AlfalfaGEDB | MS.gene051696

M. sativa cultivar XinJiangDaYe / MS.gene051696

KEGG: -
GO: GO:0003674 GO:0003824 GO:0016787
PFAM: PF07859.16

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051696.t1	XP_013448609.1	93.5	323	21	0	2	324	34	356	4.40E-179	637.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051696.t1	Q9SMN0	47.5	324	159	5	1	317	1	320	3.4e-87	323.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051696.t1	A0A072TZK9	93.5	323	21	0	2	324	34	356	3.2e-179	637.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene051696	MS.gene019397	PPI
MS.gene39628	MS.gene051696	PPI
MS.gene047803	MS.gene051696	PPI
MS.gene39627	MS.gene051696	PPI
MS.gene022960	MS.gene051696	PPI
MS.gene019395	MS.gene051696	PPI
MS.gene26527	MS.gene051696	PPI
MS.gene047804	MS.gene051696	PPI
MS.gene051696	MS.gene047802	PPI
MS.gene051696	MS.gene87832	PPI
MS.gene007061	MS.gene051696	PPI
MS.gene051696	MS.gene23057	PPI
MS.gene26526	MS.gene051696	PPI
MS.gene37504	MS.gene051696	PPI
MS.gene87834	MS.gene051696	PPI
MS.gene87835	MS.gene051696	PPI
MS.gene051696	MS.gene053480	PPI
MS.gene051696	MS.gene047804	PPI
MS.gene23641	MS.gene051696	PPI
MS.gene051696	MS.gene051907	PPI
MS.gene051696	MS.gene054628	PPI
MS.gene053470	MS.gene051696	PPI
MS.gene053479	MS.gene051696	PPI
MS.gene37505	MS.gene051696	PPI
MS.gene48487	MS.gene051696	PPI
MS.gene38730	MS.gene051696	PPI
MS.gene051696	MS.gene019398	PPI
MS.gene047802	MS.gene051696	PPI
MS.gene051696	MS.gene23639	PPI
MS.gene23638	MS.gene051696	PPI
MS.gene051696	MS.gene26528	PPI
MS.gene37503	MS.gene051696	PPI
MS.gene012997	MS.gene051696	PPI
MS.gene23692	MS.gene051696	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051696.t1	MTR_7g056207	93.498	323	21	0	2	324	34	356	0.0	630
MS.gene051696.t1	MTR_4g086510	86.164	318	44	0	1	318	1	318	0.0	574
MS.gene051696.t1	MTR_4g086480	62.037	324	116	3	1	320	1	321	7.94e-156	439
MS.gene051696.t1	MTR_4g086470	60.372	323	122	3	1	320	1	320	3.22e-141	402
MS.gene051696.t1	MTR_4g086540	43.987	316	154	3	2	317	12	304	9.59e-95	284
MS.gene051696.t1	MTR_3g101420	44.304	316	162	5	9	318	8	315	1.20e-93	281
MS.gene051696.t1	MTR_5g005850	43.865	326	167	8	3	317	8	328	5.05e-90	272
MS.gene051696.t1	MTR_1g105020	44.785	326	167	8	1	317	1	322	3.09e-89	270
MS.gene051696.t1	MTR_3g450680	41.463	328	176	8	2	318	10	332	8.66e-82	251
MS.gene051696.t1	MTR_5g005900	42.424	330	175	9	1	318	1	327	1.38e-76	238
MS.gene051696.t1	MTR_8g040860	40.625	320	177	8	7	318	15	329	1.23e-75	235
MS.gene051696.t1	MTR_5g005920	38.788	330	183	9	2	317	6	330	2.64e-74	232
MS.gene051696.t1	MTR_1g104930	41.304	322	176	7	4	318	8	323	1.59e-71	224
MS.gene051696.t1	MTR_7g051020	40.062	322	183	7	4	318	8	326	4.88e-68	216
MS.gene051696.t1	MTR_1g104933	40.252	318	175	7	7	318	9	317	4.49e-64	205
MS.gene051696.t1	MTR_1g111280	37.107	318	180	8	8	313	26	335	9.60e-58	190
MS.gene051696.t1	MTR_4g050140	34.259	324	192	7	5	317	2	315	1.78e-56	186
MS.gene051696.t1	MTR_7g406880	35.077	325	188	8	15	318	28	350	6.52e-55	182
MS.gene051696.t1	MTR_1g012430	36.278	317	185	9	8	318	3	308	7.56e-52	174
MS.gene051696.t1	MTR_7g107040	34.591	318	192	8	8	317	7	316	2.55e-48	165
MS.gene051696.t1	MTR_6g464120	34.868	304	178	9	21	313	29	323	4.57e-45	160
MS.gene051696.t1	MTR_3g012440	32.907	313	185	8	7	298	6	314	9.03e-44	153
MS.gene051696.t1	MTR_1g102160	34.875	281	158	7	16	279	19	291	1.39e-43	152
MS.gene051696.t1	MTR_8g035520	33.654	312	191	7	16	318	21	325	5.94e-41	145
MS.gene051696.t1	MTR_6g464510	33.007	306	182	10	24	315	31	327	9.32e-41	145
MS.gene051696.t1	MTR_8g035540	33.230	322	195	8	16	324	9	323	9.64e-40	142
MS.gene051696.t1	MTR_1g102170	33.955	268	156	7	21	276	43	301	1.15e-39	142
MS.gene051696.t1	MTR_6g065110	33.333	291	174	6	39	318	54	335	4.57e-39	141
MS.gene051696.t1	MTR_6g464320	31.419	296	180	9	35	315	39	326	3.50e-38	138
MS.gene051696.t1	MTR_6g464280	32.727	275	167	6	35	296	38	307	6.53e-38	137
MS.gene051696.t1	MTR_0007s0520	30.564	337	199	12	2	318	4	325	5.34e-36	132
MS.gene051696.t1	MTR_1g089310	33.225	307	172	11	33	321	53	344	7.49e-36	132
MS.gene051696.t1	MTR_6g065120	30.640	297	183	7	35	318	50	336	9.53e-36	132
MS.gene051696.t1	MTR_1g089310	33.225	307	172	11	33	321	69	360	9.63e-36	132
MS.gene051696.t1	MTR_7g093950	31.949	313	174	10	33	321	53	350	9.97e-36	132
MS.gene051696.t1	MTR_1g082210	31.046	306	182	8	33	322	53	345	1.37e-35	132
MS.gene051696.t1	MTR_6g065370	29.392	296	187	7	35	318	49	334	5.37e-34	127
MS.gene051696.t1	MTR_8g035500	31.496	254	162	5	35	279	33	283	2.88e-33	125
MS.gene051696.t1	MTR_6g065270	30.000	300	184	8	35	318	47	336	3.52e-33	125
MS.gene051696.t1	MTR_6g065400	29.730	296	186	7	35	318	49	334	5.24e-33	125
MS.gene051696.t1	MTR_6g065340	29.795	292	175	6	35	318	60	329	1.14e-32	124
MS.gene051696.t1	MTR_6g065430	30.556	288	185	6	35	317	50	327	1.75e-32	123

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051696.t1	AT3G48700	48.024	329	157	6	1	318	1	326	1.06e-104	310
MS.gene051696.t1	AT1G47480	46.875	320	158	5	1	318	1	310	4.53e-102	302
MS.gene051696.t1	AT2G03550	49.201	313	151	4	8	318	5	311	2.64e-101	300
MS.gene051696.t1	AT3G48690	47.385	325	160	5	1	318	1	321	6.79e-100	297
MS.gene051696.t1	AT1G19190	47.385	325	153	7	1	318	1	314	2.64e-97	290
MS.gene051696.t1	AT1G49660	46.497	314	165	3	7	317	4	317	3.44e-93	280
MS.gene051696.t1	AT1G49650	47.078	308	159	4	14	318	67	373	9.38e-90	273
MS.gene051696.t1	AT1G49640	45.455	308	158	6	14	317	12	313	3.75e-86	262
MS.gene051696.t1	AT1G68620	35.938	320	184	9	8	318	23	330	1.62e-54	181
MS.gene051696.t1	AT5G16080	36.066	305	178	8	8	303	28	324	6.30e-54	180
MS.gene051696.t1	AT5G06570	34.783	322	196	7	7	318	9	326	3.25e-44	154
MS.gene051696.t1	AT5G06570	34.783	322	196	7	7	318	9	326	3.25e-44	154
MS.gene051696.t1	AT5G06570	34.783	322	196	7	7	318	24	341	4.72e-44	154
MS.gene051696.t1	AT5G06570	34.783	322	196	7	7	318	24	341	4.72e-44	154
MS.gene051696.t1	AT2G45600	32.710	321	185	10	16	322	16	319	2.00e-40	144
MS.gene051696.t1	AT3G05120	32.026	306	178	8	33	321	53	345	6.83e-38	138
MS.gene051696.t1	AT5G27320	30.820	305	183	8	33	322	53	344	5.62e-37	135
MS.gene051696.t1	AT5G62180	32.886	298	173	10	35	317	38	323	1.18e-36	134
MS.gene051696.t1	AT3G63010	36.493	211	118	5	75	279	106	306	9.05e-34	127
MS.gene051696.t1	AT2G45610	31.126	302	181	11	33	318	34	324	1.96e-33	125
MS.gene051696.t1	AT5G23530	29.592	294	183	9	33	318	50	327	1.18e-30	118

Find 80 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GACAAAGCTTTATGAGATTT+TGG	0.142481	7.3:-49122824	None:intergenic
ATCAACAGTTACGTAGATTT+TGG	0.160744	7.3:+49122374	MS.gene051696:CDS
TCCGGGTAAGGATAAGAATT+TGG	0.212125	7.3:+49122640	MS.gene051696:CDS
GTTGGGTTGTAAGAATGTTT+TGG	0.280166	7.3:+49122667	MS.gene051696:CDS
GGATAAGAATTTGGGGAGGT+TGG	0.307714	7.3:+49122649	MS.gene051696:CDS
TTGGATTCTACGTTTGTTGT+TGG	0.322208	7.3:-49122038	None:intergenic
CCGGGTAAGGATAAGAATTT+GGG	0.325474	7.3:+49122641	MS.gene051696:CDS
TTCTTTGCAGGAGACAGTTC+TGG	0.335239	7.3:+49122404	MS.gene051696:CDS
GGATAGAGGTTGGTATTATA+AGG	0.336514	7.3:+49122718	MS.gene051696:CDS
GTTTGTTTGTCCAACAAGTT+CGG	0.342105	7.3:+49122595	MS.gene051696:CDS
TTTGTTTGTCCAACAAGTTC+GGG	0.342906	7.3:+49122596	MS.gene051696:CDS
GATAAGAATTTGGGGAGGTT+GGG	0.344863	7.3:+49122650	MS.gene051696:CDS
GCTATAGGAAGAGGATGTTC+TGG	0.353632	7.3:-49122281	None:intergenic
TAACCTTGAAGGGATTGTTT+TGG	0.366201	7.3:+49122484	MS.gene051696:CDS
GTTTGGAAATTCATCGTTGA+TGG	0.367756	7.3:-49122117	None:intergenic
ACTGCATGCAAGATTAATAA+AGG	0.374217	7.3:-49122867	None:intergenic
TATTAATCTTGCATGCAGTT+TGG	0.381108	7.3:+49122871	MS.gene051696:CDS
GCTTCTCATTTGCATGGAAA+TGG	0.403567	7.3:+49122338	MS.gene051696:CDS
AAATTCATCGTTGATGGGTA+TGG	0.404848	7.3:-49122111	None:intergenic
CATGAATCTTCGTATGCTAT+AGG	0.408799	7.3:-49122296	None:intergenic
CGATGACCCGTTATTGAATC+CGG	0.417641	7.3:+49122622	MS.gene051696:CDS
TTATCATTGGTGAGAGATCA+AGG	0.418548	7.3:-49121950	None:intergenic
CTATAGCATACGAAGATTCA+TGG	0.419285	7.3:+49122297	MS.gene051696:CDS
ACAAAAGATAAATATTGTTC+AGG	0.420042	7.3:-49122557	None:intergenic
CCCAAATTCTTATCCTTACC+CGG	0.420067	7.3:-49122641	None:intergenic
ATTCATGGACTTCCCTCAAA+TGG	0.436400	7.3:+49122312	MS.gene051696:CDS
TTTGTTGTTGGATCAAAAGA+TGG	0.442349	7.3:-49122026	None:intergenic
TCCTTACCCGGATTCAATAA+CGG	0.444048	7.3:-49122629	None:intergenic
CCTTACCCGGATTCAATAAC+GGG	0.445272	7.3:-49122628	None:intergenic
TTGCTTGAGAAAAGTGGTTA+TGG	0.445976	7.3:+49122743	MS.gene051696:CDS
TTGAGATAATTGTGGTATGT+TGG	0.456230	7.3:-49122203	None:intergenic
GGGTATGGGAATGAAGATTC+TGG	0.461502	7.3:-49122096	None:intergenic
AATGATTTAATGAAGGATAG+AGG	0.462878	7.3:+49122704	MS.gene051696:CDS
CCTCTCCTTGTTTACTTCCA+CGG	0.464719	7.3:+49122149	MS.gene051696:CDS
CTATAGGAAGAGGATGTTCT+GGG	0.466651	7.3:-49122280	None:intergenic
GAACCAAAACAATCCCTTCA+AGG	0.467598	7.3:-49122487	None:intergenic
GTTGGAACTGAAGGGCTTCA+AGG	0.471170	7.3:+49122458	MS.gene051696:CDS
TGCAAACATTGCACATCAAA+TGG	0.473268	7.3:+49122427	MS.gene051696:CDS
TTCGTCTGAGCTTGAATCCA+TGG	0.477080	7.3:-49121922	None:intergenic
CTTCAAGGGATTAACCTTGA+AGG	0.479794	7.3:+49122473	MS.gene051696:CDS
AATGAGAAGCGATCCATTTG+AGG	0.483490	7.3:-49122325	None:intergenic
AAGGAGTTGCTTGAGAAAAG+TGG	0.492040	7.3:+49122737	MS.gene051696:CDS
CTTGTTTACTTCCACGGTGG+TGG	0.494455	7.3:+49122155	MS.gene051696:CDS
TCATCGGATCCCGAACTTGT+TGG	0.500915	7.3:-49122605	None:intergenic
CCCGTTATTGAATCCGGGTA+AGG	0.504978	7.3:+49122628	MS.gene051696:CDS
TTGTGGTATGTTGGTGAGAA+AGG	0.506147	7.3:-49122194	None:intergenic
TTCAAGGGATTAACCTTGAA+GGG	0.506683	7.3:+49122474	MS.gene051696:CDS
GCTATTCGTGTTGGAACTGA+AGG	0.510323	7.3:+49122449	MS.gene051696:CDS
ATTTAATGAAGGATAGAGGT+TGG	0.510939	7.3:+49122708	MS.gene051696:CDS
TCTTCGTATGCTATAGGAAG+AGG	0.511339	7.3:-49122290	None:intergenic
AATTCATCGTTGATGGGTAT+GGG	0.527547	7.3:-49122110	None:intergenic
TTGGAACTGAAGGGCTTCAA+GGG	0.535779	7.3:+49122459	MS.gene051696:CDS
TTTGGAAATTCATCGTTGAT+GGG	0.536977	7.3:-49122116	None:intergenic
CATCAAATGGCTATTCGTGT+TGG	0.537039	7.3:+49122440	MS.gene051696:CDS
ATGAGAAGCGATCCATTTGA+GGG	0.547493	7.3:-49122324	None:intergenic
ATGGAAATGGTTGTGATGAA+TGG	0.552637	7.3:+49122351	MS.gene051696:CDS
GTTGATGTGATTGAGACAAA+AGG	0.552670	7.3:+49122773	MS.gene051696:CDS
TGCTGAGAATGATTTAATGA+AGG	0.559812	7.3:+49122697	MS.gene051696:CDS
TGGATCGCTTCTCATTTGCA+TGG	0.563899	7.3:+49122332	MS.gene051696:CDS
TACATTAGCTTGAGAAACAA+TGG	0.567689	7.3:-49122228	None:intergenic
CGGATTCAATAACGGGTCAT+CGG	0.578183	7.3:-49122621	None:intergenic
GATGACCCGTTATTGAATCC+GGG	0.583489	7.3:+49122623	MS.gene051696:CDS
CTCCTTGTTTACTTCCACGG+TGG	0.586065	7.3:+49122152	MS.gene051696:CDS
GGTCACATAGAAAGACTCTC+AGG	0.595927	7.3:+49121987	MS.gene051696:CDS
TCGTCTGAGCTTGAATCCAT+GGG	0.599476	7.3:-49121921	None:intergenic
CTATTCGTGTTGGAACTGAA+GGG	0.601762	7.3:+49122450	MS.gene051696:CDS
CACCACCGTGGAAGTAAACA+AGG	0.602557	7.3:-49122154	None:intergenic
ATGATAAAAGTCTACAAAGA+CGG	0.607569	7.3:+49121966	MS.gene051696:CDS
CAATGGTGTTGAGATAATTG+TGG	0.613571	7.3:-49122211	None:intergenic
GTTGTTGGATCAAAAGATGG+AGG	0.615289	7.3:-49122023	None:intergenic
AAAAGATGGAGGTACAATGT+CGG	0.623683	7.3:-49122012	None:intergenic
CTTGAGAAAAGTGGTTATGG+TGG	0.628747	7.3:+49122746	MS.gene051696:CDS
CCGTGGAAGTAAACAAGGAG+AGG	0.629043	7.3:-49122149	None:intergenic
TGTGGAAAGAGTTGGATCTG+AGG	0.629593	7.3:+49122526	MS.gene051696:CDS
CGTGGAAGTAAACAAGGAGA+GGG	0.633922	7.3:-49122148	None:intergenic
GTGATTGAGACAAAAGGTGA+AGG	0.667699	7.3:+49122779	MS.gene051696:CDS
TATAGGAAGAGGATGTTCTG+GGG	0.732130	7.3:-49122279	None:intergenic
GTAAGGATAAGAATTTGGGG+AGG	0.741992	7.3:+49122645	MS.gene051696:CDS
CGGGTAAGGATAAGAATTTG+GGG	0.748700	7.3:+49122642	MS.gene051696:CDS
CTACGCAGAAACCACCACCG+TGG	0.793795	7.3:-49122166	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ACAAAAGATAAATATTGTTC+AGG	-	chr7.3:49122560-49122579	None:intergenic	20.0%
!!!	TATCTTTTGTGGATAATTTA+TGG	+	chr7.3:49122570-49122589	MS.gene051696:CDS	20.0%
!!!	TGAACAATATTTATCTTTTG+TGG	+	chr7.3:49122559-49122578	MS.gene051696:CDS	20.0%
!	AATGATTTAATGAAGGATAG+AGG	+	chr7.3:49122704-49122723	MS.gene051696:CDS	25.0%
!	ATGATAAAAGTCTACAAAGA+CGG	+	chr7.3:49121966-49121985	MS.gene051696:CDS	25.0%
!!	TCTTTGTAGACTTTTATCAT+TGG	-	chr7.3:49121966-49121985	None:intergenic	25.0%
	ACTGCATGCAAGATTAATAA+AGG	-	chr7.3:49122870-49122889	None:intergenic	30.0%
	ATTTAATGAAGGATAGAGGT+TGG	+	chr7.3:49122708-49122727	MS.gene051696:CDS	30.0%
	TATTAATCTTGCATGCAGTT+TGG	+	chr7.3:49122871-49122890	MS.gene051696:CDS	30.0%
	TGCTGAGAATGATTTAATGA+AGG	+	chr7.3:49122697-49122716	MS.gene051696:CDS	30.0%
	TTGAGATAATTGTGGTATGT+TGG	-	chr7.3:49122206-49122225	None:intergenic	30.0%
	TTTGGAAATTCATCGTTGAT+GGG	-	chr7.3:49122119-49122138	None:intergenic	30.0%
!	ATCAACAGTTACGTAGATTT+TGG	+	chr7.3:49122374-49122393	MS.gene051696:CDS	30.0%
!	CTTTTGTGGATAATTTATGG+CGG	+	chr7.3:49122573-49122592	MS.gene051696:CDS	30.0%
!	TACATTAGCTTGAGAAACAA+TGG	-	chr7.3:49122231-49122250	None:intergenic	30.0%
!	TTTGGAAAAGTTTTCTTTGC+AGG	+	chr7.3:49122392-49122411	MS.gene051696:CDS	30.0%
!!	GACAAAGCTTTATGAGATTT+TGG	-	chr7.3:49122827-49122846	None:intergenic	30.0%
!!	TTTGGTTCATGCATTCTTTT+GGG	+	chr7.3:49122502-49122521	MS.gene051696:CDS	30.0%
!!	TTTGTTGTTGGATCAAAAGA+TGG	-	chr7.3:49122029-49122048	None:intergenic	30.0%
!!!	TTTTGAGATGAGAATGTCTT+TGG	-	chr7.3:49122060-49122079	None:intergenic	30.0%
!!!	TTTTGGTTCATGCATTCTTT+TGG	+	chr7.3:49122501-49122520	MS.gene051696:CDS	30.0%
	ATGGAAATGGTTGTGATGAA+TGG	+	chr7.3:49122351-49122370	MS.gene051696:CDS	35.0%
	CATGAATCTTCGTATGCTAT+AGG	-	chr7.3:49122299-49122318	None:intergenic	35.0%
	CTATAGCATACGAAGATTCA+TGG	+	chr7.3:49122297-49122316	MS.gene051696:CDS	35.0%
	GTTGATGTGATTGAGACAAA+AGG	+	chr7.3:49122773-49122792	MS.gene051696:CDS	35.0%
	GTTTGGAAATTCATCGTTGA+TGG	-	chr7.3:49122120-49122139	None:intergenic	35.0%
	GTTTGTTTGTCCAACAAGTT+CGG	+	chr7.3:49122595-49122614	MS.gene051696:CDS	35.0%
	TGCAAACATTGCACATCAAA+TGG	+	chr7.3:49122427-49122446	MS.gene051696:CDS	35.0%
	TTATCATTGGTGAGAGATCA+AGG	-	chr7.3:49121953-49121972	None:intergenic	35.0%
	TTCAAGGGATTAACCTTGAA+GGG	+	chr7.3:49122474-49122493	MS.gene051696:CDS	35.0%
	TTGCTTGAGAAAAGTGGTTA+TGG	+	chr7.3:49122743-49122762	MS.gene051696:CDS	35.0%
	TTTGTTTGTCCAACAAGTTC+GGG	+	chr7.3:49122596-49122615	MS.gene051696:CDS	35.0%
!	AAAAGATGGAGGTACAATGT+CGG	-	chr7.3:49122015-49122034	None:intergenic	35.0%
!	AAATTCATCGTTGATGGGTA+TGG	-	chr7.3:49122114-49122133	None:intergenic	35.0%
!	AATTCATCGTTGATGGGTAT+GGG	-	chr7.3:49122113-49122132	None:intergenic	35.0%
!	CAATGGTGTTGAGATAATTG+TGG	-	chr7.3:49122214-49122233	None:intergenic	35.0%
!	TAACCTTGAAGGGATTGTTT+TGG	+	chr7.3:49122484-49122503	MS.gene051696:CDS	35.0%
!	TTGGTTCATGCATTCTTTTG+GGG	+	chr7.3:49122503-49122522	MS.gene051696:CDS	35.0%
!!	GGATAGAGGTTGGTATTATA+AGG	+	chr7.3:49122718-49122737	MS.gene051696:CDS	35.0%
!!	GTTGGGTTGTAAGAATGTTT+TGG	+	chr7.3:49122667-49122686	MS.gene051696:CDS	35.0%
!!	TTGGATTCTACGTTTGTTGT+TGG	-	chr7.3:49122041-49122060	None:intergenic	35.0%
	AAGGAGTTGCTTGAGAAAAG+TGG	+	chr7.3:49122737-49122756	MS.gene051696:CDS	40.0%
	AATGAGAAGCGATCCATTTG+AGG	-	chr7.3:49122328-49122347	None:intergenic	40.0%
	ATGAGAAGCGATCCATTTGA+GGG	-	chr7.3:49122327-49122346	None:intergenic	40.0%
	ATTCATGGACTTCCCTCAAA+TGG	+	chr7.3:49122312-49122331	MS.gene051696:CDS	40.0%
	CATCAAATGGCTATTCGTGT+TGG	+	chr7.3:49122440-49122459	MS.gene051696:CDS	40.0%
	CCCAAATTCTTATCCTTACC+CGG	-	chr7.3:49122644-49122663	None:intergenic	40.0%
	CCGGGTAAGGATAAGAATTT+GGG	+	chr7.3:49122641-49122660	MS.gene051696:CDS	40.0%
	CGGGTAAGGATAAGAATTTG+GGG	+	chr7.3:49122642-49122661	MS.gene051696:CDS	40.0%
	CTATAGGAAGAGGATGTTCT+GGG	-	chr7.3:49122283-49122302	None:intergenic	40.0%
	CTATTCGTGTTGGAACTGAA+GGG	+	chr7.3:49122450-49122469	MS.gene051696:CDS	40.0%
	CTTCAAGGGATTAACCTTGA+AGG	+	chr7.3:49122473-49122492	MS.gene051696:CDS	40.0%
	CTTGAGAAAAGTGGTTATGG+TGG	+	chr7.3:49122746-49122765	MS.gene051696:CDS	40.0%
	GAACCAAAACAATCCCTTCA+AGG	-	chr7.3:49122490-49122509	None:intergenic	40.0%
	GATAAGAATTTGGGGAGGTT+GGG	+	chr7.3:49122650-49122669	MS.gene051696:CDS	40.0%
	GCTTCTCATTTGCATGGAAA+TGG	+	chr7.3:49122338-49122357	MS.gene051696:CDS	40.0%
	GTAAGGATAAGAATTTGGGG+AGG	+	chr7.3:49122645-49122664	MS.gene051696:CDS	40.0%
	GTGATTGAGACAAAAGGTGA+AGG	+	chr7.3:49122779-49122798	MS.gene051696:CDS	40.0%
	GTTGTTGGATCAAAAGATGG+AGG	-	chr7.3:49122026-49122045	None:intergenic	40.0%
	TATAGGAAGAGGATGTTCTG+GGG	-	chr7.3:49122282-49122301	None:intergenic	40.0%
	TCCGGGTAAGGATAAGAATT+TGG	+	chr7.3:49122640-49122659	MS.gene051696:CDS	40.0%
	TCCTTACCCGGATTCAATAA+CGG	-	chr7.3:49122632-49122651	None:intergenic	40.0%
	TCTTCGTATGCTATAGGAAG+AGG	-	chr7.3:49122293-49122312	None:intergenic	40.0%
!	AAACAAGGAGAGGGAGTTTT+TGG	-	chr7.3:49122142-49122161	None:intergenic	40.0%
!	TTGTGGTATGTTGGTGAGAA+AGG	-	chr7.3:49122197-49122216	None:intergenic	40.0%
	CCTTACCCGGATTCAATAAC+GGG	-	chr7.3:49122631-49122650	None:intergenic	45.0%
	CGATGACCCGTTATTGAATC+CGG	+	chr7.3:49122622-49122641	MS.gene051696:CDS	45.0%
	CGTGGAAGTAAACAAGGAGA+GGG	-	chr7.3:49122151-49122170	None:intergenic	45.0%
	GATGACCCGTTATTGAATCC+GGG	+	chr7.3:49122623-49122642	MS.gene051696:CDS	45.0%
	GCTATAGGAAGAGGATGTTC+TGG	-	chr7.3:49122284-49122303	None:intergenic	45.0%
	GCTATTCGTGTTGGAACTGA+AGG	+	chr7.3:49122449-49122468	MS.gene051696:CDS	45.0%
	GGATAAGAATTTGGGGAGGT+TGG	+	chr7.3:49122649-49122668	MS.gene051696:CDS	45.0%
	GGGTATGGGAATGAAGATTC+TGG	-	chr7.3:49122099-49122118	None:intergenic	45.0%
	GGTCACATAGAAAGACTCTC+AGG	+	chr7.3:49121987-49122006	MS.gene051696:CDS	45.0%
	TGGATCGCTTCTCATTTGCA+TGG	+	chr7.3:49122332-49122351	MS.gene051696:CDS	45.0%
	TGTGGAAAGAGTTGGATCTG+AGG	+	chr7.3:49122526-49122545	MS.gene051696:CDS	45.0%
	TTCTTTGCAGGAGACAGTTC+TGG	+	chr7.3:49122404-49122423	MS.gene051696:CDS	45.0%
	TTGGAACTGAAGGGCTTCAA+GGG	+	chr7.3:49122459-49122478	MS.gene051696:CDS	45.0%
!	CCTCTCCTTGTTTACTTCCA+CGG	+	chr7.3:49122149-49122168	MS.gene051696:CDS	45.0%
!!	CGGATTCAATAACGGGTCAT+CGG	-	chr7.3:49122624-49122643	None:intergenic	45.0%
!!!	AGGAGAGGGAGTTTTTGGTT+TGG	-	chr7.3:49122137-49122156	None:intergenic	45.0%
!!!	TCATGCATTCTTTTGGGGTG+TGG	+	chr7.3:49122508-49122527	MS.gene051696:CDS	45.0%
!!!	TTTTGGGGTGTGGAAAGAGT+TGG	+	chr7.3:49122518-49122537	MS.gene051696:CDS	45.0%
	CACCACCGTGGAAGTAAACA+AGG	-	chr7.3:49122157-49122176	None:intergenic	50.0%
	CCCGTTATTGAATCCGGGTA+AGG	+	chr7.3:49122628-49122647	MS.gene051696:CDS	50.0%
	CCGTGGAAGTAAACAAGGAG+AGG	-	chr7.3:49122152-49122171	None:intergenic	50.0%
	CTTGTTTACTTCCACGGTGG+TGG	+	chr7.3:49122155-49122174	MS.gene051696:CDS	50.0%
	GTTGGAACTGAAGGGCTTCA+AGG	+	chr7.3:49122458-49122477	MS.gene051696:CDS	50.0%
	TCATCGGATCCCGAACTTGT+TGG	-	chr7.3:49122608-49122627	None:intergenic	50.0%
!	CTCCTTGTTTACTTCCACGG+TGG	+	chr7.3:49122152-49122171	MS.gene051696:CDS	50.0%
	CTACGCAGAAACCACCACCG+TGG	-	chr7.3:49122169-49122188	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.3	gene	49121924	49122898	49121924	ID=MS.gene051696
chr7.3	mRNA	49121924	49122898	49121924	ID=MS.gene051696.t1;Parent=MS.gene051696
chr7.3	exon	49121924	49122898	49121924	ID=MS.gene051696.t1.exon1;Parent=MS.gene051696.t1
chr7.3	CDS	49121924	49122898	49121924	ID=cds.MS.gene051696.t1;Parent=MS.gene051696.t1

Gene Sequence

>MS.gene051696

ATGGATTCAAGCTCAGACGAAGTAGTCCTTGATCTCTCACCAATGATAAAAGTCTACAAAGACGGTCACATAGAAAGACTCTCAGGATCCGACATTGTACCTCCATCTTTTGATCCAACAACAAACGTAGAATCCAAAGACATTCTCATCTCAAAAGACAAAAACATATCAGCCAGAATCTTCATTCCCATACCCATCAACGATGAATTTCCAAACCAAAAACTCCCTCTCCTTGTTTACTTCCACGGTGGTGGTTTCTGCGTAGAAACACCTTTCTCACCAACATACCACAATTATCTCAACACCATTGTTTCTCAAGCTAATGTAATCGCTGTTTCAGTTGATTACAGAAGAGCCCCAGAACATCCTCTTCCTATAGCATACGAAGATTCATGGACTTCCCTCAAATGGATCGCTTCTCATTTGCATGGAAATGGTTGTGATGAATGGATCAACAGTTACGTAGATTTTGGAAAAGTTTTCTTTGCAGGAGACAGTTCTGGTGCAAACATTGCACATCAAATGGCTATTCGTGTTGGAACTGAAGGGCTTCAAGGGATTAACCTTGAAGGGATTGTTTTGGTTCATGCATTCTTTTGGGGTGTGGAAAGAGTTGGATCTGAGGCTGAGAAACCTGAACAATATTTATCTTTTGTGGATAATTTATGGCGGTTTGTTTGTCCAACAAGTTCGGGATCCGATGACCCGTTATTGAATCCGGGTAAGGATAAGAATTTGGGGAGGTTGGGTTGTAAGAATGTTTTGGTTTGTGTTGCTGAGAATGATTTAATGAAGGATAGAGGTTGGTATTATAAGGAGTTGCTTGAGAAAAGTGGTTATGGTGGTATTGTTGATGTGATTGAGACAAAAGGTGAAGGACATGTTTTTCATCTCTTTAATCCAAAATCTCATAAAGCTTTGTCTTTGCTTAAGCAAATTGTTTCCTTTATTAATCTTGCATGCAGTTTGGCATAG

Protein sequence

>MS.gene051696.t1

MDSSSDEVVLDLSPMIKVYKDGHIERLSGSDIVPPSFDPTTNVESKDILISKDKNISARIFIPIPINDEFPNQKLPLLVYFHGGGFCVETPFSPTYHNYLNTIVSQANVIAVSVDYRRAPEHPLPIAYEDSWTSLKWIASHLHGNGCDEWINSYVDFGKVFFAGDSSGANIAHQMAIRVGTEGLQGINLEGIVLVHAFFWGVERVGSEAEKPEQYLSFVDNLWRFVCPTSSGSDDPLLNPGKDKNLGRLGCKNVLVCVAENDLMKDRGWYYKELLEKSGYGGIVDVIETKGEGHVFHLFNPKSHKALSLLKQIVSFINLACSLA