Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99077.t1 | XP_003605063.1 | 96.2 | 442 | 17 | 0 | 1 | 442 | 1 | 442 | 9.80E-238 | 832.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99077.t1 | Q8GWW8 | 56.9 | 422 | 163 | 6 | 34 | 441 | 39 | 455 | 1.7e-126 | 454.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99077.t1 | G7JDD2 | 96.2 | 442 | 17 | 0 | 1 | 442 | 1 | 442 | 7.0e-238 | 832.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049159 | MS.gene99077 | 0.812715 | 3.69E-51 | -1.69E-46 |
MS.gene049254 | MS.gene99077 | 0.851255 | 9.99E-61 | -1.69E-46 |
MS.gene049404 | MS.gene99077 | 0.844006 | 9.87E-59 | -1.69E-46 |
MS.gene049435 | MS.gene99077 | 0.803455 | 3.46E-49 | -1.69E-46 |
MS.gene049501 | MS.gene99077 | 0.810967 | 8.86E-51 | -1.69E-46 |
MS.gene049850 | MS.gene99077 | 0.814564 | 1.45E-51 | -1.69E-46 |
MS.gene049873 | MS.gene99077 | 0.810189 | 1.30E-50 | -1.69E-46 |
MS.gene050026 | MS.gene99077 | 0.814058 | 1.87E-51 | -1.69E-46 |
MS.gene050355 | MS.gene99077 | 0.800081 | 1.70E-48 | -1.69E-46 |
MS.gene050442 | MS.gene99077 | 0.818795 | 1.63E-52 | -1.69E-46 |
MS.gene050559 | MS.gene99077 | 0.804839 | 1.78E-49 | -1.69E-46 |
MS.gene050561 | MS.gene99077 | 0.802132 | 6.49E-49 | -1.69E-46 |
MS.gene050759 | MS.gene99077 | 0.816181 | 6.31E-52 | -1.69E-46 |
MS.gene050962 | MS.gene99077 | 0.808672 | 2.76E-50 | -1.69E-46 |
MS.gene051198 | MS.gene99077 | 0.815741 | 7.91E-52 | -1.69E-46 |
MS.gene051247 | MS.gene99077 | 0.82703 | 1.96E-54 | -1.69E-46 |
MS.gene051279 | MS.gene99077 | 0.802754 | 4.83E-49 | -1.69E-46 |
MS.gene051744 | MS.gene99077 | 0.842241 | 2.92E-58 | -1.69E-46 |
MS.gene051957 | MS.gene99077 | 0.809748 | 1.62E-50 | -1.69E-46 |
MS.gene052208 | MS.gene99077 | 0.80773 | 4.38E-50 | -1.69E-46 |
MS.gene052516 | MS.gene99077 | 0.822473 | 2.32E-53 | -1.69E-46 |
MS.gene052519 | MS.gene99077 | 0.811186 | 7.94E-51 | -1.69E-46 |
MS.gene052582 | MS.gene99077 | 0.867512 | 1.30E-65 | -1.69E-46 |
MS.gene052584 | MS.gene99077 | 0.870242 | 1.69E-66 | -1.69E-46 |
MS.gene052611 | MS.gene99077 | 0.803061 | 4.17E-49 | -1.69E-46 |
MS.gene052867 | MS.gene99077 | 0.81706 | 4.01E-52 | -1.69E-46 |
MS.gene053006 | MS.gene99077 | 0.824684 | 7.07E-54 | -1.69E-46 |
MS.gene053008 | MS.gene99077 | 0.819706 | 1.01E-52 | -1.69E-46 |
MS.gene053166 | MS.gene99077 | 0.825519 | 4.49E-54 | -1.69E-46 |
MS.gene053226 | MS.gene99077 | 0.858365 | 8.66E-63 | -1.69E-46 |
MS.gene05414 | MS.gene99077 | 0.804571 | 2.03E-49 | -1.69E-46 |
MS.gene05415 | MS.gene99077 | 0.831808 | 1.35E-55 | -1.69E-46 |
MS.gene05423 | MS.gene99077 | 0.809307 | 2.02E-50 | -1.69E-46 |
MS.gene054291 | MS.gene99077 | -0.806594 | 7.63E-50 | -1.69E-46 |
MS.gene054651 | MS.gene99077 | 0.858379 | 8.58E-63 | -1.69E-46 |
MS.gene054775 | MS.gene99077 | 0.826863 | 2.15E-54 | -1.69E-46 |
MS.gene055166 | MS.gene99077 | 0.828949 | 6.77E-55 | -1.69E-46 |
MS.gene055586 | MS.gene99077 | 0.847391 | 1.19E-59 | -1.69E-46 |
MS.gene055589 | MS.gene99077 | 0.820326 | 7.28E-53 | -1.69E-46 |
MS.gene055778 | MS.gene99077 | 0.806417 | 8.31E-50 | -1.69E-46 |
MS.gene055818 | MS.gene99077 | 0.811518 | 6.73E-51 | -1.69E-46 |
MS.gene055841 | MS.gene99077 | 0.805189 | 1.51E-49 | -1.69E-46 |
MS.gene05604 | MS.gene99077 | 0.813579 | 2.38E-51 | -1.69E-46 |
MS.gene056050 | MS.gene99077 | 0.818044 | 2.41E-52 | -1.69E-46 |
MS.gene056162 | MS.gene99077 | 0.821843 | 3.25E-53 | -1.69E-46 |
MS.gene056366 | MS.gene99077 | 0.839303 | 1.72E-57 | -1.69E-46 |
MS.gene056506 | MS.gene99077 | 0.813251 | 2.81E-51 | -1.69E-46 |
MS.gene056776 | MS.gene99077 | 0.803065 | 4.16E-49 | -1.69E-46 |
MS.gene05686 | MS.gene99077 | 0.81041 | 1.17E-50 | -1.69E-46 |
MS.gene05690 | MS.gene99077 | 0.807376 | 5.21E-50 | -1.69E-46 |
MS.gene057026 | MS.gene99077 | 0.818032 | 2.42E-52 | -1.69E-46 |
MS.gene057060 | MS.gene99077 | 0.823216 | 1.56E-53 | -1.69E-46 |
MS.gene057208 | MS.gene99077 | 0.803748 | 3.01E-49 | -1.69E-46 |
MS.gene057414 | MS.gene99077 | 0.82838 | 9.29E-55 | -1.69E-46 |
MS.gene057444 | MS.gene99077 | 0.845002 | 5.33E-59 | -1.69E-46 |
MS.gene057693 | MS.gene99077 | 0.810704 | 1.01E-50 | -1.69E-46 |
MS.gene057915 | MS.gene99077 | 0.801907 | 7.21E-49 | -1.69E-46 |
MS.gene058010 | MS.gene99077 | 0.800376 | 1.48E-48 | -1.69E-46 |
MS.gene058625 | MS.gene99077 | 0.832232 | 1.06E-55 | -1.69E-46 |
MS.gene058979 | MS.gene99077 | 0.826474 | 2.66E-54 | -1.69E-46 |
MS.gene05954 | MS.gene99077 | 0.816215 | 6.20E-52 | -1.69E-46 |
MS.gene059625 | MS.gene99077 | 0.807498 | 4.91E-50 | -1.69E-46 |
MS.gene060011 | MS.gene99077 | 0.806375 | 8.48E-50 | -1.69E-46 |
MS.gene060137 | MS.gene99077 | -0.810745 | 9.89E-51 | -1.69E-46 |
MS.gene060322 | MS.gene99077 | 0.824982 | 6.01E-54 | -1.69E-46 |
MS.gene060373 | MS.gene99077 | 0.802663 | 5.04E-49 | -1.69E-46 |
MS.gene060521 | MS.gene99077 | 0.835808 | 1.35E-56 | -1.69E-46 |
MS.gene060572 | MS.gene99077 | 0.800009 | 1.76E-48 | -1.69E-46 |
MS.gene060840 | MS.gene99077 | 0.803566 | 3.28E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene99077 | MS.gene043886 | PPI |
MS.gene99077 | MS.gene052122 | PPI |
MS.gene050058 | MS.gene99077 | PPI |
MS.gene010151 | MS.gene99077 | PPI |
MS.gene99077 | MS.gene071169 | PPI |
MS.gene99077 | MS.gene045133 | PPI |
MS.gene30955 | MS.gene99077 | PPI |
MS.gene021114 | MS.gene99077 | PPI |
MS.gene99077 | MS.gene75493 | PPI |
MS.gene004045 | MS.gene99077 | PPI |
MS.gene99077 | MS.gene64132 | PPI |
MS.gene45489 | MS.gene99077 | PPI |
MS.gene31156 | MS.gene99077 | PPI |
MS.gene052188 | MS.gene99077 | PPI |
MS.gene99077 | MS.gene41176 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99077.t1 | MTR_4g023470 | 96.380 | 442 | 16 | 0 | 1 | 442 | 1 | 442 | 0.0 | 884 |
MS.gene99077.t1 | MTR_3g027580 | 67.111 | 450 | 131 | 7 | 1 | 441 | 1 | 442 | 0.0 | 586 |
MS.gene99077.t1 | MTR_4g023490 | 67.196 | 378 | 98 | 6 | 81 | 442 | 11 | 378 | 1.14e-167 | 476 |
MS.gene99077.t1 | MTR_5g065160 | 40.247 | 405 | 217 | 5 | 34 | 428 | 37 | 426 | 2.09e-97 | 300 |
MS.gene99077.t1 | MTR_5g065160 | 40.247 | 405 | 217 | 5 | 34 | 428 | 37 | 426 | 2.10e-97 | 299 |
MS.gene99077.t1 | MTR_5g065160 | 40.247 | 405 | 217 | 5 | 34 | 428 | 30 | 419 | 2.40e-97 | 300 |
MS.gene99077.t1 | MTR_5g065160 | 40.196 | 408 | 212 | 7 | 34 | 428 | 37 | 425 | 1.01e-96 | 298 |
MS.gene99077.t1 | MTR_3g087030 | 37.913 | 393 | 219 | 6 | 63 | 432 | 43 | 433 | 1.27e-72 | 235 |
MS.gene99077.t1 | MTR_2g104030 | 34.133 | 375 | 213 | 6 | 75 | 425 | 59 | 423 | 2.58e-62 | 210 |
MS.gene99077.t1 | MTR_8g006430 | 36.127 | 346 | 184 | 12 | 87 | 410 | 15 | 345 | 1.01e-50 | 177 |
MS.gene99077.t1 | MTR_6g471050 | 30.357 | 336 | 202 | 5 | 112 | 425 | 7 | 332 | 9.45e-45 | 162 |
MS.gene99077.t1 | MTR_2g087660 | 34.770 | 348 | 209 | 9 | 87 | 422 | 14 | 355 | 3.11e-40 | 149 |
MS.gene99077.t1 | MTR_4g050420 | 34.694 | 343 | 204 | 10 | 87 | 417 | 14 | 348 | 1.31e-36 | 139 |
MS.gene99077.t1 | MTR_2g087660 | 35.599 | 309 | 181 | 9 | 87 | 383 | 14 | 316 | 1.09e-35 | 134 |
MS.gene99077.t1 | MTR_7g109340 | 30.056 | 356 | 201 | 10 | 80 | 422 | 20 | 340 | 1.73e-29 | 118 |
MS.gene99077.t1 | MTR_3g108020 | 24.926 | 337 | 225 | 7 | 87 | 418 | 5 | 318 | 2.51e-21 | 94.7 |
MS.gene99077.t1 | MTR_4g078850 | 27.095 | 358 | 209 | 10 | 87 | 418 | 5 | 336 | 5.90e-21 | 94.0 |
MS.gene99077.t1 | MTR_2g090705 | 25.356 | 351 | 217 | 9 | 86 | 418 | 4 | 327 | 5.25e-20 | 90.9 |
MS.gene99077.t1 | MTR_4g015840 | 26.316 | 361 | 203 | 11 | 87 | 418 | 5 | 331 | 1.93e-18 | 86.7 |
MS.gene99077.t1 | MTR_1g110310 | 27.686 | 242 | 131 | 4 | 80 | 281 | 10 | 247 | 7.20e-18 | 85.5 |
MS.gene99077.t1 | MTR_5g035770 | 46.914 | 81 | 43 | 0 | 74 | 154 | 13 | 93 | 1.05e-15 | 79.0 |
MS.gene99077.t1 | MTR_5g004570 | 41.509 | 106 | 49 | 3 | 87 | 189 | 7 | 102 | 2.80e-15 | 75.9 |
MS.gene99077.t1 | MTR_8g037810 | 50.649 | 77 | 33 | 1 | 86 | 157 | 6 | 82 | 3.41e-15 | 77.0 |
MS.gene99077.t1 | MTR_2g014470 | 41.071 | 112 | 50 | 3 | 87 | 187 | 5 | 111 | 5.76e-15 | 76.3 |
MS.gene99077.t1 | MTR_1g029470 | 55.385 | 65 | 29 | 0 | 87 | 151 | 7 | 71 | 3.18e-14 | 74.3 |
MS.gene99077.t1 | MTR_7g092380 | 55.224 | 67 | 30 | 0 | 85 | 151 | 21 | 87 | 4.21e-14 | 72.8 |
MS.gene99077.t1 | MTR_1g029460 | 53.846 | 65 | 30 | 0 | 87 | 151 | 7 | 71 | 5.80e-14 | 73.6 |
MS.gene99077.t1 | MTR_2g014480 | 24.658 | 365 | 205 | 11 | 83 | 411 | 1 | 331 | 1.05e-13 | 72.4 |
MS.gene99077.t1 | MTR_7g101070 | 54.545 | 66 | 29 | 1 | 85 | 149 | 357 | 422 | 1.69e-13 | 72.8 |
MS.gene99077.t1 | MTR_1g105540 | 57.377 | 61 | 25 | 1 | 88 | 148 | 37 | 96 | 2.04e-13 | 71.2 |
MS.gene99077.t1 | MTR_7g112360 | 48.485 | 66 | 30 | 1 | 87 | 148 | 17 | 82 | 9.42e-13 | 65.1 |
MS.gene99077.t1 | MTR_2g436560 | 35.542 | 166 | 89 | 6 | 40 | 196 | 60 | 216 | 1.95e-12 | 68.6 |
MS.gene99077.t1 | MTR_1g052110 | 53.030 | 66 | 31 | 0 | 86 | 151 | 38 | 103 | 2.30e-12 | 67.8 |
MS.gene99077.t1 | MTR_7g112360 | 48.485 | 66 | 30 | 1 | 87 | 148 | 17 | 82 | 3.28e-12 | 65.1 |
MS.gene99077.t1 | MTR_5g065860 | 43.284 | 67 | 38 | 0 | 82 | 148 | 44 | 110 | 4.60e-12 | 63.9 |
MS.gene99077.t1 | MTR_2g097690 | 50.820 | 61 | 29 | 1 | 88 | 148 | 77 | 136 | 3.30e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99077.t1 | AT5G48030 | 54.545 | 462 | 182 | 9 | 1 | 441 | 1 | 455 | 3.42e-167 | 478 |
MS.gene99077.t1 | AT1G28210 | 42.077 | 366 | 188 | 6 | 75 | 428 | 34 | 387 | 3.82e-95 | 292 |
MS.gene99077.t1 | AT1G28210 | 42.077 | 366 | 188 | 6 | 75 | 428 | 34 | 387 | 4.19e-95 | 292 |
MS.gene99077.t1 | AT1G28210 | 42.077 | 366 | 188 | 6 | 75 | 428 | 34 | 387 | 8.06e-95 | 292 |
MS.gene99077.t1 | AT2G22360 | 36.930 | 417 | 230 | 10 | 35 | 432 | 34 | 436 | 1.53e-73 | 238 |
MS.gene99077.t1 | AT4G39960 | 37.838 | 370 | 193 | 7 | 87 | 432 | 86 | 442 | 1.54e-69 | 227 |
MS.gene99077.t1 | AT4G39960 | 37.838 | 370 | 193 | 7 | 87 | 432 | 86 | 442 | 1.54e-69 | 227 |
MS.gene99077.t1 | AT1G80030 | 35.027 | 374 | 209 | 6 | 87 | 436 | 76 | 439 | 1.10e-64 | 216 |
MS.gene99077.t1 | AT1G80030 | 35.027 | 374 | 209 | 6 | 87 | 436 | 76 | 439 | 1.10e-64 | 216 |
MS.gene99077.t1 | AT1G80030 | 35.027 | 374 | 209 | 6 | 87 | 436 | 76 | 439 | 1.10e-64 | 216 |
MS.gene99077.t1 | AT1G80030 | 35.027 | 374 | 209 | 6 | 87 | 436 | 76 | 439 | 1.18e-64 | 216 |
MS.gene99077.t1 | AT3G17830 | 34.160 | 363 | 205 | 5 | 87 | 424 | 64 | 417 | 7.72e-64 | 214 |
MS.gene99077.t1 | AT5G22060 | 33.908 | 348 | 212 | 10 | 87 | 422 | 15 | 356 | 1.26e-39 | 147 |
MS.gene99077.t1 | AT3G44110 | 33.429 | 347 | 214 | 10 | 87 | 422 | 15 | 355 | 6.34e-38 | 143 |
MS.gene99077.t1 | AT3G44110 | 34.899 | 298 | 179 | 9 | 87 | 375 | 15 | 306 | 1.00e-32 | 127 |
MS.gene99077.t1 | AT3G62600 | 28.895 | 353 | 203 | 10 | 85 | 423 | 25 | 343 | 2.01e-26 | 109 |
MS.gene99077.t1 | AT5G25530 | 27.198 | 364 | 211 | 12 | 83 | 422 | 1 | 334 | 7.34e-24 | 102 |
MS.gene99077.t1 | AT1G59725 | 26.513 | 347 | 210 | 9 | 87 | 418 | 5 | 321 | 6.77e-22 | 96.7 |
MS.gene99077.t1 | AT1G10350 | 26.361 | 349 | 226 | 11 | 87 | 418 | 5 | 339 | 2.84e-21 | 95.1 |
MS.gene99077.t1 | AT5G25530 | 26.613 | 372 | 211 | 13 | 83 | 422 | 1 | 342 | 3.00e-21 | 94.7 |
MS.gene99077.t1 | AT2G20560 | 27.405 | 343 | 220 | 9 | 87 | 418 | 5 | 329 | 5.68e-20 | 90.9 |
MS.gene99077.t1 | AT3G08910 | 27.246 | 345 | 210 | 12 | 87 | 422 | 5 | 317 | 3.09e-18 | 85.9 |
MS.gene99077.t1 | AT1G68370 | 27.092 | 251 | 137 | 5 | 73 | 281 | 2 | 248 | 3.70e-17 | 83.6 |
MS.gene99077.t1 | AT4G39150 | 50.000 | 92 | 40 | 2 | 87 | 173 | 7 | 97 | 5.98e-16 | 79.3 |
MS.gene99077.t1 | AT4G39150 | 50.000 | 92 | 40 | 2 | 87 | 173 | 7 | 97 | 5.98e-16 | 79.3 |
MS.gene99077.t1 | AT4G39150 | 50.000 | 92 | 40 | 2 | 87 | 173 | 7 | 97 | 5.98e-16 | 79.3 |
MS.gene99077.t1 | AT3G12170 | 43.956 | 91 | 51 | 0 | 61 | 151 | 22 | 112 | 6.70e-16 | 78.6 |
MS.gene99077.t1 | AT2G21510 | 46.809 | 94 | 44 | 2 | 86 | 174 | 6 | 98 | 1.51e-15 | 77.8 |
MS.gene99077.t1 | AT2G21510 | 47.312 | 93 | 43 | 2 | 87 | 174 | 7 | 98 | 1.80e-15 | 77.8 |
MS.gene99077.t1 | AT2G21510 | 47.312 | 93 | 43 | 2 | 87 | 174 | 7 | 98 | 1.80e-15 | 77.8 |
MS.gene99077.t1 | AT2G21510 | 47.312 | 93 | 43 | 2 | 87 | 174 | 7 | 98 | 1.94e-15 | 77.8 |
MS.gene99077.t1 | AT2G21510 | 47.312 | 93 | 43 | 2 | 87 | 174 | 7 | 98 | 1.94e-15 | 77.8 |
MS.gene99077.t1 | AT5G06910 | 56.061 | 66 | 29 | 0 | 86 | 151 | 29 | 94 | 3.51e-15 | 76.3 |
MS.gene99077.t1 | AT1G59980 | 50.000 | 70 | 35 | 0 | 85 | 154 | 22 | 91 | 6.67e-15 | 76.3 |
MS.gene99077.t1 | AT1G76700 | 41.509 | 106 | 49 | 3 | 87 | 189 | 7 | 102 | 7.56e-15 | 76.3 |
MS.gene99077.t1 | AT1G59980 | 50.000 | 70 | 35 | 0 | 85 | 154 | 22 | 91 | 1.12e-14 | 75.9 |
MS.gene99077.t1 | AT1G56300 | 45.946 | 74 | 36 | 1 | 79 | 148 | 6 | 79 | 2.22e-14 | 69.7 |
MS.gene99077.t1 | AT3G12170 | 52.239 | 67 | 32 | 0 | 85 | 151 | 10 | 76 | 5.03e-14 | 72.4 |
MS.gene99077.t1 | AT1G24120 | 48.611 | 72 | 37 | 0 | 83 | 154 | 17 | 88 | 5.21e-14 | 73.9 |
MS.gene99077.t1 | AT1G77020 | 53.846 | 65 | 30 | 0 | 87 | 151 | 7 | 71 | 6.17e-14 | 73.6 |
MS.gene99077.t1 | AT1G71000 | 44.286 | 70 | 35 | 1 | 83 | 148 | 5 | 74 | 6.88e-14 | 69.7 |
MS.gene99077.t1 | AT5G01390 | 39.474 | 114 | 49 | 4 | 87 | 187 | 5 | 111 | 7.03e-14 | 71.6 |
MS.gene99077.t1 | AT1G21080 | 53.846 | 65 | 30 | 0 | 87 | 151 | 7 | 71 | 8.19e-14 | 73.2 |
MS.gene99077.t1 | AT1G21080 | 53.846 | 65 | 30 | 0 | 87 | 151 | 7 | 71 | 8.42e-14 | 73.2 |
MS.gene99077.t1 | AT5G01390 | 39.474 | 114 | 49 | 4 | 87 | 187 | 5 | 111 | 1.28e-13 | 71.2 |
MS.gene99077.t1 | AT1G56300 | 45.946 | 74 | 36 | 1 | 79 | 148 | 6 | 79 | 1.44e-13 | 68.6 |
MS.gene99077.t1 | AT5G01390 | 39.474 | 114 | 49 | 4 | 87 | 187 | 5 | 111 | 2.31e-13 | 71.2 |
MS.gene99077.t1 | AT5G01390 | 38.393 | 112 | 53 | 3 | 87 | 187 | 5 | 111 | 2.38e-13 | 69.7 |
MS.gene99077.t1 | AT1G71000 | 44.286 | 70 | 35 | 1 | 83 | 148 | 5 | 74 | 4.31e-13 | 67.4 |
MS.gene99077.t1 | AT3G08970 | 47.561 | 82 | 36 | 2 | 88 | 169 | 29 | 103 | 2.55e-12 | 69.3 |
MS.gene99077.t1 | AT3G08970 | 47.561 | 82 | 36 | 2 | 88 | 169 | 29 | 103 | 2.55e-12 | 69.3 |
MS.gene99077.t1 | AT5G03160 | 48.315 | 89 | 40 | 3 | 85 | 172 | 369 | 452 | 6.61e-12 | 67.8 |
MS.gene99077.t1 | AT4G28480 | 38.532 | 109 | 57 | 3 | 86 | 184 | 4 | 112 | 7.83e-12 | 67.0 |
MS.gene99077.t1 | AT4G28480 | 38.532 | 109 | 57 | 3 | 86 | 184 | 4 | 112 | 8.23e-12 | 66.2 |
MS.gene99077.t1 | AT1G61770 | 50.820 | 61 | 29 | 1 | 88 | 148 | 36 | 95 | 8.45e-12 | 66.2 |
MS.gene99077.t1 | AT5G49060 | 49.231 | 65 | 32 | 1 | 87 | 151 | 100 | 163 | 1.43e-11 | 66.2 |
MS.gene99077.t1 | AT5G49060 | 49.231 | 65 | 32 | 1 | 87 | 151 | 100 | 163 | 1.43e-11 | 66.2 |
MS.gene99077.t1 | AT2G33735 | 43.077 | 65 | 37 | 0 | 85 | 149 | 21 | 85 | 1.99e-11 | 61.6 |
MS.gene99077.t1 | AT2G33735 | 43.077 | 65 | 37 | 0 | 85 | 149 | 21 | 85 | 1.99e-11 | 61.6 |
MS.gene99077.t1 | AT5G05750 | 32.743 | 113 | 75 | 1 | 75 | 187 | 103 | 214 | 2.31e-11 | 64.7 |
MS.gene99077.t1 | AT5G16650 | 45.714 | 70 | 38 | 0 | 82 | 151 | 7 | 76 | 3.39e-11 | 61.2 |
MS.gene99077.t1 | AT5G18140 | 34.711 | 121 | 64 | 3 | 37 | 150 | 28 | 140 | 7.75e-11 | 63.5 |
Find 106 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAATTTGTTTCAGGCGATTT+TGG | 0.110103 | 4.1:-74798572 | MS.gene99077:intron |
GGAGCGGCTAATTCATATTT+TGG | 0.131687 | 4.1:-74804410 | MS.gene99077:CDS |
AATCCATCATCTACTGTTAT+TGG | 0.177439 | 4.1:-74805048 | MS.gene99077:CDS |
TTGCATCGCTTACAAGTTTC+AGG | 0.178751 | 4.1:+74800831 | None:intergenic |
GGAATAAATACTTTCAAATA+TGG | 0.202915 | 4.1:-74797629 | MS.gene99077:CDS |
TTCTGACCAGGTTGGGTGCC+TGG | 0.211158 | 4.1:+74798201 | None:intergenic |
TAGTGTTTCAAAGGGGTTAT+AGG | 0.275001 | 4.1:-74805077 | MS.gene99077:CDS |
CACCACCTCCATGTACCTTT+AGG | 0.307308 | 4.1:+74799887 | None:intergenic |
GAAATAAAGAAAGCTTACTA+TGG | 0.322849 | 4.1:-74804000 | MS.gene99077:CDS |
TTTGAAGAACTGGTTGCTAT+TGG | 0.328085 | 4.1:-74804432 | MS.gene99077:CDS |
CTTTGTTCCTTTGACAACTT+TGG | 0.331164 | 4.1:+74800325 | None:intergenic |
ATAGTAAGCTTTCTTTATTT+CGG | 0.347885 | 4.1:+74804002 | None:intergenic |
TACTGGAAGTGTAAGGCTTA+AGG | 0.354174 | 4.1:-74798524 | MS.gene99077:intron |
ACCACCTCCATGTACCTTTA+GGG | 0.357234 | 4.1:+74799888 | None:intergenic |
TTGAAGAACTGGTTGCTATT+GGG | 0.372635 | 4.1:-74804431 | MS.gene99077:CDS |
GTCCAGATGTTTGTACAAAC+TGG | 0.376510 | 4.1:-74800719 | MS.gene99077:intron |
GGATCATCTTTATTTGCGTC+TGG | 0.383886 | 4.1:+74802744 | None:intergenic |
AGGAGCTATTACGATGTTCT+TGG | 0.393663 | 4.1:-74804048 | MS.gene99077:CDS |
TGTTTGAAATGACAAAGTTT+TGG | 0.411973 | 4.1:+74801030 | None:intergenic |
GGGGCAACTAGATCTATTCA+TGG | 0.412586 | 4.1:-74804389 | MS.gene99077:CDS |
TCTGACCAGGTTGGGTGCCT+GGG | 0.413133 | 4.1:+74798202 | None:intergenic |
AGAAGTTACATTGGCATATG+AGG | 0.415080 | 4.1:-74802700 | MS.gene99077:intron |
GAATAAATACTTTCAAATAT+GGG | 0.416410 | 4.1:-74797628 | MS.gene99077:CDS |
AACAACCAAAGTGGTGGTTT+CGG | 0.424450 | 4.1:-74801910 | MS.gene99077:CDS |
CTTTGACAACTTTGGCACCT+TGG | 0.428176 | 4.1:+74800333 | None:intergenic |
TCACCGGAACGGTTTGAATC+AGG | 0.428315 | 4.1:+74799856 | None:intergenic |
TGTGCTACATGCAAGGGAAC+TGG | 0.431002 | 4.1:-74800674 | MS.gene99077:CDS |
CCCCAAATGATTCGTCCTAC+TGG | 0.434059 | 4.1:-74805263 | None:intergenic |
AAAGATGTGTACGGAATGAT+TGG | 0.438202 | 4.1:+74805196 | None:intergenic |
ATGGTGTTAATTTGAAGAAC+TGG | 0.439077 | 4.1:-74804442 | MS.gene99077:CDS |
AGCAAGAGAAAACAGATAAA+CGG | 0.445056 | 4.1:-74797012 | MS.gene99077:CDS |
AACTAGATCTATTCATGGCT+CGG | 0.445228 | 4.1:-74804384 | MS.gene99077:CDS |
AGATAAACGGAAAGCTGCTT+CGG | 0.449925 | 4.1:-74796999 | MS.gene99077:CDS |
AACCACCTTCTGACCAGGTT+GGG | 0.452721 | 4.1:+74798194 | None:intergenic |
CGATGTTCTTGGTGTGAGTA+AGG | 0.456412 | 4.1:-74804037 | MS.gene99077:CDS |
GTTCACGCTGTCTTTCTGTC+AGG | 0.464716 | 4.1:+74797059 | None:intergenic |
GGTGGGAGTGGTCTTCCTCC+TGG | 0.467186 | 4.1:-74800861 | MS.gene99077:CDS |
TATATCAAGTAGTGTTTCAA+AGG | 0.471709 | 4.1:-74805086 | MS.gene99077:CDS |
GAAAGAGTGATCGACGAGTA+AGG | 0.478803 | 4.1:+74805222 | None:intergenic |
GATCCTGATTCAAACCGTTC+CGG | 0.480511 | 4.1:-74799859 | MS.gene99077:CDS |
GGTAGTAGTTATGCAACAAA+TGG | 0.489305 | 4.1:-74805027 | MS.gene99077:intron |
CATCTTTATTTGCGTCTGGA+TGG | 0.490868 | 4.1:+74802748 | None:intergenic |
AAATAAAGAAAGCTTACTAT+GGG | 0.491279 | 4.1:-74803999 | MS.gene99077:CDS |
TGCCTCCGAAACCACCACTT+TGG | 0.495412 | 4.1:+74801905 | None:intergenic |
TTCATAACCACCTTCTGACC+AGG | 0.495792 | 4.1:+74798189 | None:intergenic |
CTTACACTTCCAGTAAAAGA+TGG | 0.501677 | 4.1:+74798532 | None:intergenic |
ATATCAAGTAGTGTTTCAAA+GGG | 0.507204 | 4.1:-74805085 | MS.gene99077:CDS |
TGTAAGCGATGCAAAGGGTC+AGG | 0.507844 | 4.1:-74800822 | MS.gene99077:CDS |
GTCAAGTTGCATACTTATCC+TGG | 0.510591 | 4.1:-74800299 | MS.gene99077:intron |
GAAGTTTCAAGAAGTTACAT+TGG | 0.513562 | 4.1:-74802709 | MS.gene99077:CDS |
CCACGGAACATCTGCTCGAA+AGG | 0.515788 | 4.1:+74801868 | None:intergenic |
GGTCAGAAGGTGGTTATGAA+AGG | 0.517582 | 4.1:-74798186 | MS.gene99077:CDS |
CGAACTATTTCAGGTGGGAG+TGG | 0.521446 | 4.1:-74800873 | MS.gene99077:intron |
ACCACTTTGGTTGTTTACAT+AGG | 0.523371 | 4.1:+74801918 | None:intergenic |
TGTGGTTGAACTATCTTTCA+CGG | 0.532096 | 4.1:-74801071 | MS.gene99077:CDS |
AGTGGTGGTTTCGGAGGCAA+TGG | 0.540722 | 4.1:-74801901 | MS.gene99077:CDS |
AAAACGTCAACAGTATGATC+AGG | 0.540871 | 4.1:-74802555 | MS.gene99077:intron |
TGATCTATATGCTACTATCA+AGG | 0.542920 | 4.1:-74799836 | MS.gene99077:intron |
AGGCACCCAACCTGGTCAGA+AGG | 0.545297 | 4.1:-74798199 | MS.gene99077:CDS |
CTACCAATAACAGTAGATGA+TGG | 0.550722 | 4.1:+74805045 | None:intergenic |
ACGAGTAAGGTGAGTGAAGA+GGG | 0.551659 | 4.1:+74805235 | None:intergenic |
GTCAGAAGGTGGTTATGAAA+GGG | 0.553713 | 4.1:-74798185 | MS.gene99077:CDS |
AAGTACTTGTGCTACATGCA+AGG | 0.554627 | 4.1:-74800681 | MS.gene99077:CDS |
AATAAATACTTTCAAATATG+GGG | 0.554683 | 4.1:-74797627 | MS.gene99077:CDS |
ACTAGATCTATTCATGGCTC+GGG | 0.557340 | 4.1:-74804383 | MS.gene99077:intron |
GAAACTTGTAAGCGATGCAA+AGG | 0.557844 | 4.1:-74800828 | MS.gene99077:CDS |
AAAGGGAAAGGTATAATGAA+AGG | 0.559368 | 4.1:-74798168 | MS.gene99077:intron |
GTTCACCCAGGCACCCAACC+TGG | 0.563029 | 4.1:-74798207 | MS.gene99077:CDS |
TAACCACCTTCTGACCAGGT+TGG | 0.563337 | 4.1:+74798193 | None:intergenic |
ACCCTAAAGGTACATGGAGG+TGG | 0.565389 | 4.1:-74799889 | MS.gene99077:CDS |
ACAAACTGGAATATTCAGAA+TGG | 0.567594 | 4.1:-74800705 | MS.gene99077:CDS |
TGTCCACTTGCAGTTAGACA+TGG | 0.569909 | 4.1:-74804461 | MS.gene99077:intron |
GGTGGTTTCGGAGGCAATGG+TGG | 0.572038 | 4.1:-74801898 | MS.gene99077:CDS |
CTAAAGGTACATGGAGGTGG+TGG | 0.575599 | 4.1:-74799886 | MS.gene99077:CDS |
TCTTTCACGGAAGCTATCCA+AGG | 0.575784 | 4.1:-74801058 | MS.gene99077:CDS |
GAACTGGTTGCTATTGGGAG+CGG | 0.575920 | 4.1:-74804426 | MS.gene99077:CDS |
TCTGTTTGGCAGGTTCACCC+AGG | 0.583768 | 4.1:-74798219 | MS.gene99077:intron |
CAAGGTGCCAAAGTTGTCAA+AGG | 0.589611 | 4.1:-74800332 | MS.gene99077:CDS |
ATTTGGCGGAGAAGATGTCA+AGG | 0.593689 | 4.1:-74801181 | MS.gene99077:intron |
AGTTTCTGCAAGTCTTGCCA+AGG | 0.595904 | 4.1:-74800350 | MS.gene99077:CDS |
AACCAAAGTGGTGGTTTCGG+AGG | 0.598376 | 4.1:-74801907 | MS.gene99077:CDS |
TTACACTTCCAGTAAAAGAT+GGG | 0.600490 | 4.1:+74798533 | None:intergenic |
AAACTTGTAAGCGATGCAAA+GGG | 0.601982 | 4.1:-74800827 | MS.gene99077:CDS |
CCTTTCGAGCAGATGTTCCG+TGG | 0.604194 | 4.1:-74801868 | MS.gene99077:CDS |
AAGGTGGTTATGAAAGGGAA+AGG | 0.605101 | 4.1:-74798180 | MS.gene99077:CDS |
GATAGTAGCATATAGATCAC+CGG | 0.605615 | 4.1:+74799840 | None:intergenic |
AGACAACAATGAGACCCTAA+AGG | 0.610897 | 4.1:-74799902 | MS.gene99077:CDS |
CGCAAATAAAGATGATCCTG+AGG | 0.611520 | 4.1:-74802739 | MS.gene99077:CDS |
GACGAGTAAGGTGAGTGAAG+AGG | 0.612764 | 4.1:+74805234 | None:intergenic |
AGTACTTGTGCTACATGCAA+GGG | 0.618060 | 4.1:-74800680 | MS.gene99077:CDS |
AATGAGACCCTAAAGGTACA+TGG | 0.619370 | 4.1:-74799895 | MS.gene99077:CDS |
GTGAAGAGGGTGATGCCAGT+AGG | 0.632661 | 4.1:+74805248 | None:intergenic |
CACCCAACCTGGTCAGAAGG+TGG | 0.643969 | 4.1:-74798196 | MS.gene99077:CDS |
CTTTCACGGAAGCTATCCAA+GGG | 0.653887 | 4.1:-74801057 | MS.gene99077:CDS |
TTCGAGCAGATGTTCCGTGG+TGG | 0.661342 | 4.1:-74801865 | MS.gene99077:CDS |
TATGTAAACAACCAAAGTGG+TGG | 0.673516 | 4.1:-74801916 | MS.gene99077:CDS |
GCGATGCAAAGGGTCAGGAG+TGG | 0.682796 | 4.1:-74800817 | MS.gene99077:intron |
AAGTCATTACATGGCCACCA+CGG | 0.693473 | 4.1:+74801851 | None:intergenic |
ACTGATCGAAGAGTTTGCCA+AGG | 0.694973 | 4.1:-74797038 | MS.gene99077:CDS |
AATAAAGAAAGCTTACTATG+GGG | 0.700800 | 4.1:-74803998 | MS.gene99077:intron |
TAGCATATAGATCACCGGAA+CGG | 0.711908 | 4.1:+74799845 | None:intergenic |
AGAAGGATTAGATGTTCACG+TGG | 0.719072 | 4.1:-74799695 | MS.gene99077:CDS |
TATCAAGTAGTGTTTCAAAG+GGG | 0.720594 | 4.1:-74805084 | MS.gene99077:CDS |
GCCTATGTAAACAACCAAAG+TGG | 0.723719 | 4.1:-74801919 | MS.gene99077:CDS |
GATGTGCTTTGTAATGCTTG+TGG | 0.726079 | 4.1:-74801007 | MS.gene99077:intron |
GAGACCCTAAAGGTACATGG+AGG | 0.766540 | 4.1:-74799892 | MS.gene99077:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 74796988 | 74805279 | 74796988 | ID=MS.gene99077 |
chr4.1 | mRNA | 74796988 | 74805279 | 74796988 | ID=MS.gene99077.t1;Parent=MS.gene99077 |
chr4.1 | exon | 74805208 | 74805279 | 74805208 | ID=MS.gene99077.t1.exon1;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74805208 | 74805279 | 74805208 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
chr4.1 | exon | 74805028 | 74805109 | 74805028 | ID=MS.gene99077.t1.exon2;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74805028 | 74805109 | 74805028 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
chr4.1 | exon | 74804384 | 74804470 | 74804384 | ID=MS.gene99077.t1.exon3;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74804384 | 74804470 | 74804384 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
chr4.1 | exon | 74803999 | 74804081 | 74803999 | ID=MS.gene99077.t1.exon4;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74803999 | 74804081 | 74803999 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
chr4.1 | exon | 74802701 | 74802784 | 74802701 | ID=MS.gene99077.t1.exon5;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74802701 | 74802784 | 74802701 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
chr4.1 | exon | 74802556 | 74802594 | 74802556 | ID=MS.gene99077.t1.exon6;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74802556 | 74802594 | 74802556 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
chr4.1 | exon | 74801861 | 74801953 | 74801861 | ID=MS.gene99077.t1.exon7;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74801861 | 74801953 | 74801861 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
chr4.1 | exon | 74801182 | 74801232 | 74801182 | ID=MS.gene99077.t1.exon8;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74801182 | 74801232 | 74801182 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
chr4.1 | exon | 74801008 | 74801095 | 74801008 | ID=MS.gene99077.t1.exon9;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74801008 | 74801095 | 74801008 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
chr4.1 | exon | 74800818 | 74800882 | 74800818 | ID=MS.gene99077.t1.exon10;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74800818 | 74800882 | 74800818 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
chr4.1 | exon | 74800661 | 74800735 | 74800661 | ID=MS.gene99077.t1.exon11;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74800661 | 74800735 | 74800661 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
chr4.1 | exon | 74800300 | 74800372 | 74800300 | ID=MS.gene99077.t1.exon12;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74800300 | 74800372 | 74800300 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
chr4.1 | exon | 74799837 | 74799928 | 74799837 | ID=MS.gene99077.t1.exon13;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74799837 | 74799928 | 74799837 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
chr4.1 | exon | 74799672 | 74799743 | 74799672 | ID=MS.gene99077.t1.exon14;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74799672 | 74799743 | 74799672 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
chr4.1 | exon | 74798525 | 74798581 | 74798525 | ID=MS.gene99077.t1.exon15;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74798525 | 74798581 | 74798525 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
chr4.1 | exon | 74798169 | 74798229 | 74798169 | ID=MS.gene99077.t1.exon16;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74798169 | 74798229 | 74798169 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
chr4.1 | exon | 74797593 | 74797650 | 74797593 | ID=MS.gene99077.t1.exon17;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74797593 | 74797650 | 74797593 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
chr4.1 | exon | 74796988 | 74797084 | 74796988 | ID=MS.gene99077.t1.exon18;Parent=MS.gene99077.t1 |
chr4.1 | CDS | 74796988 | 74797084 | 74796988 | ID=cds.MS.gene99077.t1;Parent=MS.gene99077.t1 |
Gene Sequence |
Protein sequence |