Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26527.t1 | AES90204.1 | 97.5 | 321 | 8 | 0 | 1 | 321 | 1 | 321 | 1.80E-188 | 668.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26527.t1 | Q9SMN0 | 48.1 | 322 | 158 | 6 | 8 | 320 | 1 | 322 | 4.7e-89 | 329.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26527.t1 | G7JMF0 | 97.5 | 321 | 8 | 0 | 1 | 321 | 1 | 321 | 1.3e-188 | 668.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene26527 | 0.812455 | 4.20E-51 | -1.69E-46 |
| MS.gene049171 | MS.gene26527 | 0.858966 | 5.73E-63 | -1.69E-46 |
| MS.gene049217 | MS.gene26527 | 0.829977 | 3.81E-55 | -1.69E-46 |
| MS.gene049222 | MS.gene26527 | 0.832908 | 7.23E-56 | -1.69E-46 |
| MS.gene049232 | MS.gene26527 | 0.813587 | 2.37E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene26527 | 0.843608 | 1.26E-58 | -1.69E-46 |
| MS.gene049320 | MS.gene26527 | 0.830752 | 2.46E-55 | -1.69E-46 |
| MS.gene049373 | MS.gene26527 | 0.804945 | 1.69E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene26527 | 0.834728 | 2.53E-56 | -1.69E-46 |
| MS.gene04939 | MS.gene26527 | 0.868663 | 5.52E-66 | -1.69E-46 |
| MS.gene049488 | MS.gene26527 | 0.819027 | 1.44E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene26527 | 0.837834 | 4.11E-57 | -1.69E-46 |
| MS.gene049611 | MS.gene26527 | -0.808831 | 2.55E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene26527 | 0.862627 | 4.43E-64 | -1.69E-46 |
| MS.gene049805 | MS.gene26527 | 0.832498 | 9.14E-56 | -1.69E-46 |
| MS.gene049865 | MS.gene26527 | 0.807943 | 3.95E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene26527 | 0.806089 | 9.74E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene26527 | 0.819233 | 1.29E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene26527 | 0.8123 | 4.55E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene26527 | 0.864929 | 8.54E-65 | -1.69E-46 |
| MS.gene050323 | MS.gene26527 | 0.849422 | 3.27E-60 | -1.69E-46 |
| MS.gene050444 | MS.gene26527 | 0.845541 | 3.81E-59 | -1.69E-46 |
| MS.gene050496 | MS.gene26527 | 0.853463 | 2.35E-61 | -1.69E-46 |
| MS.gene050504 | MS.gene26527 | 0.85214 | 5.61E-61 | -1.69E-46 |
| MS.gene050518 | MS.gene26527 | 0.808893 | 2.48E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene26527 | 0.863549 | 2.30E-64 | -1.69E-46 |
| MS.gene050593 | MS.gene26527 | 0.808964 | 2.39E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene26527 | 0.856723 | 2.65E-62 | -1.69E-46 |
| MS.gene050675 | MS.gene26527 | 0.87661 | 1.22E-68 | -1.69E-46 |
| MS.gene050699 | MS.gene26527 | 0.864918 | 8.60E-65 | -1.69E-46 |
| MS.gene050747 | MS.gene26527 | 0.823832 | 1.12E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene26527 | 0.825116 | 5.59E-54 | -1.69E-46 |
| MS.gene05080 | MS.gene26527 | 0.836802 | 7.56E-57 | -1.69E-46 |
| MS.gene05081 | MS.gene26527 | 0.845733 | 3.38E-59 | -1.69E-46 |
| MS.gene050868 | MS.gene26527 | 0.852437 | 4.62E-61 | -1.69E-46 |
| MS.gene050871 | MS.gene26527 | 0.854647 | 1.07E-61 | -1.69E-46 |
| MS.gene050904 | MS.gene26527 | 0.819242 | 1.29E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene26527 | 0.821381 | 4.16E-53 | -1.69E-46 |
| MS.gene050986 | MS.gene26527 | 0.862041 | 6.71E-64 | -1.69E-46 |
| MS.gene05104 | MS.gene26527 | -0.806487 | 8.03E-50 | -1.69E-46 |
| MS.gene051268 | MS.gene26527 | 0.819537 | 1.10E-52 | -1.69E-46 |
| MS.gene051317 | MS.gene26527 | 0.841112 | 5.79E-58 | -1.69E-46 |
| MS.gene051336 | MS.gene26527 | 0.808472 | 3.05E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene26527 | 0.803682 | 3.10E-49 | -1.69E-46 |
| MS.gene051651 | MS.gene26527 | -0.811345 | 7.33E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene26527 | 0.825895 | 3.65E-54 | -1.69E-46 |
| MS.gene051838 | MS.gene26527 | 0.861015 | 1.38E-63 | -1.69E-46 |
| MS.gene051874 | MS.gene26527 | 0.824237 | 9.00E-54 | -1.69E-46 |
| MS.gene051941 | MS.gene26527 | 0.852449 | 4.58E-61 | -1.69E-46 |
| MS.gene052164 | MS.gene26527 | 0.846399 | 2.23E-59 | -1.69E-46 |
| MS.gene052211 | MS.gene26527 | -0.802667 | 5.03E-49 | -1.69E-46 |
| MS.gene052318 | MS.gene26527 | 0.842564 | 2.39E-58 | -1.69E-46 |
| MS.gene052346 | MS.gene26527 | 0.813859 | 2.07E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene26527 | -0.822202 | 2.69E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene26527 | 0.817054 | 4.02E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene26527 | 0.830008 | 3.74E-55 | -1.69E-46 |
| MS.gene052501 | MS.gene26527 | 0.833769 | 4.41E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene26527 | 0.883058 | 6.19E-71 | -1.69E-46 |
| MS.gene052505 | MS.gene26527 | 0.827731 | 1.33E-54 | -1.69E-46 |
| MS.gene052506 | MS.gene26527 | 0.80732 | 5.35E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene26527 | 0.886742 | 2.62E-72 | -1.69E-46 |
| MS.gene052822 | MS.gene26527 | 0.80758 | 4.72E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene26527 | 0.882934 | 6.87E-71 | -1.69E-46 |
| MS.gene052825 | MS.gene26527 | 0.87692 | 9.51E-69 | -1.69E-46 |
| MS.gene052870 | MS.gene26527 | 0.802249 | 6.14E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene26527 | 0.823698 | 1.20E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene26527 | 0.861831 | 7.78E-64 | -1.69E-46 |
| MS.gene053203 | MS.gene26527 | 0.850098 | 2.11E-60 | -1.69E-46 |
| MS.gene053207 | MS.gene26527 | 0.821837 | 3.26E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene26527 | 0.826097 | 3.27E-54 | -1.69E-46 |
| MS.gene053286 | MS.gene26527 | 0.824542 | 7.63E-54 | -1.69E-46 |
| MS.gene053420 | MS.gene26527 | -0.811017 | 8.64E-51 | -1.69E-46 |
| MS.gene053436 | MS.gene26527 | 0.824154 | 9.41E-54 | -1.69E-46 |
| MS.gene053479 | MS.gene26527 | 0.836776 | 7.67E-57 | -1.69E-46 |
| MS.gene053480 | MS.gene26527 | 0.891359 | 4.27E-74 | -1.69E-46 |
| MS.gene053574 | MS.gene26527 | 0.821624 | 3.66E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene26527 | 0.85407 | 1.57E-61 | -1.69E-46 |
| MS.gene053824 | MS.gene26527 | 0.849286 | 3.57E-60 | -1.69E-46 |
| MS.gene053912 | MS.gene26527 | 0.82235 | 2.48E-53 | -1.69E-46 |
| MS.gene053997 | MS.gene26527 | 0.810025 | 1.41E-50 | -1.69E-46 |
| MS.gene054107 | MS.gene26527 | 0.855533 | 5.92E-62 | -1.69E-46 |
| MS.gene054344 | MS.gene26527 | 0.847457 | 1.14E-59 | -1.69E-46 |
| MS.gene054408 | MS.gene26527 | 0.807738 | 4.36E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene26527 | 0.851419 | 8.99E-61 | -1.69E-46 |
| MS.gene054600 | MS.gene26527 | 0.845737 | 3.37E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene26527 | 0.813081 | 3.07E-51 | -1.69E-46 |
| MS.gene054706 | MS.gene26527 | -0.816928 | 4.29E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene26527 | 0.866112 | 3.62E-65 | -1.69E-46 |
| MS.gene054742 | MS.gene26527 | -0.814663 | 1.37E-51 | -1.69E-46 |
| MS.gene054884 | MS.gene26527 | -0.846444 | 2.16E-59 | -1.69E-46 |
| MS.gene054927 | MS.gene26527 | 0.80001 | 1.76E-48 | -1.69E-46 |
| MS.gene05494 | MS.gene26527 | 0.830899 | 2.26E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene26527 | 0.850484 | 1.65E-60 | -1.69E-46 |
| MS.gene055206 | MS.gene26527 | 0.829316 | 5.51E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene26527 | 0.840844 | 6.81E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene26527 | 0.874827 | 4.98E-68 | -1.69E-46 |
| MS.gene055577 | MS.gene26527 | 0.84938 | 3.36E-60 | -1.69E-46 |
| MS.gene055741 | MS.gene26527 | 0.845022 | 5.26E-59 | -1.69E-46 |
| MS.gene055744 | MS.gene26527 | 0.837477 | 5.08E-57 | -1.69E-46 |
| MS.gene055748 | MS.gene26527 | 0.81812 | 2.31E-52 | -1.69E-46 |
| MS.gene055750 | MS.gene26527 | 0.809426 | 1.90E-50 | -1.69E-46 |
| MS.gene055751 | MS.gene26527 | 0.815527 | 8.83E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene26527 | 0.892942 | 9.97E-75 | -1.69E-46 |
| MS.gene055941 | MS.gene26527 | 0.862503 | 4.84E-64 | -1.69E-46 |
| MS.gene056040 | MS.gene26527 | 0.8078 | 4.24E-50 | -1.69E-46 |
| MS.gene056166 | MS.gene26527 | 0.836991 | 6.76E-57 | -1.69E-46 |
| MS.gene056387 | MS.gene26527 | 0.861747 | 8.25E-64 | -1.69E-46 |
| MS.gene056504 | MS.gene26527 | 0.876878 | 9.83E-69 | -1.69E-46 |
| MS.gene056510 | MS.gene26527 | 0.845943 | 2.96E-59 | -1.69E-46 |
| MS.gene056590 | MS.gene26527 | -0.82272 | 2.04E-53 | -1.69E-46 |
| MS.gene056591 | MS.gene26527 | -0.822915 | 1.83E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene26527 | 0.843199 | 1.62E-58 | -1.69E-46 |
| MS.gene056692 | MS.gene26527 | 0.820829 | 5.58E-53 | -1.69E-46 |
| MS.gene056694 | MS.gene26527 | -0.806194 | 9.26E-50 | -1.69E-46 |
| MS.gene056697 | MS.gene26527 | -0.816009 | 6.90E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene26527 | -0.80269 | 4.98E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene26527 | 0.828522 | 8.58E-55 | -1.69E-46 |
| MS.gene056920 | MS.gene26527 | -0.811398 | 7.14E-51 | -1.69E-46 |
| MS.gene056946 | MS.gene26527 | 0.829941 | 3.88E-55 | -1.69E-46 |
| MS.gene057019 | MS.gene26527 | 0.803722 | 3.04E-49 | -1.69E-46 |
| MS.gene057048 | MS.gene26527 | 0.812253 | 4.65E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene26527 | 0.873986 | 9.61E-68 | -1.69E-46 |
| MS.gene057086 | MS.gene26527 | 0.838433 | 2.88E-57 | -1.69E-46 |
| MS.gene057261 | MS.gene26527 | -0.806105 | 9.67E-50 | -1.69E-46 |
| MS.gene057332 | MS.gene26527 | 0.816075 | 6.67E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene26527 | 0.814181 | 1.76E-51 | -1.69E-46 |
| MS.gene057544 | MS.gene26527 | -0.816017 | 6.87E-52 | -1.69E-46 |
| MS.gene057658 | MS.gene26527 | 0.838008 | 3.71E-57 | -1.69E-46 |
| MS.gene057734 | MS.gene26527 | 0.808156 | 3.56E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene26527 | 0.849683 | 2.76E-60 | -1.69E-46 |
| MS.gene057856 | MS.gene26527 | 0.848328 | 6.57E-60 | -1.69E-46 |
| MS.gene057857 | MS.gene26527 | 0.842599 | 2.34E-58 | -1.69E-46 |
| MS.gene05787 | MS.gene26527 | 0.822132 | 2.79E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene26527 | 0.805149 | 1.53E-49 | -1.69E-46 |
| MS.gene058068 | MS.gene26527 | -0.803783 | 2.96E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene26527 | 0.812534 | 4.04E-51 | -1.69E-46 |
| MS.gene058157 | MS.gene26527 | 0.821225 | 4.52E-53 | -1.69E-46 |
| MS.gene058334 | MS.gene26527 | -0.828418 | 9.09E-55 | -1.69E-46 |
| MS.gene058338 | MS.gene26527 | 0.842843 | 2.02E-58 | -1.69E-46 |
| MS.gene05837 | MS.gene26527 | 0.841201 | 5.49E-58 | -1.69E-46 |
| MS.gene058418 | MS.gene26527 | -0.807542 | 4.80E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene26527 | 0.855839 | 4.82E-62 | -1.69E-46 |
| MS.gene058444 | MS.gene26527 | 0.805589 | 1.24E-49 | -1.69E-46 |
| MS.gene058544 | MS.gene26527 | 0.836977 | 6.82E-57 | -1.69E-46 |
| MS.gene058603 | MS.gene26527 | -0.822369 | 2.46E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene26527 | 0.805854 | 1.09E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene26527 | 0.867554 | 1.26E-65 | -1.69E-46 |
| MS.gene059022 | MS.gene26527 | 0.844826 | 5.94E-59 | -1.69E-46 |
| MS.gene059023 | MS.gene26527 | 0.87826 | 3.24E-69 | -1.69E-46 |
| MS.gene05914 | MS.gene26527 | 0.83241 | 9.61E-56 | -1.69E-46 |
| MS.gene05926 | MS.gene26527 | -0.805775 | 1.13E-49 | -1.69E-46 |
| MS.gene059303 | MS.gene26527 | 0.824436 | 8.08E-54 | -1.69E-46 |
| MS.gene059367 | MS.gene26527 | 0.833748 | 4.46E-56 | -1.69E-46 |
| MS.gene059368 | MS.gene26527 | 0.802123 | 6.51E-49 | -1.69E-46 |
| MS.gene059455 | MS.gene26527 | 0.826207 | 3.08E-54 | -1.69E-46 |
| MS.gene059667 | MS.gene26527 | 0.80531 | 1.42E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene26527 | 0.845813 | 3.21E-59 | -1.69E-46 |
| MS.gene059699 | MS.gene26527 | -0.800572 | 1.35E-48 | -1.69E-46 |
| MS.gene059703 | MS.gene26527 | -0.80719 | 5.70E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene26527 | 0.858044 | 1.08E-62 | -1.69E-46 |
| MS.gene059756 | MS.gene26527 | 0.828418 | 9.09E-55 | -1.69E-46 |
| MS.gene059801 | MS.gene26527 | 0.804338 | 2.27E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene26527 | 0.849059 | 4.12E-60 | -1.69E-46 |
| MS.gene059955 | MS.gene26527 | -0.814304 | 1.65E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene26527 | 0.866901 | 2.03E-65 | -1.69E-46 |
| MS.gene060087 | MS.gene26527 | -0.801208 | 1.00E-48 | -1.69E-46 |
| MS.gene06027 | MS.gene26527 | 0.821487 | 3.93E-53 | -1.69E-46 |
| MS.gene060485 | MS.gene26527 | 0.848098 | 7.61E-60 | -1.69E-46 |
| MS.gene060593 | MS.gene26527 | -0.825607 | 4.27E-54 | -1.69E-46 |
| MS.gene060595 | MS.gene26527 | -0.814574 | 1.44E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene26527 | 0.830675 | 2.57E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene26527 | 0.858639 | 7.18E-63 | -1.69E-46 |
| MS.gene060778 | MS.gene26527 | 0.897064 | 2.02E-76 | -1.69E-46 |
| MS.gene06077 | MS.gene26527 | 0.852391 | 4.76E-61 | -1.69E-46 |
| MS.gene060835 | MS.gene26527 | 0.839357 | 1.66E-57 | -1.69E-46 |
| MS.gene06092 | MS.gene26527 | 0.803711 | 3.06E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene26527 | 0.870362 | 1.55E-66 | -1.69E-46 |
| MS.gene061044 | MS.gene26527 | -0.825286 | 5.09E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene26527 | 0.8206 | 6.30E-53 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26527.t1 | MTR_4g086480 | 97.508 | 321 | 8 | 0 | 1 | 321 | 1 | 321 | 0.0 | 653 |
| MS.gene26527.t1 | MTR_4g086470 | 82.555 | 321 | 55 | 1 | 1 | 321 | 1 | 320 | 0.0 | 540 |
| MS.gene26527.t1 | MTR_4g086510 | 63.551 | 321 | 110 | 3 | 1 | 318 | 1 | 317 | 1.34e-158 | 446 |
| MS.gene26527.t1 | MTR_7g056207 | 62.222 | 315 | 116 | 2 | 10 | 321 | 38 | 352 | 1.68e-152 | 432 |
| MS.gene26527.t1 | MTR_3g450680 | 42.988 | 328 | 176 | 6 | 2 | 319 | 6 | 332 | 6.01e-91 | 275 |
| MS.gene26527.t1 | MTR_5g005850 | 41.033 | 329 | 180 | 8 | 1 | 318 | 3 | 328 | 1.31e-90 | 273 |
| MS.gene26527.t1 | MTR_4g086540 | 43.810 | 315 | 157 | 4 | 4 | 318 | 10 | 304 | 9.12e-90 | 271 |
| MS.gene26527.t1 | MTR_3g101420 | 41.975 | 324 | 172 | 5 | 1 | 318 | 1 | 314 | 1.16e-89 | 271 |
| MS.gene26527.t1 | MTR_1g105020 | 42.988 | 328 | 171 | 9 | 1 | 318 | 1 | 322 | 1.43e-86 | 263 |
| MS.gene26527.t1 | MTR_8g040860 | 42.089 | 316 | 175 | 6 | 11 | 319 | 15 | 329 | 1.79e-83 | 255 |
| MS.gene26527.t1 | MTR_5g005920 | 39.640 | 333 | 185 | 10 | 1 | 319 | 1 | 331 | 3.45e-79 | 244 |
| MS.gene26527.t1 | MTR_5g005900 | 40.244 | 328 | 179 | 8 | 5 | 318 | 2 | 326 | 4.78e-74 | 231 |
| MS.gene26527.t1 | MTR_7g051020 | 39.264 | 326 | 189 | 6 | 1 | 318 | 1 | 325 | 2.25e-72 | 227 |
| MS.gene26527.t1 | MTR_1g104930 | 41.104 | 326 | 180 | 7 | 1 | 318 | 1 | 322 | 4.06e-71 | 223 |
| MS.gene26527.t1 | MTR_1g104933 | 43.841 | 276 | 144 | 6 | 49 | 318 | 46 | 316 | 3.59e-64 | 205 |
| MS.gene26527.t1 | MTR_4g050140 | 33.533 | 334 | 184 | 9 | 5 | 319 | 2 | 316 | 1.46e-51 | 173 |
| MS.gene26527.t1 | MTR_1g012430 | 35.831 | 307 | 181 | 8 | 20 | 319 | 11 | 308 | 5.00e-51 | 171 |
| MS.gene26527.t1 | MTR_1g111280 | 32.895 | 304 | 187 | 5 | 12 | 303 | 26 | 324 | 4.57e-47 | 162 |
| MS.gene26527.t1 | MTR_7g406880 | 32.013 | 303 | 183 | 8 | 19 | 300 | 28 | 328 | 1.58e-42 | 150 |
| MS.gene26527.t1 | MTR_7g107040 | 30.794 | 315 | 205 | 7 | 12 | 318 | 7 | 316 | 1.39e-40 | 144 |
| MS.gene26527.t1 | MTR_1g102160 | 33.460 | 263 | 146 | 7 | 20 | 270 | 19 | 264 | 2.00e-39 | 141 |
| MS.gene26527.t1 | MTR_3g012440 | 30.627 | 271 | 173 | 4 | 62 | 319 | 73 | 341 | 2.26e-38 | 139 |
| MS.gene26527.t1 | MTR_6g464120 | 35.060 | 251 | 152 | 6 | 20 | 263 | 24 | 270 | 4.28e-37 | 139 |
| MS.gene26527.t1 | MTR_6g464320 | 31.650 | 297 | 176 | 11 | 39 | 318 | 39 | 325 | 3.14e-36 | 133 |
| MS.gene26527.t1 | MTR_8g035520 | 30.968 | 310 | 201 | 6 | 20 | 320 | 21 | 326 | 6.31e-36 | 132 |
| MS.gene26527.t1 | MTR_6g065110 | 31.034 | 290 | 177 | 6 | 43 | 318 | 54 | 334 | 7.90e-36 | 132 |
| MS.gene26527.t1 | MTR_6g065120 | 31.864 | 295 | 177 | 6 | 39 | 318 | 50 | 335 | 1.29e-35 | 132 |
| MS.gene26527.t1 | MTR_8g035540 | 32.188 | 320 | 190 | 10 | 20 | 321 | 9 | 319 | 6.87e-35 | 129 |
| MS.gene26527.t1 | MTR_6g065430 | 32.646 | 291 | 178 | 7 | 37 | 318 | 46 | 327 | 1.42e-34 | 129 |
| MS.gene26527.t1 | MTR_1g089310 | 32.540 | 252 | 150 | 8 | 74 | 318 | 102 | 340 | 2.79e-34 | 128 |
| MS.gene26527.t1 | MTR_1g089310 | 32.540 | 252 | 150 | 8 | 74 | 318 | 118 | 356 | 2.82e-34 | 129 |
| MS.gene26527.t1 | MTR_6g065340 | 31.034 | 290 | 169 | 6 | 39 | 318 | 60 | 328 | 9.29e-34 | 127 |
| MS.gene26527.t1 | MTR_6g464280 | 32.028 | 281 | 164 | 9 | 39 | 301 | 38 | 309 | 1.17e-33 | 126 |
| MS.gene26527.t1 | MTR_6g065270 | 31.104 | 299 | 177 | 8 | 39 | 318 | 47 | 335 | 1.84e-33 | 126 |
| MS.gene26527.t1 | MTR_6g065400 | 30.612 | 294 | 181 | 6 | 39 | 318 | 49 | 333 | 2.25e-33 | 125 |
| MS.gene26527.t1 | MTR_6g464510 | 30.744 | 309 | 183 | 10 | 28 | 318 | 31 | 326 | 3.39e-33 | 125 |
| MS.gene26527.t1 | MTR_7g093950 | 30.888 | 259 | 150 | 8 | 74 | 318 | 103 | 346 | 6.27e-33 | 125 |
| MS.gene26527.t1 | MTR_6g065370 | 30.612 | 294 | 181 | 6 | 39 | 318 | 49 | 333 | 4.65e-32 | 122 |
| MS.gene26527.t1 | MTR_1g102170 | 30.272 | 294 | 175 | 9 | 6 | 280 | 22 | 304 | 1.48e-31 | 120 |
| MS.gene26527.t1 | MTR_8g035500 | 30.241 | 291 | 186 | 7 | 39 | 318 | 33 | 317 | 4.68e-31 | 119 |
| MS.gene26527.t1 | MTR_0007s0520 | 29.126 | 309 | 192 | 8 | 26 | 318 | 27 | 324 | 7.20e-31 | 119 |
| MS.gene26527.t1 | MTR_1g082210 | 28.808 | 302 | 181 | 11 | 37 | 318 | 53 | 340 | 1.26e-29 | 115 |
| MS.gene26527.t1 | MTR_6g022710 | 27.863 | 262 | 145 | 11 | 75 | 297 | 158 | 414 | 1.24e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26527.t1 | AT1G47480 | 48.125 | 320 | 153 | 5 | 1 | 318 | 1 | 309 | 3.21e-103 | 305 |
| MS.gene26527.t1 | AT3G48690 | 47.988 | 323 | 159 | 6 | 8 | 321 | 1 | 323 | 4.30e-102 | 303 |
| MS.gene26527.t1 | AT3G48700 | 44.848 | 330 | 162 | 7 | 8 | 320 | 1 | 327 | 1.13e-100 | 299 |
| MS.gene26527.t1 | AT1G19190 | 46.372 | 317 | 162 | 5 | 8 | 319 | 1 | 314 | 4.60e-100 | 297 |
| MS.gene26527.t1 | AT2G03550 | 46.006 | 313 | 164 | 4 | 8 | 318 | 1 | 310 | 1.49e-99 | 296 |
| MS.gene26527.t1 | AT1G49660 | 47.649 | 319 | 161 | 5 | 8 | 320 | 1 | 319 | 3.78e-95 | 285 |
| MS.gene26527.t1 | AT1G49650 | 44.660 | 309 | 164 | 6 | 18 | 320 | 67 | 374 | 5.72e-90 | 273 |
| MS.gene26527.t1 | AT1G49640 | 44.481 | 308 | 158 | 7 | 18 | 318 | 12 | 313 | 8.89e-87 | 263 |
| MS.gene26527.t1 | AT1G68620 | 30.693 | 303 | 193 | 7 | 5 | 300 | 16 | 308 | 3.08e-42 | 149 |
| MS.gene26527.t1 | AT5G16080 | 30.915 | 317 | 191 | 10 | 12 | 314 | 28 | 330 | 1.27e-39 | 142 |
| MS.gene26527.t1 | AT5G06570 | 31.661 | 319 | 205 | 7 | 11 | 318 | 9 | 325 | 3.36e-38 | 138 |
| MS.gene26527.t1 | AT5G06570 | 31.661 | 319 | 205 | 7 | 11 | 318 | 9 | 325 | 3.36e-38 | 138 |
| MS.gene26527.t1 | AT5G06570 | 31.661 | 319 | 205 | 7 | 11 | 318 | 24 | 340 | 5.94e-38 | 138 |
| MS.gene26527.t1 | AT5G06570 | 31.661 | 319 | 205 | 7 | 11 | 318 | 24 | 340 | 5.94e-38 | 138 |
| MS.gene26527.t1 | AT2G45600 | 29.808 | 312 | 196 | 8 | 20 | 319 | 16 | 316 | 5.77e-33 | 124 |
| MS.gene26527.t1 | AT2G45610 | 31.507 | 292 | 182 | 7 | 39 | 318 | 38 | 323 | 5.92e-33 | 124 |
| MS.gene26527.t1 | AT5G27320 | 27.815 | 302 | 187 | 9 | 37 | 320 | 53 | 341 | 5.64e-32 | 122 |
| MS.gene26527.t1 | AT3G05120 | 28.094 | 299 | 182 | 10 | 42 | 320 | 58 | 343 | 6.86e-31 | 119 |
| MS.gene26527.t1 | AT5G23530 | 29.965 | 287 | 184 | 7 | 38 | 318 | 51 | 326 | 2.05e-30 | 117 |
| MS.gene26527.t1 | AT3G63010 | 31.746 | 252 | 152 | 8 | 74 | 318 | 103 | 341 | 7.99e-30 | 117 |
| MS.gene26527.t1 | AT5G62180 | 29.670 | 273 | 168 | 7 | 39 | 296 | 38 | 301 | 9.54e-27 | 107 |
Find 73 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAAAAGATTCATAATTTA+TGG | 0.132943 | 4.1:-23331922 | MS.gene26527:CDS |
| GGTTGGTGGGTGATTGGTTT+TGG | 0.145456 | 4.1:+23332372 | None:intergenic |
| CCTGTTCTTGTTTACATTCA+TGG | 0.188053 | 4.1:-23332340 | MS.gene26527:CDS |
| TGCTGAGATGTTATGTTCTT+TGG | 0.197369 | 4.1:+23332408 | None:intergenic |
| ACTTCACTTGCTAATGTTAT+TGG | 0.227846 | 4.1:-23332256 | MS.gene26527:CDS |
| TCGGGTCGGGAAGGAAAATT+TGG | 0.248520 | 4.1:-23332035 | MS.gene26527:CDS |
| CCACAGGTCATGAAGATTCT+TGG | 0.249527 | 4.1:-23332192 | MS.gene26527:CDS |
| CCCGGCTAATGATCCGGATT+TGG | 0.252548 | 4.1:-23331852 | MS.gene26527:CDS |
| TTGCACACCATTTAAGTATT+CGG | 0.264356 | 4.1:-23332054 | MS.gene26527:CDS |
| CCGGCTAATGATCCGGATTT+GGG | 0.298106 | 4.1:-23331851 | MS.gene26527:CDS |
| CCTGTGGGAACAGGGTGTTC+AGG | 0.298801 | 4.1:+23332208 | None:intergenic |
| TGCACACCATTTAAGTATTC+GGG | 0.314345 | 4.1:-23332053 | MS.gene26527:CDS |
| TTAAGGTAGTTATGGTAGTT+TGG | 0.317173 | 4.1:+23332286 | None:intergenic |
| CTGTGGGAACAGGGTGTTCA+GGG | 0.338171 | 4.1:+23332209 | None:intergenic |
| TCCCGACCCGAATACTTAAA+TGG | 0.338222 | 4.1:+23332047 | None:intergenic |
| GGATAGGGGTTGGTATTATA+AGG | 0.344213 | 4.1:-23331774 | MS.gene26527:CDS |
| ATTCTTGGCTTGCACTCAAA+TGG | 0.347739 | 4.1:-23332177 | MS.gene26527:CDS |
| GCTTCACATGTTGGTGGAAA+TGG | 0.350595 | 4.1:-23332151 | MS.gene26527:CDS |
| TCTTCATGACCTGTGGGAAC+AGG | 0.379458 | 4.1:+23332199 | None:intergenic |
| AGATTGCTTATTTGTGTTGC+TGG | 0.381182 | 4.1:-23331812 | MS.gene26527:CDS |
| TAACAGAGTTAAGGTAGTTA+TGG | 0.382469 | 4.1:+23332278 | None:intergenic |
| TTGGATGGTTTGAAACTTGA+AGG | 0.392629 | 4.1:-23332016 | MS.gene26527:CDS |
| GGTCGTGTTCAGAGACTTGC+AGG | 0.405326 | 4.1:-23332496 | MS.gene26527:CDS |
| TTATGGTAGTTTGGTGAGAA+AGG | 0.405757 | 4.1:+23332295 | None:intergenic |
| CCATGAATGTAAACAAGAAC+AGG | 0.406581 | 4.1:+23332340 | None:intergenic |
| TGATCCGGATTTGGGGAAGT+TGG | 0.425803 | 4.1:-23331843 | MS.gene26527:CDS |
| GATCCGGATTTGGGGAAGTT+GGG | 0.428894 | 4.1:-23331842 | MS.gene26527:CDS |
| CCCAAATCCGGATCATTAGC+CGG | 0.438064 | 4.1:+23331851 | None:intergenic |
| TTCTTGGCTTGCACTCAAAT+GGG | 0.448935 | 4.1:-23332176 | MS.gene26527:CDS |
| CAACCCAACTTCCCCAAATC+CGG | 0.451858 | 4.1:+23331839 | None:intergenic |
| GATTAACCCGGCTAATGATC+CGG | 0.463961 | 4.1:-23331858 | MS.gene26527:CDS |
| CATTAGCCGGGTTAATCAAC+GGG | 0.468907 | 4.1:+23331864 | None:intergenic |
| CTTTGATGAAGGAAACAACT+TGG | 0.469524 | 4.1:+23331636 | None:intergenic |
| ACCATTTAAGTATTCGGGTC+GGG | 0.470145 | 4.1:-23332048 | MS.gene26527:CDS |
| GTTCTTAAATTATACAAAAG+TGG | 0.472355 | 4.1:-23332517 | MS.gene26527:CDS |
| CCAAATCCGGATCATTAGCC+GGG | 0.473736 | 4.1:+23331852 | None:intergenic |
| CAAGTTGTTTCCTTCATCAA+AGG | 0.484994 | 4.1:-23331635 | MS.gene26527:CDS |
| CAAGTGAAGTAACAGAGTTA+AGG | 0.493229 | 4.1:+23332269 | None:intergenic |
| TTCATCGTCGATGGTGGAGG+AGG | 0.507650 | 4.1:+23332561 | None:intergenic |
| CGGGTTAATCAACGGGTCAT+CGG | 0.507916 | 4.1:+23331871 | None:intergenic |
| TACTTCATCGTCGATGGTGG+AGG | 0.523560 | 4.1:+23332558 | None:intergenic |
| AAATAGTTGGGGTGGTGTTG+TGG | 0.524797 | 4.1:-23331738 | MS.gene26527:CDS |
| GATTGCTTATTTGTGTTGCT+GGG | 0.526972 | 4.1:-23331811 | MS.gene26527:CDS |
| TTCATAGGAGGTGATAGTGC+TGG | 0.528280 | 4.1:-23332085 | MS.gene26527:CDS |
| TGGATGGTTTGAAACTTGAA+GGG | 0.541623 | 4.1:-23332015 | MS.gene26527:CDS |
| GTGGAAATGGCTCTGATGAA+TGG | 0.542774 | 4.1:-23332138 | MS.gene26527:CDS |
| TGTTCAGAGACTTGCAGGTA+CGG | 0.552280 | 4.1:-23332491 | MS.gene26527:CDS |
| TTTGCATGTCCAACTACGAA+TGG | 0.552729 | 4.1:-23331896 | MS.gene26527:CDS |
| GGCTACTTCATCGTCGATGG+TGG | 0.554184 | 4.1:+23332555 | None:intergenic |
| CTTCATGACCTGTGGGAACA+GGG | 0.558600 | 4.1:+23332200 | None:intergenic |
| TCATCGGATCCATTCGTAGT+TGG | 0.564890 | 4.1:+23331887 | None:intergenic |
| AACGGCTACTTCATCGTCGA+TGG | 0.565230 | 4.1:+23332552 | None:intergenic |
| CACCATTTAAGTATTCGGGT+CGG | 0.566021 | 4.1:-23332049 | MS.gene26527:CDS |
| GTCGGGAAGGAAAATTTGGA+TGG | 0.567129 | 4.1:-23332031 | MS.gene26527:CDS |
| CCTGAACACCCTGTTCCCAC+AGG | 0.567848 | 4.1:-23332208 | MS.gene26527:CDS |
| ACCGCAGCATTGTCACATGT+TGG | 0.575233 | 4.1:+23331668 | None:intergenic |
| AAATGGGTTGCTTCACATGT+TGG | 0.579541 | 4.1:-23332160 | MS.gene26527:CDS |
| TCATTAGCCGGGTTAATCAA+CGG | 0.581749 | 4.1:+23331863 | None:intergenic |
| AAGAACTGGGGTTAGATCAA+CGG | 0.586206 | 4.1:+23332534 | None:intergenic |
| CCAAGAATCTTCATGACCTG+TGG | 0.586890 | 4.1:+23332192 | None:intergenic |
| TGTGGGAACAGGGTGTTCAG+GGG | 0.589713 | 4.1:+23332210 | None:intergenic |
| TTTAAGTATTCGGGTCGGGA+AGG | 0.597599 | 4.1:-23332044 | MS.gene26527:CDS |
| AACATCTTTAGATTCAACGT+TGG | 0.601272 | 4.1:+23332438 | None:intergenic |
| CGATGACCCGTTGATTAACC+CGG | 0.602163 | 4.1:-23331870 | MS.gene26527:CDS |
| GGTGGAGGAGGTTGAATCCA+TGG | 0.605959 | 4.1:+23332573 | None:intergenic |
| CAAGAATCTTCATGACCTGT+GGG | 0.606763 | 4.1:+23332193 | None:intergenic |
| TGTGGAAGTGATTGAAACAG+AGG | 0.609748 | 4.1:-23331720 | MS.gene26527:CDS |
| TTTGTATAATTTAAGAACTG+GGG | 0.616246 | 4.1:+23332522 | None:intergenic |
| TGGGTTGCTTCACATGTTGG+TGG | 0.616285 | 4.1:-23332157 | MS.gene26527:CDS |
| CGGCTAATGATCCGGATTTG+GGG | 0.633862 | 4.1:-23331850 | MS.gene26527:CDS |
| ACCAACATGTGACAATGCTG+CGG | 0.661762 | 4.1:-23331669 | MS.gene26527:CDS |
| GTTCTTGTTTACATTCATGG+TGG | 0.662192 | 4.1:-23332337 | MS.gene26527:CDS |
| CATGAATGTAAACAAGAACA+GGG | 0.675441 | 4.1:+23332341 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGAAAAGATTCATAATTTA+TGG | - | chr4.1:23332277-23332296 | MS.gene26527:CDS | 15.0% |
| !!! | TTATATTCATCCTTATTTTT+GGG | - | chr4.1:23332212-23332231 | MS.gene26527:CDS | 15.0% |
| !!! | TTTATATTCATCCTTATTTT+TGG | - | chr4.1:23332211-23332230 | MS.gene26527:CDS | 15.0% |
| !!! | TTTTGTATAATTTAAGAACT+GGG | + | chr4.1:23331681-23331700 | None:intergenic | 15.0% |
| !! | GTTCTTAAATTATACAAAAG+TGG | - | chr4.1:23331682-23331701 | MS.gene26527:CDS | 20.0% |
| !! | TTTGTATAATTTAAGAACTG+GGG | + | chr4.1:23331680-23331699 | None:intergenic | 20.0% |
| !!! | CTTTTGTATAATTTAAGAAC+TGG | + | chr4.1:23331682-23331701 | None:intergenic | 20.0% |
| !!! | TATATTCATCCTTATTTTTG+GGG | - | chr4.1:23332213-23332232 | MS.gene26527:CDS | 20.0% |
| ! | AATTGCTTGAGAAAAATAGT+TGG | - | chr4.1:23332448-23332467 | MS.gene26527:CDS | 25.0% |
| ! | ATTGCTTGAGAAAAATAGTT+GGG | - | chr4.1:23332449-23332468 | MS.gene26527:CDS | 25.0% |
| !!! | GATTTTGAGAAAGTTTTCAT+AGG | - | chr4.1:23332099-23332118 | MS.gene26527:CDS | 25.0% |
| AACATCTTTAGATTCAACGT+TGG | + | chr4.1:23331764-23331783 | None:intergenic | 30.0% | |
| CATGAATGTAAACAAGAACA+GGG | + | chr4.1:23331861-23331880 | None:intergenic | 30.0% | |
| TAACAGAGTTAAGGTAGTTA+TGG | + | chr4.1:23331924-23331943 | None:intergenic | 30.0% | |
| TTAAGGTAGTTATGGTAGTT+TGG | + | chr4.1:23331916-23331935 | None:intergenic | 30.0% | |
| TTGCACACCATTTAAGTATT+CGG | - | chr4.1:23332145-23332164 | MS.gene26527:CDS | 30.0% | |
| TTGCTTGAGAAAAATAGTTG+GGG | - | chr4.1:23332450-23332469 | MS.gene26527:CDS | 30.0% | |
| ! | ACTTCACTTGCTAATGTTAT+TGG | - | chr4.1:23331943-23331962 | MS.gene26527:CDS | 30.0% |
| ! | TTTGAGAAAGTTTTCATAGG+AGG | - | chr4.1:23332102-23332121 | MS.gene26527:CDS | 30.0% |
| !! | CAAGATATTTTGAAGGATAG+GGG | - | chr4.1:23332411-23332430 | MS.gene26527:CDS | 30.0% |
| !! | GCAAGATATTTTGAAGGATA+GGG | - | chr4.1:23332410-23332429 | MS.gene26527:CDS | 30.0% |
| !!! | TTAGATTCAACGTTGGTTTT+AGG | + | chr4.1:23331757-23331776 | None:intergenic | 30.0% |
| AGATTGCTTATTTGTGTTGC+TGG | - | chr4.1:23332387-23332406 | MS.gene26527:CDS | 35.0% | |
| CAAGTGAAGTAACAGAGTTA+AGG | + | chr4.1:23331933-23331952 | None:intergenic | 35.0% | |
| CCATGAATGTAAACAAGAAC+AGG | + | chr4.1:23331862-23331881 | None:intergenic | 35.0% | |
| CTTTGATGAAGGAAACAACT+TGG | + | chr4.1:23332566-23332585 | None:intergenic | 35.0% | |
| TGCACACCATTTAAGTATTC+GGG | - | chr4.1:23332146-23332165 | MS.gene26527:CDS | 35.0% | |
| TGCTGAGATGTTATGTTCTT+TGG | + | chr4.1:23331794-23331813 | None:intergenic | 35.0% | |
| ! | AAACAAGAACAGGGAGTTTT+TGG | + | chr4.1:23331852-23331871 | None:intergenic | 35.0% |
| ! | AACAAGAACAGGGAGTTTTT+GGG | + | chr4.1:23331851-23331870 | None:intergenic | 35.0% |
| ! | CAAGTTGTTTCCTTCATCAA+AGG | - | chr4.1:23332564-23332583 | MS.gene26527:CDS | 35.0% |
| ! | CCTGTTCTTGTTTACATTCA+TGG | - | chr4.1:23331859-23331878 | MS.gene26527:CDS | 35.0% |
| ! | GATTGCTTATTTGTGTTGCT+GGG | - | chr4.1:23332388-23332407 | MS.gene26527:CDS | 35.0% |
| ! | GTTCTTGTTTACATTCATGG+TGG | - | chr4.1:23331862-23331881 | MS.gene26527:CDS | 35.0% |
| ! | TGGATGGTTTGAAACTTGAA+GGG | - | chr4.1:23332184-23332203 | MS.gene26527:CDS | 35.0% |
| ! | TTATGGTAGTTTGGTGAGAA+AGG | + | chr4.1:23331907-23331926 | None:intergenic | 35.0% |
| ! | TTGGATGGTTTGAAACTTGA+AGG | - | chr4.1:23332183-23332202 | MS.gene26527:CDS | 35.0% |
| !! | ATATTTTGAAGGATAGGGGT+TGG | - | chr4.1:23332415-23332434 | MS.gene26527:CDS | 35.0% |
| !! | GGCAAGATATTTTGAAGGAT+AGG | - | chr4.1:23332409-23332428 | MS.gene26527:CDS | 35.0% |
| !!! | TTGGTTTTAGGATCAAGAGA+TGG | + | chr4.1:23331745-23331764 | None:intergenic | 35.0% |
| AAGAACTGGGGTTAGATCAA+CGG | + | chr4.1:23331668-23331687 | None:intergenic | 40.0% | |
| ACCATTTAAGTATTCGGGTC+GGG | - | chr4.1:23332151-23332170 | MS.gene26527:CDS | 40.0% | |
| CAAGAATCTTCATGACCTGT+GGG | + | chr4.1:23332009-23332028 | None:intergenic | 40.0% | |
| CACCATTTAAGTATTCGGGT+CGG | - | chr4.1:23332150-23332169 | MS.gene26527:CDS | 40.0% | |
| CGATCTACACCCCAAAAATA+AGG | + | chr4.1:23332225-23332244 | None:intergenic | 40.0% | |
| CTTGAGAAAAATAGTTGGGG+TGG | - | chr4.1:23332453-23332472 | MS.gene26527:CDS | 40.0% | |
| TCATTAGCCGGGTTAATCAA+CGG | + | chr4.1:23332339-23332358 | None:intergenic | 40.0% | |
| TGTGGAAGTGATTGAAACAG+AGG | - | chr4.1:23332479-23332498 | MS.gene26527:CDS | 40.0% | |
| TTTGCATGTCCAACTACGAA+TGG | - | chr4.1:23332303-23332322 | MS.gene26527:CDS | 40.0% | |
| !! | AAATGGGTTGCTTCACATGT+TGG | - | chr4.1:23332039-23332058 | MS.gene26527:CDS | 40.0% |
| !! | ATTCTTGGCTTGCACTCAAA+TGG | - | chr4.1:23332022-23332041 | MS.gene26527:CDS | 40.0% |
| !! | GGATAGGGGTTGGTATTATA+AGG | - | chr4.1:23332425-23332444 | MS.gene26527:CDS | 40.0% |
| !! | TGCTGGGCAAGATATTTTGA+AGG | - | chr4.1:23332404-23332423 | MS.gene26527:CDS | 40.0% |
| !! | TTCTTGGCTTGCACTCAAAT+GGG | - | chr4.1:23332023-23332042 | MS.gene26527:CDS | 40.0% |
| !!! | GTTTTAGGATCAAGAGATGG+AGG | + | chr4.1:23331742-23331761 | None:intergenic | 40.0% |
| !!! | TTTTGGGGTGTAGATCGAAT+TGG | - | chr4.1:23332228-23332247 | MS.gene26527:CDS | 40.0% |
| ACCAACATGTGACAATGCTG+CGG | - | chr4.1:23332530-23332549 | MS.gene26527:CDS | 45.0% | |
| CATTAGCCGGGTTAATCAAC+GGG | + | chr4.1:23332338-23332357 | None:intergenic | 45.0% | |
| CCAAGAATCTTCATGACCTG+TGG | + | chr4.1:23332010-23332029 | None:intergenic | 45.0% | |
| CCACAGGTCATGAAGATTCT+TGG | - | chr4.1:23332007-23332026 | MS.gene26527:CDS | 45.0% | |
| GATTAACCCGGCTAATGATC+CGG | - | chr4.1:23332341-23332360 | MS.gene26527:CDS | 45.0% | |
| GTCGGGAAGGAAAATTTGGA+TGG | - | chr4.1:23332168-23332187 | MS.gene26527:CDS | 45.0% | |
| TCATCGGATCCATTCGTAGT+TGG | + | chr4.1:23332315-23332334 | None:intergenic | 45.0% | |
| TCCCGACCCGAATACTTAAA+TGG | + | chr4.1:23332155-23332174 | None:intergenic | 45.0% | |
| TGTTCAGAGACTTGCAGGTA+CGG | - | chr4.1:23331708-23331727 | MS.gene26527:CDS | 45.0% | |
| TTTAAGTATTCGGGTCGGGA+AGG | - | chr4.1:23332155-23332174 | MS.gene26527:CDS | 45.0% | |
| ! | AAATAGTTGGGGTGGTGTTG+TGG | - | chr4.1:23332461-23332480 | MS.gene26527:CDS | 45.0% |
| ! | GCTTCACATGTTGGTGGAAA+TGG | - | chr4.1:23332048-23332067 | MS.gene26527:CDS | 45.0% |
| ! | TTCATAGGAGGTGATAGTGC+TGG | - | chr4.1:23332114-23332133 | MS.gene26527:CDS | 45.0% |
| !! | GTGGAAATGGCTCTGATGAA+TGG | - | chr4.1:23332061-23332080 | MS.gene26527:CDS | 45.0% |
| !!! | AGAACAGGGAGTTTTTGGGT+TGG | + | chr4.1:23331847-23331866 | None:intergenic | 45.0% |
| !!! | GTTGGTGGGTGATTGGTTTT+GGG | + | chr4.1:23331829-23331848 | None:intergenic | 45.0% |
| !!! | TTTTTGGGTTGGTGGGTGAT+TGG | + | chr4.1:23331836-23331855 | None:intergenic | 45.0% |
| AACGGCTACTTCATCGTCGA+TGG | + | chr4.1:23331650-23331669 | None:intergenic | 50.0% | |
| ACCGCAGCATTGTCACATGT+TGG | + | chr4.1:23332534-23332553 | None:intergenic | 50.0% | |
| CAACCCAACTTCCCCAAATC+CGG | + | chr4.1:23332363-23332382 | None:intergenic | 50.0% | |
| CCAAATCCGGATCATTAGCC+GGG | + | chr4.1:23332350-23332369 | None:intergenic | 50.0% | |
| CCCAAATCCGGATCATTAGC+CGG | + | chr4.1:23332351-23332370 | None:intergenic | 50.0% | |
| CCGGCTAATGATCCGGATTT+GGG | - | chr4.1:23332348-23332367 | MS.gene26527:CDS | 50.0% | |
| CGGCTAATGATCCGGATTTG+GGG | - | chr4.1:23332349-23332368 | MS.gene26527:CDS | 50.0% | |
| CGGGTTAATCAACGGGTCAT+CGG | + | chr4.1:23332331-23332350 | None:intergenic | 50.0% | |
| CTTCATGACCTGTGGGAACA+GGG | + | chr4.1:23332002-23332021 | None:intergenic | 50.0% | |
| GATCCGGATTTGGGGAAGTT+GGG | - | chr4.1:23332357-23332376 | MS.gene26527:CDS | 50.0% | |
| TCGGGTCGGGAAGGAAAATT+TGG | - | chr4.1:23332164-23332183 | MS.gene26527:CDS | 50.0% | |
| TCTTCATGACCTGTGGGAAC+AGG | + | chr4.1:23332003-23332022 | None:intergenic | 50.0% | |
| TGATCCGGATTTGGGGAAGT+TGG | - | chr4.1:23332356-23332375 | MS.gene26527:CDS | 50.0% | |
| TGGGTTGCTTCACATGTTGG+TGG | - | chr4.1:23332042-23332061 | MS.gene26527:CDS | 50.0% | |
| ! | CGATGACCCGTTGATTAACC+CGG | - | chr4.1:23332329-23332348 | MS.gene26527:CDS | 50.0% |
| ! | TACTTCATCGTCGATGGTGG+AGG | + | chr4.1:23331644-23331663 | None:intergenic | 50.0% |
| !!! | ACAGGGAGTTTTTGGGTTGG+TGG | + | chr4.1:23331844-23331863 | None:intergenic | 50.0% |
| !!! | CAGGGAGTTTTTGGGTTGGT+GGG | + | chr4.1:23331843-23331862 | None:intergenic | 50.0% |
| !!! | GGTTGGTGGGTGATTGGTTT+TGG | + | chr4.1:23331830-23331849 | None:intergenic | 50.0% |
| CCCGGCTAATGATCCGGATT+TGG | - | chr4.1:23332347-23332366 | MS.gene26527:CDS | 55.0% | |
| GGCTACTTCATCGTCGATGG+TGG | + | chr4.1:23331647-23331666 | None:intergenic | 55.0% | |
| GGTCGTGTTCAGAGACTTGC+AGG | - | chr4.1:23331703-23331722 | MS.gene26527:CDS | 55.0% | |
| ! | CTGTGGGAACAGGGTGTTCA+GGG | + | chr4.1:23331993-23332012 | None:intergenic | 55.0% |
| ! | TGTGGGAACAGGGTGTTCAG+GGG | + | chr4.1:23331992-23332011 | None:intergenic | 55.0% |
| !! | TTCATCGTCGATGGTGGAGG+AGG | + | chr4.1:23331641-23331660 | None:intergenic | 55.0% |
| CCTGAACACCCTGTTCCCAC+AGG | - | chr4.1:23331991-23332010 | MS.gene26527:CDS | 60.0% | |
| ! | CCTGTGGGAACAGGGTGTTC+AGG | + | chr4.1:23331994-23332013 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 23331628 | 23332593 | 23331628 | ID=MS.gene26527 |
| chr4.1 | mRNA | 23331628 | 23332593 | 23331628 | ID=MS.gene26527.t1;Parent=MS.gene26527 |
| chr4.1 | exon | 23331628 | 23332593 | 23331628 | ID=MS.gene26527.t1.exon1;Parent=MS.gene26527.t1 |
| chr4.1 | CDS | 23331628 | 23332593 | 23331628 | ID=cds.MS.gene26527.t1;Parent=MS.gene26527.t1 |
| Gene Sequence |
| Protein sequence |
