AlfalfaGEDB | MS.gene047803

M. sativa cultivar XinJiangDaYe / MS.gene047803

KEGG: -
GO: GO:0003674 GO:0003824 GO:0016787
PFAM: PF07859.16

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene047803.t1	AES90204.1	97.5	321	8	0	1	321	1	321	1.80E-188	668.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene047803.t1	Q9SMN0	48.1	322	158	6	8	320	1	322	4.7e-89	329.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene047803.t1	G7JMF0	97.5	321	8	0	1	321	1	321	1.3e-188	668.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene047803	MS.gene053480	PPI
MS.gene047803	MS.gene047804	PPI
MS.gene047803	MS.gene051907	PPI
MS.gene047803	MS.gene054628	PPI
MS.gene38730	MS.gene047803	PPI
MS.gene047803	MS.gene23641	PPI
MS.gene047803	MS.gene019398	PPI
MS.gene047803	MS.gene23639	PPI
MS.gene047803	MS.gene26528	PPI
MS.gene047803	MS.gene012997	PPI
MS.gene047803	MS.gene051696	PPI
MS.gene047803	MS.gene019395	PPI
MS.gene047803	MS.gene053470	PPI
MS.gene047803	MS.gene23638	PPI
MS.gene047803	MS.gene37504	PPI
MS.gene047803	MS.gene37505	PPI
MS.gene39628	MS.gene047803	PPI
MS.gene047803	MS.gene019397	PPI
MS.gene047803	MS.gene053479	PPI
MS.gene047803	MS.gene022960	PPI
MS.gene047803	MS.gene26527	PPI
MS.gene87834	MS.gene047803	PPI
MS.gene047803	MS.gene39627	PPI
MS.gene047803	MS.gene26526	PPI
MS.gene047803	MS.gene047802	PPI
MS.gene047803	MS.gene48487	PPI
MS.gene047803	MS.gene23692	PPI
MS.gene047803	MS.gene39628	PPI
MS.gene047803	MS.gene87832	PPI
MS.gene047803	MS.gene23057	PPI
MS.gene87835	MS.gene047803	PPI
MS.gene047803	MS.gene37503	PPI
MS.gene047803	MS.gene007061	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene047803.t1	MTR_4g086480	97.508	321	8	0	1	321	1	321	0.0	653
MS.gene047803.t1	MTR_4g086470	82.555	321	55	1	1	321	1	320	0.0	540
MS.gene047803.t1	MTR_4g086510	63.551	321	110	3	1	318	1	317	1.34e-158	446
MS.gene047803.t1	MTR_7g056207	62.222	315	116	2	10	321	38	352	1.68e-152	432
MS.gene047803.t1	MTR_3g450680	42.988	328	176	6	2	319	6	332	6.01e-91	275
MS.gene047803.t1	MTR_5g005850	41.033	329	180	8	1	318	3	328	1.31e-90	273
MS.gene047803.t1	MTR_4g086540	43.810	315	157	4	4	318	10	304	9.12e-90	271
MS.gene047803.t1	MTR_3g101420	41.975	324	172	5	1	318	1	314	1.16e-89	271
MS.gene047803.t1	MTR_1g105020	42.988	328	171	9	1	318	1	322	1.43e-86	263
MS.gene047803.t1	MTR_8g040860	42.089	316	175	6	11	319	15	329	1.79e-83	255
MS.gene047803.t1	MTR_5g005920	39.640	333	185	10	1	319	1	331	3.45e-79	244
MS.gene047803.t1	MTR_5g005900	40.244	328	179	8	5	318	2	326	4.78e-74	231
MS.gene047803.t1	MTR_7g051020	39.264	326	189	6	1	318	1	325	2.25e-72	227
MS.gene047803.t1	MTR_1g104930	41.104	326	180	7	1	318	1	322	4.06e-71	223
MS.gene047803.t1	MTR_1g104933	43.841	276	144	6	49	318	46	316	3.59e-64	205
MS.gene047803.t1	MTR_4g050140	33.533	334	184	9	5	319	2	316	1.46e-51	173
MS.gene047803.t1	MTR_1g012430	35.831	307	181	8	20	319	11	308	5.00e-51	171
MS.gene047803.t1	MTR_1g111280	32.895	304	187	5	12	303	26	324	4.57e-47	162
MS.gene047803.t1	MTR_7g406880	32.013	303	183	8	19	300	28	328	1.58e-42	150
MS.gene047803.t1	MTR_7g107040	30.794	315	205	7	12	318	7	316	1.39e-40	144
MS.gene047803.t1	MTR_1g102160	33.460	263	146	7	20	270	19	264	2.00e-39	141
MS.gene047803.t1	MTR_3g012440	30.627	271	173	4	62	319	73	341	2.26e-38	139
MS.gene047803.t1	MTR_6g464120	35.060	251	152	6	20	263	24	270	4.28e-37	139
MS.gene047803.t1	MTR_6g464320	31.650	297	176	11	39	318	39	325	3.14e-36	133
MS.gene047803.t1	MTR_8g035520	30.968	310	201	6	20	320	21	326	6.31e-36	132
MS.gene047803.t1	MTR_6g065110	31.034	290	177	6	43	318	54	334	7.90e-36	132
MS.gene047803.t1	MTR_6g065120	31.864	295	177	6	39	318	50	335	1.29e-35	132
MS.gene047803.t1	MTR_8g035540	32.188	320	190	10	20	321	9	319	6.87e-35	129
MS.gene047803.t1	MTR_6g065430	32.646	291	178	7	37	318	46	327	1.42e-34	129
MS.gene047803.t1	MTR_1g089310	32.540	252	150	8	74	318	102	340	2.79e-34	128
MS.gene047803.t1	MTR_1g089310	32.540	252	150	8	74	318	118	356	2.82e-34	129
MS.gene047803.t1	MTR_6g065340	31.034	290	169	6	39	318	60	328	9.29e-34	127
MS.gene047803.t1	MTR_6g464280	32.028	281	164	9	39	301	38	309	1.17e-33	126
MS.gene047803.t1	MTR_6g065270	31.104	299	177	8	39	318	47	335	1.84e-33	126
MS.gene047803.t1	MTR_6g065400	30.612	294	181	6	39	318	49	333	2.25e-33	125
MS.gene047803.t1	MTR_6g464510	30.744	309	183	10	28	318	31	326	3.39e-33	125
MS.gene047803.t1	MTR_7g093950	30.888	259	150	8	74	318	103	346	6.27e-33	125
MS.gene047803.t1	MTR_6g065370	30.612	294	181	6	39	318	49	333	4.65e-32	122
MS.gene047803.t1	MTR_1g102170	30.272	294	175	9	6	280	22	304	1.48e-31	120
MS.gene047803.t1	MTR_8g035500	30.241	291	186	7	39	318	33	317	4.68e-31	119
MS.gene047803.t1	MTR_0007s0520	29.126	309	192	8	26	318	27	324	7.20e-31	119
MS.gene047803.t1	MTR_1g082210	28.808	302	181	11	37	318	53	340	1.26e-29	115
MS.gene047803.t1	MTR_6g022710	27.863	262	145	11	75	297	158	414	1.24e-14	74.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene047803.t1	AT1G47480	48.125	320	153	5	1	318	1	309	3.21e-103	305
MS.gene047803.t1	AT3G48690	47.988	323	159	6	8	321	1	323	4.30e-102	303
MS.gene047803.t1	AT3G48700	44.848	330	162	7	8	320	1	327	1.13e-100	299
MS.gene047803.t1	AT1G19190	46.372	317	162	5	8	319	1	314	4.60e-100	297
MS.gene047803.t1	AT2G03550	46.006	313	164	4	8	318	1	310	1.49e-99	296
MS.gene047803.t1	AT1G49660	47.649	319	161	5	8	320	1	319	3.78e-95	285
MS.gene047803.t1	AT1G49650	44.660	309	164	6	18	320	67	374	5.72e-90	273
MS.gene047803.t1	AT1G49640	44.481	308	158	7	18	318	12	313	8.89e-87	263
MS.gene047803.t1	AT1G68620	30.693	303	193	7	5	300	16	308	3.08e-42	149
MS.gene047803.t1	AT5G16080	30.915	317	191	10	12	314	28	330	1.27e-39	142
MS.gene047803.t1	AT5G06570	31.661	319	205	7	11	318	9	325	3.36e-38	138
MS.gene047803.t1	AT5G06570	31.661	319	205	7	11	318	9	325	3.36e-38	138
MS.gene047803.t1	AT5G06570	31.661	319	205	7	11	318	24	340	5.94e-38	138
MS.gene047803.t1	AT5G06570	31.661	319	205	7	11	318	24	340	5.94e-38	138
MS.gene047803.t1	AT2G45600	29.808	312	196	8	20	319	16	316	5.77e-33	124
MS.gene047803.t1	AT2G45610	31.507	292	182	7	39	318	38	323	5.92e-33	124
MS.gene047803.t1	AT5G27320	27.815	302	187	9	37	320	53	341	5.64e-32	122
MS.gene047803.t1	AT3G05120	28.094	299	182	10	42	320	58	343	6.86e-31	119
MS.gene047803.t1	AT5G23530	29.965	287	184	7	38	318	51	326	2.05e-30	117
MS.gene047803.t1	AT3G63010	31.746	252	152	8	74	318	103	341	7.99e-30	117
MS.gene047803.t1	AT5G62180	29.670	273	168	7	39	296	38	301	9.54e-27	107

Find 73 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAGAAAAGATTCATAATTTA+TGG	0.132943	4.4:-25909636	MS.gene047803:CDS
GGTTGGTGGGTGATTGGTTT+TGG	0.145456	4.4:+25910086	None:intergenic
CCTGTTCTTGTTTACATTCA+TGG	0.188053	4.4:-25910054	MS.gene047803:CDS
TGCTGAGATGTTATGTTCTT+TGG	0.197369	4.4:+25910122	None:intergenic
ACTTCACTTGCTAATGTTAT+TGG	0.227846	4.4:-25909970	MS.gene047803:CDS
TCGGGTCGGGAAGGAAAATT+TGG	0.248520	4.4:-25909749	MS.gene047803:CDS
CCACAGGTCATGAAGATTCT+TGG	0.249527	4.4:-25909906	MS.gene047803:CDS
CCCGGCTAATGATCCGGATT+TGG	0.252548	4.4:-25909566	MS.gene047803:CDS
TTGCACACCATTTAAGTATT+CGG	0.264356	4.4:-25909768	MS.gene047803:CDS
CCGGCTAATGATCCGGATTT+GGG	0.298106	4.4:-25909565	MS.gene047803:CDS
CCTGTGGGAACAGGGTGTTC+AGG	0.298801	4.4:+25909922	None:intergenic
TGCACACCATTTAAGTATTC+GGG	0.314345	4.4:-25909767	MS.gene047803:CDS
TTAAGGTAGTTATGGTAGTT+TGG	0.317173	4.4:+25910000	None:intergenic
CTGTGGGAACAGGGTGTTCA+GGG	0.338171	4.4:+25909923	None:intergenic
TCCCGACCCGAATACTTAAA+TGG	0.338222	4.4:+25909761	None:intergenic
GGATAGGGGTTGGTATTATA+AGG	0.344213	4.4:-25909488	MS.gene047803:CDS
ATTCTTGGCTTGCACTCAAA+TGG	0.347739	4.4:-25909891	MS.gene047803:CDS
GCTTCACATGTTGGTGGAAA+TGG	0.350595	4.4:-25909865	MS.gene047803:CDS
TCTTCATGACCTGTGGGAAC+AGG	0.379458	4.4:+25909913	None:intergenic
AGATTGCTTATTTGTGTTGC+TGG	0.381182	4.4:-25909526	MS.gene047803:CDS
TAACAGAGTTAAGGTAGTTA+TGG	0.382469	4.4:+25909992	None:intergenic
TTGGATGGTTTGAAACTTGA+AGG	0.392629	4.4:-25909730	MS.gene047803:CDS
GGTCGTGTTCAGAGACTTGC+AGG	0.405326	4.4:-25910210	MS.gene047803:CDS
TTATGGTAGTTTGGTGAGAA+AGG	0.405757	4.4:+25910009	None:intergenic
CCATGAATGTAAACAAGAAC+AGG	0.406581	4.4:+25910054	None:intergenic
TGATCCGGATTTGGGGAAGT+TGG	0.425803	4.4:-25909557	MS.gene047803:CDS
GATCCGGATTTGGGGAAGTT+GGG	0.428894	4.4:-25909556	MS.gene047803:CDS
CCCAAATCCGGATCATTAGC+CGG	0.438064	4.4:+25909565	None:intergenic
TTCTTGGCTTGCACTCAAAT+GGG	0.448935	4.4:-25909890	MS.gene047803:CDS
CAACCCAACTTCCCCAAATC+CGG	0.451858	4.4:+25909553	None:intergenic
GATTAACCCGGCTAATGATC+CGG	0.463961	4.4:-25909572	MS.gene047803:CDS
CATTAGCCGGGTTAATCAAC+GGG	0.468907	4.4:+25909578	None:intergenic
CTTTGATGAAGGAAACAACT+TGG	0.469524	4.4:+25909350	None:intergenic
ACCATTTAAGTATTCGGGTC+GGG	0.470145	4.4:-25909762	MS.gene047803:CDS
GTTCTTAAATTATACAAAAG+TGG	0.472355	4.4:-25910231	MS.gene047803:CDS
CCAAATCCGGATCATTAGCC+GGG	0.473736	4.4:+25909566	None:intergenic
CAAGTTGTTTCCTTCATCAA+AGG	0.484994	4.4:-25909349	MS.gene047803:CDS
CAAGTGAAGTAACAGAGTTA+AGG	0.493229	4.4:+25909983	None:intergenic
TTCATCGTCGATGGTGGAGG+AGG	0.507650	4.4:+25910275	None:intergenic
CGGGTTAATCAACGGGTCAT+CGG	0.507916	4.4:+25909585	None:intergenic
TACTTCATCGTCGATGGTGG+AGG	0.523560	4.4:+25910272	None:intergenic
AAATAGTTGGGGTGGTGTTG+TGG	0.524797	4.4:-25909452	MS.gene047803:CDS
GATTGCTTATTTGTGTTGCT+GGG	0.526972	4.4:-25909525	MS.gene047803:CDS
TTCATAGGAGGTGATAGTGC+TGG	0.528280	4.4:-25909799	MS.gene047803:CDS
TGGATGGTTTGAAACTTGAA+GGG	0.541623	4.4:-25909729	MS.gene047803:CDS
GTGGAAATGGCTCTGATGAA+TGG	0.542774	4.4:-25909852	MS.gene047803:CDS
TGTTCAGAGACTTGCAGGTA+CGG	0.552280	4.4:-25910205	MS.gene047803:CDS
TTTGCATGTCCAACTACGAA+TGG	0.552729	4.4:-25909610	MS.gene047803:CDS
GGCTACTTCATCGTCGATGG+TGG	0.554184	4.4:+25910269	None:intergenic
CTTCATGACCTGTGGGAACA+GGG	0.558600	4.4:+25909914	None:intergenic
TCATCGGATCCATTCGTAGT+TGG	0.564890	4.4:+25909601	None:intergenic
AACGGCTACTTCATCGTCGA+TGG	0.565230	4.4:+25910266	None:intergenic
CACCATTTAAGTATTCGGGT+CGG	0.566021	4.4:-25909763	MS.gene047803:CDS
GTCGGGAAGGAAAATTTGGA+TGG	0.567129	4.4:-25909745	MS.gene047803:CDS
CCTGAACACCCTGTTCCCAC+AGG	0.567848	4.4:-25909922	MS.gene047803:CDS
ACCGCAGCATTGTCACATGT+TGG	0.575233	4.4:+25909382	None:intergenic
AAATGGGTTGCTTCACATGT+TGG	0.579541	4.4:-25909874	MS.gene047803:CDS
TCATTAGCCGGGTTAATCAA+CGG	0.581749	4.4:+25909577	None:intergenic
AAGAACTGGGGTTAGATCAA+CGG	0.586206	4.4:+25910248	None:intergenic
CCAAGAATCTTCATGACCTG+TGG	0.586890	4.4:+25909906	None:intergenic
TGTGGGAACAGGGTGTTCAG+GGG	0.589713	4.4:+25909924	None:intergenic
TTTAAGTATTCGGGTCGGGA+AGG	0.597599	4.4:-25909758	MS.gene047803:CDS
AACATCTTTAGATTCAACGT+TGG	0.601272	4.4:+25910152	None:intergenic
CGATGACCCGTTGATTAACC+CGG	0.602163	4.4:-25909584	MS.gene047803:CDS
GGTGGAGGAGGTTGAATCCA+TGG	0.605959	4.4:+25910287	None:intergenic
CAAGAATCTTCATGACCTGT+GGG	0.606763	4.4:+25909907	None:intergenic
TGTGGAAGTGATTGAAACAG+AGG	0.609748	4.4:-25909434	MS.gene047803:CDS
TTTGTATAATTTAAGAACTG+GGG	0.616246	4.4:+25910236	None:intergenic
TGGGTTGCTTCACATGTTGG+TGG	0.616285	4.4:-25909871	MS.gene047803:CDS
CGGCTAATGATCCGGATTTG+GGG	0.633862	4.4:-25909564	MS.gene047803:CDS
ACCAACATGTGACAATGCTG+CGG	0.661762	4.4:-25909383	MS.gene047803:CDS
GTTCTTGTTTACATTCATGG+TGG	0.662192	4.4:-25910051	MS.gene047803:CDS
CATGAATGTAAACAAGAACA+GGG	0.675441	4.4:+25910055	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAGAAAAGATTCATAATTTA+TGG	-	chr4.4:25909991-25910010	MS.gene047803:CDS	15.0%
!!!	TTATATTCATCCTTATTTTT+GGG	-	chr4.4:25909926-25909945	MS.gene047803:CDS	15.0%
!!!	TTTATATTCATCCTTATTTT+TGG	-	chr4.4:25909925-25909944	MS.gene047803:CDS	15.0%
!!!	TTTTGTATAATTTAAGAACT+GGG	+	chr4.4:25909395-25909414	None:intergenic	15.0%
!!	GTTCTTAAATTATACAAAAG+TGG	-	chr4.4:25909396-25909415	MS.gene047803:CDS	20.0%
!!	TTTGTATAATTTAAGAACTG+GGG	+	chr4.4:25909394-25909413	None:intergenic	20.0%
!!!	CTTTTGTATAATTTAAGAAC+TGG	+	chr4.4:25909396-25909415	None:intergenic	20.0%
!!!	TATATTCATCCTTATTTTTG+GGG	-	chr4.4:25909927-25909946	MS.gene047803:CDS	20.0%
!	AATTGCTTGAGAAAAATAGT+TGG	-	chr4.4:25910162-25910181	MS.gene047803:CDS	25.0%
!	ATTGCTTGAGAAAAATAGTT+GGG	-	chr4.4:25910163-25910182	MS.gene047803:CDS	25.0%
!!!	GATTTTGAGAAAGTTTTCAT+AGG	-	chr4.4:25909813-25909832	MS.gene047803:CDS	25.0%
	AACATCTTTAGATTCAACGT+TGG	+	chr4.4:25909478-25909497	None:intergenic	30.0%
	CATGAATGTAAACAAGAACA+GGG	+	chr4.4:25909575-25909594	None:intergenic	30.0%
	TAACAGAGTTAAGGTAGTTA+TGG	+	chr4.4:25909638-25909657	None:intergenic	30.0%
	TTAAGGTAGTTATGGTAGTT+TGG	+	chr4.4:25909630-25909649	None:intergenic	30.0%
	TTGCACACCATTTAAGTATT+CGG	-	chr4.4:25909859-25909878	MS.gene047803:CDS	30.0%
	TTGCTTGAGAAAAATAGTTG+GGG	-	chr4.4:25910164-25910183	MS.gene047803:CDS	30.0%
!	ACTTCACTTGCTAATGTTAT+TGG	-	chr4.4:25909657-25909676	MS.gene047803:CDS	30.0%
!	TTTGAGAAAGTTTTCATAGG+AGG	-	chr4.4:25909816-25909835	MS.gene047803:CDS	30.0%
!!	CAAGATATTTTGAAGGATAG+GGG	-	chr4.4:25910125-25910144	MS.gene047803:CDS	30.0%
!!	GCAAGATATTTTGAAGGATA+GGG	-	chr4.4:25910124-25910143	MS.gene047803:CDS	30.0%
!!!	TTAGATTCAACGTTGGTTTT+AGG	+	chr4.4:25909471-25909490	None:intergenic	30.0%
	AGATTGCTTATTTGTGTTGC+TGG	-	chr4.4:25910101-25910120	MS.gene047803:CDS	35.0%
	CAAGTGAAGTAACAGAGTTA+AGG	+	chr4.4:25909647-25909666	None:intergenic	35.0%
	CCATGAATGTAAACAAGAAC+AGG	+	chr4.4:25909576-25909595	None:intergenic	35.0%
	CTTTGATGAAGGAAACAACT+TGG	+	chr4.4:25910280-25910299	None:intergenic	35.0%
	TGCACACCATTTAAGTATTC+GGG	-	chr4.4:25909860-25909879	MS.gene047803:CDS	35.0%
	TGCTGAGATGTTATGTTCTT+TGG	+	chr4.4:25909508-25909527	None:intergenic	35.0%
!	AAACAAGAACAGGGAGTTTT+TGG	+	chr4.4:25909566-25909585	None:intergenic	35.0%
!	AACAAGAACAGGGAGTTTTT+GGG	+	chr4.4:25909565-25909584	None:intergenic	35.0%
!	CAAGTTGTTTCCTTCATCAA+AGG	-	chr4.4:25910278-25910297	MS.gene047803:CDS	35.0%
!	CCTGTTCTTGTTTACATTCA+TGG	-	chr4.4:25909573-25909592	MS.gene047803:CDS	35.0%
!	GATTGCTTATTTGTGTTGCT+GGG	-	chr4.4:25910102-25910121	MS.gene047803:CDS	35.0%
!	GTTCTTGTTTACATTCATGG+TGG	-	chr4.4:25909576-25909595	MS.gene047803:CDS	35.0%
!	TGGATGGTTTGAAACTTGAA+GGG	-	chr4.4:25909898-25909917	MS.gene047803:CDS	35.0%
!	TTATGGTAGTTTGGTGAGAA+AGG	+	chr4.4:25909621-25909640	None:intergenic	35.0%
!	TTGGATGGTTTGAAACTTGA+AGG	-	chr4.4:25909897-25909916	MS.gene047803:CDS	35.0%
!!	ATATTTTGAAGGATAGGGGT+TGG	-	chr4.4:25910129-25910148	MS.gene047803:CDS	35.0%
!!	GGCAAGATATTTTGAAGGAT+AGG	-	chr4.4:25910123-25910142	MS.gene047803:CDS	35.0%
!!!	TTGGTTTTAGGATCAAGAGA+TGG	+	chr4.4:25909459-25909478	None:intergenic	35.0%
	AAGAACTGGGGTTAGATCAA+CGG	+	chr4.4:25909382-25909401	None:intergenic	40.0%
	ACCATTTAAGTATTCGGGTC+GGG	-	chr4.4:25909865-25909884	MS.gene047803:CDS	40.0%
	CAAGAATCTTCATGACCTGT+GGG	+	chr4.4:25909723-25909742	None:intergenic	40.0%
	CACCATTTAAGTATTCGGGT+CGG	-	chr4.4:25909864-25909883	MS.gene047803:CDS	40.0%
	CGATCTACACCCCAAAAATA+AGG	+	chr4.4:25909939-25909958	None:intergenic	40.0%
	CTTGAGAAAAATAGTTGGGG+TGG	-	chr4.4:25910167-25910186	MS.gene047803:CDS	40.0%
	TCATTAGCCGGGTTAATCAA+CGG	+	chr4.4:25910053-25910072	None:intergenic	40.0%
	TGTGGAAGTGATTGAAACAG+AGG	-	chr4.4:25910193-25910212	MS.gene047803:CDS	40.0%
	TTTGCATGTCCAACTACGAA+TGG	-	chr4.4:25910017-25910036	MS.gene047803:CDS	40.0%
!!	AAATGGGTTGCTTCACATGT+TGG	-	chr4.4:25909753-25909772	MS.gene047803:CDS	40.0%
!!	ATTCTTGGCTTGCACTCAAA+TGG	-	chr4.4:25909736-25909755	MS.gene047803:CDS	40.0%
!!	GGATAGGGGTTGGTATTATA+AGG	-	chr4.4:25910139-25910158	MS.gene047803:CDS	40.0%
!!	TGCTGGGCAAGATATTTTGA+AGG	-	chr4.4:25910118-25910137	MS.gene047803:CDS	40.0%
!!	TTCTTGGCTTGCACTCAAAT+GGG	-	chr4.4:25909737-25909756	MS.gene047803:CDS	40.0%
!!!	GTTTTAGGATCAAGAGATGG+AGG	+	chr4.4:25909456-25909475	None:intergenic	40.0%
!!!	TTTTGGGGTGTAGATCGAAT+TGG	-	chr4.4:25909942-25909961	MS.gene047803:CDS	40.0%
	ACCAACATGTGACAATGCTG+CGG	-	chr4.4:25910244-25910263	MS.gene047803:CDS	45.0%
	CATTAGCCGGGTTAATCAAC+GGG	+	chr4.4:25910052-25910071	None:intergenic	45.0%
	CCAAGAATCTTCATGACCTG+TGG	+	chr4.4:25909724-25909743	None:intergenic	45.0%
	CCACAGGTCATGAAGATTCT+TGG	-	chr4.4:25909721-25909740	MS.gene047803:CDS	45.0%
	GATTAACCCGGCTAATGATC+CGG	-	chr4.4:25910055-25910074	MS.gene047803:CDS	45.0%
	GTCGGGAAGGAAAATTTGGA+TGG	-	chr4.4:25909882-25909901	MS.gene047803:CDS	45.0%
	TCATCGGATCCATTCGTAGT+TGG	+	chr4.4:25910029-25910048	None:intergenic	45.0%
	TCCCGACCCGAATACTTAAA+TGG	+	chr4.4:25909869-25909888	None:intergenic	45.0%
	TGTTCAGAGACTTGCAGGTA+CGG	-	chr4.4:25909422-25909441	MS.gene047803:CDS	45.0%
	TTTAAGTATTCGGGTCGGGA+AGG	-	chr4.4:25909869-25909888	MS.gene047803:CDS	45.0%
!	AAATAGTTGGGGTGGTGTTG+TGG	-	chr4.4:25910175-25910194	MS.gene047803:CDS	45.0%
!	GCTTCACATGTTGGTGGAAA+TGG	-	chr4.4:25909762-25909781	MS.gene047803:CDS	45.0%
!	TTCATAGGAGGTGATAGTGC+TGG	-	chr4.4:25909828-25909847	MS.gene047803:CDS	45.0%
!!	GTGGAAATGGCTCTGATGAA+TGG	-	chr4.4:25909775-25909794	MS.gene047803:CDS	45.0%
!!!	AGAACAGGGAGTTTTTGGGT+TGG	+	chr4.4:25909561-25909580	None:intergenic	45.0%
!!!	GTTGGTGGGTGATTGGTTTT+GGG	+	chr4.4:25909543-25909562	None:intergenic	45.0%
!!!	TTTTTGGGTTGGTGGGTGAT+TGG	+	chr4.4:25909550-25909569	None:intergenic	45.0%
	AACGGCTACTTCATCGTCGA+TGG	+	chr4.4:25909364-25909383	None:intergenic	50.0%
	ACCGCAGCATTGTCACATGT+TGG	+	chr4.4:25910248-25910267	None:intergenic	50.0%
	CAACCCAACTTCCCCAAATC+CGG	+	chr4.4:25910077-25910096	None:intergenic	50.0%
	CCAAATCCGGATCATTAGCC+GGG	+	chr4.4:25910064-25910083	None:intergenic	50.0%
	CCCAAATCCGGATCATTAGC+CGG	+	chr4.4:25910065-25910084	None:intergenic	50.0%
	CCGGCTAATGATCCGGATTT+GGG	-	chr4.4:25910062-25910081	MS.gene047803:CDS	50.0%
	CGGCTAATGATCCGGATTTG+GGG	-	chr4.4:25910063-25910082	MS.gene047803:CDS	50.0%
	CGGGTTAATCAACGGGTCAT+CGG	+	chr4.4:25910045-25910064	None:intergenic	50.0%
	CTTCATGACCTGTGGGAACA+GGG	+	chr4.4:25909716-25909735	None:intergenic	50.0%
	GATCCGGATTTGGGGAAGTT+GGG	-	chr4.4:25910071-25910090	MS.gene047803:CDS	50.0%
	TCGGGTCGGGAAGGAAAATT+TGG	-	chr4.4:25909878-25909897	MS.gene047803:CDS	50.0%
	TCTTCATGACCTGTGGGAAC+AGG	+	chr4.4:25909717-25909736	None:intergenic	50.0%
	TGATCCGGATTTGGGGAAGT+TGG	-	chr4.4:25910070-25910089	MS.gene047803:CDS	50.0%
	TGGGTTGCTTCACATGTTGG+TGG	-	chr4.4:25909756-25909775	MS.gene047803:CDS	50.0%
!	CGATGACCCGTTGATTAACC+CGG	-	chr4.4:25910043-25910062	MS.gene047803:CDS	50.0%
!	TACTTCATCGTCGATGGTGG+AGG	+	chr4.4:25909358-25909377	None:intergenic	50.0%
!!!	ACAGGGAGTTTTTGGGTTGG+TGG	+	chr4.4:25909558-25909577	None:intergenic	50.0%
!!!	CAGGGAGTTTTTGGGTTGGT+GGG	+	chr4.4:25909557-25909576	None:intergenic	50.0%
!!!	GGTTGGTGGGTGATTGGTTT+TGG	+	chr4.4:25909544-25909563	None:intergenic	50.0%
	CCCGGCTAATGATCCGGATT+TGG	-	chr4.4:25910061-25910080	MS.gene047803:CDS	55.0%
	GGCTACTTCATCGTCGATGG+TGG	+	chr4.4:25909361-25909380	None:intergenic	55.0%
	GGTCGTGTTCAGAGACTTGC+AGG	-	chr4.4:25909417-25909436	MS.gene047803:CDS	55.0%
!	CTGTGGGAACAGGGTGTTCA+GGG	+	chr4.4:25909707-25909726	None:intergenic	55.0%
!	TGTGGGAACAGGGTGTTCAG+GGG	+	chr4.4:25909706-25909725	None:intergenic	55.0%
!!	TTCATCGTCGATGGTGGAGG+AGG	+	chr4.4:25909355-25909374	None:intergenic	55.0%
	CCTGAACACCCTGTTCCCAC+AGG	-	chr4.4:25909705-25909724	MS.gene047803:CDS	60.0%
!	CCTGTGGGAACAGGGTGTTC+AGG	+	chr4.4:25909708-25909727	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	25909342	25910307	25909342	ID=MS.gene047803
chr4.4	mRNA	25909342	25910307	25909342	ID=MS.gene047803.t1;Parent=MS.gene047803
chr4.4	exon	25909342	25910307	25909342	ID=MS.gene047803.t1.exon1;Parent=MS.gene047803.t1
chr4.4	CDS	25909342	25910307	25909342	ID=cds.MS.gene047803.t1;Parent=MS.gene047803.t1

Gene Sequence

>MS.gene047803

ATGGATTCAACCTCCTCCACCATCGACGATGAAGTAGCCGTTGATCTAACCCCAGTTCTTAAATTATACAAAAGTGGTCGTGTTCAGAGACTTGCAGGTACGGAAGTTCTTCCTCCATCTCTTGATCCTAAAACCAACGTTGAATCTAAAGATGTTATAATCTCCAAAGAACATAACATCTCAGCAAGACTTTTCATTCCCAAAACCAATCACCCACCAACCCAAAAACTCCCTGTTCTTGTTTACATTCATGGTGGTGCTTTCTGCATTGAAACACCTTTCTCACCAAACTACCATAACTACCTTAACTCTGTTACTTCACTTGCTAATGTTATTGGTGTCTCTGTTCATTACAGAAGAGCCCCTGAACACCCTGTTCCCACAGGTCATGAAGATTCTTGGCTTGCACTCAAATGGGTTGCTTCACATGTTGGTGGAAATGGCTCTGATGAATGGTTGAATCAATATGCAGATTTTGAGAAAGTTTTCATAGGAGGTGATAGTGCTGGTGCTAATATTGCACACCATTTAAGTATTCGGGTCGGGAAGGAAAATTTGGATGGTTTGAAACTTGAAGGGAGTTTTTATATTCATCCTTATTTTTGGGGTGTAGATCGAATTGGTTCAGAACTGAAACAAGCTGAATATATAGAAAAGATTCATAATTTATGGCGTTTTGCATGTCCAACTACGAATGGATCCGATGACCCGTTGATTAACCCGGCTAATGATCCGGATTTGGGGAAGTTGGGTTGTAAGAGATTGCTTATTTGTGTTGCTGGGCAAGATATTTTGAAGGATAGGGGTTGGTATTATAAGGAATTGCTTGAGAAAAATAGTTGGGGTGGTGTTGTGGAAGTGATTGAAACAGAGGATGAGAATCATGTGTTTCATATGTTCAAACCAACATGTGACAATGCTGCGGTTTTGCTTAACCAAGTTGTTTCCTTCATCAAAGGTGCTTGA

Protein sequence

>MS.gene047803.t1

MDSTSSTIDDEVAVDLTPVLKLYKSGRVQRLAGTEVLPPSLDPKTNVESKDVIISKEHNISARLFIPKTNHPPTQKLPVLVYIHGGAFCIETPFSPNYHNYLNSVTSLANVIGVSVHYRRAPEHPVPTGHEDSWLALKWVASHVGGNGSDEWLNQYADFEKVFIGGDSAGANIAHHLSIRVGKENLDGLKLEGSFYIHPYFWGVDRIGSELKQAEYIEKIHNLWRFACPTTNGSDDPLINPANDPDLGKLGCKRLLICVAGQDILKDRGWYYKELLEKNSWGGVVEVIETEDENHVFHMFKPTCDNAAVLLNQVVSFIKGA