Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39628.t1 | AES90204.1 | 97.8 | 321 | 7 | 0 | 1 | 321 | 1 | 321 | 4.70E-189 | 670.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39628.t1 | Q9SMN0 | 49.1 | 322 | 155 | 6 | 8 | 320 | 1 | 322 | 8.6e-91 | 335.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39628.t1 | G7JMF0 | 97.8 | 321 | 7 | 0 | 1 | 321 | 1 | 321 | 3.4e-189 | 670.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene39628 | 0.859338 | 4.43E-63 | -1.69E-46 |
| MS.gene049217 | MS.gene39628 | 0.815933 | 7.17E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene39628 | 0.855033 | 8.27E-62 | -1.69E-46 |
| MS.gene049232 | MS.gene39628 | 0.823252 | 1.53E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene39628 | 0.868725 | 5.27E-66 | -1.69E-46 |
| MS.gene049320 | MS.gene39628 | 0.862541 | 4.71E-64 | -1.69E-46 |
| MS.gene049396 | MS.gene39628 | 0.804285 | 2.33E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene39628 | 0.839146 | 1.89E-57 | -1.69E-46 |
| MS.gene049611 | MS.gene39628 | -0.804425 | 2.17E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene39628 | 0.872123 | 4.05E-67 | -1.69E-46 |
| MS.gene05010 | MS.gene39628 | 0.840495 | 8.40E-58 | -1.69E-46 |
| MS.gene050163 | MS.gene39628 | 0.812495 | 4.12E-51 | -1.69E-46 |
| MS.gene050165 | MS.gene39628 | 0.816854 | 4.46E-52 | -1.69E-46 |
| MS.gene050170 | MS.gene39628 | 0.874249 | 7.83E-68 | -1.69E-46 |
| MS.gene050216 | MS.gene39628 | 0.811083 | 8.36E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene39628 | 0.856208 | 3.76E-62 | -1.69E-46 |
| MS.gene050333 | MS.gene39628 | 0.815129 | 1.08E-51 | -1.69E-46 |
| MS.gene050444 | MS.gene39628 | 0.842725 | 2.17E-58 | -1.69E-46 |
| MS.gene050496 | MS.gene39628 | 0.871293 | 7.63E-67 | -1.69E-46 |
| MS.gene050504 | MS.gene39628 | 0.857794 | 1.28E-62 | -1.69E-46 |
| MS.gene050518 | MS.gene39628 | 0.838203 | 3.31E-57 | -1.69E-46 |
| MS.gene050538 | MS.gene39628 | 0.811514 | 6.74E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene39628 | 0.822891 | 1.86E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene39628 | 0.873438 | 1.47E-67 | -1.69E-46 |
| MS.gene050675 | MS.gene39628 | 0.862928 | 3.58E-64 | -1.69E-46 |
| MS.gene050699 | MS.gene39628 | 0.846043 | 2.78E-59 | -1.69E-46 |
| MS.gene050747 | MS.gene39628 | 0.832335 | 1.00E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene39628 | 0.870409 | 1.49E-66 | -1.69E-46 |
| MS.gene05080 | MS.gene39628 | 0.881865 | 1.68E-70 | -1.69E-46 |
| MS.gene05081 | MS.gene39628 | 0.817325 | 3.50E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene39628 | 0.885766 | 6.13E-72 | -1.69E-46 |
| MS.gene050871 | MS.gene39628 | 0.885018 | 1.17E-71 | -1.69E-46 |
| MS.gene050876 | MS.gene39628 | 0.810677 | 1.02E-50 | -1.69E-46 |
| MS.gene050904 | MS.gene39628 | 0.836257 | 1.04E-56 | -1.69E-46 |
| MS.gene050950 | MS.gene39628 | 0.83358 | 4.91E-56 | -1.69E-46 |
| MS.gene050986 | MS.gene39628 | 0.839099 | 1.94E-57 | -1.69E-46 |
| MS.gene051138 | MS.gene39628 | -0.804556 | 2.04E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene39628 | 0.809059 | 2.28E-50 | -1.69E-46 |
| MS.gene051268 | MS.gene39628 | 0.882351 | 1.12E-70 | -1.69E-46 |
| MS.gene051317 | MS.gene39628 | 0.842527 | 2.45E-58 | -1.69E-46 |
| MS.gene051551 | MS.gene39628 | 0.814806 | 1.28E-51 | -1.69E-46 |
| MS.gene051617 | MS.gene39628 | 0.815974 | 7.02E-52 | -1.69E-46 |
| MS.gene051651 | MS.gene39628 | -0.808799 | 2.59E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene39628 | 0.845606 | 3.66E-59 | -1.69E-46 |
| MS.gene051838 | MS.gene39628 | 0.847292 | 1.27E-59 | -1.69E-46 |
| MS.gene051858 | MS.gene39628 | 0.831839 | 1.33E-55 | -1.69E-46 |
| MS.gene051874 | MS.gene39628 | 0.839686 | 1.37E-57 | -1.69E-46 |
| MS.gene051941 | MS.gene39628 | 0.814331 | 1.63E-51 | -1.69E-46 |
| MS.gene051949 | MS.gene39628 | 0.844509 | 7.23E-59 | -1.69E-46 |
| MS.gene052129 | MS.gene39628 | -0.812904 | 3.35E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene39628 | 0.840526 | 8.25E-58 | -1.69E-46 |
| MS.gene052482 | MS.gene39628 | 0.803404 | 3.54E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene39628 | 0.804778 | 1.83E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene39628 | 0.815489 | 9.01E-52 | -1.69E-46 |
| MS.gene052506 | MS.gene39628 | 0.826351 | 2.85E-54 | -1.69E-46 |
| MS.gene052615 | MS.gene39628 | 0.821498 | 3.91E-53 | -1.69E-46 |
| MS.gene052822 | MS.gene39628 | 0.843719 | 1.18E-58 | -1.69E-46 |
| MS.gene052823 | MS.gene39628 | 0.810289 | 1.24E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene39628 | 0.80595 | 1.04E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene39628 | 0.885711 | 6.42E-72 | -1.69E-46 |
| MS.gene052872 | MS.gene39628 | 0.895593 | 8.27E-76 | -1.69E-46 |
| MS.gene052916 | MS.gene39628 | 0.80229 | 6.02E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene39628 | 0.841247 | 5.33E-58 | -1.69E-46 |
| MS.gene053009 | MS.gene39628 | 0.821085 | 4.87E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene39628 | 0.843519 | 1.33E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene39628 | 0.819525 | 1.11E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene39628 | 0.827122 | 1.86E-54 | -1.69E-46 |
| MS.gene053286 | MS.gene39628 | 0.83059 | 2.70E-55 | -1.69E-46 |
| MS.gene053420 | MS.gene39628 | -0.807106 | 5.94E-50 | -1.69E-46 |
| MS.gene053479 | MS.gene39628 | 0.901723 | 2.01E-78 | -1.69E-46 |
| MS.gene053480 | MS.gene39628 | 0.831946 | 1.25E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene39628 | 0.851313 | 9.63E-61 | -1.69E-46 |
| MS.gene053626 | MS.gene39628 | 0.810838 | 9.45E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene39628 | 0.840029 | 1.11E-57 | -1.69E-46 |
| MS.gene053824 | MS.gene39628 | 0.889972 | 1.50E-73 | -1.69E-46 |
| MS.gene053916 | MS.gene39628 | 0.873067 | 1.96E-67 | -1.69E-46 |
| MS.gene054408 | MS.gene39628 | 0.815767 | 7.81E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene39628 | 0.822527 | 2.26E-53 | -1.69E-46 |
| MS.gene054600 | MS.gene39628 | 0.852627 | 4.08E-61 | -1.69E-46 |
| MS.gene054642 | MS.gene39628 | 0.847944 | 8.39E-60 | -1.69E-46 |
| MS.gene05470 | MS.gene39628 | 0.839924 | 1.18E-57 | -1.69E-46 |
| MS.gene05494 | MS.gene39628 | 0.894503 | 2.32E-75 | -1.69E-46 |
| MS.gene054954 | MS.gene39628 | 0.867639 | 1.18E-65 | -1.69E-46 |
| MS.gene05505 | MS.gene39628 | 0.821879 | 3.19E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene39628 | 0.825947 | 3.55E-54 | -1.69E-46 |
| MS.gene055224 | MS.gene39628 | 0.843796 | 1.12E-58 | -1.69E-46 |
| MS.gene055289 | MS.gene39628 | 0.804099 | 2.54E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene39628 | 0.856931 | 2.30E-62 | -1.69E-46 |
| MS.gene055502 | MS.gene39628 | 0.847802 | 9.18E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene39628 | 0.874427 | 6.81E-68 | -1.69E-46 |
| MS.gene055722 | MS.gene39628 | 0.848604 | 5.51E-60 | -1.69E-46 |
| MS.gene055748 | MS.gene39628 | 0.871687 | 5.65E-67 | -1.69E-46 |
| MS.gene055750 | MS.gene39628 | 0.860972 | 1.42E-63 | -1.69E-46 |
| MS.gene055751 | MS.gene39628 | 0.878915 | 1.91E-69 | -1.69E-46 |
| MS.gene055776 | MS.gene39628 | 0.85649 | 3.11E-62 | -1.69E-46 |
| MS.gene05589 | MS.gene39628 | 0.867632 | 1.19E-65 | -1.69E-46 |
| MS.gene05592 | MS.gene39628 | 0.807566 | 4.75E-50 | -1.69E-46 |
| MS.gene055941 | MS.gene39628 | 0.827236 | 1.75E-54 | -1.69E-46 |
| MS.gene056046 | MS.gene39628 | 0.802853 | 4.61E-49 | -1.69E-46 |
| MS.gene056283 | MS.gene39628 | 0.801596 | 8.36E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene39628 | 0.852634 | 4.06E-61 | -1.69E-46 |
| MS.gene056446 | MS.gene39628 | 0.832039 | 1.19E-55 | -1.69E-46 |
| MS.gene056449 | MS.gene39628 | 0.830522 | 2.80E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene39628 | 0.871458 | 6.73E-67 | -1.69E-46 |
| MS.gene056510 | MS.gene39628 | 0.8643 | 1.34E-64 | -1.69E-46 |
| MS.gene056657 | MS.gene39628 | 0.860417 | 2.10E-63 | -1.69E-46 |
| MS.gene05666 | MS.gene39628 | 0.801592 | 8.37E-49 | -1.69E-46 |
| MS.gene056692 | MS.gene39628 | 0.805441 | 1.33E-49 | -1.69E-46 |
| MS.gene056856 | MS.gene39628 | -0.802699 | 4.96E-49 | -1.69E-46 |
| MS.gene056947 | MS.gene39628 | 0.855295 | 6.95E-62 | -1.69E-46 |
| MS.gene057076 | MS.gene39628 | 0.858135 | 1.01E-62 | -1.69E-46 |
| MS.gene057331 | MS.gene39628 | 0.821602 | 3.70E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene39628 | 0.801446 | 8.97E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene39628 | 0.813842 | 2.09E-51 | -1.69E-46 |
| MS.gene057734 | MS.gene39628 | 0.8096 | 1.75E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene39628 | 0.822391 | 2.43E-53 | -1.69E-46 |
| MS.gene057857 | MS.gene39628 | 0.814367 | 1.60E-51 | -1.69E-46 |
| MS.gene05787 | MS.gene39628 | 0.822601 | 2.17E-53 | -1.69E-46 |
| MS.gene057926 | MS.gene39628 | 0.800714 | 1.27E-48 | -1.69E-46 |
| MS.gene058130 | MS.gene39628 | 0.863165 | 3.02E-64 | -1.69E-46 |
| MS.gene058338 | MS.gene39628 | 0.843037 | 1.79E-58 | -1.69E-46 |
| MS.gene05837 | MS.gene39628 | 0.856464 | 3.16E-62 | -1.69E-46 |
| MS.gene058419 | MS.gene39628 | 0.856418 | 3.26E-62 | -1.69E-46 |
| MS.gene058544 | MS.gene39628 | 0.83056 | 2.74E-55 | -1.69E-46 |
| MS.gene058723 | MS.gene39628 | 0.885046 | 1.14E-71 | -1.69E-46 |
| MS.gene058773 | MS.gene39628 | 0.879625 | 1.07E-69 | -1.69E-46 |
| MS.gene058838 | MS.gene39628 | 0.833934 | 4.01E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene39628 | 0.866956 | 1.95E-65 | -1.69E-46 |
| MS.gene059023 | MS.gene39628 | 0.882838 | 7.45E-71 | -1.69E-46 |
| MS.gene05913 | MS.gene39628 | 0.857424 | 1.65E-62 | -1.69E-46 |
| MS.gene059305 | MS.gene39628 | 0.816426 | 5.56E-52 | -1.69E-46 |
| MS.gene059667 | MS.gene39628 | 0.828932 | 6.83E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene39628 | 0.865191 | 7.06E-65 | -1.69E-46 |
| MS.gene059699 | MS.gene39628 | -0.818209 | 2.21E-52 | -1.69E-46 |
| MS.gene059703 | MS.gene39628 | -0.814152 | 1.78E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene39628 | 0.85981 | 3.20E-63 | -1.69E-46 |
| MS.gene059756 | MS.gene39628 | 0.822199 | 2.69E-53 | -1.69E-46 |
| MS.gene059837 | MS.gene39628 | 0.800381 | 1.48E-48 | -1.69E-46 |
| MS.gene059865 | MS.gene39628 | 0.868338 | 7.03E-66 | -1.69E-46 |
| MS.gene059902 | MS.gene39628 | 0.826375 | 2.81E-54 | -1.69E-46 |
| MS.gene06000 | MS.gene39628 | 0.846242 | 2.46E-59 | -1.69E-46 |
| MS.gene060703 | MS.gene39628 | 0.829602 | 4.70E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene39628 | 0.861654 | 8.82E-64 | -1.69E-46 |
| MS.gene060778 | MS.gene39628 | 0.840007 | 1.13E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene39628 | 0.838047 | 3.63E-57 | -1.69E-46 |
| MS.gene060835 | MS.gene39628 | 0.805898 | 1.07E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene39628 | 0.816993 | 4.15E-52 | -1.69E-46 |
| MS.gene06097 | MS.gene39628 | 0.81965 | 1.04E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene39628 | 0.869279 | 3.49E-66 | -1.69E-46 |
| MS.gene06111 | MS.gene39628 | 0.805282 | 1.44E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene39628 | 0.824359 | 8.42E-54 | -1.69E-46 |
| MS.gene061218 | MS.gene39628 | 0.807528 | 4.84E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39628.t1 | MTR_4g086480 | 97.819 | 321 | 7 | 0 | 1 | 321 | 1 | 321 | 0.0 | 655 |
| MS.gene39628.t1 | MTR_4g086470 | 81.620 | 321 | 58 | 1 | 1 | 321 | 1 | 320 | 0.0 | 536 |
| MS.gene39628.t1 | MTR_4g086510 | 63.551 | 321 | 110 | 3 | 1 | 318 | 1 | 317 | 1.24e-158 | 446 |
| MS.gene39628.t1 | MTR_7g056207 | 61.905 | 315 | 117 | 2 | 10 | 321 | 38 | 352 | 1.81e-151 | 429 |
| MS.gene39628.t1 | MTR_3g101420 | 43.519 | 324 | 167 | 5 | 1 | 318 | 1 | 314 | 3.73e-92 | 277 |
| MS.gene39628.t1 | MTR_3g450680 | 42.683 | 328 | 177 | 6 | 2 | 319 | 6 | 332 | 1.50e-91 | 276 |
| MS.gene39628.t1 | MTR_4g086540 | 44.127 | 315 | 156 | 4 | 4 | 318 | 10 | 304 | 7.02e-91 | 274 |
| MS.gene39628.t1 | MTR_5g005850 | 40.729 | 329 | 181 | 8 | 1 | 318 | 3 | 328 | 2.08e-90 | 273 |
| MS.gene39628.t1 | MTR_1g105020 | 43.598 | 328 | 169 | 9 | 1 | 318 | 1 | 322 | 1.98e-87 | 265 |
| MS.gene39628.t1 | MTR_8g040860 | 42.902 | 317 | 171 | 7 | 11 | 319 | 15 | 329 | 3.48e-84 | 257 |
| MS.gene39628.t1 | MTR_5g005920 | 39.640 | 333 | 185 | 10 | 1 | 319 | 1 | 331 | 2.26e-79 | 245 |
| MS.gene39628.t1 | MTR_5g005900 | 39.939 | 328 | 180 | 8 | 5 | 318 | 2 | 326 | 1.11e-73 | 230 |
| MS.gene39628.t1 | MTR_7g051020 | 38.957 | 326 | 190 | 6 | 1 | 318 | 1 | 325 | 1.68e-72 | 227 |
| MS.gene39628.t1 | MTR_1g104930 | 41.104 | 326 | 180 | 7 | 1 | 318 | 1 | 322 | 3.49e-72 | 226 |
| MS.gene39628.t1 | MTR_1g104933 | 43.841 | 276 | 144 | 6 | 49 | 318 | 46 | 316 | 5.00e-65 | 207 |
| MS.gene39628.t1 | MTR_1g012430 | 36.601 | 306 | 180 | 7 | 20 | 319 | 11 | 308 | 2.21e-52 | 175 |
| MS.gene39628.t1 | MTR_4g050140 | 33.234 | 334 | 185 | 9 | 5 | 319 | 2 | 316 | 3.62e-51 | 172 |
| MS.gene39628.t1 | MTR_1g111280 | 34.138 | 290 | 176 | 4 | 12 | 289 | 26 | 312 | 2.09e-48 | 166 |
| MS.gene39628.t1 | MTR_7g406880 | 32.673 | 303 | 181 | 8 | 19 | 300 | 28 | 328 | 2.28e-44 | 155 |
| MS.gene39628.t1 | MTR_7g107040 | 30.476 | 315 | 206 | 7 | 12 | 318 | 7 | 316 | 5.05e-41 | 145 |
| MS.gene39628.t1 | MTR_1g102160 | 33.333 | 279 | 162 | 7 | 20 | 280 | 19 | 291 | 2.49e-40 | 144 |
| MS.gene39628.t1 | MTR_3g012440 | 30.996 | 271 | 172 | 4 | 62 | 319 | 73 | 341 | 1.26e-38 | 140 |
| MS.gene39628.t1 | MTR_8g035520 | 31.613 | 310 | 199 | 6 | 20 | 320 | 21 | 326 | 4.78e-37 | 135 |
| MS.gene39628.t1 | MTR_6g464320 | 32.215 | 298 | 173 | 11 | 39 | 318 | 39 | 325 | 9.94e-37 | 134 |
| MS.gene39628.t1 | MTR_6g464120 | 35.857 | 251 | 150 | 6 | 20 | 263 | 24 | 270 | 1.56e-36 | 137 |
| MS.gene39628.t1 | MTR_6g065110 | 31.724 | 290 | 175 | 6 | 43 | 318 | 54 | 334 | 2.24e-36 | 134 |
| MS.gene39628.t1 | MTR_6g065120 | 31.864 | 295 | 177 | 6 | 39 | 318 | 50 | 335 | 1.31e-35 | 132 |
| MS.gene39628.t1 | MTR_6g464280 | 34.164 | 281 | 158 | 10 | 39 | 301 | 38 | 309 | 2.03e-35 | 131 |
| MS.gene39628.t1 | MTR_6g065430 | 32.990 | 291 | 177 | 7 | 37 | 318 | 46 | 327 | 4.47e-35 | 130 |
| MS.gene39628.t1 | MTR_6g464510 | 31.715 | 309 | 180 | 10 | 28 | 318 | 31 | 326 | 6.26e-35 | 129 |
| MS.gene39628.t1 | MTR_8g035540 | 31.661 | 319 | 193 | 9 | 20 | 321 | 9 | 319 | 6.45e-35 | 129 |
| MS.gene39628.t1 | MTR_1g089310 | 32.143 | 252 | 151 | 8 | 74 | 318 | 118 | 356 | 3.33e-34 | 128 |
| MS.gene39628.t1 | MTR_1g089310 | 32.143 | 252 | 151 | 8 | 74 | 318 | 102 | 340 | 3.39e-34 | 128 |
| MS.gene39628.t1 | MTR_6g065340 | 31.034 | 290 | 169 | 6 | 39 | 318 | 60 | 328 | 6.66e-34 | 127 |
| MS.gene39628.t1 | MTR_6g065270 | 31.104 | 299 | 177 | 8 | 39 | 318 | 47 | 335 | 9.29e-34 | 127 |
| MS.gene39628.t1 | MTR_0007s0520 | 30.968 | 310 | 185 | 9 | 26 | 318 | 27 | 324 | 1.40e-33 | 126 |
| MS.gene39628.t1 | MTR_6g065400 | 30.612 | 294 | 181 | 6 | 39 | 318 | 49 | 333 | 2.01e-33 | 126 |
| MS.gene39628.t1 | MTR_7g093950 | 29.921 | 254 | 159 | 8 | 74 | 318 | 103 | 346 | 1.97e-32 | 123 |
| MS.gene39628.t1 | MTR_1g102170 | 31.126 | 302 | 174 | 10 | 6 | 288 | 22 | 308 | 2.34e-32 | 123 |
| MS.gene39628.t1 | MTR_6g065370 | 30.612 | 294 | 181 | 6 | 39 | 318 | 49 | 333 | 3.24e-32 | 122 |
| MS.gene39628.t1 | MTR_8g035500 | 30.830 | 253 | 162 | 5 | 39 | 280 | 33 | 283 | 1.28e-31 | 120 |
| MS.gene39628.t1 | MTR_1g082210 | 28.146 | 302 | 183 | 11 | 37 | 318 | 53 | 340 | 7.76e-30 | 116 |
| MS.gene39628.t1 | MTR_6g022710 | 28.244 | 262 | 144 | 11 | 75 | 297 | 158 | 414 | 1.21e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39628.t1 | AT3G48690 | 48.916 | 323 | 156 | 6 | 8 | 321 | 1 | 323 | 3.34e-104 | 308 |
| MS.gene39628.t1 | AT1G47480 | 49.062 | 320 | 150 | 5 | 1 | 318 | 1 | 309 | 2.61e-103 | 305 |
| MS.gene39628.t1 | AT1G19190 | 47.950 | 317 | 157 | 5 | 8 | 319 | 1 | 314 | 6.39e-103 | 305 |
| MS.gene39628.t1 | AT3G48700 | 45.455 | 330 | 160 | 7 | 8 | 320 | 1 | 327 | 2.02e-101 | 301 |
| MS.gene39628.t1 | AT2G03550 | 46.645 | 313 | 162 | 4 | 8 | 318 | 1 | 310 | 3.36e-101 | 300 |
| MS.gene39628.t1 | AT1G49660 | 48.589 | 319 | 158 | 5 | 8 | 320 | 1 | 319 | 1.33e-96 | 288 |
| MS.gene39628.t1 | AT1G49650 | 46.278 | 309 | 159 | 6 | 18 | 320 | 67 | 374 | 1.14e-92 | 280 |
| MS.gene39628.t1 | AT1G49640 | 45.130 | 308 | 156 | 7 | 18 | 318 | 12 | 313 | 1.13e-87 | 266 |
| MS.gene39628.t1 | AT1G68620 | 32.963 | 270 | 169 | 5 | 5 | 267 | 16 | 280 | 1.14e-42 | 150 |
| MS.gene39628.t1 | AT5G16080 | 31.230 | 317 | 190 | 10 | 12 | 314 | 28 | 330 | 7.46e-40 | 143 |
| MS.gene39628.t1 | AT5G06570 | 31.348 | 319 | 206 | 7 | 11 | 318 | 9 | 325 | 1.09e-38 | 139 |
| MS.gene39628.t1 | AT5G06570 | 31.348 | 319 | 206 | 7 | 11 | 318 | 9 | 325 | 1.09e-38 | 139 |
| MS.gene39628.t1 | AT5G06570 | 31.348 | 319 | 206 | 7 | 11 | 318 | 24 | 340 | 1.82e-38 | 139 |
| MS.gene39628.t1 | AT5G06570 | 31.348 | 319 | 206 | 7 | 11 | 318 | 24 | 340 | 1.82e-38 | 139 |
| MS.gene39628.t1 | AT2G45600 | 30.128 | 312 | 195 | 9 | 20 | 319 | 16 | 316 | 9.79e-34 | 126 |
| MS.gene39628.t1 | AT5G27320 | 27.483 | 302 | 188 | 9 | 37 | 320 | 53 | 341 | 2.91e-32 | 123 |
| MS.gene39628.t1 | AT2G45610 | 31.399 | 293 | 181 | 8 | 39 | 318 | 38 | 323 | 6.16e-32 | 121 |
| MS.gene39628.t1 | AT3G05120 | 27.759 | 299 | 183 | 10 | 42 | 320 | 58 | 343 | 4.69e-31 | 120 |
| MS.gene39628.t1 | AT3G63010 | 31.349 | 252 | 153 | 8 | 74 | 318 | 103 | 341 | 1.04e-30 | 119 |
| MS.gene39628.t1 | AT5G23530 | 29.617 | 287 | 185 | 7 | 38 | 318 | 51 | 326 | 7.65e-30 | 116 |
| MS.gene39628.t1 | AT5G62180 | 30.403 | 273 | 166 | 7 | 39 | 296 | 38 | 301 | 1.26e-27 | 110 |
Find 77 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAAAAGATTCATAATTTA+TGG | 0.132943 | 4.2:-24497320 | MS.gene39628:CDS |
| TTGCACACCATTTAAGTATT+AGG | 0.133126 | 4.2:-24497452 | MS.gene39628:CDS |
| TGCTGAGATGTTATGTTCTT+TGG | 0.197369 | 4.2:+24497806 | None:intergenic |
| TAGGGTCGGGAAGGAAAATT+TGG | 0.233536 | 4.2:-24497433 | MS.gene39628:CDS |
| ACTTCACTTGCTAACGTTAT+TGG | 0.243484 | 4.2:-24497654 | MS.gene39628:CDS |
| TGCACACCATTTAAGTATTA+GGG | 0.286010 | 4.2:-24497451 | MS.gene39628:CDS |
| TCCCGACCCTAATACTTAAA+TGG | 0.301022 | 4.2:+24497445 | None:intergenic |
| TTAAGGTAGTTATGGTAGTT+TGG | 0.318136 | 4.2:+24497684 | None:intergenic |
| CTTTCTCAAAATCTGCATAT+TGG | 0.331880 | 4.2:+24497508 | None:intergenic |
| GGATAGGGGTTGGTATTATA+AGG | 0.344213 | 4.2:-24497172 | MS.gene39628:CDS |
| GCTTCACATGTTGGTGGAAA+TGG | 0.361753 | 4.2:-24497549 | MS.gene39628:CDS |
| CCACAGGTCATGAAGATTCA+TGG | 0.368089 | 4.2:-24497590 | MS.gene39628:CDS |
| TTATGGTAGTTTGGCGAGAA+AGG | 0.371989 | 4.2:+24497693 | None:intergenic |
| AGATTGCTTATTTGTGTTGC+TGG | 0.381182 | 4.2:-24497210 | MS.gene39628:CDS |
| TAACAGAGTTAAGGTAGTTA+TGG | 0.382469 | 4.2:+24497676 | None:intergenic |
| CCTCTTCTTGTTTACATCCA+TGG | 0.387855 | 4.2:-24497738 | MS.gene39628:CDS |
| TTGGATGGTTTGAAACTTGA+AGG | 0.392629 | 4.2:-24497414 | MS.gene39628:CDS |
| ATTCATGGCTTGCACTCAAA+TGG | 0.404235 | 4.2:-24497575 | MS.gene39628:CDS |
| GGTCGTGTTCAGAGACTTGC+AGG | 0.405326 | 4.2:-24497894 | MS.gene39628:CDS |
| GATCCGGATTTGAGGAGGTT+GGG | 0.441750 | 4.2:-24497240 | MS.gene39628:CDS |
| CTCAAATCCGGATCATTAGC+CGG | 0.457058 | 4.2:+24497249 | None:intergenic |
| GATTAACCCGGCTAATGATC+CGG | 0.463961 | 4.2:-24497256 | MS.gene39628:CDS |
| ACCATTTAAGTATTAGGGTC+GGG | 0.467849 | 4.2:-24497446 | MS.gene39628:CDS |
| CATTAGCCGGGTTAATCAAC+GGG | 0.468907 | 4.2:+24497262 | None:intergenic |
| CTTTGATGAAGGAAACAACT+TGG | 0.469524 | 4.2:+24497034 | None:intergenic |
| GTTCTTAAATTATACAAAAG+TGG | 0.472355 | 4.2:-24497915 | MS.gene39628:CDS |
| CAACCCAACCTCCTCAAATC+CGG | 0.474254 | 4.2:+24497237 | None:intergenic |
| TCTTCATGACCTGTGGGAAC+AGG | 0.484442 | 4.2:+24497597 | None:intergenic |
| CAAGTTGTTTCCTTCATCAA+AGG | 0.484994 | 4.2:-24497033 | MS.gene39628:CDS |
| AAGGAATTGCTTGAGAAAAG+TGG | 0.485220 | 4.2:-24497153 | MS.gene39628:CDS |
| CCTGTGGGAACAGGATGTTC+CGG | 0.487214 | 4.2:+24497606 | None:intergenic |
| CGGCTAATGATCCGGATTTG+AGG | 0.491618 | 4.2:-24497248 | MS.gene39628:CDS |
| CAAGTGAAGTAACAGAGTTA+AGG | 0.493229 | 4.2:+24497667 | None:intergenic |
| GTGGAAATGGCTCTGATGAA+TGG | 0.498886 | 4.2:-24497536 | MS.gene39628:CDS |
| ATTGCTTGAGAAAAGTGGTT+GGG | 0.500668 | 4.2:-24497148 | MS.gene39628:CDS |
| TGATCCGGATTTGAGGAGGT+TGG | 0.504932 | 4.2:-24497241 | MS.gene39628:CDS |
| TCAAATCCGGATCATTAGCC+GGG | 0.507542 | 4.2:+24497250 | None:intergenic |
| TTCATCGTCGATGGTGGAGG+AGG | 0.507650 | 4.2:+24497959 | None:intergenic |
| CGGGTTAATCAACGGGTCAT+CGG | 0.507916 | 4.2:+24497269 | None:intergenic |
| TTTGAGAAAGTGTTCTTAGG+AGG | 0.509667 | 4.2:-24497495 | MS.gene39628:CDS |
| AAGTGGTTGGGGTGGTGCTG+TGG | 0.512617 | 4.2:-24497136 | MS.gene39628:CDS |
| TTGCTTGAGAAAAGTGGTTG+GGG | 0.513691 | 4.2:-24497147 | MS.gene39628:CDS |
| TACTTCATCGTCGATGGTGG+AGG | 0.523560 | 4.2:+24497956 | None:intergenic |
| GATTGCTTATTTGTGTTGCT+GGG | 0.526972 | 4.2:-24497209 | MS.gene39628:CDS |
| TGGATGGTTTGAAACTTGAA+GGG | 0.541623 | 4.2:-24497413 | MS.gene39628:CDS |
| CACCATTTAAGTATTAGGGT+CGG | 0.549036 | 4.2:-24497447 | MS.gene39628:CDS |
| TGTTCAGAGACTTGCAGGTA+CGG | 0.552280 | 4.2:-24497889 | MS.gene39628:CDS |
| TTTGCATGTCCAACTACGAA+TGG | 0.552729 | 4.2:-24497294 | MS.gene39628:CDS |
| GGCTACTTCATCGTCGATGG+TGG | 0.554184 | 4.2:+24497953 | None:intergenic |
| TTCTTAGGAGGTGATAGTGC+TGG | 0.559579 | 4.2:-24497483 | MS.gene39628:CDS |
| TCATCGGATCCATTCGTAGT+TGG | 0.564890 | 4.2:+24497285 | None:intergenic |
| AACGGCTACTTCATCGTCGA+TGG | 0.565230 | 4.2:+24497950 | None:intergenic |
| GTCGGGAAGGAAAATTTGGA+TGG | 0.565648 | 4.2:-24497429 | MS.gene39628:CDS |
| AAATGGATTGCTTCACATGT+TGG | 0.570725 | 4.2:-24497558 | MS.gene39628:CDS |
| CCATGGATGTAAACAAGAAG+AGG | 0.571505 | 4.2:+24497738 | None:intergenic |
| ACCGCAGCATTGTCACATGT+TGG | 0.575233 | 4.2:+24497066 | None:intergenic |
| CCATGAATCTTCATGACCTG+TGG | 0.577389 | 4.2:+24497590 | None:intergenic |
| TCATTAGCCGGGTTAATCAA+CGG | 0.581749 | 4.2:+24497261 | None:intergenic |
| AAGAACTGGGGTTAGATCAA+CGG | 0.586206 | 4.2:+24497932 | None:intergenic |
| CTTCTTGTTTACATCCATGG+TGG | 0.596392 | 4.2:-24497735 | MS.gene39628:CDS |
| TTTAAGTATTAGGGTCGGGA+AGG | 0.597411 | 4.2:-24497442 | MS.gene39628:CDS |
| AACATCTTTAGATTCAACGT+TGG | 0.601272 | 4.2:+24497836 | None:intergenic |
| CGATGACCCGTTGATTAACC+CGG | 0.602163 | 4.2:-24497268 | MS.gene39628:CDS |
| AATTGCTTGAGAAAAGTGGT+TGG | 0.605106 | 4.2:-24497149 | MS.gene39628:CDS |
| CATGAATCTTCATGACCTGT+GGG | 0.605733 | 4.2:+24497591 | None:intergenic |
| GGTGGAGGAGGTTGAATCCA+TGG | 0.605959 | 4.2:+24497971 | None:intergenic |
| TTTGTATAATTTAAGAACTG+GGG | 0.616246 | 4.2:+24497920 | None:intergenic |
| TGGATTGCTTCACATGTTGG+TGG | 0.616285 | 4.2:-24497555 | MS.gene39628:CDS |
| CCGGAACATCCTGTTCCCAC+AGG | 0.622998 | 4.2:-24497606 | MS.gene39628:CDS |
| CTAATGATCCGGATTTGAGG+AGG | 0.624327 | 4.2:-24497245 | MS.gene39628:CDS |
| TGCTGTGGAAGTGATTGAAA+CGG | 0.632909 | 4.2:-24497121 | MS.gene39628:CDS |
| CATGGATGTAAACAAGAAGA+GGG | 0.633400 | 4.2:+24497739 | None:intergenic |
| TGTTCATTACAGAAGAGCAC+CGG | 0.652233 | 4.2:-24497625 | MS.gene39628:CDS |
| CTTGAGAAAAGTGGTTGGGG+TGG | 0.652240 | 4.2:-24497144 | MS.gene39628:CDS |
| ACCAACATGTGACAATGCTG+CGG | 0.661762 | 4.2:-24497067 | MS.gene39628:CDS |
| CAATGCAGAAAGCACCACCA+TGG | 0.688801 | 4.2:+24497721 | None:intergenic |
| TGTGGAAGTGATTGAAACGG+AGG | 0.722544 | 4.2:-24497118 | MS.gene39628:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGAAAAGATTCATAATTTA+TGG | - | chr4.2:24497675-24497694 | MS.gene39628:CDS | 15.0% |
| !!! | TTATATTCATCCTTATTTTT+GGG | - | chr4.2:24497610-24497629 | MS.gene39628:CDS | 15.0% |
| !!! | TTTATATTCATCCTTATTTT+TGG | - | chr4.2:24497609-24497628 | MS.gene39628:CDS | 15.0% |
| !!! | TTTTGTATAATTTAAGAACT+GGG | + | chr4.2:24497079-24497098 | None:intergenic | 15.0% |
| !! | GTTCTTAAATTATACAAAAG+TGG | - | chr4.2:24497080-24497099 | MS.gene39628:CDS | 20.0% |
| !! | TTTGTATAATTTAAGAACTG+GGG | + | chr4.2:24497078-24497097 | None:intergenic | 20.0% |
| !!! | CTTTTGTATAATTTAAGAAC+TGG | + | chr4.2:24497080-24497099 | None:intergenic | 20.0% |
| !!! | TATATTCATCCTTATTTTTG+GGG | - | chr4.2:24497611-24497630 | MS.gene39628:CDS | 20.0% |
| AACATCTTTAGATTCAACGT+TGG | + | chr4.2:24497162-24497181 | None:intergenic | 30.0% | |
| CTTTCTCAAAATCTGCATAT+TGG | + | chr4.2:24497490-24497509 | None:intergenic | 30.0% | |
| TAACAGAGTTAAGGTAGTTA+TGG | + | chr4.2:24497322-24497341 | None:intergenic | 30.0% | |
| TGCACACCATTTAAGTATTA+GGG | - | chr4.2:24497544-24497563 | MS.gene39628:CDS | 30.0% | |
| TTAAGGTAGTTATGGTAGTT+TGG | + | chr4.2:24497314-24497333 | None:intergenic | 30.0% | |
| TTGCACACCATTTAAGTATT+AGG | - | chr4.2:24497543-24497562 | MS.gene39628:CDS | 30.0% | |
| !! | CAAGATATTTTGAAGGATAG+GGG | - | chr4.2:24497809-24497828 | MS.gene39628:CDS | 30.0% |
| !! | GCAAGATATTTTGAAGGATA+GGG | - | chr4.2:24497808-24497827 | MS.gene39628:CDS | 30.0% |
| !!! | GATTTTGAGAAAGTGTTCTT+AGG | - | chr4.2:24497497-24497516 | MS.gene39628:CDS | 30.0% |
| !!! | TTAGATTCAACGTTGGTTTT+AGG | + | chr4.2:24497155-24497174 | None:intergenic | 30.0% |
| AAGGAATTGCTTGAGAAAAG+TGG | - | chr4.2:24497842-24497861 | MS.gene39628:CDS | 35.0% | |
| AATTGCTTGAGAAAAGTGGT+TGG | - | chr4.2:24497846-24497865 | MS.gene39628:CDS | 35.0% | |
| ACCATTTAAGTATTAGGGTC+GGG | - | chr4.2:24497549-24497568 | MS.gene39628:CDS | 35.0% | |
| AGATTGCTTATTTGTGTTGC+TGG | - | chr4.2:24497785-24497804 | MS.gene39628:CDS | 35.0% | |
| ATTGCTTGAGAAAAGTGGTT+GGG | - | chr4.2:24497847-24497866 | MS.gene39628:CDS | 35.0% | |
| CAAGTGAAGTAACAGAGTTA+AGG | + | chr4.2:24497331-24497350 | None:intergenic | 35.0% | |
| CACCATTTAAGTATTAGGGT+CGG | - | chr4.2:24497548-24497567 | MS.gene39628:CDS | 35.0% | |
| CATGGATGTAAACAAGAAGA+GGG | + | chr4.2:24497259-24497278 | None:intergenic | 35.0% | |
| CTTTGATGAAGGAAACAACT+TGG | + | chr4.2:24497964-24497983 | None:intergenic | 35.0% | |
| TGCTGAGATGTTATGTTCTT+TGG | + | chr4.2:24497192-24497211 | None:intergenic | 35.0% | |
| ! | AAACAAGAAGAGGGAGTTTT+TGG | + | chr4.2:24497250-24497269 | None:intergenic | 35.0% |
| ! | AACAAGAAGAGGGAGTTTTT+GGG | + | chr4.2:24497249-24497268 | None:intergenic | 35.0% |
| ! | ACTTCACTTGCTAACGTTAT+TGG | - | chr4.2:24497341-24497360 | MS.gene39628:CDS | 35.0% |
| ! | CAAGTTGTTTCCTTCATCAA+AGG | - | chr4.2:24497962-24497981 | MS.gene39628:CDS | 35.0% |
| ! | GATTGCTTATTTGTGTTGCT+GGG | - | chr4.2:24497786-24497805 | MS.gene39628:CDS | 35.0% |
| ! | TGGATGGTTTGAAACTTGAA+GGG | - | chr4.2:24497582-24497601 | MS.gene39628:CDS | 35.0% |
| ! | TTGGATGGTTTGAAACTTGA+AGG | - | chr4.2:24497581-24497600 | MS.gene39628:CDS | 35.0% |
| !! | AAATGGATTGCTTCACATGT+TGG | - | chr4.2:24497437-24497456 | MS.gene39628:CDS | 35.0% |
| !! | ATATTTTGAAGGATAGGGGT+TGG | - | chr4.2:24497813-24497832 | MS.gene39628:CDS | 35.0% |
| !! | GGCAAGATATTTTGAAGGAT+AGG | - | chr4.2:24497807-24497826 | MS.gene39628:CDS | 35.0% |
| !! | TTTGAGAAAGTGTTCTTAGG+AGG | - | chr4.2:24497500-24497519 | MS.gene39628:CDS | 35.0% |
| !!! | TTGGTTTTAGGATCAAGAGA+TGG | + | chr4.2:24497143-24497162 | None:intergenic | 35.0% |
| AAGAACTGGGGTTAGATCAA+CGG | + | chr4.2:24497066-24497085 | None:intergenic | 40.0% | |
| CATGAATCTTCATGACCTGT+GGG | + | chr4.2:24497407-24497426 | None:intergenic | 40.0% | |
| CCATGGATGTAAACAAGAAG+AGG | + | chr4.2:24497260-24497279 | None:intergenic | 40.0% | |
| TCATTAGCCGGGTTAATCAA+CGG | + | chr4.2:24497737-24497756 | None:intergenic | 40.0% | |
| TCCCGACCCTAATACTTAAA+TGG | + | chr4.2:24497553-24497572 | None:intergenic | 40.0% | |
| TGCTGTGGAAGTGATTGAAA+CGG | - | chr4.2:24497874-24497893 | MS.gene39628:CDS | 40.0% | |
| TTATGGTAGTTTGGCGAGAA+AGG | + | chr4.2:24497305-24497324 | None:intergenic | 40.0% | |
| TTGCTTGAGAAAAGTGGTTG+GGG | - | chr4.2:24497848-24497867 | MS.gene39628:CDS | 40.0% | |
| TTTAAGTATTAGGGTCGGGA+AGG | - | chr4.2:24497553-24497572 | MS.gene39628:CDS | 40.0% | |
| TTTGCATGTCCAACTACGAA+TGG | - | chr4.2:24497701-24497720 | MS.gene39628:CDS | 40.0% | |
| ! | ATTCATGGCTTGCACTCAAA+TGG | - | chr4.2:24497420-24497439 | MS.gene39628:CDS | 40.0% |
| ! | CCTCTTCTTGTTTACATCCA+TGG | - | chr4.2:24497257-24497276 | MS.gene39628:CDS | 40.0% |
| ! | CTTCTTGTTTACATCCATGG+TGG | - | chr4.2:24497260-24497279 | MS.gene39628:CDS | 40.0% |
| ! | TGTTCATTACAGAAGAGCAC+CGG | - | chr4.2:24497370-24497389 | MS.gene39628:CDS | 40.0% |
| !! | GGATAGGGGTTGGTATTATA+AGG | - | chr4.2:24497823-24497842 | MS.gene39628:CDS | 40.0% |
| !! | TGCTGGGCAAGATATTTTGA+AGG | - | chr4.2:24497802-24497821 | MS.gene39628:CDS | 40.0% |
| !!! | GTTGGTGGGTAATTGGTTTT+TGG | + | chr4.2:24497227-24497246 | None:intergenic | 40.0% |
| !!! | GTTTTAGGATCAAGAGATGG+AGG | + | chr4.2:24497140-24497159 | None:intergenic | 40.0% |
| !!! | TCATCCTTATTTTTGGGGTG+TGG | - | chr4.2:24497616-24497635 | MS.gene39628:CDS | 40.0% |
| !!! | TTTTTGGGTTGGTGGGTAAT+TGG | + | chr4.2:24497234-24497253 | None:intergenic | 40.0% |
| ACCAACATGTGACAATGCTG+CGG | - | chr4.2:24497928-24497947 | MS.gene39628:CDS | 45.0% | |
| CATTAGCCGGGTTAATCAAC+GGG | + | chr4.2:24497736-24497755 | None:intergenic | 45.0% | |
| CCACAGGTCATGAAGATTCA+TGG | - | chr4.2:24497405-24497424 | MS.gene39628:CDS | 45.0% | |
| CCATGAATCTTCATGACCTG+TGG | + | chr4.2:24497408-24497427 | None:intergenic | 45.0% | |
| CGATCCACACCCCAAAAATA+AGG | + | chr4.2:24497623-24497642 | None:intergenic | 45.0% | |
| CTAATGATCCGGATTTGAGG+AGG | - | chr4.2:24497750-24497769 | MS.gene39628:CDS | 45.0% | |
| CTCAAATCCGGATCATTAGC+CGG | + | chr4.2:24497749-24497768 | None:intergenic | 45.0% | |
| GATTAACCCGGCTAATGATC+CGG | - | chr4.2:24497739-24497758 | MS.gene39628:CDS | 45.0% | |
| GTCGGGAAGGAAAATTTGGA+TGG | - | chr4.2:24497566-24497585 | MS.gene39628:CDS | 45.0% | |
| TAGGGTCGGGAAGGAAAATT+TGG | - | chr4.2:24497562-24497581 | MS.gene39628:CDS | 45.0% | |
| TCAAATCCGGATCATTAGCC+GGG | + | chr4.2:24497748-24497767 | None:intergenic | 45.0% | |
| TCATCGGATCCATTCGTAGT+TGG | + | chr4.2:24497713-24497732 | None:intergenic | 45.0% | |
| TGGATTGCTTCACATGTTGG+TGG | - | chr4.2:24497440-24497459 | MS.gene39628:CDS | 45.0% | |
| TGTGGAAGTGATTGAAACGG+AGG | - | chr4.2:24497877-24497896 | MS.gene39628:CDS | 45.0% | |
| TGTTCAGAGACTTGCAGGTA+CGG | - | chr4.2:24497106-24497125 | MS.gene39628:CDS | 45.0% | |
| ! | GCTTCACATGTTGGTGGAAA+TGG | - | chr4.2:24497446-24497465 | MS.gene39628:CDS | 45.0% |
| ! | TTCTTAGGAGGTGATAGTGC+TGG | - | chr4.2:24497512-24497531 | MS.gene39628:CDS | 45.0% |
| !! | GTGGAAATGGCTCTGATGAA+TGG | - | chr4.2:24497459-24497478 | MS.gene39628:CDS | 45.0% |
| !!! | AGAAGAGGGAGTTTTTGGGT+TGG | + | chr4.2:24497245-24497264 | None:intergenic | 45.0% |
| !!! | TTTTGGGGTGTGGATCGAAT+TGG | - | chr4.2:24497626-24497645 | MS.gene39628:CDS | 45.0% |
| AACGGCTACTTCATCGTCGA+TGG | + | chr4.2:24497048-24497067 | None:intergenic | 50.0% | |
| ACCGCAGCATTGTCACATGT+TGG | + | chr4.2:24497932-24497951 | None:intergenic | 50.0% | |
| CAACCCAACCTCCTCAAATC+CGG | + | chr4.2:24497761-24497780 | None:intergenic | 50.0% | |
| CGGCTAATGATCCGGATTTG+AGG | - | chr4.2:24497747-24497766 | MS.gene39628:CDS | 50.0% | |
| CGGGTTAATCAACGGGTCAT+CGG | + | chr4.2:24497729-24497748 | None:intergenic | 50.0% | |
| CTTGAGAAAAGTGGTTGGGG+TGG | - | chr4.2:24497851-24497870 | MS.gene39628:CDS | 50.0% | |
| GATCCGGATTTGAGGAGGTT+GGG | - | chr4.2:24497755-24497774 | MS.gene39628:CDS | 50.0% | |
| TCTTCATGACCTGTGGGAAC+AGG | + | chr4.2:24497401-24497420 | None:intergenic | 50.0% | |
| TGATCCGGATTTGAGGAGGT+TGG | - | chr4.2:24497754-24497773 | MS.gene39628:CDS | 50.0% | |
| ! | CGATGACCCGTTGATTAACC+CGG | - | chr4.2:24497727-24497746 | MS.gene39628:CDS | 50.0% |
| ! | TACTTCATCGTCGATGGTGG+AGG | + | chr4.2:24497042-24497061 | None:intergenic | 50.0% |
| !! | CAATGCAGAAAGCACCACCA+TGG | + | chr4.2:24497277-24497296 | None:intergenic | 50.0% |
| !!! | AGAGGGAGTTTTTGGGTTGG+TGG | + | chr4.2:24497242-24497261 | None:intergenic | 50.0% |
| !!! | GAGGGAGTTTTTGGGTTGGT+GGG | + | chr4.2:24497241-24497260 | None:intergenic | 50.0% |
| CCTGTGGGAACAGGATGTTC+CGG | + | chr4.2:24497392-24497411 | None:intergenic | 55.0% | |
| GGCTACTTCATCGTCGATGG+TGG | + | chr4.2:24497045-24497064 | None:intergenic | 55.0% | |
| GGTCGTGTTCAGAGACTTGC+AGG | - | chr4.2:24497101-24497120 | MS.gene39628:CDS | 55.0% | |
| !! | TTCATCGTCGATGGTGGAGG+AGG | + | chr4.2:24497039-24497058 | None:intergenic | 55.0% |
| CCGGAACATCCTGTTCCCAC+AGG | - | chr4.2:24497389-24497408 | MS.gene39628:CDS | 60.0% | |
| ! | AAGTGGTTGGGGTGGTGCTG+TGG | - | chr4.2:24497859-24497878 | MS.gene39628:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 24497026 | 24497991 | 24497026 | ID=MS.gene39628 |
| chr4.2 | mRNA | 24497026 | 24497991 | 24497026 | ID=MS.gene39628.t1;Parent=MS.gene39628 |
| chr4.2 | exon | 24497026 | 24497991 | 24497026 | ID=MS.gene39628.t1.exon1;Parent=MS.gene39628.t1 |
| chr4.2 | CDS | 24497026 | 24497991 | 24497026 | ID=cds.MS.gene39628.t1;Parent=MS.gene39628.t1 |
| Gene Sequence |
| Protein sequence |
