Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54967.t1 | XP_003624463.1 | 88.3 | 571 | 6 | 1 | 1 | 510 | 1 | 571 | 5.20E-275 | 956.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54967.t1 | Q9LW29 | 65.7 | 575 | 132 | 2 | 1 | 510 | 1 | 575 | 8.0e-216 | 751.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54967.t1 | G7KW81 | 88.3 | 571 | 6 | 1 | 1 | 510 | 1 | 571 | 3.7e-275 | 956.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene54967 | 0.887406 | 1.47E-72 | -1.69E-46 |
| MS.gene049159 | MS.gene54967 | 0.837376 | 5.39E-57 | -1.69E-46 |
| MS.gene049254 | MS.gene54967 | 0.838298 | 3.12E-57 | -1.69E-46 |
| MS.gene049343 | MS.gene54967 | 0.850424 | 1.71E-60 | -1.69E-46 |
| MS.gene049350 | MS.gene54967 | 0.857106 | 2.05E-62 | -1.69E-46 |
| MS.gene049368 | MS.gene54967 | 0.841064 | 5.96E-58 | -1.69E-46 |
| MS.gene049404 | MS.gene54967 | 0.847166 | 1.37E-59 | -1.69E-46 |
| MS.gene049435 | MS.gene54967 | 0.808511 | 2.99E-50 | -1.69E-46 |
| MS.gene049501 | MS.gene54967 | 0.801045 | 1.08E-48 | -1.69E-46 |
| MS.gene049672 | MS.gene54967 | 0.808963 | 2.39E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene54967 | 0.866963 | 1.94E-65 | -1.69E-46 |
| MS.gene049807 | MS.gene54967 | 0.823435 | 1.39E-53 | -1.69E-46 |
| MS.gene049825 | MS.gene54967 | 0.800664 | 1.30E-48 | -1.69E-46 |
| MS.gene049850 | MS.gene54967 | 0.864466 | 1.19E-64 | -1.69E-46 |
| MS.gene049983 | MS.gene54967 | 0.817723 | 2.84E-52 | -1.69E-46 |
| MS.gene050156 | MS.gene54967 | 0.835079 | 2.07E-56 | -1.69E-46 |
| MS.gene050251 | MS.gene54967 | 0.814911 | 1.21E-51 | -1.69E-46 |
| MS.gene050273 | MS.gene54967 | 0.801498 | 8.75E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene54967 | 0.807801 | 4.23E-50 | -1.69E-46 |
| MS.gene05045 | MS.gene54967 | 0.822946 | 1.80E-53 | -1.69E-46 |
| MS.gene050551 | MS.gene54967 | 0.831667 | 1.47E-55 | -1.69E-46 |
| MS.gene050559 | MS.gene54967 | 0.812587 | 3.93E-51 | -1.69E-46 |
| MS.gene050561 | MS.gene54967 | 0.813749 | 2.19E-51 | -1.69E-46 |
| MS.gene050562 | MS.gene54967 | 0.802352 | 5.84E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene54967 | 0.806657 | 7.40E-50 | -1.69E-46 |
| MS.gene050689 | MS.gene54967 | 0.841714 | 4.02E-58 | -1.69E-46 |
| MS.gene050759 | MS.gene54967 | 0.829441 | 5.14E-55 | -1.69E-46 |
| MS.gene050807 | MS.gene54967 | 0.81479 | 1.29E-51 | -1.69E-46 |
| MS.gene050901 | MS.gene54967 | 0.828415 | 9.10E-55 | -1.69E-46 |
| MS.gene050962 | MS.gene54967 | 0.818984 | 1.47E-52 | -1.69E-46 |
| MS.gene051018 | MS.gene54967 | 0.800338 | 1.51E-48 | -1.69E-46 |
| MS.gene051029 | MS.gene54967 | 0.821644 | 3.62E-53 | -1.69E-46 |
| MS.gene051180 | MS.gene54967 | 0.826222 | 3.05E-54 | -1.69E-46 |
| MS.gene051198 | MS.gene54967 | 0.835335 | 1.78E-56 | -1.69E-46 |
| MS.gene051201 | MS.gene54967 | 0.801891 | 7.27E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene54967 | 0.85507 | 8.07E-62 | -1.69E-46 |
| MS.gene051279 | MS.gene54967 | 0.843063 | 1.76E-58 | -1.69E-46 |
| MS.gene05132 | MS.gene54967 | 0.800506 | 1.40E-48 | -1.69E-46 |
| MS.gene051363 | MS.gene54967 | 0.816833 | 4.51E-52 | -1.69E-46 |
| MS.gene051365 | MS.gene54967 | 0.81416 | 1.78E-51 | -1.69E-46 |
| MS.gene051388 | MS.gene54967 | 0.80325 | 3.81E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene54967 | 0.83964 | 1.40E-57 | -1.69E-46 |
| MS.gene051594 | MS.gene54967 | 0.804999 | 1.65E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene54967 | 0.819747 | 9.87E-53 | -1.69E-46 |
| MS.gene051719 | MS.gene54967 | 0.867682 | 1.14E-65 | -1.69E-46 |
| MS.gene051720 | MS.gene54967 | 0.867805 | 1.04E-65 | -1.69E-46 |
| MS.gene051744 | MS.gene54967 | 0.867775 | 1.07E-65 | -1.69E-46 |
| MS.gene051800 | MS.gene54967 | 0.826835 | 2.18E-54 | -1.69E-46 |
| MS.gene051957 | MS.gene54967 | 0.809797 | 1.58E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene54967 | 0.819754 | 9.84E-53 | -1.69E-46 |
| MS.gene052012 | MS.gene54967 | 0.809288 | 2.04E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene54967 | 0.823228 | 1.55E-53 | -1.69E-46 |
| MS.gene052037 | MS.gene54967 | 0.80626 | 8.97E-50 | -1.69E-46 |
| MS.gene052168 | MS.gene54967 | 0.841724 | 3.99E-58 | -1.69E-46 |
| MS.gene052307 | MS.gene54967 | 0.830679 | 2.56E-55 | -1.69E-46 |
| MS.gene052323 | MS.gene54967 | 0.831759 | 1.39E-55 | -1.69E-46 |
| MS.gene052335 | MS.gene54967 | 0.819568 | 1.08E-52 | -1.69E-46 |
| MS.gene052384 | MS.gene54967 | 0.803803 | 2.93E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene54967 | 0.86733 | 1.48E-65 | -1.69E-46 |
| MS.gene052516 | MS.gene54967 | 0.874494 | 6.47E-68 | -1.69E-46 |
| MS.gene052519 | MS.gene54967 | 0.856874 | 2.39E-62 | -1.69E-46 |
| MS.gene052582 | MS.gene54967 | 0.812582 | 3.94E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene54967 | 0.819969 | 8.78E-53 | -1.69E-46 |
| MS.gene052609 | MS.gene54967 | 0.837475 | 5.09E-57 | -1.69E-46 |
| MS.gene052611 | MS.gene54967 | 0.841452 | 4.71E-58 | -1.69E-46 |
| MS.gene052665 | MS.gene54967 | 0.80515 | 1.53E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene54967 | 0.857532 | 1.53E-62 | -1.69E-46 |
| MS.gene052775 | MS.gene54967 | 0.822954 | 1.80E-53 | -1.69E-46 |
| MS.gene052863 | MS.gene54967 | 0.854508 | 1.18E-61 | -1.69E-46 |
| MS.gene052896 | MS.gene54967 | 0.825888 | 3.67E-54 | -1.69E-46 |
| MS.gene053008 | MS.gene54967 | 0.830567 | 2.73E-55 | -1.69E-46 |
| MS.gene053079 | MS.gene54967 | 0.86798 | 9.17E-66 | -1.69E-46 |
| MS.gene053122 | MS.gene54967 | 0.806838 | 6.77E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene54967 | 0.843117 | 1.71E-58 | -1.69E-46 |
| MS.gene053226 | MS.gene54967 | 0.886382 | 3.59E-72 | -1.69E-46 |
| MS.gene05350 | MS.gene54967 | 0.823366 | 1.44E-53 | -1.69E-46 |
| MS.gene053581 | MS.gene54967 | 0.831877 | 1.30E-55 | -1.69E-46 |
| MS.gene053597 | MS.gene54967 | 0.801248 | 9.85E-49 | -1.69E-46 |
| MS.gene053599 | MS.gene54967 | 0.838966 | 2.10E-57 | -1.69E-46 |
| MS.gene053621 | MS.gene54967 | 0.811173 | 7.99E-51 | -1.69E-46 |
| MS.gene05364 | MS.gene54967 | 0.836659 | 8.22E-57 | -1.69E-46 |
| MS.gene053931 | MS.gene54967 | 0.801012 | 1.10E-48 | -1.69E-46 |
| MS.gene054139 | MS.gene54967 | 0.836378 | 9.69E-57 | -1.69E-46 |
| MS.gene054142 | MS.gene54967 | 0.808059 | 3.73E-50 | -1.69E-46 |
| MS.gene054178 | MS.gene54967 | 0.804598 | 2.00E-49 | -1.69E-46 |
| MS.gene054236 | MS.gene54967 | 0.813937 | 1.99E-51 | -1.69E-46 |
| MS.gene05423 | MS.gene54967 | 0.829166 | 5.99E-55 | -1.69E-46 |
| MS.gene054467 | MS.gene54967 | 0.816752 | 4.70E-52 | -1.69E-46 |
| MS.gene054472 | MS.gene54967 | 0.802233 | 6.18E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene54967 | 0.80187 | 7.34E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene54967 | 0.842234 | 2.93E-58 | -1.69E-46 |
| MS.gene05458 | MS.gene54967 | 0.867899 | 9.74E-66 | -1.69E-46 |
| MS.gene05462 | MS.gene54967 | 0.818291 | 2.12E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene54967 | 0.870734 | 1.17E-66 | -1.69E-46 |
| MS.gene054709 | MS.gene54967 | 0.827234 | 1.75E-54 | -1.69E-46 |
| MS.gene054775 | MS.gene54967 | 0.858764 | 6.59E-63 | -1.69E-46 |
| MS.gene054943 | MS.gene54967 | 0.803034 | 4.23E-49 | -1.69E-46 |
| MS.gene054991 | MS.gene54967 | 0.825966 | 3.51E-54 | -1.69E-46 |
| MS.gene055144 | MS.gene54967 | 0.809589 | 1.76E-50 | -1.69E-46 |
| MS.gene05517 | MS.gene54967 | 0.830573 | 2.72E-55 | -1.69E-46 |
| MS.gene055227 | MS.gene54967 | 0.816254 | 6.08E-52 | -1.69E-46 |
| MS.gene055228 | MS.gene54967 | 0.814893 | 1.22E-51 | -1.69E-46 |
| MS.gene055313 | MS.gene54967 | 0.821567 | 3.77E-53 | -1.69E-46 |
| MS.gene055465 | MS.gene54967 | 0.847875 | 8.77E-60 | -1.69E-46 |
| MS.gene055466 | MS.gene54967 | 0.865129 | 7.38E-65 | -1.69E-46 |
| MS.gene055468 | MS.gene54967 | 0.844065 | 9.52E-59 | -1.69E-46 |
| MS.gene055469 | MS.gene54967 | 0.822971 | 1.78E-53 | -1.69E-46 |
| MS.gene055512 | MS.gene54967 | 0.850434 | 1.70E-60 | -1.69E-46 |
| MS.gene055513 | MS.gene54967 | 0.895655 | 7.79E-76 | -1.69E-46 |
| MS.gene055537 | MS.gene54967 | 0.811471 | 6.88E-51 | -1.69E-46 |
| MS.gene055580 | MS.gene54967 | -0.818745 | 1.67E-52 | -1.69E-46 |
| MS.gene055586 | MS.gene54967 | 0.802103 | 6.57E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene54967 | 0.810829 | 9.49E-51 | -1.69E-46 |
| MS.gene055694 | MS.gene54967 | 0.80111 | 1.05E-48 | -1.69E-46 |
| MS.gene055778 | MS.gene54967 | 0.815423 | 9.32E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene54967 | 0.858045 | 1.08E-62 | -1.69E-46 |
| MS.gene055841 | MS.gene54967 | 0.81251 | 4.09E-51 | -1.69E-46 |
| MS.gene055864 | MS.gene54967 | 0.814026 | 1.90E-51 | -1.69E-46 |
| MS.gene055926 | MS.gene54967 | 0.839306 | 1.71E-57 | -1.69E-46 |
| MS.gene056005 | MS.gene54967 | 0.824917 | 6.23E-54 | -1.69E-46 |
| MS.gene056043 | MS.gene54967 | -0.803721 | 3.05E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene54967 | 0.80819 | 3.50E-50 | -1.69E-46 |
| MS.gene05604 | MS.gene54967 | 0.811749 | 5.99E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene54967 | 0.854344 | 1.31E-61 | -1.69E-46 |
| MS.gene056173 | MS.gene54967 | 0.823754 | 1.17E-53 | -1.69E-46 |
| MS.gene056174 | MS.gene54967 | 0.824986 | 6.00E-54 | -1.69E-46 |
| MS.gene056181 | MS.gene54967 | 0.823895 | 1.08E-53 | -1.69E-46 |
| MS.gene056215 | MS.gene54967 | 0.800406 | 1.46E-48 | -1.69E-46 |
| MS.gene056308 | MS.gene54967 | 0.896992 | 2.16E-76 | -1.69E-46 |
| MS.gene056366 | MS.gene54967 | 0.854925 | 8.90E-62 | -1.69E-46 |
| MS.gene056390 | MS.gene54967 | 0.832247 | 1.05E-55 | -1.69E-46 |
| MS.gene056507 | MS.gene54967 | 0.838798 | 2.32E-57 | -1.69E-46 |
| MS.gene056522 | MS.gene54967 | -0.802489 | 5.47E-49 | -1.69E-46 |
| MS.gene056553 | MS.gene54967 | 0.806875 | 6.65E-50 | -1.69E-46 |
| MS.gene056595 | MS.gene54967 | 0.842663 | 2.25E-58 | -1.69E-46 |
| MS.gene056699 | MS.gene54967 | 0.837641 | 4.61E-57 | -1.69E-46 |
| MS.gene056776 | MS.gene54967 | 0.804631 | 1.97E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene54967 | 0.84408 | 9.43E-59 | -1.69E-46 |
| MS.gene05690 | MS.gene54967 | 0.801463 | 8.90E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene54967 | 0.84133 | 5.07E-58 | -1.69E-46 |
| MS.gene057102 | MS.gene54967 | 0.824924 | 6.20E-54 | -1.69E-46 |
| MS.gene057132 | MS.gene54967 | 0.808463 | 3.06E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene54967 | 0.832598 | 8.63E-56 | -1.69E-46 |
| MS.gene057294 | MS.gene54967 | 0.811356 | 7.29E-51 | -1.69E-46 |
| MS.gene057360 | MS.gene54967 | 0.812041 | 5.18E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene54967 | 0.809608 | 1.74E-50 | -1.69E-46 |
| MS.gene057446 | MS.gene54967 | 0.803803 | 2.93E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene54967 | 0.833297 | 5.78E-56 | -1.69E-46 |
| MS.gene057855 | MS.gene54967 | 0.81604 | 6.79E-52 | -1.69E-46 |
| MS.gene057915 | MS.gene54967 | 0.863511 | 2.36E-64 | -1.69E-46 |
| MS.gene058008 | MS.gene54967 | 0.800944 | 1.14E-48 | -1.69E-46 |
| MS.gene058009 | MS.gene54967 | 0.824346 | 8.48E-54 | -1.69E-46 |
| MS.gene058010 | MS.gene54967 | 0.835557 | 1.57E-56 | -1.69E-46 |
| MS.gene058339 | MS.gene54967 | 0.824847 | 6.47E-54 | -1.69E-46 |
| MS.gene058360 | MS.gene54967 | 0.804473 | 2.12E-49 | -1.69E-46 |
| MS.gene05847 | MS.gene54967 | 0.838217 | 3.28E-57 | -1.69E-46 |
| MS.gene058625 | MS.gene54967 | 0.880097 | 7.27E-70 | -1.69E-46 |
| MS.gene058636 | MS.gene54967 | 0.843601 | 1.27E-58 | -1.69E-46 |
| MS.gene058647 | MS.gene54967 | 0.805503 | 1.29E-49 | -1.69E-46 |
| MS.gene058649 | MS.gene54967 | 0.812958 | 3.26E-51 | -1.69E-46 |
| MS.gene058668 | MS.gene54967 | 0.818481 | 1.92E-52 | -1.69E-46 |
| MS.gene058681 | MS.gene54967 | 0.80123 | 9.93E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene54967 | 0.814856 | 1.24E-51 | -1.69E-46 |
| MS.gene058783 | MS.gene54967 | 0.823385 | 1.43E-53 | -1.69E-46 |
| MS.gene058829 | MS.gene54967 | 0.812396 | 4.33E-51 | -1.69E-46 |
| MS.gene05894 | MS.gene54967 | 0.801323 | 9.50E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene54967 | 0.827029 | 1.96E-54 | -1.69E-46 |
| MS.gene05897 | MS.gene54967 | 0.802913 | 4.48E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene54967 | 0.824807 | 6.61E-54 | -1.69E-46 |
| MS.gene059570 | MS.gene54967 | 0.849069 | 4.10E-60 | -1.69E-46 |
| MS.gene059625 | MS.gene54967 | 0.834915 | 2.27E-56 | -1.69E-46 |
| MS.gene059725 | MS.gene54967 | 0.862471 | 4.95E-64 | -1.69E-46 |
| MS.gene05978 | MS.gene54967 | 0.831176 | 1.94E-55 | -1.69E-46 |
| MS.gene059842 | MS.gene54967 | 0.856553 | 2.98E-62 | -1.69E-46 |
| MS.gene05985 | MS.gene54967 | -0.806954 | 6.40E-50 | -1.69E-46 |
| MS.gene059937 | MS.gene54967 | 0.809485 | 1.85E-50 | -1.69E-46 |
| MS.gene059965 | MS.gene54967 | 0.850433 | 1.70E-60 | -1.69E-46 |
| MS.gene060322 | MS.gene54967 | 0.810753 | 9.86E-51 | -1.69E-46 |
| MS.gene060352 | MS.gene54967 | 0.805287 | 1.44E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene54967 | 0.807112 | 5.93E-50 | -1.69E-46 |
| MS.gene060435 | MS.gene54967 | 0.803052 | 4.19E-49 | -1.69E-46 |
| MS.gene060519 | MS.gene54967 | 0.820657 | 6.11E-53 | -1.69E-46 |
| MS.gene06052 | MS.gene54967 | 0.809811 | 1.57E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene54967 | 0.855533 | 5.92E-62 | -1.69E-46 |
| MS.gene060637 | MS.gene54967 | 0.829059 | 6.36E-55 | -1.69E-46 |
| MS.gene060803 | MS.gene54967 | 0.845552 | 3.78E-59 | -1.69E-46 |
| MS.gene060935 | MS.gene54967 | 0.844932 | 5.57E-59 | -1.69E-46 |
| MS.gene060937 | MS.gene54967 | 0.837923 | 3.90E-57 | -1.69E-46 |
| MS.gene061100 | MS.gene54967 | 0.806588 | 7.65E-50 | -1.69E-46 |
| MS.gene061188 | MS.gene54967 | 0.809508 | 1.83E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54967.t1 | MTR_7g083610 | 87.040 | 571 | 13 | 2 | 1 | 510 | 1 | 571 | 0.0 | 1000 |
| MS.gene54967.t1 | MTR_1g088950 | 52.281 | 570 | 207 | 4 | 4 | 510 | 14 | 581 | 0.0 | 599 |
| MS.gene54967.t1 | MTR_8g098695 | 49.215 | 573 | 215 | 6 | 6 | 510 | 9 | 573 | 0.0 | 537 |
| MS.gene54967.t1 | MTR_4g091290 | 47.979 | 569 | 228 | 5 | 4 | 510 | 26 | 588 | 0.0 | 521 |
| MS.gene54967.t1 | MTR_5g065490 | 43.847 | 577 | 247 | 9 | 4 | 510 | 47 | 616 | 7.09e-156 | 457 |
| MS.gene54967.t1 | MTR_3g100860 | 43.576 | 576 | 245 | 10 | 8 | 510 | 25 | 593 | 1.61e-151 | 446 |
| MS.gene54967.t1 | MTR_5g081870 | 30.241 | 582 | 317 | 13 | 6 | 510 | 13 | 582 | 4.73e-70 | 234 |
| MS.gene54967.t1 | MTR_3g070140 | 28.401 | 588 | 329 | 13 | 2 | 507 | 13 | 590 | 3.69e-60 | 208 |
| MS.gene54967.t1 | MTR_5g086490 | 73.282 | 131 | 20 | 1 | 1 | 131 | 1 | 116 | 7.42e-59 | 191 |
| MS.gene54967.t1 | MTR_2g021030 | 24.843 | 479 | 292 | 17 | 4 | 459 | 11 | 444 | 6.07e-19 | 89.7 |
| MS.gene54967.t1 | MTR_2g021030 | 25.151 | 497 | 301 | 17 | 4 | 450 | 11 | 486 | 6.07e-18 | 87.4 |
| MS.gene54967.t1 | MTR_4g094932 | 25.942 | 451 | 248 | 20 | 1 | 424 | 40 | 431 | 2.04e-14 | 76.3 |
| MS.gene54967.t1 | MTR_1g018790 | 27.763 | 371 | 216 | 17 | 1 | 348 | 61 | 402 | 4.07e-13 | 72.0 |
| MS.gene54967.t1 | MTR_7g112570 | 23.651 | 482 | 295 | 19 | 3 | 431 | 48 | 509 | 1.24e-11 | 67.8 |
| MS.gene54967.t1 | MTR_7g112570 | 23.651 | 482 | 295 | 19 | 3 | 431 | 48 | 509 | 1.35e-11 | 67.4 |
| MS.gene54967.t1 | MTR_7g112570 | 23.651 | 482 | 295 | 19 | 3 | 431 | 48 | 509 | 1.51e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54967.t1 | AT1G12820 | 64.471 | 577 | 138 | 3 | 1 | 510 | 1 | 577 | 0.0 | 751 |
| MS.gene54967.t1 | AT3G26810 | 65.739 | 575 | 132 | 3 | 1 | 510 | 1 | 575 | 0.0 | 749 |
| MS.gene54967.t1 | AT3G62980 | 51.754 | 570 | 210 | 4 | 4 | 510 | 9 | 576 | 0.0 | 577 |
| MS.gene54967.t1 | AT4G03190 | 49.649 | 570 | 221 | 4 | 4 | 510 | 5 | 571 | 0.0 | 561 |
| MS.gene54967.t1 | AT5G49980 | 41.105 | 579 | 260 | 10 | 4 | 510 | 50 | 619 | 5.23e-138 | 412 |
| MS.gene54967.t1 | AT4G24390 | 40.385 | 572 | 270 | 7 | 6 | 510 | 56 | 623 | 2.27e-133 | 400 |
| MS.gene54967.t1 | AT4G24390 | 40.385 | 572 | 270 | 7 | 6 | 510 | 56 | 623 | 2.27e-133 | 400 |
| MS.gene54967.t1 | AT2G39940 | 28.299 | 576 | 337 | 11 | 6 | 510 | 18 | 588 | 1.02e-71 | 239 |
| MS.gene54967.t1 | AT4G15475 | 25.427 | 468 | 290 | 16 | 2 | 438 | 9 | 448 | 5.30e-21 | 97.1 |
| MS.gene54967.t1 | AT5G67250 | 25.118 | 422 | 253 | 14 | 4 | 413 | 46 | 416 | 1.15e-15 | 80.1 |
Find 122 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAATTAATATCGCCTTTA+AGG | 0.025572 | 7.2:-23746517 | None:intergenic |
| CTTAATTTCGCTTGCCTTAA+AGG | 0.046724 | 7.2:+23746503 | MS.gene54967:CDS |
| AACCTGAATCGGATAAAATT+TGG | 0.135051 | 7.2:-23747369 | None:intergenic |
| ACAAGTGATGTGCAGCTTTC+TGG | 0.161598 | 7.2:-23746476 | None:intergenic |
| CCTTAAAGGCGATATTAATT+TGG | 0.173907 | 7.2:+23746517 | MS.gene54967:CDS |
| TGTTGAAATGTAGGTCTCTT+AGG | 0.191405 | 7.2:+23746393 | MS.gene54967:intron |
| AGATGCCTATGCTAAGTTTA+AGG | 0.202777 | 7.2:+23746691 | MS.gene54967:CDS |
| CTTCAACTTCATTCTCTTGC+AGG | 0.226329 | 7.2:-23746424 | None:intergenic |
| CAACTAATGGATTTGGGAAT+TGG | 0.245004 | 7.2:+23746644 | MS.gene54967:CDS |
| CAGCCGCTAGATGAAGGTTT+TGG | 0.248633 | 7.2:+23747432 | MS.gene54967:CDS |
| GAGCTATGCAGCAGGCATTC+TGG | 0.272900 | 7.2:+23746826 | MS.gene54967:CDS |
| CTGCTGTTGCTGCTAATTGC+AGG | 0.279510 | 7.2:+23745668 | MS.gene54967:CDS |
| AGCACCTCAACTAATGGATT+TGG | 0.298955 | 7.2:+23746637 | MS.gene54967:CDS |
| ACATGTTCTATTACCTCGTC+TGG | 0.301048 | 7.2:-23745250 | None:intergenic |
| GCGGGAAACTACAGCGCTTA+TGG | 0.304697 | 7.2:+23746879 | MS.gene54967:CDS |
| TGCTAAGAATAAGGTTGGTT+TGG | 0.312116 | 7.2:+23745522 | MS.gene54967:CDS |
| TAGTTTGGTTCCTCATGGTT+GGG | 0.318544 | 7.2:+23745468 | MS.gene54967:CDS |
| TGACAGAAACTCTTTGTCTT+TGG | 0.323445 | 7.2:+23745297 | MS.gene54967:CDS |
| TAAATAGCTGCAAGGCTAAA+AGG | 0.326621 | 7.2:-23746770 | None:intergenic |
| CTCCTAACCTTAAGAGTCTA+AGG | 0.327273 | 7.2:+23746567 | MS.gene54967:CDS |
| CTTAAAGGCGATATTAATTT+GGG | 0.327923 | 7.2:+23746518 | MS.gene54967:CDS |
| AGCTATGCAGCAGGCATTCT+GGG | 0.329527 | 7.2:+23746827 | MS.gene54967:CDS |
| TGAAGCACTTGCTAAGAATA+AGG | 0.333907 | 7.2:+23745513 | MS.gene54967:CDS |
| GATGTTAAGTTCTGGCAAAT+TGG | 0.351644 | 7.2:-23746794 | None:intergenic |
| TGTTTAACCTTAGACTCTTA+AGG | 0.353638 | 7.2:-23746574 | None:intergenic |
| AAAGTTAAAGATTTCAGATC+AGG | 0.376006 | 7.2:-23745418 | None:intergenic |
| TCTGAAATCTTTAACTTTGA+AGG | 0.377635 | 7.2:+23745423 | MS.gene54967:CDS |
| TTAGTTCTTGTTAGCTGTGA+AGG | 0.381060 | 7.2:+23745625 | MS.gene54967:CDS |
| ACCTGAATCGGATAAAATTT+GGG | 0.388473 | 7.2:-23747368 | None:intergenic |
| AATGCGAGCACCTCAACTAA+TGG | 0.395557 | 7.2:+23746631 | MS.gene54967:CDS |
| AAGTCAATAACCAGTCTGTC+AGG | 0.405734 | 7.2:+23746731 | MS.gene54967:CDS |
| TTAGTTTGGTTCCTCATGGT+TGG | 0.407238 | 7.2:+23745467 | MS.gene54967:CDS |
| TCTAGCGGCTGCATTGTGTC+AGG | 0.407670 | 7.2:-23747420 | None:intergenic |
| GTTGAAATGTAGGTCTCTTA+GGG | 0.408186 | 7.2:+23746394 | MS.gene54967:intron |
| GGCTGCATTGTGTCAGGGTC+AGG | 0.410171 | 7.2:-23747414 | None:intergenic |
| ATGTTGTCTATTGCATTTGC+TGG | 0.411937 | 7.2:+23747558 | MS.gene54967:CDS |
| AGGTTGGTTTGGAGGAACTT+AGG | 0.414550 | 7.2:+23745533 | MS.gene54967:CDS |
| CGGGAAACTACAGCGCTTAT+GGG | 0.416014 | 7.2:+23746880 | MS.gene54967:CDS |
| ATCGTACAGTGGCTGGGAAA+AGG | 0.418126 | 7.2:+23747859 | MS.gene54967:CDS |
| GCACCTCAACTAATGGATTT+GGG | 0.425041 | 7.2:+23746638 | MS.gene54967:CDS |
| CTGAAATCTTTAACTTTGAA+GGG | 0.431379 | 7.2:+23745424 | MS.gene54967:CDS |
| TATTTGTATCGTACAGTGGC+TGG | 0.438724 | 7.2:+23747852 | MS.gene54967:CDS |
| AACCTTAGACTCTTAAGGTT+AGG | 0.438734 | 7.2:-23746569 | None:intergenic |
| CTCTATTAGTCCTGAGAGGT+TGG | 0.445130 | 7.2:+23745384 | MS.gene54967:CDS |
| TAAGAATAAGGTTGGTTTGG+AGG | 0.445339 | 7.2:+23745525 | MS.gene54967:CDS |
| ATGAAACAATGCGATCCCTT+TGG | 0.454128 | 7.2:+23747694 | MS.gene54967:CDS |
| TGTCTTTGGTATGCAAAAGT+TGG | 0.456705 | 7.2:+23745311 | MS.gene54967:CDS |
| TGCTGCATAGCTCAAGTTCA+AGG | 0.458884 | 7.2:-23746816 | None:intergenic |
| TAGTTCTTGTTAGCTGTGAA+GGG | 0.462515 | 7.2:+23745626 | MS.gene54967:CDS |
| AGTTCAAGGATGTTAAGTTC+TGG | 0.465857 | 7.2:-23746802 | None:intergenic |
| AGTTTGGTTCCTCATGGTTG+GGG | 0.466110 | 7.2:+23745469 | MS.gene54967:CDS |
| CAAGGATACATAACCTGAAT+CGG | 0.468868 | 7.2:-23747380 | None:intergenic |
| AAGATGCACCCGACTATGTA+TGG | 0.469551 | 7.2:+23747883 | MS.gene54967:CDS |
| TACTGTTATGAGAGCAGCAT+TGG | 0.472434 | 7.2:-23747334 | None:intergenic |
| TTAGCAAGTGCTTCAATCCA+TGG | 0.473895 | 7.2:-23745505 | None:intergenic |
| GCAGATTGTTATGTGGAAGA+TGG | 0.476183 | 7.2:+23747810 | MS.gene54967:CDS |
| TCGTACAGTGGCTGGGAAAA+GGG | 0.479007 | 7.2:+23747860 | MS.gene54967:CDS |
| GATCTTCAGTGAAAGTGAAC+AGG | 0.481093 | 7.2:+23747788 | MS.gene54967:CDS |
| AACCTCTCCACCAACCTCTC+AGG | 0.489862 | 7.2:-23745394 | None:intergenic |
| TGTGGAAGATGGGCAGAGAG+TGG | 0.494500 | 7.2:+23747821 | MS.gene54967:CDS |
| GCACTTGCTAAGAATAAGGT+TGG | 0.496983 | 7.2:+23745517 | MS.gene54967:CDS |
| TATTGACTTGCACTTAAGAA+TGG | 0.502436 | 7.2:-23746717 | None:intergenic |
| GACCAGGTCTTCCTTTACAT+TGG | 0.502533 | 7.2:+23747513 | MS.gene54967:CDS |
| CTGAGGCGGCTATCACTCTC+AGG | 0.508102 | 7.2:+23747480 | MS.gene54967:CDS |
| GAGATTAGAGACTGTCCATT+CGG | 0.509013 | 7.2:+23747639 | MS.gene54967:CDS |
| TGGAGGAACTTAGGTTGAAG+AGG | 0.518144 | 7.2:+23745542 | MS.gene54967:CDS |
| GGAACTTAGGTTGAAGAGGA+TGG | 0.518519 | 7.2:+23745546 | MS.gene54967:CDS |
| TTGGTTCCTCATGGTTGGGG+TGG | 0.518779 | 7.2:+23745472 | MS.gene54967:CDS |
| TACAGAGTCCATACATAGTC+GGG | 0.521912 | 7.2:-23747891 | None:intergenic |
| CAGATTGTTATGTGGAAGAT+GGG | 0.522068 | 7.2:+23747811 | MS.gene54967:CDS |
| ATCCTTTGCAATGCATCGAC+AGG | 0.522604 | 7.2:-23746605 | None:intergenic |
| CTCAGGTCAGTTGACGGACC+AGG | 0.527551 | 7.2:+23747497 | MS.gene54967:CDS |
| AGGCATCTGAATTGAGATCA+TGG | 0.529060 | 7.2:-23746676 | None:intergenic |
| ACGGCGCTTCTAACAGACAT+AGG | 0.529179 | 7.2:+23747666 | MS.gene54967:CDS |
| GTCCTGAGAGGTTGGTGGAG+AGG | 0.530368 | 7.2:+23745392 | MS.gene54967:CDS |
| CAGCGTACATTCCAATGTAA+AGG | 0.531532 | 7.2:-23747524 | None:intergenic |
| ACAATGCAGCCGCTAGATGA+AGG | 0.545718 | 7.2:+23747426 | MS.gene54967:CDS |
| TAAAACTTATTCGCCACTGC+GGG | 0.546545 | 7.2:+23746861 | MS.gene54967:CDS |
| ATCACTCTCAGGTCAGTTGA+CGG | 0.547777 | 7.2:+23747491 | MS.gene54967:CDS |
| TATTAGTCCTGAGAGGTTGG+TGG | 0.552035 | 7.2:+23745387 | MS.gene54967:CDS |
| CCTCGCACGACGACATCCAA+AGG | 0.564820 | 7.2:-23747710 | None:intergenic |
| TGTGAAGGGTTCACTACTGA+TGG | 0.566943 | 7.2:+23745640 | MS.gene54967:CDS |
| TGCAGTCTTGCAAGCGACTG+AGG | 0.572597 | 7.2:+23747463 | MS.gene54967:CDS |
| CTCGCACGACGACATCCAAA+GGG | 0.573327 | 7.2:-23747709 | None:intergenic |
| TTGAACTTGAGCTATGCAGC+AGG | 0.574209 | 7.2:+23746818 | MS.gene54967:CDS |
| CATGTTCTATTACCTCGTCT+GGG | 0.576513 | 7.2:-23745249 | None:intergenic |
| AAACTAAAATCAGCAAAATG+AGG | 0.583106 | 7.2:-23745451 | None:intergenic |
| TGACTTGCACTTAAGAATGG+TGG | 0.584011 | 7.2:-23746714 | None:intergenic |
| CGACTATGTATGGACTCTGT+AGG | 0.584215 | 7.2:+23747893 | MS.gene54967:CDS |
| CTACAGAGTCCATACATAGT+CGG | 0.589157 | 7.2:-23747892 | None:intergenic |
| CGGCGCTTCTAACAGACATA+GGG | 0.589191 | 7.2:+23747667 | MS.gene54967:CDS |
| ATTTGTATCGTACAGTGGCT+GGG | 0.590955 | 7.2:+23747853 | MS.gene54967:CDS |
| CTAGCGGCTGCATTGTGTCA+GGG | 0.593673 | 7.2:-23747419 | None:intergenic |
| ATTTGCTGGCGAGAGTGACA+AGG | 0.594995 | 7.2:+23747572 | MS.gene54967:CDS |
| CCTTTGGATGTCGTCGTGCG+AGG | 0.601956 | 7.2:+23747710 | MS.gene54967:CDS |
| GAAGATGCCGAGGTTGAATG+TGG | 0.604525 | 7.2:+23747764 | MS.gene54967:CDS |
| TTCCAATGTAAAGGAAGACC+TGG | 0.605826 | 7.2:-23747515 | None:intergenic |
| ATTCCCAAATCCATTAGTTG+AGG | 0.605945 | 7.2:-23746641 | None:intergenic |
| GGGAGCACTTGAGAGACTTG+TGG | 0.606863 | 7.2:+23746538 | MS.gene54967:CDS |
| CATGAATTATTTCCCAGACG+AGG | 0.613092 | 7.2:+23745237 | None:intergenic |
| GCCCCAAAACCTTCATCTAG+CGG | 0.617786 | 7.2:-23747435 | None:intergenic |
| TGAACAGGCAGATTGTTATG+TGG | 0.618273 | 7.2:+23747803 | MS.gene54967:CDS |
| GGAATGCTCTATGTATTGAA+CGG | 0.622115 | 7.2:+23747594 | MS.gene54967:CDS |
| GGTGGCCTTAAACTTAGCAT+AGG | 0.624275 | 7.2:-23746696 | None:intergenic |
| AGAAGCGCCGTGTCTCCGAA+TGG | 0.629129 | 7.2:-23747654 | None:intergenic |
| AGTCAATAACCAGTCTGTCA+GGG | 0.630329 | 7.2:+23746732 | MS.gene54967:CDS |
| AGACTGTCCATTCGGAGACA+CGG | 0.631141 | 7.2:+23747647 | MS.gene54967:CDS |
| AAGATCTCCACATTCAACCT+CGG | 0.639108 | 7.2:-23747771 | None:intergenic |
| AGCGCTGTAGTTTCCCGCAG+TGG | 0.643718 | 7.2:-23746874 | None:intergenic |
| GATGTATTTGTATCGTACAG+TGG | 0.656726 | 7.2:+23747848 | MS.gene54967:CDS |
| AAGAACGAGAAAGTAGCTCA+AGG | 0.658755 | 7.2:-23745585 | None:intergenic |
| TTTGCTGGCGAGAGTGACAA+GGG | 0.663212 | 7.2:+23747573 | MS.gene54967:CDS |
| GTTACTCTATTAGTCCTGAG+AGG | 0.667341 | 7.2:+23745380 | MS.gene54967:CDS |
| AAATTGGATAAATAGCTGCA+AGG | 0.670308 | 7.2:-23746778 | None:intergenic |
| AATGAAGTTGAAGATCACAA+AGG | 0.677519 | 7.2:+23746434 | MS.gene54967:CDS |
| TTGAAGATCACAAAGGACAG+TGG | 0.687258 | 7.2:+23746441 | MS.gene54967:CDS |
| AGTCTTGCAAGCGACTGAGG+CGG | 0.691472 | 7.2:+23747466 | MS.gene54967:CDS |
| CATTAGCTAAGAAGATGCCG+AGG | 0.696827 | 7.2:+23747754 | MS.gene54967:CDS |
| TGCCTGTCGATGCATTGCAA+AGG | 0.702269 | 7.2:+23746603 | MS.gene54967:CDS |
| ACAAAACCACCCCAACCATG+AGG | 0.706550 | 7.2:-23745478 | None:intergenic |
| ATAAAACTTATTCGCCACTG+CGG | 0.722725 | 7.2:+23746860 | MS.gene54967:CDS |
| AATTAGCAGCAACAGCAGCA+AGG | 0.730841 | 7.2:-23745663 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTGCAAATTTATATTAAT+TGG | - | chr7.2:23747000-23747019 | None:intergenic | 15.0% |
| !!! | ACTTTTTATTTCATTCTAAA+TGG | - | chr7.2:23746081-23746100 | None:intergenic | 15.0% |
| !!! | ATCAAATTTCTATTTTTTGA+TGG | + | chr7.2:23745923-23745942 | MS.gene54967:intron | 15.0% |
| !!! | ATTTGATGGTTTTTATTTTT+AGG | + | chr7.2:23745833-23745852 | MS.gene54967:intron | 15.0% |
| !!! | TATGTTTAAGAATTTGTTTT+TGG | + | chr7.2:23745757-23745776 | MS.gene54967:intron | 15.0% |
| !! | ATAATTAATGTTGCAGATAA+TGG | + | chr7.2:23747131-23747150 | MS.gene54967:intron | 20.0% |
| !! | TAAAGAATTGCAAGAATTAA+GGG | + | chr7.2:23747197-23747216 | MS.gene54967:intron | 20.0% |
| !!! | AAAAAAAAAGCACATCTATT+TGG | - | chr7.2:23746117-23746136 | None:intergenic | 20.0% |
| !!! | ATTTTTTGATGGATTTTTGT+TGG | + | chr7.2:23745934-23745953 | MS.gene54967:intron | 20.0% |
| ! | AAACTAAAATCAGCAAAATG+AGG | - | chr7.2:23745454-23745473 | None:intergenic | 25.0% |
| ! | AAAGTTAAAGATTTCAGATC+AGG | - | chr7.2:23745421-23745440 | None:intergenic | 25.0% |
| ! | AACCATCAAATCAAATTGTA+CGG | - | chr7.2:23745824-23745843 | None:intergenic | 25.0% |
| ! | CTTAAAGGCGATATTAATTT+GGG | + | chr7.2:23746518-23746537 | MS.gene54967:CDS | 25.0% |
| ! | GTAAAGAATTGCAAGAATTA+AGG | + | chr7.2:23747196-23747215 | MS.gene54967:intron | 25.0% |
| ! | GTTTGTATGTGAAAAATATC+TGG | + | chr7.2:23746265-23746284 | MS.gene54967:intron | 25.0% |
| !! | CTGAAATCTTTAACTTTGAA+GGG | + | chr7.2:23745424-23745443 | MS.gene54967:CDS | 25.0% |
| !! | TCTGAAATCTTTAACTTTGA+AGG | + | chr7.2:23745423-23745442 | MS.gene54967:CDS | 25.0% |
| !!! | TCATTTTGCTGATTTTAGTT+TGG | + | chr7.2:23745453-23745472 | MS.gene54967:CDS | 25.0% |
| !!! | TTATTTTTAGGATAGCTGTA+CGG | + | chr7.2:23745845-23745864 | MS.gene54967:intron | 25.0% |
| !!! | TTGACTTTGTTTTTACCATA+TGG | + | chr7.2:23745785-23745804 | MS.gene54967:intron | 25.0% |
| AAACGACAACTAAAACTGAA+TGG | - | chr7.2:23746952-23746971 | None:intergenic | 30.0% | |
| AAATTGGATAAATAGCTGCA+AGG | - | chr7.2:23746781-23746800 | None:intergenic | 30.0% | |
| AACCTGAATCGGATAAAATT+TGG | - | chr7.2:23747372-23747391 | None:intergenic | 30.0% | |
| AATGAAGTTGAAGATCACAA+AGG | + | chr7.2:23746434-23746453 | MS.gene54967:CDS | 30.0% | |
| ACCTGAATCGGATAAAATTT+GGG | - | chr7.2:23747371-23747390 | None:intergenic | 30.0% | |
| ATACAAACAAGATAATCCCT+AGG | - | chr7.2:23746253-23746272 | None:intergenic | 30.0% | |
| ATGTGAAAAATATCTGGTCA+GGG | + | chr7.2:23746271-23746290 | MS.gene54967:intron | 30.0% | |
| CCAAATTAATATCGCCTTTA+AGG | - | chr7.2:23746520-23746539 | None:intergenic | 30.0% | |
| CCTTAAAGGCGATATTAATT+TGG | + | chr7.2:23746517-23746536 | MS.gene54967:CDS | 30.0% | |
| TAATACCCTTGAGTATTTAC+TGG | - | chr7.2:23747102-23747121 | None:intergenic | 30.0% | |
| TATGTGAAAAATATCTGGTC+AGG | + | chr7.2:23746270-23746289 | MS.gene54967:intron | 30.0% | |
| TGTTTAACCTTAGACTCTTA+AGG | - | chr7.2:23746577-23746596 | None:intergenic | 30.0% | |
| ! | ACAAGACAAAGAGTTTTCAT+AGG | + | chr7.2:23745352-23745371 | MS.gene54967:CDS | 30.0% |
| ! | GATAAAATTTGGGCAGTTTT+TGG | - | chr7.2:23747361-23747380 | None:intergenic | 30.0% |
| ! | GTGTACTTTTATTCTCTAAC+TGG | - | chr7.2:23745979-23745998 | None:intergenic | 30.0% |
| ! | TTGTGCTTTTGTTGAAATGT+AGG | + | chr7.2:23746384-23746403 | MS.gene54967:intron | 30.0% |
| !! | AGAACATGTTTTTGACTATG+TGG | + | chr7.2:23745264-23745283 | MS.gene54967:CDS | 30.0% |
| !! | AGTTGTCGTTTACTTGTTTT+AGG | + | chr7.2:23746961-23746980 | MS.gene54967:intron | 30.0% |
| !! | ATCCGTACAATTTGATTTGA+TGG | + | chr7.2:23745819-23745838 | MS.gene54967:intron | 30.0% |
| !! | TATTGACTTGCACTTAAGAA+TGG | - | chr7.2:23746720-23746739 | None:intergenic | 30.0% |
| !! | TGTTTTTACCATATGGTGTT+TGG | + | chr7.2:23745792-23745811 | MS.gene54967:intron | 30.0% |
| !! | TTATGACTTGCAGTTTTAGT+TGG | + | chr7.2:23746217-23746236 | MS.gene54967:intron | 30.0% |
| AACCTTAGACTCTTAAGGTT+AGG | - | chr7.2:23746572-23746591 | None:intergenic | 35.0% | |
| ACTTAGTTCAGCAAAATGGT+TGG | + | chr7.2:23745997-23746016 | MS.gene54967:intron | 35.0% | |
| AGATGCCTATGCTAAGTTTA+AGG | + | chr7.2:23746691-23746710 | MS.gene54967:CDS | 35.0% | |
| AGTTCAAGGATGTTAAGTTC+TGG | - | chr7.2:23746805-23746824 | None:intergenic | 35.0% | |
| AGTTGGAAAATGTGTTCCTA+GGG | + | chr7.2:23746234-23746253 | MS.gene54967:intron | 35.0% | |
| ATAAAACTTATTCGCCACTG+CGG | + | chr7.2:23746860-23746879 | MS.gene54967:CDS | 35.0% | |
| ATGCCTACAAAACTAGACAT+AGG | - | chr7.2:23746046-23746065 | None:intergenic | 35.0% | |
| ATGTTGTCTATTGCATTTGC+TGG | + | chr7.2:23747558-23747577 | MS.gene54967:CDS | 35.0% | |
| ATTCCCAAATCCATTAGTTG+AGG | - | chr7.2:23746644-23746663 | None:intergenic | 35.0% | |
| CAAGGATACATAACCTGAAT+CGG | - | chr7.2:23747383-23747402 | None:intergenic | 35.0% | |
| CAGATTGTTATGTGGAAGAT+GGG | + | chr7.2:23747811-23747830 | MS.gene54967:CDS | 35.0% | |
| CTTAATTTCGCTTGCCTTAA+AGG | + | chr7.2:23746503-23746522 | MS.gene54967:CDS | 35.0% | |
| GATGTATTTGTATCGTACAG+TGG | + | chr7.2:23747848-23747867 | MS.gene54967:CDS | 35.0% | |
| GGAATGCTCTATGTATTGAA+CGG | + | chr7.2:23747594-23747613 | MS.gene54967:CDS | 35.0% | |
| GGATAAATCCAAACACCATA+TGG | - | chr7.2:23745803-23745822 | None:intergenic | 35.0% | |
| GTACACTTAGTTCAGCAAAA+TGG | + | chr7.2:23745993-23746012 | MS.gene54967:intron | 35.0% | |
| GTTGAAATGTAGGTCTCTTA+GGG | + | chr7.2:23746394-23746413 | MS.gene54967:intron | 35.0% | |
| TAAATAGCTGCAAGGCTAAA+AGG | - | chr7.2:23746773-23746792 | None:intergenic | 35.0% | |
| TAGTTCTTGTTAGCTGTGAA+GGG | + | chr7.2:23745626-23745645 | MS.gene54967:CDS | 35.0% | |
| TAGTTGGAAAATGTGTTCCT+AGG | + | chr7.2:23746233-23746252 | MS.gene54967:intron | 35.0% | |
| TCTCTCCAGTAAATACTCAA+GGG | + | chr7.2:23747094-23747113 | MS.gene54967:intron | 35.0% | |
| TGACAGAAACTCTTTGTCTT+TGG | + | chr7.2:23745297-23745316 | MS.gene54967:CDS | 35.0% | |
| TGCCTACAAAACTAGACATA+GGG | - | chr7.2:23746045-23746064 | None:intergenic | 35.0% | |
| TGCTTGTGTTACATTTCAGA+GGG | + | chr7.2:23746138-23746157 | MS.gene54967:intron | 35.0% | |
| TGGATGCTGTAACAAGTAAA+AGG | - | chr7.2:23746932-23746951 | None:intergenic | 35.0% | |
| TGTCTTTGGTATGCAAAAGT+TGG | + | chr7.2:23745311-23745330 | MS.gene54967:CDS | 35.0% | |
| TGTTGAAATGTAGGTCTCTT+AGG | + | chr7.2:23746393-23746412 | MS.gene54967:intron | 35.0% | |
| TTGCTTGTGTTACATTTCAG+AGG | + | chr7.2:23746137-23746156 | MS.gene54967:intron | 35.0% | |
| ! | GATGTTAAGTTCTGGCAAAT+TGG | - | chr7.2:23746797-23746816 | None:intergenic | 35.0% |
| ! | TATCGCTACAAGTCCTTTTT+CGG | - | chr7.2:23747262-23747281 | None:intergenic | 35.0% |
| ! | TGAAGCACTTGCTAAGAATA+AGG | + | chr7.2:23745513-23745532 | MS.gene54967:CDS | 35.0% |
| ! | TGCTAAGAATAAGGTTGGTT+TGG | + | chr7.2:23745522-23745541 | MS.gene54967:CDS | 35.0% |
| ! | TTAGTTCTTGTTAGCTGTGA+AGG | + | chr7.2:23745625-23745644 | MS.gene54967:CDS | 35.0% |
| !! | CAACTAATGGATTTGGGAAT+TGG | + | chr7.2:23746644-23746663 | MS.gene54967:CDS | 35.0% |
| !! | TAAGAATAAGGTTGGTTTGG+AGG | + | chr7.2:23745525-23745544 | MS.gene54967:CDS | 35.0% |
| !!! | GATTTTAGTTTGGTTCCTCA+TGG | + | chr7.2:23745463-23745482 | MS.gene54967:CDS | 35.0% |
| !!! | TACCCTATGTCTAGTTTTGT+AGG | + | chr7.2:23746040-23746059 | MS.gene54967:intron | 35.0% |
| AAAGCACAAGCCATTCGATA+TGG | - | chr7.2:23746373-23746392 | None:intergenic | 40.0% | |
| AAGAACGAGAAAGTAGCTCA+AGG | - | chr7.2:23745588-23745607 | None:intergenic | 40.0% | |
| AAGATCTCCACATTCAACCT+CGG | - | chr7.2:23747774-23747793 | None:intergenic | 40.0% | |
| AAGCACAAGCCATTCGATAT+GGG | - | chr7.2:23746372-23746391 | None:intergenic | 40.0% | |
| AAGTCAATAACCAGTCTGTC+AGG | + | chr7.2:23746731-23746750 | MS.gene54967:CDS | 40.0% | |
| ACATGTTCTATTACCTCGTC+TGG | - | chr7.2:23745253-23745272 | None:intergenic | 40.0% | |
| AGAGAGAGCAATAAGTGGAT+TGG | - | chr7.2:23747079-23747098 | None:intergenic | 40.0% | |
| AGGACTTGTAGCGATATCAA+TGG | + | chr7.2:23747266-23747285 | MS.gene54967:intron | 40.0% | |
| AGGCATCTGAATTGAGATCA+TGG | - | chr7.2:23746679-23746698 | None:intergenic | 40.0% | |
| AGTCAATAACCAGTCTGTCA+GGG | + | chr7.2:23746732-23746751 | MS.gene54967:CDS | 40.0% | |
| ATGAAACAATGCGATCCCTT+TGG | + | chr7.2:23747694-23747713 | MS.gene54967:CDS | 40.0% | |
| ATTTGTATCGTACAGTGGCT+GGG | + | chr7.2:23747853-23747872 | MS.gene54967:CDS | 40.0% | |
| CAGCGTACATTCCAATGTAA+AGG | - | chr7.2:23747527-23747546 | None:intergenic | 40.0% | |
| CATGTTCTATTACCTCGTCT+GGG | - | chr7.2:23745252-23745271 | None:intergenic | 40.0% | |
| CTACAGAGTCCATACATAGT+CGG | - | chr7.2:23747895-23747914 | None:intergenic | 40.0% | |
| CTCCTAACCTTAAGAGTCTA+AGG | + | chr7.2:23746567-23746586 | MS.gene54967:CDS | 40.0% | |
| CTCTCTCCAGTAAATACTCA+AGG | + | chr7.2:23747093-23747112 | MS.gene54967:intron | 40.0% | |
| CTTCAACTTCATTCTCTTGC+AGG | - | chr7.2:23746427-23746446 | None:intergenic | 40.0% | |
| GACAGAAGTAGAGTAATGAG+TGG | - | chr7.2:23747305-23747324 | None:intergenic | 40.0% | |
| GAGATTAGAGACTGTCCATT+CGG | + | chr7.2:23747639-23747658 | MS.gene54967:CDS | 40.0% | |
| GATCTTCAGTGAAAGTGAAC+AGG | + | chr7.2:23747788-23747807 | MS.gene54967:CDS | 40.0% | |
| GCAAAATGGTTGGATGACTT+TGG | + | chr7.2:23746007-23746026 | MS.gene54967:intron | 40.0% | |
| GCAGATTGTTATGTGGAAGA+TGG | + | chr7.2:23747810-23747829 | MS.gene54967:CDS | 40.0% | |
| GGACTTGTAGCGATATCAAT+GGG | + | chr7.2:23747267-23747286 | MS.gene54967:intron | 40.0% | |
| GTTACTCTATTAGTCCTGAG+AGG | + | chr7.2:23745380-23745399 | MS.gene54967:CDS | 40.0% | |
| TAAAACTTATTCGCCACTGC+GGG | + | chr7.2:23746861-23746880 | MS.gene54967:CDS | 40.0% | |
| TACAGAGTCCATACATAGTC+GGG | - | chr7.2:23747894-23747913 | None:intergenic | 40.0% | |
| TACTGTTATGAGAGCAGCAT+TGG | - | chr7.2:23747337-23747356 | None:intergenic | 40.0% | |
| TAGAGTAATGAGTGGAGCTT+AGG | - | chr7.2:23747297-23747316 | None:intergenic | 40.0% | |
| TATTTGTATCGTACAGTGGC+TGG | + | chr7.2:23747852-23747871 | MS.gene54967:CDS | 40.0% | |
| TGAACAGGCAGATTGTTATG+TGG | + | chr7.2:23747803-23747822 | MS.gene54967:CDS | 40.0% | |
| TTAGCAAGTGCTTCAATCCA+TGG | - | chr7.2:23745508-23745527 | None:intergenic | 40.0% | |
| TTCCAATGTAAAGGAAGACC+TGG | - | chr7.2:23747518-23747537 | None:intergenic | 40.0% | |
| TTGAAGATCACAAAGGACAG+TGG | + | chr7.2:23746441-23746460 | MS.gene54967:CDS | 40.0% | |
| ! | GCACTTGCTAAGAATAAGGT+TGG | + | chr7.2:23745517-23745536 | MS.gene54967:CDS | 40.0% |
| ! | GCCCAAATTTTATCCGATTC+AGG | + | chr7.2:23747367-23747386 | MS.gene54967:CDS | 40.0% |
| ! | TAGTTTGGTTCCTCATGGTT+GGG | + | chr7.2:23745468-23745487 | MS.gene54967:CDS | 40.0% |
| ! | TGACTTGCACTTAAGAATGG+TGG | - | chr7.2:23746717-23746736 | None:intergenic | 40.0% |
| ! | TTAGTTTGGTTCCTCATGGT+TGG | + | chr7.2:23745467-23745486 | MS.gene54967:CDS | 40.0% |
| !! | AGCACCTCAACTAATGGATT+TGG | + | chr7.2:23746637-23746656 | MS.gene54967:CDS | 40.0% |
| !! | GCACCTCAACTAATGGATTT+GGG | + | chr7.2:23746638-23746657 | MS.gene54967:CDS | 40.0% |
| !! | TTGCAGATAATGGATCGCAT+TGG | + | chr7.2:23747141-23747160 | MS.gene54967:intron | 40.0% |
| AAGATGCACCCGACTATGTA+TGG | + | chr7.2:23747883-23747902 | MS.gene54967:CDS | 45.0% | |
| AATGCGAGCACCTCAACTAA+TGG | + | chr7.2:23746631-23746650 | MS.gene54967:CDS | 45.0% | |
| AATGGATCGCATTGGAGACT+TGG | + | chr7.2:23747149-23747168 | MS.gene54967:intron | 45.0% | |
| AATTAGCAGCAACAGCAGCA+AGG | - | chr7.2:23745666-23745685 | None:intergenic | 45.0% | |
| ACAAGTGATGTGCAGCTTTC+TGG | - | chr7.2:23746479-23746498 | None:intergenic | 45.0% | |
| ACAGCTGCTTGGTTTCCAAA+TGG | - | chr7.2:23747237-23747256 | None:intergenic | 45.0% | |
| ACTGGAGAGAGAGCAATAAG+TGG | - | chr7.2:23747084-23747103 | None:intergenic | 45.0% | |
| ATCACTCTCAGGTCAGTTGA+CGG | + | chr7.2:23747491-23747510 | MS.gene54967:CDS | 45.0% | |
| ATGGATCGCATTGGAGACTT+GGG | + | chr7.2:23747150-23747169 | MS.gene54967:intron | 45.0% | |
| CAAGCAGCTGTTACCGAAAA+AGG | + | chr7.2:23747246-23747265 | MS.gene54967:intron | 45.0% | |
| CATTAGCTAAGAAGATGCCG+AGG | + | chr7.2:23747754-23747773 | MS.gene54967:CDS | 45.0% | |
| CTCTATTAGTCCTGAGAGGT+TGG | + | chr7.2:23745384-23745403 | MS.gene54967:CDS | 45.0% | |
| GACCAGGTCTTCCTTTACAT+TGG | + | chr7.2:23747513-23747532 | MS.gene54967:CDS | 45.0% | |
| GGTTTCCAAATGGAGCTGAT+GGG | - | chr7.2:23747227-23747246 | None:intergenic | 45.0% | |
| TATTAGTCCTGAGAGGTTGG+TGG | + | chr7.2:23745387-23745406 | MS.gene54967:CDS | 45.0% | |
| TCTTGACCTCCCATATCGAA+TGG | + | chr7.2:23746360-23746379 | MS.gene54967:intron | 45.0% | |
| TGCTGCATAGCTCAAGTTCA+AGG | - | chr7.2:23746819-23746838 | None:intergenic | 45.0% | |
| TGGTTTCCAAATGGAGCTGA+TGG | - | chr7.2:23747228-23747247 | None:intergenic | 45.0% | |
| TGTGAAGGGTTCACTACTGA+TGG | + | chr7.2:23745640-23745659 | MS.gene54967:CDS | 45.0% | |
| TTCCAAAAACCCTGACAGAC+TGG | - | chr7.2:23746744-23746763 | None:intergenic | 45.0% | |
| TTGAACTTGAGCTATGCAGC+AGG | + | chr7.2:23746818-23746837 | MS.gene54967:CDS | 45.0% | |
| ! | AACCAGTCTGTCAGGGTTTT+TGG | + | chr7.2:23746739-23746758 | MS.gene54967:CDS | 45.0% |
| ! | AGCCGCTAGATGAAGGTTTT+GGG | + | chr7.2:23747433-23747452 | MS.gene54967:CDS | 45.0% |
| ! | AGTTTGGTTCCTCATGGTTG+GGG | + | chr7.2:23745469-23745488 | MS.gene54967:CDS | 45.0% |
| ! | ATCCTTTGCAATGCATCGAC+AGG | - | chr7.2:23746608-23746627 | None:intergenic | 45.0% |
| ! | GGTGGCCTTAAACTTAGCAT+AGG | - | chr7.2:23746699-23746718 | None:intergenic | 45.0% |
| ! | GTTTTCCCATCAGCTCCATT+TGG | + | chr7.2:23747219-23747238 | MS.gene54967:intron | 45.0% |
| !! | AGGTTGGTTTGGAGGAACTT+AGG | + | chr7.2:23745533-23745552 | MS.gene54967:CDS | 45.0% |
| !! | GGAACTTAGGTTGAAGAGGA+TGG | + | chr7.2:23745546-23745565 | MS.gene54967:CDS | 45.0% |
| !! | TCTGTCAGGGTTTTTGGAAG+TGG | + | chr7.2:23746745-23746764 | MS.gene54967:CDS | 45.0% |
| !! | TGGAGGAACTTAGGTTGAAG+AGG | + | chr7.2:23745542-23745561 | MS.gene54967:CDS | 45.0% |
| !!! | CTTTTTCGGTAACAGCTGCT+TGG | - | chr7.2:23747248-23747267 | None:intergenic | 45.0% |
| !!! | GGGGTGGTTTTGTTTATCCA+TGG | + | chr7.2:23745488-23745507 | MS.gene54967:CDS | 45.0% |
| ACAAAACCACCCCAACCATG+AGG | - | chr7.2:23745481-23745500 | None:intergenic | 50.0% | |
| ACAATGCAGCCGCTAGATGA+AGG | + | chr7.2:23747426-23747445 | MS.gene54967:CDS | 50.0% | |
| ACGGCGCTTCTAACAGACAT+AGG | + | chr7.2:23747666-23747685 | MS.gene54967:CDS | 50.0% | |
| AGACTGTCCATTCGGAGACA+CGG | + | chr7.2:23747647-23747666 | MS.gene54967:CDS | 50.0% | |
| AGCTATGCAGCAGGCATTCT+GGG | + | chr7.2:23746827-23746846 | MS.gene54967:CDS | 50.0% | |
| ATCGTACAGTGGCTGGGAAA+AGG | + | chr7.2:23747859-23747878 | MS.gene54967:CDS | 50.0% | |
| CACAAGCCATTCGATATGGG+AGG | - | chr7.2:23746369-23746388 | None:intergenic | 50.0% | |
| CGGCGCTTCTAACAGACATA+GGG | + | chr7.2:23747667-23747686 | MS.gene54967:CDS | 50.0% | |
| CGGGAAACTACAGCGCTTAT+GGG | + | chr7.2:23746880-23746899 | MS.gene54967:CDS | 50.0% | |
| CTGCTGTTGCTGCTAATTGC+AGG | + | chr7.2:23745668-23745687 | MS.gene54967:CDS | 50.0% | |
| GAAGATGCCGAGGTTGAATG+TGG | + | chr7.2:23747764-23747783 | MS.gene54967:CDS | 50.0% | |
| GCCCCAAAACCTTCATCTAG+CGG | - | chr7.2:23747438-23747457 | None:intergenic | 50.0% | |
| TCGTACAGTGGCTGGGAAAA+GGG | + | chr7.2:23747860-23747879 | MS.gene54967:CDS | 50.0% | |
| TGCCTGTCGATGCATTGCAA+AGG | + | chr7.2:23746603-23746622 | MS.gene54967:CDS | 50.0% | |
| TTTGCTGGCGAGAGTGACAA+GGG | + | chr7.2:23747573-23747592 | MS.gene54967:CDS | 50.0% | |
| ! | ATTTGCTGGCGAGAGTGACA+AGG | + | chr7.2:23747572-23747591 | MS.gene54967:CDS | 50.0% |
| ! | CAGCCGCTAGATGAAGGTTT+TGG | + | chr7.2:23747432-23747451 | MS.gene54967:CDS | 50.0% |
| ! | GCCGCTAGATGAAGGTTTTG+GGG | + | chr7.2:23747434-23747453 | MS.gene54967:CDS | 50.0% |
| !! | TGAGAGCAGCATTGGTCATC+TGG | - | chr7.2:23747329-23747348 | None:intergenic | 50.0% |
| !!! | GGTCAGGTTTTGTTGCGTCA+AGG | - | chr7.2:23747401-23747420 | None:intergenic | 50.0% |
| AACCTCTCCACCAACCTCTC+AGG | - | chr7.2:23745397-23745416 | None:intergenic | 55.0% | |
| AGTCTTGCAAGCGACTGAGG+CGG | + | chr7.2:23747466-23747485 | MS.gene54967:CDS | 55.0% | |
| CGCATTGGAGACTTGGGACT+AGG | + | chr7.2:23747156-23747175 | MS.gene54967:intron | 55.0% | |
| CTAGCGGCTGCATTGTGTCA+GGG | - | chr7.2:23747422-23747441 | None:intergenic | 55.0% | |
| CTCGCACGACGACATCCAAA+GGG | - | chr7.2:23747712-23747731 | None:intergenic | 55.0% | |
| GAGCTATGCAGCAGGCATTC+TGG | + | chr7.2:23746826-23746845 | MS.gene54967:CDS | 55.0% | |
| GCGGGAAACTACAGCGCTTA+TGG | + | chr7.2:23746879-23746898 | MS.gene54967:CDS | 55.0% | |
| TCTAGCGGCTGCATTGTGTC+AGG | - | chr7.2:23747423-23747442 | None:intergenic | 55.0% | |
| TGCAGTCTTGCAAGCGACTG+AGG | + | chr7.2:23747463-23747482 | MS.gene54967:CDS | 55.0% | |
| TGTGGAAGATGGGCAGAGAG+TGG | + | chr7.2:23747821-23747840 | MS.gene54967:CDS | 55.0% | |
| TTGGTTCCTCATGGTTGGGG+TGG | + | chr7.2:23745472-23745491 | MS.gene54967:CDS | 55.0% | |
| !! | GGGAGCACTTGAGAGACTTG+TGG | + | chr7.2:23746538-23746557 | MS.gene54967:CDS | 55.0% |
| AGCGCTGTAGTTTCCCGCAG+TGG | - | chr7.2:23746877-23746896 | None:intergenic | 60.0% | |
| CCTCGCACGACGACATCCAA+AGG | - | chr7.2:23747713-23747732 | None:intergenic | 60.0% | |
| CCTTTGGATGTCGTCGTGCG+AGG | + | chr7.2:23747710-23747729 | MS.gene54967:CDS | 60.0% | |
| CTGAGGCGGCTATCACTCTC+AGG | + | chr7.2:23747480-23747499 | MS.gene54967:CDS | 60.0% | |
| GGCTGCATTGTGTCAGGGTC+AGG | - | chr7.2:23747417-23747436 | None:intergenic | 60.0% | |
| ! | CTCAGGTCAGTTGACGGACC+AGG | + | chr7.2:23747497-23747516 | MS.gene54967:CDS | 60.0% |
| !! | AGAAGCGCCGTGTCTCCGAA+TGG | - | chr7.2:23747657-23747676 | None:intergenic | 60.0% |
| !! | GTCCTGAGAGGTTGGTGGAG+AGG | + | chr7.2:23745392-23745411 | MS.gene54967:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 23745238 | 23747914 | 23745238 | ID=MS.gene54967 |
| chr7.2 | mRNA | 23745238 | 23747914 | 23745238 | ID=MS.gene54967.t1;Parent=MS.gene54967 |
| chr7.2 | exon | 23745238 | 23745689 | 23745238 | ID=MS.gene54967.t1.exon1;Parent=MS.gene54967.t1 |
| chr7.2 | CDS | 23745238 | 23745689 | 23745238 | ID=cds.MS.gene54967.t1;Parent=MS.gene54967.t1 |
| chr7.2 | exon | 23746406 | 23746901 | 23746406 | ID=MS.gene54967.t1.exon2;Parent=MS.gene54967.t1 |
| chr7.2 | CDS | 23746406 | 23746901 | 23746406 | ID=cds.MS.gene54967.t1;Parent=MS.gene54967.t1 |
| chr7.2 | exon | 23747330 | 23747914 | 23747330 | ID=MS.gene54967.t1.exon3;Parent=MS.gene54967.t1 |
| chr7.2 | CDS | 23747330 | 23747914 | 23747330 | ID=cds.MS.gene54967.t1;Parent=MS.gene54967.t1 |
| Gene Sequence |
| Protein sequence |
