Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26526.t1 | XP_003608006.1 | 95.3 | 320 | 15 | 0 | 1 | 320 | 1 | 320 | 1.60E-181 | 645.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26526.t1 | Q9SMN0 | 48.0 | 321 | 158 | 6 | 7 | 318 | 1 | 321 | 1.5e-87 | 324.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26526.t1 | G7JME9 | 95.3 | 320 | 15 | 0 | 1 | 320 | 1 | 320 | 1.2e-181 | 645.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene26526 | 0.828829 | 7.23E-55 | -1.69E-46 |
| MS.gene049171 | MS.gene26526 | 0.893785 | 4.55E-75 | -1.69E-46 |
| MS.gene049217 | MS.gene26526 | 0.845032 | 5.23E-59 | -1.69E-46 |
| MS.gene049222 | MS.gene26526 | 0.853916 | 1.74E-61 | -1.69E-46 |
| MS.gene049232 | MS.gene26526 | 0.833866 | 4.17E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene26526 | 0.883808 | 3.28E-71 | -1.69E-46 |
| MS.gene049320 | MS.gene26526 | 0.882923 | 6.93E-71 | -1.69E-46 |
| MS.gene049373 | MS.gene26526 | 0.816547 | 5.23E-52 | -1.69E-46 |
| MS.gene04938 | MS.gene26526 | 0.803273 | 3.77E-49 | -1.69E-46 |
| MS.gene04939 | MS.gene26526 | 0.848878 | 4.63E-60 | -1.69E-46 |
| MS.gene049609 | MS.gene26526 | 0.865836 | 4.42E-65 | -1.69E-46 |
| MS.gene049627 | MS.gene26526 | 0.810278 | 1.25E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene26526 | 0.874321 | 7.40E-68 | -1.69E-46 |
| MS.gene049805 | MS.gene26526 | 0.811309 | 7.47E-51 | -1.69E-46 |
| MS.gene049865 | MS.gene26526 | 0.839884 | 1.21E-57 | -1.69E-46 |
| MS.gene05010 | MS.gene26526 | 0.867468 | 1.34E-65 | -1.69E-46 |
| MS.gene050163 | MS.gene26526 | 0.843786 | 1.13E-58 | -1.69E-46 |
| MS.gene050165 | MS.gene26526 | 0.834773 | 2.47E-56 | -1.69E-46 |
| MS.gene050170 | MS.gene26526 | 0.90393 | 2.08E-79 | -1.69E-46 |
| MS.gene050323 | MS.gene26526 | 0.878203 | 3.40E-69 | -1.69E-46 |
| MS.gene050333 | MS.gene26526 | 0.805943 | 1.05E-49 | -1.69E-46 |
| MS.gene050444 | MS.gene26526 | 0.822831 | 1.92E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene26526 | 0.85756 | 1.50E-62 | -1.69E-46 |
| MS.gene050504 | MS.gene26526 | 0.892293 | 1.81E-74 | -1.69E-46 |
| MS.gene050518 | MS.gene26526 | 0.856076 | 4.11E-62 | -1.69E-46 |
| MS.gene050538 | MS.gene26526 | 0.813931 | 1.99E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene26526 | 0.904539 | 1.10E-79 | -1.69E-46 |
| MS.gene050593 | MS.gene26526 | 0.800147 | 1.65E-48 | -1.69E-46 |
| MS.gene050612 | MS.gene26526 | 0.878364 | 2.98E-69 | -1.69E-46 |
| MS.gene050675 | MS.gene26526 | 0.871817 | 5.12E-67 | -1.69E-46 |
| MS.gene050699 | MS.gene26526 | 0.905744 | 3.11E-80 | -1.69E-46 |
| MS.gene050747 | MS.gene26526 | 0.843109 | 1.71E-58 | -1.69E-46 |
| MS.gene050772 | MS.gene26526 | 0.857883 | 1.20E-62 | -1.69E-46 |
| MS.gene05080 | MS.gene26526 | 0.850775 | 1.37E-60 | -1.69E-46 |
| MS.gene05081 | MS.gene26526 | 0.856573 | 2.94E-62 | -1.69E-46 |
| MS.gene050868 | MS.gene26526 | 0.85734 | 1.74E-62 | -1.69E-46 |
| MS.gene050871 | MS.gene26526 | 0.858108 | 1.03E-62 | -1.69E-46 |
| MS.gene050876 | MS.gene26526 | 0.819439 | 1.16E-52 | -1.69E-46 |
| MS.gene050904 | MS.gene26526 | 0.847709 | 9.74E-60 | -1.69E-46 |
| MS.gene050950 | MS.gene26526 | 0.841983 | 3.41E-58 | -1.69E-46 |
| MS.gene050986 | MS.gene26526 | 0.899167 | 2.59E-77 | -1.69E-46 |
| MS.gene05100 | MS.gene26526 | 0.803182 | 3.94E-49 | -1.69E-46 |
| MS.gene051268 | MS.gene26526 | 0.821893 | 3.17E-53 | -1.69E-46 |
| MS.gene051317 | MS.gene26526 | 0.900324 | 8.21E-78 | -1.69E-46 |
| MS.gene051336 | MS.gene26526 | 0.818837 | 1.59E-52 | -1.69E-46 |
| MS.gene051551 | MS.gene26526 | 0.866636 | 2.47E-65 | -1.69E-46 |
| MS.gene051810 | MS.gene26526 | 0.836841 | 7.39E-57 | -1.69E-46 |
| MS.gene051838 | MS.gene26526 | 0.8727 | 2.60E-67 | -1.69E-46 |
| MS.gene051941 | MS.gene26526 | 0.820872 | 5.45E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene26526 | 0.873558 | 1.34E-67 | -1.69E-46 |
| MS.gene052318 | MS.gene26526 | 0.813557 | 2.41E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene26526 | 0.878498 | 2.68E-69 | -1.69E-46 |
| MS.gene052486 | MS.gene26526 | 0.884641 | 1.61E-71 | -1.69E-46 |
| MS.gene052501 | MS.gene26526 | 0.845808 | 3.22E-59 | -1.69E-46 |
| MS.gene052503 | MS.gene26526 | 0.90833 | 1.92E-81 | -1.69E-46 |
| MS.gene052505 | MS.gene26526 | 0.84526 | 4.54E-59 | -1.69E-46 |
| MS.gene052506 | MS.gene26526 | 0.827321 | 1.67E-54 | -1.69E-46 |
| MS.gene052615 | MS.gene26526 | 0.874521 | 6.33E-68 | -1.69E-46 |
| MS.gene052822 | MS.gene26526 | 0.82523 | 5.25E-54 | -1.69E-46 |
| MS.gene052823 | MS.gene26526 | 0.910591 | 1.58E-82 | -1.69E-46 |
| MS.gene052825 | MS.gene26526 | 0.902539 | 8.75E-79 | -1.69E-46 |
| MS.gene052870 | MS.gene26526 | 0.802776 | 4.78E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene26526 | 0.829708 | 4.42E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene26526 | 0.848567 | 5.65E-60 | -1.69E-46 |
| MS.gene052986 | MS.gene26526 | 0.808863 | 2.51E-50 | -1.69E-46 |
| MS.gene052987 | MS.gene26526 | 0.809496 | 1.84E-50 | -1.69E-46 |
| MS.gene053117 | MS.gene26526 | 0.829777 | 4.26E-55 | -1.69E-46 |
| MS.gene053203 | MS.gene26526 | 0.878431 | 2.82E-69 | -1.69E-46 |
| MS.gene053207 | MS.gene26526 | 0.842538 | 2.43E-58 | -1.69E-46 |
| MS.gene053213 | MS.gene26526 | 0.866086 | 3.69E-65 | -1.69E-46 |
| MS.gene053286 | MS.gene26526 | 0.868142 | 8.14E-66 | -1.69E-46 |
| MS.gene053436 | MS.gene26526 | 0.837473 | 5.09E-57 | -1.69E-46 |
| MS.gene053479 | MS.gene26526 | 0.8605 | 1.98E-63 | -1.69E-46 |
| MS.gene053480 | MS.gene26526 | 0.954478 | 2.70E-112 | -1.69E-46 |
| MS.gene053549 | MS.gene26526 | -0.818711 | 1.70E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene26526 | 0.856241 | 3.67E-62 | -1.69E-46 |
| MS.gene053626 | MS.gene26526 | 0.832282 | 1.03E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene26526 | 0.86411 | 1.54E-64 | -1.69E-46 |
| MS.gene053824 | MS.gene26526 | 0.873098 | 1.91E-67 | -1.69E-46 |
| MS.gene053916 | MS.gene26526 | 0.803543 | 3.31E-49 | -1.69E-46 |
| MS.gene054003 | MS.gene26526 | 0.816454 | 5.48E-52 | -1.69E-46 |
| MS.gene054107 | MS.gene26526 | 0.805134 | 1.55E-49 | -1.69E-46 |
| MS.gene054270 | MS.gene26526 | -0.81008 | 1.38E-50 | -1.69E-46 |
| MS.gene054343 | MS.gene26526 | 0.820541 | 6.50E-53 | -1.69E-46 |
| MS.gene054344 | MS.gene26526 | 0.8552 | 7.40E-62 | -1.69E-46 |
| MS.gene054408 | MS.gene26526 | 0.824073 | 9.84E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene26526 | 0.873566 | 1.33E-67 | -1.69E-46 |
| MS.gene054600 | MS.gene26526 | 0.867027 | 1.85E-65 | -1.69E-46 |
| MS.gene054642 | MS.gene26526 | 0.845706 | 3.44E-59 | -1.69E-46 |
| MS.gene054706 | MS.gene26526 | -0.810002 | 1.43E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene26526 | 0.913157 | 8.52E-84 | -1.69E-46 |
| MS.gene054927 | MS.gene26526 | 0.835775 | 1.38E-56 | -1.69E-46 |
| MS.gene05494 | MS.gene26526 | 0.805607 | 1.23E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene26526 | 0.888066 | 8.21E-73 | -1.69E-46 |
| MS.gene055206 | MS.gene26526 | 0.831704 | 1.44E-55 | -1.69E-46 |
| MS.gene055224 | MS.gene26526 | 0.813312 | 2.73E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene26526 | 0.805799 | 1.12E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene26526 | 0.884514 | 1.80E-71 | -1.69E-46 |
| MS.gene055502 | MS.gene26526 | 0.895536 | 8.73E-76 | -1.69E-46 |
| MS.gene055577 | MS.gene26526 | 0.872604 | 2.80E-67 | -1.69E-46 |
| MS.gene055629 | MS.gene26526 | 0.811443 | 6.98E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene26526 | 0.808516 | 2.98E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene26526 | 0.844631 | 6.71E-59 | -1.69E-46 |
| MS.gene055750 | MS.gene26526 | 0.836137 | 1.12E-56 | -1.69E-46 |
| MS.gene055751 | MS.gene26526 | 0.843448 | 1.39E-58 | -1.69E-46 |
| MS.gene055776 | MS.gene26526 | 0.810753 | 9.86E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene26526 | 0.90435 | 1.35E-79 | -1.69E-46 |
| MS.gene055941 | MS.gene26526 | 0.855756 | 5.09E-62 | -1.69E-46 |
| MS.gene056040 | MS.gene26526 | 0.8397 | 1.35E-57 | -1.69E-46 |
| MS.gene056046 | MS.gene26526 | 0.826356 | 2.84E-54 | -1.69E-46 |
| MS.gene056166 | MS.gene26526 | 0.830823 | 2.36E-55 | -1.69E-46 |
| MS.gene056374 | MS.gene26526 | 0.812281 | 4.59E-51 | -1.69E-46 |
| MS.gene056387 | MS.gene26526 | 0.848693 | 5.21E-60 | -1.69E-46 |
| MS.gene056446 | MS.gene26526 | 0.811095 | 8.31E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene26526 | 0.896251 | 4.41E-76 | -1.69E-46 |
| MS.gene056510 | MS.gene26526 | 0.873126 | 1.87E-67 | -1.69E-46 |
| MS.gene056550 | MS.gene26526 | -0.800214 | 1.60E-48 | -1.69E-46 |
| MS.gene056610 | MS.gene26526 | 0.835884 | 1.29E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene26526 | 0.87542 | 3.12E-68 | -1.69E-46 |
| MS.gene056692 | MS.gene26526 | 0.867955 | 9.34E-66 | -1.69E-46 |
| MS.gene056877 | MS.gene26526 | 0.813796 | 2.13E-51 | -1.69E-46 |
| MS.gene056898 | MS.gene26526 | 0.843034 | 1.80E-58 | -1.69E-46 |
| MS.gene057048 | MS.gene26526 | 0.844559 | 7.02E-59 | -1.69E-46 |
| MS.gene057076 | MS.gene26526 | 0.858588 | 7.43E-63 | -1.69E-46 |
| MS.gene057196 | MS.gene26526 | 0.81432 | 1.64E-51 | -1.69E-46 |
| MS.gene057332 | MS.gene26526 | 0.830087 | 3.58E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene26526 | 0.838143 | 3.43E-57 | -1.69E-46 |
| MS.gene057658 | MS.gene26526 | 0.874281 | 7.64E-68 | -1.69E-46 |
| MS.gene057831 | MS.gene26526 | 0.880634 | 4.67E-70 | -1.69E-46 |
| MS.gene057856 | MS.gene26526 | 0.822916 | 1.83E-53 | -1.69E-46 |
| MS.gene057857 | MS.gene26526 | 0.820959 | 5.21E-53 | -1.69E-46 |
| MS.gene05787 | MS.gene26526 | 0.857488 | 1.58E-62 | -1.69E-46 |
| MS.gene058130 | MS.gene26526 | 0.818338 | 2.07E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene26526 | 0.827978 | 1.16E-54 | -1.69E-46 |
| MS.gene058334 | MS.gene26526 | -0.826481 | 2.65E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene26526 | 0.864191 | 1.45E-64 | -1.69E-46 |
| MS.gene05837 | MS.gene26526 | 0.87195 | 4.62E-67 | -1.69E-46 |
| MS.gene058419 | MS.gene26526 | 0.896269 | 4.34E-76 | -1.69E-46 |
| MS.gene058544 | MS.gene26526 | 0.877218 | 7.49E-69 | -1.69E-46 |
| MS.gene058691 | MS.gene26526 | -0.800825 | 1.20E-48 | -1.69E-46 |
| MS.gene058719 | MS.gene26526 | 0.81121 | 7.85E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene26526 | 0.800235 | 1.59E-48 | -1.69E-46 |
| MS.gene058773 | MS.gene26526 | 0.850897 | 1.26E-60 | -1.69E-46 |
| MS.gene058838 | MS.gene26526 | 0.880552 | 5.00E-70 | -1.69E-46 |
| MS.gene059022 | MS.gene26526 | 0.880071 | 7.42E-70 | -1.69E-46 |
| MS.gene059023 | MS.gene26526 | 0.917475 | 5.08E-86 | -1.69E-46 |
| MS.gene059103 | MS.gene26526 | -0.802039 | 6.78E-49 | -1.69E-46 |
| MS.gene05912 | MS.gene26526 | 0.801547 | 8.55E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene26526 | 0.802054 | 6.73E-49 | -1.69E-46 |
| MS.gene05914 | MS.gene26526 | 0.858385 | 8.54E-63 | -1.69E-46 |
| MS.gene059303 | MS.gene26526 | 0.81233 | 4.48E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene26526 | 0.824222 | 9.07E-54 | -1.69E-46 |
| MS.gene059367 | MS.gene26526 | 0.809233 | 2.09E-50 | -1.69E-46 |
| MS.gene059667 | MS.gene26526 | 0.844069 | 9.50E-59 | -1.69E-46 |
| MS.gene059677 | MS.gene26526 | 0.895039 | 1.40E-75 | -1.69E-46 |
| MS.gene059718 | MS.gene26526 | 0.876556 | 1.27E-68 | -1.69E-46 |
| MS.gene059756 | MS.gene26526 | 0.880003 | 7.85E-70 | -1.69E-46 |
| MS.gene059801 | MS.gene26526 | 0.800788 | 1.22E-48 | -1.69E-46 |
| MS.gene059837 | MS.gene26526 | 0.838585 | 2.63E-57 | -1.69E-46 |
| MS.gene059865 | MS.gene26526 | 0.869388 | 3.21E-66 | -1.69E-46 |
| MS.gene06000 | MS.gene26526 | 0.880662 | 4.56E-70 | -1.69E-46 |
| MS.gene06027 | MS.gene26526 | 0.829352 | 5.40E-55 | -1.69E-46 |
| MS.gene060485 | MS.gene26526 | 0.822594 | 2.18E-53 | -1.69E-46 |
| MS.gene060595 | MS.gene26526 | -0.805513 | 1.29E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene26526 | 0.857296 | 1.80E-62 | -1.69E-46 |
| MS.gene060762 | MS.gene26526 | 0.860275 | 2.31E-63 | -1.69E-46 |
| MS.gene060778 | MS.gene26526 | 0.880804 | 4.06E-70 | -1.69E-46 |
| MS.gene06077 | MS.gene26526 | 0.905532 | 3.89E-80 | -1.69E-46 |
| MS.gene060835 | MS.gene26526 | 0.835156 | 1.98E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene26526 | 0.866445 | 2.84E-65 | -1.69E-46 |
| MS.gene060982 | MS.gene26526 | 0.894415 | 2.52E-75 | -1.69E-46 |
| MS.gene061044 | MS.gene26526 | -0.82241 | 2.40E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene26526 | 0.854092 | 1.55E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene26526 | MS.gene054628 | PPI |
| MS.gene87834 | MS.gene26526 | PPI |
| MS.gene87835 | MS.gene26526 | PPI |
| MS.gene26526 | MS.gene047802 | PPI |
| MS.gene26526 | MS.gene48487 | PPI |
| MS.gene26526 | MS.gene87832 | PPI |
| MS.gene26526 | MS.gene23057 | PPI |
| MS.gene053470 | MS.gene26526 | PPI |
| MS.gene26526 | MS.gene019398 | PPI |
| MS.gene26526 | MS.gene37503 | PPI |
| MS.gene26526 | MS.gene053480 | PPI |
| MS.gene38730 | MS.gene26526 | PPI |
| MS.gene26526 | MS.gene047804 | PPI |
| MS.gene26526 | MS.gene051907 | PPI |
| MS.gene23692 | MS.gene26526 | PPI |
| MS.gene23641 | MS.gene26526 | PPI |
| MS.gene26526 | MS.gene37505 | PPI |
| MS.gene26526 | MS.gene23639 | PPI |
| MS.gene26526 | MS.gene26528 | PPI |
| MS.gene26526 | MS.gene012997 | PPI |
| MS.gene26526 | MS.gene051696 | PPI |
| MS.gene26526 | MS.gene053479 | PPI |
| MS.gene26526 | MS.gene23638 | PPI |
| MS.gene39628 | MS.gene26526 | PPI |
| MS.gene047803 | MS.gene26526 | PPI |
| MS.gene26526 | MS.gene37504 | PPI |
| MS.gene022960 | MS.gene26526 | PPI |
| MS.gene019395 | MS.gene26526 | PPI |
| MS.gene26527 | MS.gene26526 | PPI |
| MS.gene26526 | MS.gene019397 | PPI |
| MS.gene26526 | MS.gene39627 | PPI |
| MS.gene26526 | MS.gene007061 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26526.t1 | MTR_4g086470 | 95.312 | 320 | 15 | 0 | 1 | 320 | 1 | 320 | 0.0 | 605 |
| MS.gene26526.t1 | MTR_4g086480 | 85.047 | 321 | 47 | 1 | 1 | 320 | 1 | 321 | 0.0 | 583 |
| MS.gene26526.t1 | MTR_4g086510 | 62.848 | 323 | 114 | 3 | 1 | 320 | 1 | 320 | 6.64e-158 | 444 |
| MS.gene26526.t1 | MTR_7g056207 | 60.870 | 322 | 120 | 3 | 2 | 320 | 34 | 352 | 6.93e-150 | 425 |
| MS.gene26526.t1 | MTR_3g101420 | 44.551 | 312 | 162 | 4 | 14 | 319 | 10 | 316 | 3.47e-94 | 282 |
| MS.gene26526.t1 | MTR_5g005850 | 42.378 | 328 | 176 | 7 | 1 | 317 | 3 | 328 | 9.67e-94 | 281 |
| MS.gene26526.t1 | MTR_4g086540 | 45.714 | 315 | 151 | 4 | 3 | 317 | 10 | 304 | 7.12e-93 | 279 |
| MS.gene26526.t1 | MTR_1g105020 | 44.654 | 318 | 164 | 8 | 10 | 317 | 7 | 322 | 2.56e-91 | 275 |
| MS.gene26526.t1 | MTR_3g450680 | 43.119 | 327 | 175 | 6 | 3 | 319 | 8 | 333 | 5.27e-90 | 272 |
| MS.gene26526.t1 | MTR_8g040860 | 43.533 | 317 | 171 | 6 | 10 | 319 | 15 | 330 | 1.38e-84 | 258 |
| MS.gene26526.t1 | MTR_5g005920 | 38.788 | 330 | 189 | 9 | 2 | 319 | 4 | 332 | 2.28e-77 | 239 |
| MS.gene26526.t1 | MTR_7g051020 | 42.236 | 322 | 177 | 6 | 4 | 317 | 5 | 325 | 4.62e-76 | 236 |
| MS.gene26526.t1 | MTR_1g104930 | 43.478 | 322 | 170 | 7 | 4 | 317 | 5 | 322 | 1.04e-74 | 233 |
| MS.gene26526.t1 | MTR_5g005900 | 40.000 | 330 | 181 | 8 | 4 | 319 | 2 | 328 | 1.82e-73 | 229 |
| MS.gene26526.t1 | MTR_1g104933 | 42.547 | 322 | 171 | 8 | 3 | 317 | 2 | 316 | 2.12e-68 | 216 |
| MS.gene26526.t1 | MTR_1g012430 | 38.535 | 314 | 177 | 8 | 14 | 320 | 6 | 310 | 9.93e-56 | 183 |
| MS.gene26526.t1 | MTR_4g050140 | 35.806 | 310 | 187 | 7 | 18 | 319 | 12 | 317 | 4.55e-54 | 179 |
| MS.gene26526.t1 | MTR_1g111280 | 34.114 | 299 | 177 | 5 | 14 | 300 | 29 | 319 | 3.34e-49 | 167 |
| MS.gene26526.t1 | MTR_7g406880 | 33.550 | 307 | 172 | 9 | 18 | 300 | 28 | 326 | 1.04e-45 | 159 |
| MS.gene26526.t1 | MTR_1g102160 | 34.182 | 275 | 157 | 7 | 23 | 279 | 23 | 291 | 8.43e-42 | 147 |
| MS.gene26526.t1 | MTR_3g012440 | 32.353 | 272 | 169 | 5 | 61 | 319 | 73 | 342 | 3.47e-40 | 144 |
| MS.gene26526.t1 | MTR_6g464320 | 33.221 | 298 | 170 | 11 | 38 | 317 | 39 | 325 | 1.54e-39 | 142 |
| MS.gene26526.t1 | MTR_6g464120 | 35.094 | 265 | 157 | 6 | 24 | 277 | 29 | 289 | 2.09e-39 | 145 |
| MS.gene26526.t1 | MTR_7g107040 | 30.449 | 312 | 204 | 7 | 14 | 317 | 10 | 316 | 2.58e-39 | 141 |
| MS.gene26526.t1 | MTR_8g035520 | 33.788 | 293 | 177 | 7 | 36 | 317 | 38 | 324 | 2.78e-38 | 138 |
| MS.gene26526.t1 | MTR_6g065120 | 32.476 | 311 | 185 | 7 | 24 | 319 | 37 | 337 | 3.07e-37 | 136 |
| MS.gene26526.t1 | MTR_6g464280 | 33.557 | 298 | 169 | 10 | 38 | 317 | 38 | 324 | 4.60e-37 | 135 |
| MS.gene26526.t1 | MTR_6g065430 | 33.770 | 305 | 183 | 8 | 24 | 319 | 35 | 329 | 5.63e-37 | 135 |
| MS.gene26526.t1 | MTR_6g065110 | 31.169 | 308 | 188 | 7 | 24 | 317 | 37 | 334 | 7.62e-37 | 135 |
| MS.gene26526.t1 | MTR_8g035540 | 33.670 | 297 | 174 | 9 | 38 | 320 | 32 | 319 | 3.58e-36 | 133 |
| MS.gene26526.t1 | MTR_6g065370 | 32.095 | 296 | 178 | 6 | 38 | 319 | 49 | 335 | 2.50e-35 | 131 |
| MS.gene26526.t1 | MTR_6g065400 | 31.757 | 296 | 179 | 6 | 38 | 319 | 49 | 335 | 4.48e-35 | 130 |
| MS.gene26526.t1 | MTR_6g065340 | 31.507 | 292 | 169 | 6 | 38 | 319 | 60 | 330 | 1.99e-34 | 128 |
| MS.gene26526.t1 | MTR_1g089310 | 32.540 | 252 | 150 | 7 | 73 | 317 | 102 | 340 | 2.21e-34 | 128 |
| MS.gene26526.t1 | MTR_1g089310 | 32.540 | 252 | 150 | 7 | 73 | 317 | 118 | 356 | 2.29e-34 | 129 |
| MS.gene26526.t1 | MTR_6g065270 | 31.561 | 301 | 177 | 9 | 38 | 319 | 47 | 337 | 4.48e-34 | 127 |
| MS.gene26526.t1 | MTR_6g464510 | 32.333 | 300 | 168 | 11 | 38 | 317 | 42 | 326 | 8.15e-34 | 126 |
| MS.gene26526.t1 | MTR_1g102170 | 31.579 | 266 | 162 | 7 | 24 | 276 | 43 | 301 | 3.27e-33 | 125 |
| MS.gene26526.t1 | MTR_0007s0520 | 31.157 | 337 | 194 | 12 | 1 | 320 | 12 | 327 | 4.66e-33 | 124 |
| MS.gene26526.t1 | MTR_8g035500 | 32.806 | 253 | 157 | 5 | 38 | 279 | 33 | 283 | 1.00e-32 | 123 |
| MS.gene26526.t1 | MTR_7g093950 | 31.660 | 259 | 148 | 8 | 73 | 317 | 103 | 346 | 6.92e-32 | 122 |
| MS.gene26526.t1 | MTR_1g082210 | 29.836 | 305 | 180 | 11 | 33 | 317 | 50 | 340 | 9.46e-31 | 119 |
| MS.gene26526.t1 | MTR_6g022710 | 29.008 | 262 | 142 | 10 | 74 | 296 | 158 | 414 | 1.55e-17 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26526.t1 | AT3G48690 | 47.975 | 321 | 158 | 6 | 7 | 318 | 1 | 321 | 6.89e-101 | 300 |
| MS.gene26526.t1 | AT1G47480 | 46.729 | 321 | 159 | 5 | 1 | 319 | 1 | 311 | 1.23e-99 | 296 |
| MS.gene26526.t1 | AT1G19190 | 46.541 | 318 | 162 | 5 | 7 | 319 | 1 | 315 | 2.32e-99 | 295 |
| MS.gene26526.t1 | AT2G03550 | 46.729 | 321 | 154 | 5 | 7 | 319 | 1 | 312 | 2.98e-99 | 295 |
| MS.gene26526.t1 | AT3G48700 | 45.399 | 326 | 164 | 6 | 7 | 318 | 1 | 326 | 8.55e-99 | 294 |
| MS.gene26526.t1 | AT1G49650 | 48.377 | 308 | 152 | 6 | 16 | 317 | 66 | 372 | 2.94e-94 | 284 |
| MS.gene26526.t1 | AT1G49660 | 48.137 | 322 | 151 | 4 | 7 | 317 | 1 | 317 | 4.28e-93 | 280 |
| MS.gene26526.t1 | AT1G49640 | 47.078 | 308 | 150 | 7 | 17 | 317 | 12 | 313 | 3.26e-90 | 272 |
| MS.gene26526.t1 | AT1G68620 | 31.595 | 326 | 197 | 10 | 5 | 317 | 17 | 329 | 8.25e-45 | 156 |
| MS.gene26526.t1 | AT5G16080 | 31.683 | 303 | 183 | 9 | 14 | 302 | 31 | 323 | 4.28e-39 | 141 |
| MS.gene26526.t1 | AT5G06570 | 32.915 | 319 | 201 | 7 | 10 | 317 | 9 | 325 | 1.94e-38 | 139 |
| MS.gene26526.t1 | AT5G06570 | 32.915 | 319 | 201 | 7 | 10 | 317 | 9 | 325 | 1.94e-38 | 139 |
| MS.gene26526.t1 | AT5G06570 | 32.915 | 319 | 201 | 7 | 10 | 317 | 24 | 340 | 3.19e-38 | 139 |
| MS.gene26526.t1 | AT5G06570 | 32.915 | 319 | 201 | 7 | 10 | 317 | 24 | 340 | 3.19e-38 | 139 |
| MS.gene26526.t1 | AT2G45600 | 31.864 | 295 | 182 | 8 | 38 | 320 | 31 | 318 | 1.21e-35 | 131 |
| MS.gene26526.t1 | AT5G27320 | 29.703 | 303 | 182 | 9 | 33 | 317 | 50 | 339 | 5.04e-34 | 127 |
| MS.gene26526.t1 | AT2G45610 | 32.534 | 292 | 179 | 8 | 38 | 317 | 38 | 323 | 6.39e-34 | 127 |
| MS.gene26526.t1 | AT3G05120 | 29.508 | 305 | 182 | 10 | 33 | 317 | 50 | 341 | 7.16e-34 | 127 |
| MS.gene26526.t1 | AT3G63010 | 32.463 | 268 | 149 | 9 | 33 | 279 | 50 | 306 | 1.96e-31 | 121 |
| MS.gene26526.t1 | AT5G23530 | 30.690 | 290 | 178 | 9 | 37 | 317 | 51 | 326 | 2.93e-31 | 120 |
| MS.gene26526.t1 | AT5G62180 | 31.273 | 275 | 161 | 8 | 38 | 295 | 38 | 301 | 2.49e-30 | 117 |
Find 70 sgRNAs with CRISPR-Local
Find 104 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGGTGGGTGATTGGTTT+TGG | 0.145456 | 4.1:-23350824 | None:intergenic |
| GCTAATATTTCACACTATTT+AGG | 0.162895 | 4.1:+23351135 | MS.gene26526:CDS |
| TCGGGTTGGGAAGGAAAATT+TGG | 0.173463 | 4.1:+23351161 | MS.gene26526:CDS |
| TTTAGATTCAACGTTGGTTT+TGG | 0.202200 | 4.1:-23350752 | None:intergenic |
| ACTTCACTTGCTAATGTTAT+TGG | 0.227846 | 4.1:+23350940 | MS.gene26526:CDS |
| TTTCACACTATTTAGGTATT+CGG | 0.247513 | 4.1:+23351142 | MS.gene26526:CDS |
| CCATTGCTCATGAAGATTCA+TGG | 0.261987 | 4.1:+23351004 | MS.gene26526:CDS |
| TTGAGGTAGTTATGGTAGTT+TGG | 0.286089 | 4.1:-23350910 | None:intergenic |
| AGTTGTATCCTTCATCAAAA+AGG | 0.305612 | 4.1:+23351563 | MS.gene26526:CDS |
| CCCGGCTAATGATCCCGATT+TGG | 0.313711 | 4.1:+23351344 | MS.gene26526:CDS |
| CCGGCTAATGATCCCGATTT+GGG | 0.325716 | 4.1:+23351345 | MS.gene26526:CDS |
| TTCACACTATTTAGGTATTC+GGG | 0.330293 | 4.1:+23351143 | MS.gene26526:CDS |
| CTTTCTCAAAATCTGCATAT+TGG | 0.331880 | 4.1:-23351086 | None:intergenic |
| AGATTGCTTGTTTGTGTTGC+TGG | 0.344082 | 4.1:+23351384 | MS.gene26526:CDS |
| CCTGTCTTTGTTTACTTTCA+CGG | 0.344106 | 4.1:+23350856 | MS.gene26526:CDS |
| TGCTGAGATGTTATGTTCTT+CGG | 0.344889 | 4.1:-23350788 | None:intergenic |
| GGTCGTGTGGAAAATCTAAT+AGG | 0.345060 | 4.1:+23350700 | MS.gene26526:CDS |
| GCTTCACATGTTGGTGGAAA+TGG | 0.350595 | 4.1:+23351045 | MS.gene26526:CDS |
| AATTGGATCAGAATCAAATA+TGG | 0.360234 | 4.1:+23351242 | MS.gene26526:CDS |
| ATTCATGGCTTGCACTCAAA+TGG | 0.361551 | 4.1:+23351019 | MS.gene26526:CDS |
| TAGAAAAGATTCATAATTTG+TGG | 0.374091 | 4.1:+23351274 | MS.gene26526:CDS |
| TCTTCATGAGCAATGGGAAC+AGG | 0.384148 | 4.1:-23350997 | None:intergenic |
| AATGGCTATTTCGTCGTTGA+TGG | 0.384770 | 4.1:-23350644 | None:intergenic |
| TTGGATGGTTTGAAACTTGA+AGG | 0.392629 | 4.1:+23351180 | MS.gene26526:CDS |
| TAACAGAGTTGAGGTAGTTA+TGG | 0.398147 | 4.1:-23350918 | None:intergenic |
| TTATGGTAGTTTGGTGAGAA+AGG | 0.405757 | 4.1:-23350901 | None:intergenic |
| TGATCCCGATTTGGGGAAGT+TGG | 0.407781 | 4.1:+23351353 | MS.gene26526:CDS |
| ACAACCCAACTTCCCCAAAT+CGG | 0.414443 | 4.1:-23351358 | None:intergenic |
| AATCAACGGGTCGTCAGATC+CGG | 0.425185 | 4.1:-23351319 | None:intergenic |
| ACTATTTAGGTATTCGGGTT+GGG | 0.437675 | 4.1:+23351148 | MS.gene26526:CDS |
| CACTATTTAGGTATTCGGGT+TGG | 0.438593 | 4.1:+23351147 | MS.gene26526:CDS |
| GATCCCGATTTGGGGAAGTT+GGG | 0.451553 | 4.1:+23351354 | MS.gene26526:CDS |
| CCCAAATCGGGATCATTAGC+CGG | 0.457367 | 4.1:-23351345 | None:intergenic |
| GCAATGGGAACAGGGTGTTC+CGG | 0.459329 | 4.1:-23350988 | None:intergenic |
| TTTGTTTACTTTCACGGCGG+TGG | 0.469368 | 4.1:+23350862 | MS.gene26526:CDS |
| CATTAGCCGGGTTAATCAAC+GGG | 0.471264 | 4.1:-23351332 | None:intergenic |
| GACATAGCATTCTCACAACT+TGG | 0.472647 | 4.1:-23351528 | None:intergenic |
| CCAAATCGGGATCATTAGCC+GGG | 0.473736 | 4.1:-23351344 | None:intergenic |
| CAACCCAACTTCCCCAAATC+GGG | 0.476448 | 4.1:-23351357 | None:intergenic |
| TTCATGGCTTGCACTCAAAT+GGG | 0.480049 | 4.1:+23351020 | MS.gene26526:CDS |
| AAGTGGTTGGGGTGGTGTTG+TGG | 0.481631 | 4.1:+23351458 | MS.gene26526:CDS |
| CATGAATCTTCATGAGCAAT+GGG | 0.488874 | 4.1:-23351003 | None:intergenic |
| GATTGCTTGTTTGTGTTGCT+GGG | 0.495692 | 4.1:+23351385 | MS.gene26526:CDS |
| CCGTGAAAGTAAACAAAGAC+AGG | 0.497695 | 4.1:-23350856 | None:intergenic |
| GGCTATTTCGTCGTTGATGG+TGG | 0.504951 | 4.1:-23350641 | None:intergenic |
| TTTGAGAAAGTGTTCTTAGG+AGG | 0.509667 | 4.1:+23351099 | MS.gene26526:CDS |
| CCATGAATCTTCATGAGCAA+TGG | 0.523102 | 4.1:-23351004 | None:intergenic |
| TCGTCAGATCCGGTCGTGGT+TGG | 0.537151 | 4.1:-23351309 | None:intergenic |
| TTTACATGTCCAACCACGAC+CGG | 0.538692 | 4.1:+23351300 | MS.gene26526:CDS |
| TGGATGGTTTGAAACTTGAA+GGG | 0.541623 | 4.1:+23351181 | MS.gene26526:CDS |
| GTGGAAATGGCTCTGATGAA+TGG | 0.542774 | 4.1:+23351058 | MS.gene26526:CDS |
| TATTTCGTCGTTGATGGTGG+AGG | 0.545398 | 4.1:-23350638 | None:intergenic |
| TTCTTAGGAGGTGATAGTGC+TGG | 0.559579 | 4.1:+23351111 | MS.gene26526:CDS |
| TCATTAGCCGGGTTAATCAA+CGG | 0.564768 | 4.1:-23351333 | None:intergenic |
| TTTAGGTATTCGGGTTGGGA+AGG | 0.565483 | 4.1:+23351152 | MS.gene26526:CDS |
| CGGGTCGTCAGATCCGGTCG+TGG | 0.575435 | 4.1:-23351313 | None:intergenic |
| AAATGGGTTGCTTCACATGT+TGG | 0.579541 | 4.1:+23351036 | MS.gene26526:CDS |
| GTTGGGAAGGAAAATTTGGA+TGG | 0.592142 | 4.1:+23351165 | MS.gene26526:CDS |
| TTTGTATACTCTCAAGATTG+GGG | 0.592780 | 4.1:-23350674 | None:intergenic |
| CTTCATGAGCAATGGGAACA+GGG | 0.596332 | 4.1:-23350996 | None:intergenic |
| TGGGTTGCTTCACATGTTGG+TGG | 0.616285 | 4.1:+23351039 | MS.gene26526:CDS |
| TTGTATACTCTCAAGATTGG+GGG | 0.619560 | 4.1:-23350673 | None:intergenic |
| TGTTCACTACAGAAGAGCAC+CGG | 0.621670 | 4.1:+23350969 | MS.gene26526:CDS |
| TGACGACCCGTTGATTAACC+CGG | 0.631546 | 4.1:+23351326 | MS.gene26526:CDS |
| GTCTTTGTTTACTTTCACGG+CGG | 0.634625 | 4.1:+23350859 | MS.gene26526:CDS |
| CGTGAAAGTAAACAAAGACA+GGG | 0.635829 | 4.1:-23350855 | None:intergenic |
| AACGTCTTTAGATTCAACGT+TGG | 0.641244 | 4.1:-23350758 | None:intergenic |
| CGGCTAATGATCCCGATTTG+GGG | 0.655506 | 4.1:+23351346 | MS.gene26526:CDS |
| TGTGGAAGTTGTTGAAACAG+AGG | 0.656063 | 4.1:+23351476 | MS.gene26526:CDS |
| CAAGTGAAGTAACAGAGTTG+AGG | 0.663575 | 4.1:-23350927 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGAAAAGATTCATAATTTG+TGG | + | chr4.1:23351274-23351293 | MS.gene26526:CDS | 20.0% |
| !!! | TTATATCCATCCTTATTTTT+GGG | + | chr4.1:23351209-23351228 | MS.gene26526:CDS | 20.0% |
| !!! | TTTATATCCATCCTTATTTT+TGG | + | chr4.1:23351208-23351227 | MS.gene26526:CDS | 20.0% |
| ! | AAAGAATTGCTTGAAAAAAG+TGG | + | chr4.1:23351441-23351460 | MS.gene26526:CDS | 25.0% |
| ! | AATTGGATCAGAATCAAATA+TGG | + | chr4.1:23351242-23351261 | MS.gene26526:CDS | 25.0% |
| ! | GCTAATATTTCACACTATTT+AGG | + | chr4.1:23351135-23351154 | MS.gene26526:CDS | 25.0% |
| ! | TTTCACACTATTTAGGTATT+CGG | + | chr4.1:23351142-23351161 | MS.gene26526:CDS | 25.0% |
| !! | ATCTTGAGAGTATACAAAAA+CGG | + | chr4.1:23350679-23350698 | MS.gene26526:CDS | 25.0% |
| !! | TTTTGTATACTCTCAAGATT+GGG | - | chr4.1:23350678-23350697 | None:intergenic | 25.0% |
| !! | TTTTTGTATACTCTCAAGAT+TGG | - | chr4.1:23350679-23350698 | None:intergenic | 25.0% |
| !!! | TATATCCATCCTTATTTTTG+GGG | + | chr4.1:23351210-23351229 | MS.gene26526:CDS | 25.0% |
| AATTGCTTGAAAAAAGTGGT+TGG | + | chr4.1:23351445-23351464 | MS.gene26526:CDS | 30.0% | |
| AGTTGTATCCTTCATCAAAA+AGG | + | chr4.1:23351563-23351582 | MS.gene26526:CDS | 30.0% | |
| ATTGCTTGAAAAAAGTGGTT+GGG | + | chr4.1:23351446-23351465 | MS.gene26526:CDS | 30.0% | |
| CTTTCTCAAAATCTGCATAT+TGG | - | chr4.1:23351089-23351108 | None:intergenic | 30.0% | |
| TTCACACTATTTAGGTATTC+GGG | + | chr4.1:23351143-23351162 | MS.gene26526:CDS | 30.0% | |
| TTTGTATACTCTCAAGATTG+GGG | - | chr4.1:23350677-23350696 | None:intergenic | 30.0% | |
| ! | ACTTCACTTGCTAATGTTAT+TGG | + | chr4.1:23350940-23350959 | MS.gene26526:CDS | 30.0% |
| ! | TTTTGATGAAGGATACAACT+TGG | - | chr4.1:23351563-23351582 | None:intergenic | 30.0% |
| !! | AAAGATATTTTGAGGGATAG+GGG | + | chr4.1:23351408-23351427 | MS.gene26526:CDS | 30.0% |
| !! | GAAAGATATTTTGAGGGATA+GGG | + | chr4.1:23351407-23351426 | MS.gene26526:CDS | 30.0% |
| !!! | GATTTTGAGAAAGTGTTCTT+AGG | + | chr4.1:23351096-23351115 | MS.gene26526:CDS | 30.0% |
| !!! | TTAGATTCAACGTTGGTTTT+GGG | - | chr4.1:23350754-23350773 | None:intergenic | 30.0% |
| !!! | TTTAGATTCAACGTTGGTTT+TGG | - | chr4.1:23350755-23350774 | None:intergenic | 30.0% |
| AACGTCTTTAGATTCAACGT+TGG | - | chr4.1:23350761-23350780 | None:intergenic | 35.0% | |
| CATGAATCTTCATGAGCAAT+GGG | - | chr4.1:23351006-23351025 | None:intergenic | 35.0% | |
| CGTGAAAGTAAACAAAGACA+GGG | - | chr4.1:23350858-23350877 | None:intergenic | 35.0% | |
| TAACAGAGTTGAGGTAGTTA+TGG | - | chr4.1:23350921-23350940 | None:intergenic | 35.0% | |
| TGCTGAGATGTTATGTTCTT+CGG | - | chr4.1:23350791-23350810 | None:intergenic | 35.0% | |
| TTGAGGTAGTTATGGTAGTT+TGG | - | chr4.1:23350913-23350932 | None:intergenic | 35.0% | |
| TTGCTTGAAAAAAGTGGTTG+GGG | + | chr4.1:23351447-23351466 | MS.gene26526:CDS | 35.0% | |
| TTGTATACTCTCAAGATTGG+GGG | - | chr4.1:23350676-23350695 | None:intergenic | 35.0% | |
| ! | AAACAAAGACAGGGAGTTTT+TGG | - | chr4.1:23350849-23350868 | None:intergenic | 35.0% |
| ! | AACAAAGACAGGGAGTTTTT+GGG | - | chr4.1:23350848-23350867 | None:intergenic | 35.0% |
| ! | ACTATTTAGGTATTCGGGTT+GGG | + | chr4.1:23351148-23351167 | MS.gene26526:CDS | 35.0% |
| ! | CCTGTCTTTGTTTACTTTCA+CGG | + | chr4.1:23350856-23350875 | MS.gene26526:CDS | 35.0% |
| ! | TGGATGGTTTGAAACTTGAA+GGG | + | chr4.1:23351181-23351200 | MS.gene26526:CDS | 35.0% |
| ! | TTATGGTAGTTTGGTGAGAA+AGG | - | chr4.1:23350904-23350923 | None:intergenic | 35.0% |
| ! | TTGCTGGGAAAGATATTTTG+AGG | + | chr4.1:23351400-23351419 | MS.gene26526:CDS | 35.0% |
| ! | TTGGATGGTTTGAAACTTGA+AGG | + | chr4.1:23351180-23351199 | MS.gene26526:CDS | 35.0% |
| !! | GGAAAGATATTTTGAGGGAT+AGG | + | chr4.1:23351406-23351425 | MS.gene26526:CDS | 35.0% |
| !! | TGCTGGGAAAGATATTTTGA+GGG | + | chr4.1:23351401-23351420 | MS.gene26526:CDS | 35.0% |
| !! | TTTGAGAAAGTGTTCTTAGG+AGG | + | chr4.1:23351099-23351118 | MS.gene26526:CDS | 35.0% |
| AGATTGCTTGTTTGTGTTGC+TGG | + | chr4.1:23351384-23351403 | MS.gene26526:CDS | 40.0% | |
| AGTATACAAAAACGGTCGTG+TGG | + | chr4.1:23350687-23350706 | MS.gene26526:CDS | 40.0% | |
| CAAGTGAAGTAACAGAGTTG+AGG | - | chr4.1:23350930-23350949 | None:intergenic | 40.0% | |
| CACTATTTAGGTATTCGGGT+TGG | + | chr4.1:23351147-23351166 | MS.gene26526:CDS | 40.0% | |
| CCATGAATCTTCATGAGCAA+TGG | - | chr4.1:23351007-23351026 | None:intergenic | 40.0% | |
| CCATTGCTCATGAAGATTCA+TGG | + | chr4.1:23351004-23351023 | MS.gene26526:CDS | 40.0% | |
| CCGTGAAAGTAAACAAAGAC+AGG | - | chr4.1:23350859-23350878 | None:intergenic | 40.0% | |
| GACATAGCATTCTCACAACT+TGG | - | chr4.1:23351531-23351550 | None:intergenic | 40.0% | |
| GGTCGTGTGGAAAATCTAAT+AGG | + | chr4.1:23350700-23350719 | MS.gene26526:CDS | 40.0% | |
| GTTGGGAAGGAAAATTTGGA+TGG | + | chr4.1:23351165-23351184 | MS.gene26526:CDS | 40.0% | |
| TCATTAGCCGGGTTAATCAA+CGG | - | chr4.1:23351336-23351355 | None:intergenic | 40.0% | |
| TGTGGAAGTTGTTGAAACAG+AGG | + | chr4.1:23351476-23351495 | MS.gene26526:CDS | 40.0% | |
| ! | AATGGCTATTTCGTCGTTGA+TGG | - | chr4.1:23350647-23350666 | None:intergenic | 40.0% |
| ! | ATTCATGGCTTGCACTCAAA+TGG | + | chr4.1:23351019-23351038 | MS.gene26526:CDS | 40.0% |
| ! | CAAGATTGGGGGTATATCAA+TGG | - | chr4.1:23350665-23350684 | None:intergenic | 40.0% |
| ! | GATTGCTTGTTTGTGTTGCT+GGG | + | chr4.1:23351385-23351404 | MS.gene26526:CDS | 40.0% |
| ! | GTCTTTGTTTACTTTCACGG+CGG | + | chr4.1:23350859-23350878 | MS.gene26526:CDS | 40.0% |
| ! | TTCATGGCTTGCACTCAAAT+GGG | + | chr4.1:23351020-23351039 | MS.gene26526:CDS | 40.0% |
| !! | AAATGGGTTGCTTCACATGT+TGG | + | chr4.1:23351036-23351055 | MS.gene26526:CDS | 40.0% |
| !!! | TTGGTTTTGGGATCAAGAGA+TGG | - | chr4.1:23350742-23350761 | None:intergenic | 40.0% |
| ACAACCCAACTTCCCCAAAT+CGG | - | chr4.1:23351361-23351380 | None:intergenic | 45.0% | |
| CATTAGCCGGGTTAATCAAC+GGG | - | chr4.1:23351335-23351354 | None:intergenic | 45.0% | |
| CCACACCCCAAAAATAAGGA+TGG | - | chr4.1:23351218-23351237 | None:intergenic | 45.0% | |
| CGATCCACACCCCAAAAATA+AGG | - | chr4.1:23351222-23351241 | None:intergenic | 45.0% | |
| CTTCATGAGCAATGGGAACA+GGG | - | chr4.1:23350999-23351018 | None:intergenic | 45.0% | |
| CTTGAAAAAAGTGGTTGGGG+TGG | + | chr4.1:23351450-23351469 | MS.gene26526:CDS | 45.0% | |
| TCTTCATGAGCAATGGGAAC+AGG | - | chr4.1:23351000-23351019 | None:intergenic | 45.0% | |
| TTTACATGTCCAACCACGAC+CGG | + | chr4.1:23351300-23351319 | MS.gene26526:CDS | 45.0% | |
| TTTGTTTACTTTCACGGCGG+TGG | + | chr4.1:23350862-23350881 | MS.gene26526:CDS | 45.0% | |
| ! | GCTTCACATGTTGGTGGAAA+TGG | + | chr4.1:23351045-23351064 | MS.gene26526:CDS | 45.0% |
| ! | TGTTCACTACAGAAGAGCAC+CGG | + | chr4.1:23350969-23350988 | MS.gene26526:CDS | 45.0% |
| ! | TTCTTAGGAGGTGATAGTGC+TGG | + | chr4.1:23351111-23351130 | MS.gene26526:CDS | 45.0% |
| !! | GTGGAAATGGCTCTGATGAA+TGG | + | chr4.1:23351058-23351077 | MS.gene26526:CDS | 45.0% |
| !! | TATTTCGTCGTTGATGGTGG+AGG | - | chr4.1:23350641-23350660 | None:intergenic | 45.0% |
| !! | TCGGGTTGGGAAGGAAAATT+TGG | + | chr4.1:23351161-23351180 | MS.gene26526:CDS | 45.0% |
| !! | TTTAGGTATTCGGGTTGGGA+AGG | + | chr4.1:23351152-23351171 | MS.gene26526:CDS | 45.0% |
| !!! | AAGACAGGGAGTTTTTGGGT+TGG | - | chr4.1:23350844-23350863 | None:intergenic | 45.0% |
| !!! | CCATCCTTATTTTTGGGGTG+TGG | + | chr4.1:23351215-23351234 | MS.gene26526:CDS | 45.0% |
| !!! | GTTGGTGGGTGATTGGTTTT+GGG | - | chr4.1:23350826-23350845 | None:intergenic | 45.0% |
| !!! | GTTTTGGGATCAAGAGATGG+AGG | - | chr4.1:23350739-23350758 | None:intergenic | 45.0% |
| !!! | TTTTGGGGTGTGGATCGAAT+TGG | + | chr4.1:23351225-23351244 | MS.gene26526:CDS | 45.0% |
| !!! | TTTTTGGGTTGGTGGGTGAT+TGG | - | chr4.1:23350833-23350852 | None:intergenic | 45.0% |
| AATCAACGGGTCGTCAGATC+CGG | - | chr4.1:23351322-23351341 | None:intergenic | 50.0% | |
| CAACCCAACTTCCCCAAATC+GGG | - | chr4.1:23351360-23351379 | None:intergenic | 50.0% | |
| CCAAATCGGGATCATTAGCC+GGG | - | chr4.1:23351347-23351366 | None:intergenic | 50.0% | |
| CCCAAATCGGGATCATTAGC+CGG | - | chr4.1:23351348-23351367 | None:intergenic | 50.0% | |
| CCGGCTAATGATCCCGATTT+GGG | + | chr4.1:23351345-23351364 | MS.gene26526:CDS | 50.0% | |
| TGGGTTGCTTCACATGTTGG+TGG | + | chr4.1:23351039-23351058 | MS.gene26526:CDS | 50.0% | |
| ! | CGGCTAATGATCCCGATTTG+GGG | + | chr4.1:23351346-23351365 | MS.gene26526:CDS | 50.0% |
| ! | GGCTATTTCGTCGTTGATGG+TGG | - | chr4.1:23350644-23350663 | None:intergenic | 50.0% |
| ! | TGACGACCCGTTGATTAACC+CGG | + | chr4.1:23351326-23351345 | MS.gene26526:CDS | 50.0% |
| !! | GATCCCGATTTGGGGAAGTT+GGG | + | chr4.1:23351354-23351373 | MS.gene26526:CDS | 50.0% |
| !! | TGATCCCGATTTGGGGAAGT+TGG | + | chr4.1:23351353-23351372 | MS.gene26526:CDS | 50.0% |
| !!! | ACAGGGAGTTTTTGGGTTGG+TGG | - | chr4.1:23350841-23350860 | None:intergenic | 50.0% |
| !!! | CAGGGAGTTTTTGGGTTGGT+GGG | - | chr4.1:23350840-23350859 | None:intergenic | 50.0% |
| !!! | GGTTGGTGGGTGATTGGTTT+TGG | - | chr4.1:23350827-23350846 | None:intergenic | 50.0% |
| CCCGGCTAATGATCCCGATT+TGG | + | chr4.1:23351344-23351363 | MS.gene26526:CDS | 55.0% | |
| ! | AAGTGGTTGGGGTGGTGTTG+TGG | + | chr4.1:23351458-23351477 | MS.gene26526:CDS | 55.0% |
| ! | GCAATGGGAACAGGGTGTTC+CGG | - | chr4.1:23350991-23351010 | None:intergenic | 55.0% |
| TCGTCAGATCCGGTCGTGGT+TGG | - | chr4.1:23351312-23351331 | None:intergenic | 60.0% | |
| CGGGTCGTCAGATCCGGTCG+TGG | - | chr4.1:23351316-23351335 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 23350628 | 23351590 | 23350628 | ID=MS.gene26526 |
| chr4.1 | mRNA | 23350628 | 23351590 | 23350628 | ID=MS.gene26526.t1;Parent=MS.gene26526 |
| chr4.1 | exon | 23350628 | 23351590 | 23350628 | ID=MS.gene26526.t1.exon1;Parent=MS.gene26526.t1 |
| chr4.1 | CDS | 23350628 | 23351590 | 23350628 | ID=cds.MS.gene26526.t1;Parent=MS.gene26526.t1 |
| Gene Sequence |
| Protein sequence |
