 | 1 | 444 | 1 | 443 | 0.0 | 883 |
MS.gene74302.t1 | MTR_4g023470 | 66.444 | 450 | 135 | 7 | 1 | 443 | 1 | 441 | 0.0 | 563 |
MS.gene74302.t1 | MTR_4g023490 | 56.649 | 376 | 136 | 8 | 84 | 442 | 11 | 376 | 1.18e-132 | 387 |
MS.gene74302.t1 | MTR_5g065160 | 42.033 | 364 | 198 | 4 | 73 | 429 | 69 | 426 | 6.34e-90 | 280 |
MS.gene74302.t1 | MTR_5g065160 | 42.033 | 364 | 198 | 4 | 73 | 429 | 69 | 426 | 8.35e-90 | 281 |
MS.gene74302.t1 | MTR_5g065160 | 42.033 | 364 | 198 | 4 | 73 | 429 | 62 | 419 | 9.56e-90 | 280 |
MS.gene74302.t1 | MTR_5g065160 | 42.090 | 354 | 194 | 3 | 83 | 429 | 76 | 425 | 2.66e-89 | 278 |
MS.gene74302.t1 | MTR_3g087030 | 39.257 | 377 | 196 | 10 | 74 | 427 | 61 | 427 | 3.46e-71 | 231 |
MS.gene74302.t1 | MTR_2g104030 | 31.818 | 374 | 219 | 6 | 78 | 425 | 59 | 422 | 5.81e-57 | 196 |
MS.gene74302.t1 | MTR_6g471050 | 31.737 | 334 | 196 | 7 | 115 | 425 | 7 | 331 | 6.54e-43 | 157 |
MS.gene74302.t1 | MTR_8g006430 | 33.908 | 348 | 187 | 16 | 90 | 411 | 15 | 345 | 9.64e-42 | 153 |
MS.gene74302.t1 | MTR_2g087660 | 33.058 | 363 | 216 | 14 | 80 | 423 | 1 | 355 | 2.10e-33 | 130 |
MS.gene74302.t1 | MTR_2g087660 | 34.713 | 314 | 181 | 12 | 80 | 377 | 1 | 306 | 4.49e-31 | 122 |
MS.gene74302.t1 | MTR_4g050420 | 31.534 | 352 | 218 | 13 | 80 | 415 | 1 | 345 | 5.18e-31 | 124 |
MS.gene74302.t1 | MTR_7g109340 | 28.977 | 352 | 208 | 8 | 83 | 423 | 20 | 340 | 4.02e-29 | 117 |
MS.gene74302.t1 | MTR_4g078850 | 30.000 | 350 | 209 | 12 | 89 | 419 | 4 | 336 | 1.21e-24 | 104 |
MS.gene74302.t1 | MTR_2g090705 | 28.024 | 339 | 221 | 6 | 89 | 419 | 4 | 327 | 1.86e-24 | 103 |
MS.gene74302.t1 | MTR_4g015840 | 29.395 | 347 | 210 | 9 | 89 | 419 | 4 | 331 | 7.73e-24 | 102 |
MS.gene74302.t1 | MTR_3g108020 | 25.948 | 343 | 214 | 8 | 89 | 419 | 4 | 318 | 7.15e-23 | 99.4 |
MS.gene74302.t1 | MTR_2g014470 | 46.296 | 108 | 51 | 3 | 89 | 189 | 4 | 111 | 2.47e-18 | 86.3 |
MS.gene74302.t1 | MTR_2g014480 | 26.575 | 365 | 205 | 12 | 89 | 420 | 4 | 338 | 6.25e-18 | 85.1 |
MS.gene74302.t1 | MTR_5g004570 | 42.424 | 99 | 51 | 1 | 89 | 187 | 6 | 98 | 7.71e-17 | 80.1 |
MS.gene74302.t1 | MTR_1g110310 | 51.948 | 77 | 36 | 1 | 83 | 158 | 9 | 85 | 2.68e-16 | 80.9 |
MS.gene74302.t1 | MTR_8g037810 | 42.857 | 98 | 50 | 1 | 90 | 187 | 7 | 98 | 6.23e-16 | 79.0 |
MS.gene74302.t1 | MTR_1g029470 | 42.424 | 99 | 51 | 2 | 89 | 187 | 6 | 98 | 8.75e-16 | 79.0 |
MS.gene74302.t1 | MTR_1g105540 | 54.667 | 75 | 30 | 3 | 89 | 160 | 35 | 108 | 1.18e-15 | 77.8 |
MS.gene74302.t1 | MTR_7g092380 | 56.716 | 67 | 29 | 0 | 88 | 154 | 21 | 87 | 1.76e-15 | 76.6 |
MS.gene74302.t1 | MTR_7g101070 | 57.576 | 66 | 27 | 1 | 88 | 152 | 357 | 422 | 3.02e-15 | 78.2 |
MS.gene74302.t1 | MTR_1g029460 | 45.652 | 92 | 47 | 2 | 89 | 178 | 6 | 96 | 3.80e-15 | 77.4 |
MS.gene74302.t1 | MTR_5g035770 | 34.752 | 141 | 84 | 2 | 77 | 217 | 13 | 145 | 6.61e-15 | 76.6 |
MS.gene74302.t1 | MTR_1g052110 | 53.846 | 65 | 30 | 0 | 90 | 154 | 39 | 103 | 2.53e-13 | 70.5 |
MS.gene74302.t1 | MTR_5g065860 | 45.312 | 64 | 35 | 0 | 88 | 151 | 47 | 110 | 4.17e-13 | 67.0 |
MS.gene74302.t1 | MTR_7g112360 | 46.970 | 66 | 31 | 1 | 90 | 151 | 17 | 82 | 5.23e-13 | 65.9 |
MS.gene74302.t1 | MTR_7g112360 | 46.970 | 66 | 31 | 1 | 90 | 151 | 17 | 82 | 3.00e-12 | 65.1 |
MS.gene74302.t1 | MTR_8g022310 | 47.126 | 87 | 39 | 2 | 87 | 167 | 8 | 93 | 6.00e-12 | 65.1 |
MS.gene74302.t1 | MTR_7g069480 | 50.000 | 68 | 33 | 1 | 89 | 156 | 27 | 93 | 6.16e-12 | 67.8 |
MS.gene74302.t1 | MTR_8g022310 | 34.868 | 152 | 74 | 4 | 87 | 221 | 8 | 151 | 1.07e-11 | 64.3 |
MS.gene74302.t1 | MTR_8g022310 | 34.868 | 152 | 74 | 4 | 87 | 221 | 8 | 151 | 1.49e-11 | 63.9 |
MS.gene74302.t1 | MTR_7g085600 | 45.205 | 73 | 36 | 2 | 89 | 158 | 54 | 125 | 1.87e-11 | 65.1 |
MS.gene74302.t1 | MTR_2g097690 | 45.946 | 74 | 34 | 2 | 78 | 151 | 69 | 136 | 1.88e-11 | 63.5 |
MS.gene74302.t1 | MTR_6g027110 | 43.243 | 74 | 37 | 1 | 89 | 157 | 2 | 75 | 1.96e-11 | 62.0 |
MS.gene74302.t1 | MTR_8g022310 | 47.126 | 87 | 39 | 2 | 87 | 167 | 8 | 93 | 2.27e-11 | 63.9 |
MS.gene74302.t1 | MTR_2g435450 | 37.895 | 95 | 57 | 2 | 89 | 182 | 39 | 132 | 6.42e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74302.t1 | AT5G48030 | 58.495 | 465 | 160 | 10 | 1 | 442 | 1 | 455 | 0.0 | 513 |
MS.gene74302.t1 | AT1G28210 | 37.209 | 387 | 219 | 6 | 63 | 429 | 5 | 387 | 4.35e-85 | 266 |
MS.gene74302.t1 | AT1G28210 | 37.209 | 387 | 219 | 6 | 63 | 429 | 5 | 387 | 4.58e-85 | 266 |
MS.gene74302.t1 | AT1G28210 | 37.209 | 387 | 219 | 6 | 63 | 429 | 5 | 387 | 1.16e-84 | 266 |
MS.gene74302.t1 | AT2G22360 | 40.678 | 354 | 182 | 6 | 89 | 425 | 86 | 428 | 1.60e-73 | 238 |
MS.gene74302.t1 | AT4G39960 | 40.055 | 362 | 180 | 8 | 89 | 425 | 85 | 434 | 1.34e-70 | 230 |
MS.gene74302.t1 | AT4G39960 | 40.055 | 362 | 180 | 8 | 89 | 425 | 85 | 434 | 1.34e-70 | 230 |
MS.gene74302.t1 | AT1G80030 | 33.425 | 362 | 207 | 6 | 89 | 425 | 75 | 427 | 1.23e-58 | 200 |
MS.gene74302.t1 | AT1G80030 | 33.425 | 362 | 207 | 6 | 89 | 425 | 75 | 427 | 1.28e-58 | 200 |
MS.gene74302.t1 | AT1G80030 | 33.425 | 362 | 207 | 6 | 89 | 425 | 75 | 427 | 1.28e-58 | 200 |
MS.gene74302.t1 | AT1G80030 | 33.425 | 362 | 207 | 6 | 89 | 425 | 75 | 427 | 1.28e-58 | 200 |
MS.gene74302.t1 | AT3G17830 | 35.393 | 356 | 210 | 5 | 89 | 425 | 63 | 417 | 8.35e-58 | 198 |
MS.gene74302.t1 | AT5G22060 | 31.250 | 352 | 214 | 13 | 90 | 423 | 15 | 356 | 9.17e-35 | 134 |
MS.gene74302.t1 | AT3G44110 | 32.378 | 349 | 213 | 13 | 90 | 423 | 15 | 355 | 7.78e-32 | 126 |
MS.gene74302.t1 | AT3G62600 | 28.857 | 350 | 205 | 8 | 88 | 424 | 25 | 343 | 9.09e-31 | 121 |
MS.gene74302.t1 | AT3G44110 | 33.981 | 309 | 166 | 12 | 90 | 377 | 15 | 306 | 2.19e-29 | 117 |
MS.gene74302.t1 | AT2G20560 | 28.363 | 342 | 218 | 7 | 89 | 419 | 4 | 329 | 2.30e-25 | 106 |
MS.gene74302.t1 | AT5G01390 | 29.155 | 343 | 211 | 10 | 89 | 419 | 4 | 326 | 4.02e-25 | 105 |
MS.gene74302.t1 | AT1G59725 | 27.666 | 347 | 206 | 10 | 89 | 419 | 4 | 321 | 1.44e-24 | 104 |
MS.gene74302.t1 | AT5G25530 | 26.912 | 353 | 218 | 9 | 89 | 423 | 4 | 334 | 1.07e-23 | 101 |
MS.gene74302.t1 | AT3G08910 | 28.739 | 341 | 202 | 10 | 89 | 419 | 4 | 313 | 3.25e-22 | 97.4 |
MS.gene74302.t1 | AT5G25530 | 26.316 | 361 | 218 | 10 | 89 | 423 | 4 | 342 | 4.21e-21 | 94.4 |
MS.gene74302.t1 | AT3G47940 | 24.302 | 358 | 222 | 9 | 89 | 419 | 4 | 339 | 6.17e-19 | 88.2 |
MS.gene74302.t1 | AT4G39150 | 44.444 | 99 | 49 | 1 | 89 | 187 | 6 | 98 | 4.88e-18 | 85.5 |
MS.gene74302.t1 | AT4G39150 | 44.444 | 99 | 49 | 1 | 89 | 187 | 6 | 98 | 4.88e-18 | 85.5 |
MS.gene74302.t1 | AT4G39150 | 44.444 | 99 | 49 | 1 | 89 | 187 | 6 | 98 | 4.88e-18 | 85.5 |
MS.gene74302.t1 | AT5G06910 | 41.964 | 112 | 52 | 3 | 90 | 201 | 30 | 128 | 1.30e-17 | 83.2 |
MS.gene74302.t1 | AT3G12170 | 42.308 | 104 | 57 | 1 | 64 | 167 | 22 | 122 | 4.18e-17 | 82.0 |
MS.gene74302.t1 | AT2G21510 | 41.414 | 99 | 52 | 1 | 89 | 187 | 6 | 98 | 5.96e-17 | 82.0 |
MS.gene74302.t1 | AT2G21510 | 41.414 | 99 | 52 | 1 | 89 | 187 | 6 | 98 | 8.01e-17 | 82.0 |
MS.gene74302.t1 | AT2G21510 | 41.414 | 99 | 52 | 1 | 89 | 187 | 6 | 98 | 8.01e-17 | 82.0 |
MS.gene74302.t1 | AT2G21510 | 41.414 | 99 | 52 | 1 | 89 | 187 | 6 | 98 | 8.55e-17 | 82.0 |
MS.gene74302.t1 | AT2G21510 | 41.414 | 99 | 52 | 1 | 89 | 187 | 6 | 98 | 8.55e-17 | 82.0 |
MS.gene74302.t1 | AT5G01390 | 44.444 | 108 | 53 | 3 | 89 | 189 | 4 | 111 | 3.17e-16 | 78.2 |
MS.gene74302.t1 | AT1G59980 | 40.625 | 128 | 67 | 5 | 91 | 217 | 25 | 144 | 3.98e-16 | 80.1 |
MS.gene74302.t1 | AT3G12170 | 51.250 | 80 | 36 | 1 | 88 | 167 | 10 | 86 | 4.32e-16 | 78.6 |
MS.gene74302.t1 | AT1G76700 | 42.857 | 98 | 50 | 1 | 89 | 186 | 6 | 97 | 4.43e-16 | 80.1 |
MS.gene74302.t1 | AT1G59980 | 37.956 | 137 | 76 | 5 | 91 | 226 | 25 | 153 | 7.51e-16 | 79.7 |
MS.gene74302.t1 | AT5G01390 | 44.444 | 108 | 53 | 3 | 89 | 189 | 4 | 111 | 8.19e-16 | 77.8 |
MS.gene74302.t1 | AT1G21080 | 52.857 | 70 | 33 | 0 | 89 | 158 | 6 | 75 | 9.55e-16 | 79.3 |
MS.gene74302.t1 | AT1G21080 | 52.857 | 70 | 33 | 0 | 89 | 158 | 6 | 75 | 9.82e-16 | 79.0 |
MS.gene74302.t1 | AT5G01390 | 46.789 | 109 | 49 | 4 | 89 | 189 | 4 | 111 | 1.19e-15 | 76.6 |
MS.gene74302.t1 | AT1G68370 | 26.255 | 259 | 128 | 6 | 76 | 283 | 2 | 248 | 1.68e-15 | 78.6 |
MS.gene74302.t1 | AT4G28480 | 42.593 | 108 | 55 | 3 | 89 | 189 | 4 | 111 | 4.47e-15 | 76.6 |
MS.gene74302.t1 | AT4G28480 | 42.593 | 108 | 55 | 3 | 89 | 189 | 4 | 111 | 4.87e-15 | 75.9 |
MS.gene74302.t1 | AT1G10350 | 49.296 | 71 | 35 | 1 | 89 | 158 | 4 | 74 | 1.87e-14 | 74.7 |
MS.gene74302.t1 | AT1G77020 | 38.776 | 98 | 54 | 1 | 90 | 187 | 7 | 98 | 3.16e-14 | 74.3 |
MS.gene74302.t1 | AT1G24120 | 36.585 | 123 | 70 | 3 | 86 | 208 | 17 | 131 | 4.03e-14 | 74.3 |
MS.gene74302.t1 | AT1G71000 | 42.857 | 70 | 36 | 1 | 86 | 151 | 5 | 74 | 6.23e-14 | 70.1 |
MS.gene74302.t1 | AT3G08970 | 54.412 | 68 | 30 | 1 | 89 | 156 | 27 | 93 | 1.95e-13 | 72.8 |
MS.gene74302.t1 | AT3G08970 | 54.412 | 68 | 30 | 1 | 89 | 156 | 27 | 93 | 1.95e-13 | 72.8 |
MS.gene74302.t1 | AT1G56300 | 43.243 | 74 | 38 | 1 | 82 | 151 | 6 | 79 | 3.31e-13 | 66.6 |
MS.gene74302.t1 | AT5G03160 | 53.030 | 66 | 30 | 1 | 88 | 152 | 369 | 434 | 5.45e-13 | 71.2 |
MS.gene74302.t1 | AT1G71000 | 45.455 | 66 | 32 | 1 | 90 | 151 | 9 | 74 | 5.96e-13 | 67.0 |
MS.gene74302.t1 | AT1G56300 | 43.243 | 74 | 38 | 1 | 82 | 151 | 6 | 79 | 9.28e-13 | 66.2 |
MS.gene74302.t1 | AT2G33735 | 46.154 | 65 | 35 | 0 | 88 | 152 | 21 | 85 | 1.12e-12 | 65.1 |
MS.gene74302.t1 | AT2G33735 | 46.154 | 65 | 35 | 0 | 88 | 152 | 21 | 85 | 1.12e-12 | 65.1 |
MS.gene74302.t1 | AT5G16650 | 47.761 | 67 | 35 | 0 | 88 | 154 | 10 | 76 | 1.70e-12 | 64.7 |
MS.gene74302.t1 | AT2G41000 | 41.304 | 92 | 49 | 1 | 89 | 175 | 3 | 94 | 1.79e-12 | 67.0 |
MS.gene74302.t1 | AT5G05750 | 34.615 | 104 | 64 | 3 | 88 | 189 | 113 | 214 | 6.53e-12 | 66.6 |
MS.gene74302.t1 | AT2G41000 | 41.304 | 92 | 49 | 1 | 89 | 175 | 3 | 94 | 1.31e-11 | 63.5 |
MS.gene74302.t1 | AT5G16650 | 47.761 | 67 | 35 | 0 | 88 | 154 | 10 | 76 | 1.36e-11 | 63.2 |
MS.gene74302.t1 | AT1G61770 | 47.692 | 65 | 33 | 1 | 87 | 151 | 32 | 95 | 1.41e-11 | 65.5 |
MS.gene74302.t1 | AT5G49060 | 48.485 | 66 | 33 | 1 | 89 | 154 | 99 | 163 | 2.55e-11 | 65.5 |
MS.gene74302.t1 | AT5G49060 | 48.485 | 66 | 33 | 1 | 89 | 154 | 99 | 163 | 2.55e-11 | 65.5 |
MS.gene74302.t1 | AT1G79940 | 34.074 | 135 | 81 | 6 | 27 | 155 | 33 | 165 | 5.95e-11 | 65.1 |
MS.gene74302.t1 | AT1G79940 | 34.074 | 135 | 81 | 6 | 27 | 155 | 33 | 165 | 5.95e-11 | 65.1 |
MS.gene74302.t1 | AT1G79940 | 34.074 | 135 | 81 | 6 | 27 | 155 | 33 | 165 | 5.95e-11 | 65.1 |
MS.gene74302.t1 | AT1G79940 | 34.074 | 135 | 81 | 6 | 27 | 155 | 33 | 165 | 6.57e-11 | 64.7 |
Find 121 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGGAGCAGCAAATACTTATT+TGG | 0.161907 | 3.1:+19565161 | MS.gene74302:CDS |
TTACAGCGCTTACAGGTTTC+AGG | 0.172339 | 3.1:-19568609 | None:intergenic |
CCCTTTGGAGGCGGTGGCTT+TGG | 0.221063 | 3.1:+19567729 | MS.gene74302:CDS |
GTCAGTCAAATTGGATATTA+TGG | 0.234343 | 3.1:+19569457 | MS.gene74302:CDS |
GGAAAAGCTGCTTCGGCTTC+TGG | 0.249779 | 3.1:+19574047 | MS.gene74302:CDS |
ATTCAGGTCCCAACTCTTAC+TGG | 0.281089 | 3.1:+19573094 | MS.gene74302:CDS |
GGAGCAGCAAATACTTATTT+GGG | 0.282978 | 3.1:+19565162 | MS.gene74302:CDS |
TTCTGACCGTGTTGTGTTCC+AGG | 0.285979 | 3.1:-19573225 | None:intergenic |
ATTGAAGAACTGGGTGCTAT+TGG | 0.286647 | 3.1:+19565140 | MS.gene74302:CDS |
ATGTACAAGCTGGCGTATTT+AGG | 0.288066 | 3.1:+19568763 | MS.gene74302:CDS |
AATCGTTCTTCTAAAGTTAC+TGG | 0.291081 | 3.1:+19564234 | MS.gene74302:CDS |
GATGGTGGCTTTGGTCCCTT+TGG | 0.298687 | 3.1:+19567714 | MS.gene74302:CDS |
ATTTGTTGCGGAGGAGATTA+GGG | 0.299070 | 3.1:-19564055 | None:intergenic |
GAAATAAAGAAAGCATACTA+TGG | 0.300259 | 3.1:+19565497 | MS.gene74302:CDS |
AGCAACCAAGTCAGTCAAAT+TGG | 0.322413 | 3.1:+19569448 | MS.gene74302:CDS |
TACTGGGGATGTTGTTGTTA+AGG | 0.326185 | 3.1:+19573111 | MS.gene74302:CDS |
CAATATGAATCTTCCGATAA+AGG | 0.341538 | 3.1:+19574026 | MS.gene74302:CDS |
GTAAACCGAGAAAATGGTTC+TGG | 0.348842 | 3.1:+19567690 | MS.gene74302:CDS |
TGACCCTTTACAGCGCTTAC+AGG | 0.351457 | 3.1:-19568616 | None:intergenic |
CTCGGTTTACAAAACCTTCA+TGG | 0.359083 | 3.1:-19567677 | None:intergenic |
GGATATAGGACATTGAATTC+AGG | 0.359170 | 3.1:+19564204 | MS.gene74302:CDS |
GGATCATCTTTGTTTGTGTC+AGG | 0.359672 | 3.1:-19566144 | None:intergenic |
TGTTTGAAATGTAATGGTTT+TGG | 0.360146 | 3.1:-19568410 | None:intergenic |
TATTTGTTGCGGAGGAGATT+AGG | 0.361923 | 3.1:-19564056 | None:intergenic |
CTGAATGGTTCCGCCCAAAA+TGG | 0.371806 | 3.1:-19573077 | None:intergenic |
CATATCTGTTTGAAATGTAA+TGG | 0.373827 | 3.1:-19568416 | None:intergenic |
GGTGGGAGTGGGGTTCCTCC+TGG | 0.384899 | 3.1:+19568579 | MS.gene74302:intron |
ATGGTGTTAAATTGAAGAAC+TGG | 0.387127 | 3.1:+19565130 | MS.gene74302:CDS |
GAGTGTTGCAAAGGGGATAT+AGG | 0.400990 | 3.1:+19564190 | MS.gene74302:CDS |
CTTGTTTCGCAGGTGCGTCC+TGG | 0.401076 | 3.1:+19573207 | MS.gene74302:intron |
TCACCAGGTCGATCTCCTTC+AGG | 0.401187 | 3.1:-19570170 | None:intergenic |
AGAAATTTCAAGAAGTTTCA+AGG | 0.402733 | 3.1:+19566178 | MS.gene74302:CDS |
TTGAAGAACTGGGTGCTATT+GGG | 0.413042 | 3.1:+19565141 | MS.gene74302:CDS |
GGTTCTGGAGATGGTGGCTT+TGG | 0.418459 | 3.1:+19567705 | MS.gene74302:CDS |
TGAACAATTGCAGGTGGGAG+TGG | 0.421996 | 3.1:+19568567 | MS.gene74302:intron |
CCCCAAATGGTTCGCTCCAA+TGG | 0.433535 | 3.1:+19564005 | None:intergenic |
GACTACATGTGGTGCATGTA+AGG | 0.435204 | 3.1:+19568791 | MS.gene74302:CDS |
TCCACGGACAGCTTCCATAA+AGG | 0.438460 | 3.1:-19568383 | None:intergenic |
CGATAAAGGAAAAGCTGCTT+CGG | 0.441523 | 3.1:+19574040 | MS.gene74302:CDS |
GAACAATTGCAGGTGGGAGT+GGG | 0.444602 | 3.1:+19568568 | MS.gene74302:intron |
ACCATAAGGGTTTGCAAAAG+TGG | 0.446405 | 3.1:+19570137 | MS.gene74302:CDS |
CAGGTTTCAGGTCTTGTACC+AGG | 0.447146 | 3.1:-19568597 | None:intergenic |
AGAAGTTTCAAGGGCATATG+AGG | 0.447678 | 3.1:+19566188 | MS.gene74302:CDS |
GGTGGCTTTGGTCCCTTTGG+AGG | 0.453256 | 3.1:+19567717 | MS.gene74302:CDS |
TGATCTTTATGTTACTATCA+AGG | 0.453374 | 3.1:+19570190 | MS.gene74302:CDS |
GGGGCAACTAGATCCATTCA+TGG | 0.455696 | 3.1:+19565183 | MS.gene74302:CDS |
ATTTATACCTGATCCATGAA+TGG | 0.455766 | 3.1:-19565196 | None:intergenic |
TTGACAACAATGAAACCATA+AGG | 0.461602 | 3.1:+19570123 | MS.gene74302:CDS |
ACTAGATCCATTCATGGATC+AGG | 0.467009 | 3.1:+19565189 | MS.gene74302:CDS |
AAGAAGAAGCTTGACGCCAT+TGG | 0.469160 | 3.1:-19564021 | None:intergenic |
TAATCGGAACATTGGCGGAC+AGG | 0.471543 | 3.1:+19568251 | MS.gene74302:CDS |
ATTCCCGCTGTCTATCTGTC+AGG | 0.476235 | 3.1:-19573977 | None:intergenic |
GGTGAATTTCAGGTATATGA+AGG | 0.477900 | 3.1:+19564168 | MS.gene74302:intron |
CTCTTTAATCGGAACATTGG+CGG | 0.480670 | 3.1:+19568246 | MS.gene74302:CDS |
TTCAGGTCCCAACTCTTACT+GGG | 0.483137 | 3.1:+19573095 | MS.gene74302:CDS |
GAAACCTGTAAGCGCTGTAA+AGG | 0.483461 | 3.1:+19568612 | MS.gene74302:CDS |
GGCTTTGGTCCCTTTGGAGG+CGG | 0.484799 | 3.1:+19567720 | MS.gene74302:CDS |
TTTGGTCCCTTTGGAGGCGG+TGG | 0.485763 | 3.1:+19567723 | MS.gene74302:CDS |
AAATAAAGAAAGCATACTAT+GGG | 0.491279 | 3.1:+19565498 | MS.gene74302:CDS |
GTCAAATTGGATATTATGGC+TGG | 0.491860 | 3.1:+19569461 | MS.gene74302:CDS |
AAACCTGTAAGCGCTGTAAA+GGG | 0.493634 | 3.1:+19568613 | MS.gene74302:CDS |
CGAGAAAATGGTTCTGGAGA+TGG | 0.499609 | 3.1:+19567696 | MS.gene74302:CDS |
TGTAAGCGCTGTAAAGGGTC+AGG | 0.500700 | 3.1:+19568618 | MS.gene74302:CDS |
TGACAACAATGAAACCATAA+GGG | 0.501820 | 3.1:+19570124 | MS.gene74302:CDS |
AATATCCAATTTGACTGACT+TGG | 0.512605 | 3.1:-19569453 | None:intergenic |
GATCCTTCTCTACGGAAGAC+AGG | 0.514946 | 3.1:-19570322 | None:intergenic |
GAAATTTCAAGAAGTTTCAA+GGG | 0.515825 | 3.1:+19566179 | MS.gene74302:CDS |
TCCAAAGCCACCGCCTCCAA+AGG | 0.520033 | 3.1:-19567730 | None:intergenic |
CAACATCCCCAGTAAGAGTT+GGG | 0.525837 | 3.1:-19573102 | None:intergenic |
ATATGAAGGAGTGTTGCAAA+GGG | 0.531685 | 3.1:+19564182 | MS.gene74302:CDS |
TCCTTTATGGAAGCTGTCCG+TGG | 0.536632 | 3.1:+19568382 | MS.gene74302:CDS |
AGAGTACGTATTTGTTGCGG+AGG | 0.538860 | 3.1:-19564064 | None:intergenic |
TGTGGTGCATGTAAGGGATC+TGG | 0.541793 | 3.1:+19568798 | MS.gene74302:CDS |
GTATGCTTTCTTTATTTCAG+AGG | 0.543899 | 3.1:-19565492 | None:intergenic |
CCAAAGCCACCGCCTCCAAA+GGG | 0.546016 | 3.1:-19567729 | None:intergenic |
GACCTCTTTAATCGGAACAT+TGG | 0.548612 | 3.1:+19568243 | MS.gene74302:CDS |
AAAACGTCAAGAGTATGATC+AGG | 0.549248 | 3.1:+19566352 | MS.gene74302:CDS |
GATATGTAGGTTGGCCATGA+AGG | 0.551132 | 3.1:+19567663 | MS.gene74302:intron |
TCATAAAAGTCCTTTGCCAA+TGG | 0.553690 | 3.1:-19565440 | None:intergenic |
TGTTCCGATTAAAGAGGTCA+TGG | 0.554621 | 3.1:-19568239 | None:intergenic |
TATATGAAGGAGTGTTGCAA+AGG | 0.560224 | 3.1:+19564181 | MS.gene74302:CDS |
ACAACATCCCCAGTAAGAGT+TGG | 0.560824 | 3.1:-19573103 | None:intergenic |
GAGTTTCTGCAAGTCATGCA+AGG | 0.561847 | 3.1:+19569409 | MS.gene74302:intron |
CGCCAATGTTCCGATTAAAG+AGG | 0.565093 | 3.1:-19568245 | None:intergenic |
GATCCTGTCTTCCGTAGAGA+AGG | 0.566629 | 3.1:+19570319 | MS.gene74302:CDS |
AACAATTGCAGGTGGGAGTG+GGG | 0.568110 | 3.1:+19568569 | MS.gene74302:intron |
ATACTGATTGCAGTTGGAGA+TGG | 0.568551 | 3.1:+19565111 | MS.gene74302:intron |
CAAGTCATGCAAGGGTGCAA+AGG | 0.577318 | 3.1:+19569418 | MS.gene74302:CDS |
CGGCAGACATATGTACAAGC+TGG | 0.581015 | 3.1:+19568753 | MS.gene74302:intron |
AGTAAGAGTTGGGACCTGAA+TGG | 0.587664 | 3.1:-19573092 | None:intergenic |
TGTCTTCCGTAGAGAAGGAT+CGG | 0.591949 | 3.1:+19570324 | MS.gene74302:CDS |
ACAAGCTGGCGTATTTAGGA+TGG | 0.599072 | 3.1:+19568767 | MS.gene74302:CDS |
GAATATCCGATCCTTCTCTA+CGG | 0.600340 | 3.1:-19570330 | None:intergenic |
ACTACATGTGGTGCATGTAA+GGG | 0.605467 | 3.1:+19568792 | MS.gene74302:CDS |
GAGCAGCAAATACTTATTTG+GGG | 0.607798 | 3.1:+19565163 | MS.gene74302:CDS |
GATATGATTTGTAACACTTG+TGG | 0.611871 | 3.1:+19568433 | MS.gene74302:CDS |
AAACAAAGATGATCCTGAAG+CGG | 0.617397 | 3.1:+19566152 | MS.gene74302:CDS |
AAGGTGGTTCTGAAACAGAA+AGG | 0.617446 | 3.1:+19573246 | MS.gene74302:CDS |
CATTGGCGGACAGGATGTCA+AGG | 0.620017 | 3.1:+19568260 | MS.gene74302:CDS |
GGGATCTGGCAAAATTGTCA+AGG | 0.620983 | 3.1:+19568812 | MS.gene74302:CDS |
TGGAACACAACACGGTCAGA+AGG | 0.622014 | 3.1:+19573227 | MS.gene74302:CDS |
GAAAATGGTTCTGGAGATGG+TGG | 0.624903 | 3.1:+19567699 | MS.gene74302:CDS |
GAGAGAGTACGTATTTGTTG+CGG | 0.627054 | 3.1:-19564067 | None:intergenic |
AAACCTGACAGATAGACAGC+GGG | 0.627667 | 3.1:+19573974 | MS.gene74302:CDS |
TTTGTTGCGGAGGAGATTAG+GGG | 0.633616 | 3.1:-19564054 | None:intergenic |
AGTTTCTGCAAGTCATGCAA+GGG | 0.642039 | 3.1:+19569410 | MS.gene74302:CDS |
TCAGGTCCCAACTCTTACTG+GGG | 0.642067 | 3.1:+19573096 | MS.gene74302:CDS |
GTGCGTCCTGGAACACAACA+CGG | 0.643446 | 3.1:+19573219 | MS.gene74302:CDS |
AGTGGTGGTGCAGATCCTGA+AGG | 0.645126 | 3.1:+19570155 | MS.gene74302:CDS |
TATGAAGGAGTGTTGCAAAG+GGG | 0.654259 | 3.1:+19564183 | MS.gene74302:CDS |
AGCAGCAAATACTTATTTGG+GGG | 0.661568 | 3.1:+19565164 | MS.gene74302:CDS |
ATAAGGGTTTGCAAAAGTGG+TGG | 0.662851 | 3.1:+19570140 | MS.gene74302:CDS |
ATAGTAACATAAAGATCACC+AGG | 0.666019 | 3.1:-19570185 | None:intergenic |
GCGCTGTAAAGGGTCAGGAG+TGG | 0.670919 | 3.1:+19568623 | MS.gene74302:CDS |
GATCCTGAAGGAGATCGACC+TGG | 0.675452 | 3.1:+19570167 | MS.gene74302:CDS |
TGGTGTTAAATTGAAGAACT+GGG | 0.678693 | 3.1:+19565131 | MS.gene74302:CDS |
AACACAACACGGTCAGAAGG+TGG | 0.683119 | 3.1:+19573230 | MS.gene74302:CDS |
TTTAGGATGGAGACTACATG+TGG | 0.696317 | 3.1:+19568780 | MS.gene74302:CDS |
AATAAAGAAAGCATACTATG+GGG | 0.714970 | 3.1:+19565499 | MS.gene74302:CDS |
GAAACCTGACAGATAGACAG+CGG | 0.716980 | 3.1:+19573973 | MS.gene74302:intron |
GTTTCAGGTCTTGTACCAGG+AGG | 0.745812 | 3.1:-19568594 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 19564011 | 19574073 | 19564011 | ID=MS.gene74302 |
chr3.1 | mRNA | 19564011 | 19574073 | 19564011 | ID=MS.gene74302.t1;Parent=MS.gene74302 |
chr3.1 | exon | 19564011 | 19564079 | 19564011 | ID=MS.gene74302.t1.exon1;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19564011 | 19564079 | 19564011 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
chr3.1 | exon | 19564180 | 19564273 | 19564180 | ID=MS.gene74302.t1.exon2;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19564180 | 19564273 | 19564180 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
chr3.1 | exon | 19565124 | 19565210 | 19565124 | ID=MS.gene74302.t1.exon3;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19565124 | 19565210 | 19565124 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
chr3.1 | exon | 19565438 | 19565520 | 19565438 | ID=MS.gene74302.t1.exon4;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19565438 | 19565520 | 19565438 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
chr3.1 | exon | 19566126 | 19566209 | 19566126 | ID=MS.gene74302.t1.exon5;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19566126 | 19566209 | 19566126 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
chr3.1 | exon | 19566335 | 19566373 | 19566335 | ID=MS.gene74302.t1.exon6;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19566335 | 19566373 | 19566335 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
chr3.1 | exon | 19567672 | 19567761 | 19567672 | ID=MS.gene74302.t1.exon7;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19567672 | 19567761 | 19567672 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
chr3.1 | exon | 19568231 | 19568281 | 19568231 | ID=MS.gene74302.t1.exon8;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19568231 | 19568281 | 19568231 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
chr3.1 | exon | 19568367 | 19568454 | 19568367 | ID=MS.gene74302.t1.exon9;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19568367 | 19568454 | 19568367 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
chr3.1 | exon | 19568580 | 19568644 | 19568580 | ID=MS.gene74302.t1.exon10;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19568580 | 19568644 | 19568580 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
chr3.1 | exon | 19568759 | 19568833 | 19568759 | ID=MS.gene74302.t1.exon11;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19568759 | 19568833 | 19568759 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
chr3.1 | exon | 19569410 | 19569482 | 19569410 | ID=MS.gene74302.t1.exon12;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19569410 | 19569482 | 19569410 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
chr3.1 | exon | 19570120 | 19570211 | 19570120 | ID=MS.gene74302.t1.exon13;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19570120 | 19570211 | 19570120 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
chr3.1 | exon | 19570310 | 19570381 | 19570310 | ID=MS.gene74302.t1.exon14;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19570310 | 19570381 | 19570310 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
chr3.1 | exon | 19573076 | 19573132 | 19573076 | ID=MS.gene74302.t1.exon15;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19573076 | 19573132 | 19573076 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
chr3.1 | exon | 19573219 | 19573267 | 19573219 | ID=MS.gene74302.t1.exon16;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19573219 | 19573267 | 19573219 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
chr3.1 | exon | 19573378 | 19573444 | 19573378 | ID=MS.gene74302.t1.exon17;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19573378 | 19573444 | 19573378 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
chr3.1 | exon | 19573974 | 19574073 | 19573974 | ID=MS.gene74302.t1.exon18;Parent=MS.gene74302.t1 |
chr3.1 | CDS | 19573974 | 19574073 | 19573974 | ID=cds.MS.gene74302.t1;Parent=MS.gene74302.t1 |
Gene Sequence |
Protein sequence |