AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene047125

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047125.t1 MTR_2g007780 98.895 181 2 0 1 181 48 228 2.03e-131 367
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047125.t1 AT1G25260 70.175 171 50 1 1 171 48 217 2.47e-84 248

Find 37 sgRNAs with CRISPR-Local

Find 156 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCGAAATTGAAAGAGTTT+AGG 0.242754 2.1:+74840902 MS.gene047125:CDS
CTTTGAAACTTTGTGAAGAT+TGG 0.248050 2.1:-74841016 None:intergenic
TTCGAAATTGAAAGAGTTTA+GGG 0.248422 2.1:+74840903 MS.gene047125:CDS
AGAGCAGTTCACACATGATA+TGG 0.322264 2.1:+74842413 MS.gene047125:CDS
GACTGAACCTGGTTTGTAGA+TGG 0.358071 2.1:+74843410 MS.gene047125:CDS
TTTGAAACTTTGTGAAGATT+GGG 0.382034 2.1:-74841015 None:intergenic
ACCTGAAGCATCTCGTATAC+TGG 0.389289 2.1:+74842624 MS.gene047125:CDS
GAACAGGCATGCCTTGCTTC+CGG 0.401326 2.1:-74842446 None:intergenic
AAAGTAATGCAAGTTGCTAT+TGG 0.403753 2.1:+74840967 MS.gene047125:CDS
CAGCTATTGCGTGGAGATGC+TGG 0.406333 2.1:+74841634 MS.gene047125:intron
GTACCTTTATTTAACCGAAC+AGG 0.425105 2.1:-74842462 None:intergenic
ATGCCTGTTCGGTTAAATAA+AGG 0.445190 2.1:+74842459 MS.gene047125:CDS
ACTGAACCTGGTTTGTAGAT+GGG 0.448280 2.1:+74843411 MS.gene047125:CDS
TAGGCTGTTTAATGAATTTG+AGG 0.448398 2.1:+74842003 MS.gene047125:intron
ACCAGTATACGAGATGCTTC+AGG 0.450575 2.1:-74842625 None:intergenic
TCCAAAATTCACAGGTGTTG+TGG 0.453240 2.1:+74842555 MS.gene047125:intron
GGAAGCAAGGCATGCCTGTT+CGG 0.453618 2.1:+74842448 MS.gene047125:CDS
TCATGTGTGAACTGCTCTAA+AGG 0.461609 2.1:-74842408 None:intergenic
ATGCCTTGCTTCCGGAGAAA+AGG 0.467064 2.1:-74842438 None:intergenic
GGATGCGACTTTGCAAGAAC+AGG 0.475150 2.1:+74842025 MS.gene047125:CDS
CAATCTTCACAAAGTTTCAA+AGG 0.483461 2.1:+74841017 MS.gene047125:CDS
GACTTTGTTGTTTGTGAGGA+GGG 0.491569 2.1:+74842589 MS.gene047125:CDS
GGCTACGTTTCGACTGAACC+TGG 0.495680 2.1:+74843399 MS.gene047125:CDS
GAACTCTACATTGATGGGCC+TGG 0.523108 2.1:+74843451 MS.gene047125:CDS
AGGCTGTTTAATGAATTTGA+GGG 0.523767 2.1:+74842004 MS.gene047125:intron
CTGAACCTGGTTTGTAGATG+GGG 0.535144 2.1:+74843412 MS.gene047125:CDS
CATTCAACATCTGAATCGCC+AGG 0.535824 2.1:-74843469 None:intergenic
ACTGTTTCAGGTTGAACTCA+AGG 0.537015 2.1:+74842380 MS.gene047125:intron
GCGTTTGATGGGAAATATGA+TGG 0.540790 2.1:+74843378 MS.gene047125:intron
TTCTGACTTTGTTGTTTGTG+AGG 0.545701 2.1:+74842585 MS.gene047125:CDS
TGACTTTGTTGTTTGTGAGG+AGG 0.559551 2.1:+74842588 MS.gene047125:CDS
TGTCTAAAGAAGAAGTTGAA+AGG 0.565730 2.1:+74841674 MS.gene047125:CDS
CAGAACCCCATCTACAAACC+AGG 0.589817 2.1:-74843417 None:intergenic
CGAGATGCTTCAGGTGACAA+AGG 0.595978 2.1:-74842616 None:intergenic
GGTTTGTAGATGGGGTTCTG+AGG 0.610326 2.1:+74843420 MS.gene047125:CDS
TTTCAGGTTGAACTCAAGGA+GGG 0.645581 2.1:+74842384 MS.gene047125:intron
GTTTCAGGTTGAACTCAAGG+AGG 0.696156 2.1:+74842383 MS.gene047125:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAATCAAACCAAA+CGG - chr2.1:74841244-74841263 None:intergenic 15.0%
!! AACTAAAAAGTAATTAATGA+TGG - chr2.1:74843065-74843084 None:intergenic 15.0%
!! ACATAAAAATGAAAGATATA+GGG - chr2.1:74842921-74842940 None:intergenic 15.0%
!! ATATTCATAAAAAATGTAAG+AGG - chr2.1:74841586-74841605 None:intergenic 15.0%
!! TACATAAAAATGAAAGATAT+AGG - chr2.1:74842922-74842941 None:intergenic 15.0%
!!! TTTGTTTTATTTTTTTGTTG+TGG + chr2.1:74841069-74841088 MS.gene047125:intron 15.0%
!!! TTTTTATTGATGCTATTTAT+AGG + chr2.1:74841984-74842003 MS.gene047125:intron 15.0%
!! AAAAAGTAATTAATGATGGT+GGG - chr2.1:74843061-74843080 None:intergenic 20.0%
!! AAATAGCATCAATAAAAATC+AGG - chr2.1:74841982-74842001 None:intergenic 20.0%
!! AAGAAAATGACATAATTGAA+TGG + chr2.1:74842194-74842213 MS.gene047125:intron 20.0%
!! ATTAATTACTTCAATAACCA+AGG - chr2.1:74843250-74843269 None:intergenic 20.0%
!! CAAATTTAATGTACGATTAT+TGG + chr2.1:74841741-74841760 MS.gene047125:intron 20.0%
!! GAAATTAGTAACACTAAATA+TGG - chr2.1:74842818-74842837 None:intergenic 20.0%
!! TAAAAAGTAATTAATGATGG+TGG - chr2.1:74843062-74843081 None:intergenic 20.0%
!! TGATGTACATACTATAATAA+TGG - chr2.1:74843317-74843336 None:intergenic 20.0%
!!! AATTTTGCTTGAATAAACAT+TGG + chr2.1:74841877-74841896 MS.gene047125:intron 20.0%
!!! ATGCAAATAAATAAGCTTTT+AGG + chr2.1:74841288-74841307 MS.gene047125:intron 20.0%
!!! ATGTGATTTTGATTAGTTTT+TGG + chr2.1:74841101-74841120 MS.gene047125:intron 20.0%
!!! TATTTAGTGTTACTAATTTC+AGG + chr2.1:74842818-74842837 MS.gene047125:intron 20.0%
!!! TCATTTTCTTAAATCATTAC+CGG - chr2.1:74842184-74842203 None:intergenic 20.0%
!!! TTGAAGTAATTAATTAGTCT+CGG + chr2.1:74843256-74843275 MS.gene047125:intron 20.0%
!!! TTTTTGAAAATCTGTAACAA+AGG + chr2.1:74841488-74841507 MS.gene047125:intron 20.0%
! AGCTAAAATTGTATCTTCAT+CGG + chr2.1:74841331-74841350 MS.gene047125:intron 25.0%
! ATTATAGGTTTCTACTAACA+AGG - chr2.1:74842121-74842140 None:intergenic 25.0%
! ATTCGAAATTGAAAGAGTTT+AGG + chr2.1:74840902-74840921 MS.gene047125:CDS 25.0%
! CAAACAAGAAAAAATCAATG+GGG - chr2.1:74842970-74842989 None:intergenic 25.0%
! CCAAACAAGAAAAAATCAAT+GGG - chr2.1:74842971-74842990 None:intergenic 25.0%
! GAAATGGAGAGAATAATAAA+TGG + chr2.1:74843124-74843143 MS.gene047125:intron 25.0%
! TAAAAATGAAAGATATAGGG+AGG - chr2.1:74842918-74842937 None:intergenic 25.0%
! TATAGTAGCTGATATTCAAT+TGG + chr2.1:74841809-74841828 MS.gene047125:intron 25.0%
! TATTATTGATAAGCTTGTCA+AGG - chr2.1:74841376-74841395 None:intergenic 25.0%
! TTCGAAATTGAAAGAGTTTA+GGG + chr2.1:74840903-74840922 MS.gene047125:CDS 25.0%
!! ACTCATTCAATTAAAAGTGT+TGG + chr2.1:74842252-74842271 MS.gene047125:intron 25.0%
!! ATTTTGAACTCTACATTGAT+GGG + chr2.1:74843446-74843465 MS.gene047125:CDS 25.0%
!! CTGATATTCAATTGGTAATT+TGG + chr2.1:74841817-74841836 MS.gene047125:intron 25.0%
!! TATAATAATGGTGCTAATTG+AGG - chr2.1:74843305-74843324 None:intergenic 25.0%
!! TTTGAAACTTTGTGAAGATT+GGG - chr2.1:74841018-74841037 None:intergenic 25.0%
!!! ATCGTTAACCTTTTTCAATA+GGG + chr2.1:74841900-74841919 MS.gene047125:intron 25.0%
!!! CCATTGATTTTTTCTTGTTT+GGG + chr2.1:74842969-74842988 MS.gene047125:intron 25.0%
!!! GTCAATTATTAGTCTTCAAT+TGG - chr2.1:74842532-74842551 None:intergenic 25.0%
!!! TTGGAGATTTTTAAGAAAAG+CGG + chr2.1:74841120-74841139 MS.gene047125:intron 25.0%
AAAGTAATGCAAGTTGCTAT+TGG + chr2.1:74840967-74840986 MS.gene047125:CDS 30.0%
ACAAAATAAGCCAATCCAAA+CGG + chr2.1:74841425-74841444 MS.gene047125:intron 30.0%
ACATCATCAACGTTATAATG+TGG + chr2.1:74843331-74843350 MS.gene047125:intron 30.0%
AGGCTGTTTAATGAATTTGA+GGG + chr2.1:74842004-74842023 MS.gene047125:intron 30.0%
CAATCTTCACAAAGTTTCAA+AGG + chr2.1:74841017-74841036 MS.gene047125:CDS 30.0%
CATCAATAAAAATCAGGTTC+TGG - chr2.1:74841976-74841995 None:intergenic 30.0%
CCCAAACAAGAAAAAATCAA+TGG - chr2.1:74842972-74842991 None:intergenic 30.0%
CTGATATTGCAAGTTCTATT+GGG - chr2.1:74842712-74842731 None:intergenic 30.0%
GATATGCTAAACATGTTTCT+GGG + chr2.1:74841849-74841868 MS.gene047125:intron 30.0%
GGATAATGTGAACAATCAAA+TGG - chr2.1:74842949-74842968 None:intergenic 30.0%
TAGGCTGTTTAATGAATTTG+AGG + chr2.1:74842003-74842022 MS.gene047125:intron 30.0%
TGACACATAAAATAGACAGT+GGG + chr2.1:74843017-74843036 MS.gene047125:intron 30.0%
TGATATGCTAAACATGTTTC+TGG + chr2.1:74841848-74841867 MS.gene047125:intron 30.0%
TGTCTAAAGAAGAAGTTGAA+AGG + chr2.1:74841674-74841693 MS.gene047125:CDS 30.0%
TTGACACATAAAATAGACAG+TGG + chr2.1:74843016-74843035 MS.gene047125:intron 30.0%
! ATATGCTAAACATGTTTCTG+GGG + chr2.1:74841850-74841869 MS.gene047125:intron 30.0%
! GATTTTGAACTCTACATTGA+TGG + chr2.1:74843445-74843464 MS.gene047125:CDS 30.0%
!! ATTATTAGTCTTCAATTGGC+AGG - chr2.1:74842528-74842547 None:intergenic 30.0%
!! ATTTTCTGAGAAGCTACTAA+TGG + chr2.1:74841217-74841236 MS.gene047125:intron 30.0%
!! CTTTGAAACTTTGTGAAGAT+TGG - chr2.1:74841019-74841038 None:intergenic 30.0%
!! CTTTTAATTGAATGAGTGTC+TGG - chr2.1:74842249-74842268 None:intergenic 30.0%
!! TTTTCTGAGAAGCTACTAAT+GGG + chr2.1:74841218-74841237 MS.gene047125:intron 30.0%
!!! CATTTGAGAAGTTGTTTTTC+AGG - chr2.1:74841452-74841471 None:intergenic 30.0%
!!! CCCATTGATTTTTTCTTGTT+TGG + chr2.1:74842968-74842987 MS.gene047125:intron 30.0%
!!! CTAGATTCAACCTACTTTTT+CGG - chr2.1:74842062-74842081 None:intergenic 30.0%
!!! GATCGTTAACCTTTTTCAAT+AGG + chr2.1:74841899-74841918 MS.gene047125:intron 30.0%
!!! TCAAGTAGCAAGTTTTTTCT+TGG + chr2.1:74840937-74840956 MS.gene047125:CDS 30.0%
!!! TCGTTAACCTTTTTCAATAG+GGG + chr2.1:74841901-74841920 MS.gene047125:intron 30.0%
!!! TGATTTTTTCTTGTTTGGGT+GGG + chr2.1:74842973-74842992 MS.gene047125:intron 30.0%
!!! TTGATTTTTTCTTGTTTGGG+TGG + chr2.1:74842972-74842991 MS.gene047125:intron 30.0%
AATAACCAAGGTCAAGATGT+TGG - chr2.1:74843238-74843257 None:intergenic 35.0%
AATAACTACTTCCTGCCTAT+GGG + chr2.1:74842784-74842803 MS.gene047125:intron 35.0%
AATATGGTCGAATAACCCAT+AGG - chr2.1:74842802-74842821 None:intergenic 35.0%
ATAGGCAGGAAGTAGTTATT+AGG - chr2.1:74842784-74842803 None:intergenic 35.0%
ATCTCTCCAAATGGATGAAA+TGG + chr2.1:74843108-74843127 MS.gene047125:intron 35.0%
ATGCCTGTTCGGTTAAATAA+AGG + chr2.1:74842459-74842478 MS.gene047125:CDS 35.0%
CAAAATAAGCCAATCCAAAC+GGG + chr2.1:74841426-74841445 MS.gene047125:intron 35.0%
CCAATAGAACTTGCAATATC+AGG + chr2.1:74842710-74842729 MS.gene047125:intron 35.0%
CCTGATATTGCAAGTTCTAT+TGG - chr2.1:74842713-74842732 None:intergenic 35.0%
GGAGAGAATAATAAATGGAG+AGG + chr2.1:74843129-74843148 MS.gene047125:intron 35.0%
TAATAACTACTTCCTGCCTA+TGG + chr2.1:74842783-74842802 MS.gene047125:intron 35.0%
TGTGTCTATATCTCTCCAAA+TGG + chr2.1:74843099-74843118 MS.gene047125:intron 35.0%
TTCTCTCCATTTCATCCATT+TGG - chr2.1:74843117-74843136 None:intergenic 35.0%
TTGAATGGAATCACACATGT+CGG + chr2.1:74842209-74842228 MS.gene047125:intron 35.0%
TTGACGTTTCCAAAATTCAC+AGG + chr2.1:74842547-74842566 MS.gene047125:intron 35.0%
TTTCAAGATCTGACTGTTTC+AGG + chr2.1:74842368-74842387 MS.gene047125:intron 35.0%
! ATGATATGGAACCTTTTCTC+CGG + chr2.1:74842427-74842446 MS.gene047125:CDS 35.0%
! GTACCTTTATTTAACCGAAC+AGG - chr2.1:74842465-74842484 None:intergenic 35.0%
!! TAAAAGTGTTGGTGCTACAA+AGG + chr2.1:74842263-74842282 MS.gene047125:intron 35.0%
!! TTCTGACTTTGTTGTTTGTG+AGG + chr2.1:74842585-74842604 MS.gene047125:CDS 35.0%
!!! CGTTAACCTTTTTCAATAGG+GGG + chr2.1:74841902-74841921 MS.gene047125:intron 35.0%
!!! GTTAACCTTTTTCAATAGGG+GGG + chr2.1:74841903-74841922 MS.gene047125:intron 35.0%
AAGATAGAACGAAGTGGAGT+AGG + chr2.1:74842844-74842863 MS.gene047125:intron 40.0%
ACTCCACTTCGTTCTATCTT+TGG - chr2.1:74842844-74842863 None:intergenic 40.0%
AGAGCAGTTCACACATGATA+TGG + chr2.1:74842413-74842432 MS.gene047125:CDS 40.0%
AGTGGGTCCTACTATTATGT+GGG + chr2.1:74843034-74843053 MS.gene047125:intron 40.0%
AGTTGAAGTTGCACTACTCT+AGG + chr2.1:74842741-74842760 MS.gene047125:intron 40.0%
GAAAACCCCCCTATTGAAAA+AGG - chr2.1:74841911-74841930 None:intergenic 40.0%
GCGTTTGATGGGAAATATGA+TGG + chr2.1:74843378-74843397 MS.gene047125:intron 40.0%
GTTGAAGTTGCACTACTCTA+GGG + chr2.1:74842742-74842761 MS.gene047125:intron 40.0%
TCATGTGTGAACTGCTCTAA+AGG - chr2.1:74842411-74842430 None:intergenic 40.0%
TCTATCCAACATCTTGACCT+TGG + chr2.1:74843230-74843249 MS.gene047125:intron 40.0%
TGTCTGTGTAGGTGCATTAT+AGG - chr2.1:74842136-74842155 None:intergenic 40.0%
! ACTGAACCTGGTTTGTAGAT+GGG + chr2.1:74843411-74843430 MS.gene047125:CDS 40.0%
! TCCAAAATTCACAGGTGTTG+TGG + chr2.1:74842555-74842574 MS.gene047125:intron 40.0%
! TCCACAACACCTGTGAATTT+TGG - chr2.1:74842559-74842578 None:intergenic 40.0%
! TGCTTTTGACAGCGTTTGAT+GGG + chr2.1:74843367-74843386 MS.gene047125:intron 40.0%
!! ACTGTTTCAGGTTGAACTCA+AGG + chr2.1:74842380-74842399 MS.gene047125:intron 40.0%
!! GACTTTGTTGTTTGTGAGGA+GGG + chr2.1:74842589-74842608 MS.gene047125:CDS 40.0%
!! GTTTTGTTACAGCTATTGCG+TGG + chr2.1:74841625-74841644 MS.gene047125:intron 40.0%
!! TCGACATGTCAGTGTTGTTT+CGG - chr2.1:74842159-74842178 None:intergenic 40.0%
!! TGACTTTGTTGTTTGTGAGG+AGG + chr2.1:74842588-74842607 MS.gene047125:CDS 40.0%
!! TTTCAGGTTGAACTCAAGGA+GGG + chr2.1:74842384-74842403 MS.gene047125:intron 40.0%
!!! GATTCAACCTACTTTTTCGG+TGG - chr2.1:74842059-74842078 None:intergenic 40.0%
ACCAGTATACGAGATGCTTC+AGG - chr2.1:74842628-74842647 None:intergenic 45.0%
AGCATTGCCACCGAAAAAGT+AGG + chr2.1:74842049-74842068 MS.gene047125:intron 45.0%
AGGCCAAAGATAGAACGAAG+TGG + chr2.1:74842838-74842857 MS.gene047125:intron 45.0%
ATAGCACAGAGCAGAGGATT+TGG - chr2.1:74842667-74842686 None:intergenic 45.0%
ATGGAGAGGATCTTAACTCG+TGG + chr2.1:74843143-74843162 MS.gene047125:intron 45.0%
CAGTGGGTCCTACTATTATG+TGG + chr2.1:74843033-74843052 MS.gene047125:intron 45.0%
CATTCAACATCTGAATCGCC+AGG - chr2.1:74843472-74843491 None:intergenic 45.0%
GAGCAACTACAGGATATGTC+AGG - chr2.1:74842304-74842323 None:intergenic 45.0%
TAGCACAGAGCAGAGGATTT+GGG - chr2.1:74842666-74842685 None:intergenic 45.0%
TGGAGAGGATCTTAACTCGT+GGG + chr2.1:74843144-74843163 MS.gene047125:intron 45.0%
TTTGGGTGGGTAGTGCAATT+TGG + chr2.1:74842986-74843005 MS.gene047125:intron 45.0%
! ACCTGAAGCATCTCGTATAC+TGG + chr2.1:74842624-74842643 MS.gene047125:CDS 45.0%
! CTGAACCTGGTTTGTAGATG+GGG + chr2.1:74843412-74843431 MS.gene047125:CDS 45.0%
! GACTGAACCTGGTTTGTAGA+TGG + chr2.1:74843410-74843429 MS.gene047125:CDS 45.0%
! TGTGCTGGCGAACATAAATG+TGG + chr2.1:74842686-74842705 MS.gene047125:intron 45.0%
!! CTGCTTTTGACAGCGTTTGA+TGG + chr2.1:74843366-74843385 MS.gene047125:intron 45.0%
!! GTTTCAGGTTGAACTCAAGG+AGG + chr2.1:74842383-74842402 MS.gene047125:intron 45.0%
!! TGTTGTTTCGGTGTCTGTGT+AGG - chr2.1:74842147-74842166 None:intergenic 45.0%
!!! AGTTGTTTTTCAGGCCCGTT+TGG - chr2.1:74841443-74841462 None:intergenic 45.0%
!!! TTTTTCAGGCCCGTTTGGAT+TGG - chr2.1:74841438-74841457 None:intergenic 45.0%
ATGCCTTGCTTCCGGAGAAA+AGG - chr2.1:74842441-74842460 None:intergenic 50.0%
CAACACTGACATGTCGACAC+CGG + chr2.1:74842162-74842181 MS.gene047125:intron 50.0%
CAGAACCCCATCTACAAACC+AGG - chr2.1:74843420-74843439 None:intergenic 50.0%
CCAGATGCATGAGCAACTAC+AGG - chr2.1:74842314-74842333 None:intergenic 50.0%
CCTGTAGTTGCTCATGCATC+TGG + chr2.1:74842311-74842330 MS.gene047125:intron 50.0%
CGAGATGCTTCAGGTGACAA+AGG - chr2.1:74842619-74842638 None:intergenic 50.0%
GAGAGGATCTTAACTCGTGG+GGG + chr2.1:74843146-74843165 MS.gene047125:intron 50.0%
GGAGAGGATCTTAACTCGTG+GGG + chr2.1:74843145-74843164 MS.gene047125:intron 50.0%
GGATGCGACTTTGCAAGAAC+AGG + chr2.1:74842025-74842044 MS.gene047125:CDS 50.0%
GGTGGGACCCACATAATAGT+AGG - chr2.1:74843044-74843063 None:intergenic 50.0%
GGTTTGTAGATGGGGTTCTG+AGG + chr2.1:74843420-74843439 MS.gene047125:CDS 50.0%
TGGTCGAATAACCCATAGGC+AGG - chr2.1:74842798-74842817 None:intergenic 50.0%
! GAACCTTTTCTCCGGAAGCA+AGG + chr2.1:74842435-74842454 MS.gene047125:CDS 50.0%
! GAACTCTACATTGATGGGCC+TGG + chr2.1:74843451-74843470 MS.gene047125:CDS 50.0%
! GAAGCTACTAATGGGCCGTT+TGG + chr2.1:74841226-74841245 MS.gene047125:intron 50.0%
CAGCACATAGCACAGAGCAG+AGG - chr2.1:74842673-74842692 None:intergenic 55.0%
CAGCTATTGCGTGGAGATGC+TGG + chr2.1:74841634-74841653 MS.gene047125:intron 55.0%
CTCTGCTCTGTGCTATGTGC+TGG + chr2.1:74842671-74842690 MS.gene047125:intron 55.0%
GAACAGGCATGCCTTGCTTC+CGG - chr2.1:74842449-74842468 None:intergenic 55.0%
GGAAGCAAGGCATGCCTGTT+CGG + chr2.1:74842448-74842467 MS.gene047125:CDS 55.0%
GGCTACGTTTCGACTGAACC+TGG + chr2.1:74843399-74843418 MS.gene047125:CDS 55.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 74840895 74843492 74840895 ID=MS.gene047125
chr2.1 mRNA 74840895 74843492 74840895 ID=MS.gene047125.t1;Parent=MS.gene047125
chr2.1 exon 74840895 74841038 74840895 ID=MS.gene047125.t1.exon1;Parent=MS.gene047125.t1
chr2.1 CDS 74840895 74841038 74840895 ID=cds.MS.gene047125.t1;Parent=MS.gene047125.t1
chr2.1 exon 74841637 74841695 74841637 ID=MS.gene047125.t1.exon2;Parent=MS.gene047125.t1
chr2.1 CDS 74841637 74841695 74841637 ID=cds.MS.gene047125.t1;Parent=MS.gene047125.t1
chr2.1 exon 74842006 74842066 74842006 ID=MS.gene047125.t1.exon3;Parent=MS.gene047125.t1
chr2.1 CDS 74842006 74842066 74842006 ID=cds.MS.gene047125.t1;Parent=MS.gene047125.t1
chr2.1 exon 74842390 74842480 74842390 ID=MS.gene047125.t1.exon4;Parent=MS.gene047125.t1
chr2.1 CDS 74842390 74842480 74842390 ID=cds.MS.gene047125.t1;Parent=MS.gene047125.t1
chr2.1 exon 74842569 74842645 74842569 ID=MS.gene047125.t1.exon5;Parent=MS.gene047125.t1
chr2.1 CDS 74842569 74842645 74842569 ID=cds.MS.gene047125.t1;Parent=MS.gene047125.t1
chr2.1 exon 74843379 74843492 74843379 ID=MS.gene047125.t1.exon6;Parent=MS.gene047125.t1
chr2.1 CDS 74843379 74843492 74843379 ID=cds.MS.gene047125.t1;Parent=MS.gene047125.t1
Gene Sequence

>MS.gene047125

ATGAGAAATTCGAAATTGAAAGAGTTTAGGGAACAATTACAATCAAGTAGCAAGTTTTTTCTTGGATCTAACAAAGTAATGCAAGTTGCTATTGGTCGTTCTGCTTCTGATGAAATCAAACCCAATCTTCACAAAGTTTCAAAGGTTGTTTTGTCTTGCAATATCGTTCTGTTTTTTGTTTTATTTTTTTGTTGTGGATTAGAAAAATGTGATTTTGATTAGTTTTTGGAGATTTTTAAGAAAAGCGGAAGCTGCTTTGTGTTATTTTACTTGAATGATAATCATTTTGCGTTTTTCTGTTGTAAAATTAGTTCTGAAAATGATTTTCTGAGAAGCTACTAATGGGCCGTTTGGTTTGATTTTTTTTTTTTTAATCTTATGAAAAAATAGCTTATGCAAATAAATAAGCTTTTAGGTTAATTCACGAGTTCTCACTAGCTAAAATTGTATCTTCATCGGTTGTTTTTTTCATAAACTACCTTGACAAGCTTATCAATAATACATAAAAGCTTATTTATTTGCATAAGCTCACAAAATAAGCCAATCCAAACGGGCCTGAAAAACAACTTCTCAAATGAAGCAGTTTTTAGATTTTTTTGAAAATCTGTAACAAAGGATTCAAAACTAGTATAAGTTATTATTTTGTTTAACAAAAGTGATTTTTTCATGAAAAAGTTGTAACAAACAGCCTCTTACATTTTTTATGAATATTTTCTTATTGTACTTTTTTGTTTTGTTACAGCTATTGCGTGGAGATGCTGGAATGATTTTTACGAATTTGTCTAAAGAAGAAGTTGAAAGGTAATTGATTTTTGAACTGCAAGTTTAGTTATGCATAGAAATGAGCAAATTTAATGTACGATTATTGGTCTGTGCAGCATATATGTATGTGTTCTTTGTCTATGTAACTGTCTTATAGTAGCTGATATTCAATTGGTAATTTGGCATGCTATTGATATGCTAAACATGTTTCTGGGGTGAAAATTTTGCTTGAATAAACATTGGATCGTTAACCTTTTTCAATAGGGGGGTTTTCTTGAGATGCTTGAAATGTCTCATCTCATTGTTCTTTATTTGACCAGAACCTGATTTTTATTGATGCTATTTATAGGCTGTTTAATGAATTTGAGGGATGCGACTTTGCAAGAACAGGAAGCATTGCCACCGAAAAAGTAGGTTGAATCTAGTTCATTATTAACTTAATGTTTATTTTTATACAAATGCCTTGTTAGTAGAAACCTATAATGCACCTACACAGACACCGAAACAACACTGACATGTCGACACCGGTAATGATTTAAGAAAATGACATAATTGAATGGAATCACACATGTCGGTGTTATGTTCGATACCAGACACTCATTCAATTAAAAGTGTTGGTGCTACAAAGGTAGAAACTATTTCATCCTGACATATCCTGTAGTTGCTCATGCATCTGGCATGTGTTGAATATTTAGTAAATAAAACTCATACTTTCAAGATCTGACTGTTTCAGGTTGAACTCAAGGAGGGTCCTTTAGAGCAGTTCACACATGATATGGAACCTTTTCTCCGGAAGCAAGGCATGCCTGTTCGGTTAAATAAAGGTACACTATAGACTGCATTGTTTTGTAATTATTTTTTAAGTGAACCTGCCAATTGAAGACTAATAATTGACGTTTCCAAAATTCACAGGTGTTGTGGAGCTTGTTTCTGACTTTGTTGTTTGTGAGGAGGGAAAGCCTTTGTCACCTGAAGCATCTCGTATACTGGTTAGTTGTTGTTATTACCCAAATCCTCTGCTCTGTGCTATGTGCTGGCGAACATAAATGTGGCCCAATAGAACTTGCAATATCAGGACTTCGAAAGTTGAAGTTGCACTACTCTAGGGATGACTCACACTTCAACCTAATAACTACTTCCTGCCTATGGGTTATTCGACCATATTTAGTGTTACTAATTTCAGGCCAAAGATAGAACGAAGTGGAGTAGGATGATTTTTTGATTGTGAGAACATTGAAAAATTTTAACATGATTTTTTCCTCCCTATATCTTTCATTTTTATGTAGCGACCATTTGATTGTTCACATTATCCCCATTGATTTTTTCTTGTTTGGGTGGGTAGTGCAATTTGGAGAGAGATTGACACATAAAATAGACAGTGGGTCCTACTATTATGTGGGTCCCACCATCATTAATTACTTTTTAGTTTTTCGAAATTTTTGTGTGTCTATATCTCTCCAAATGGATGAAATGGAGAGAATAATAAATGGAGAGGATCTTAACTCGTGGGGGATGTGAATATAAAAATGATGCATATATTTTTGTTTCTTTGTTAAATTCTCAATAGTAATGTTCTATCCAACATCTTGACCTTGGTTATTGAAGTAATTAATTAGTCTCGGTTAGCAATAAGTATATAAGCTCACCTCAATTAGCACCATTATTATAGTATGTACATCATCAACGTTATAATGTGGCTGACATTGTTGCTGCTTTTGACAGCGTTTGATGGGAAATATGATGGCTACGTTTCGACTGAACCTGGTTTGTAGATGGGGTTCTGAGGATGATTTTGAACTCTACATTGATGGGCCTGGCGATTCAGATGTTGAATGA
Protein sequence

>MS.gene047125.t1

MRNSKLKEFREQLQSSSKFFLGSNKVMQVAIGRSASDEIKPNLHKVSKLLRGDAGMIFTNLSKEEVERLFNEFEGCDFARTGSIATEKVELKEGPLEQFTHDMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEASRILRLMGNMMATFRLNLVCRWGSEDDFELYIDGPGDSDVE