AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51554


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51554.t1 MTR_1g012020 94.960 873 37 4 1 872 1 867 0.0 1640
MS.gene51554.t1 MTR_5g006530 29.009 686 374 23 37 666 21 649 6.51e-61 221
MS.gene51554.t1 MTR_5g006530 48.404 188 94 3 480 666 240 425 1.98e-50 187
MS.gene51554.t1 MTR_1g080640 62.500 96 34 1 429 524 5 98 2.59e-30 115
MS.gene51554.t1 MTR_8g095100 61.458 96 35 1 429 524 5 98 4.05e-30 115
MS.gene51554.t1 MTR_8g103320 41.040 173 90 6 476 642 52 218 1.90e-29 123
MS.gene51554.t1 MTR_1g101580 60.417 96 36 1 429 524 5 98 4.33e-29 112
MS.gene51554.t1 MTR_1g073270 60.417 96 36 1 429 524 5 98 5.36e-29 111
MS.gene51554.t1 MTR_2g049090 56.481 108 35 2 429 524 5 112 5.92e-29 112
MS.gene51554.t1 MTR_6g087590 47.727 132 60 3 503 631 128 253 1.27e-28 122
MS.gene51554.t1 MTR_3g110122 38.172 186 106 5 446 628 90 269 2.18e-28 121
MS.gene51554.t1 MTR_6g071120 49.612 129 39 2 396 524 1 103 5.38e-28 108
MS.gene51554.t1 MTR_1g027430 82.258 62 11 0 429 490 5 66 1.63e-27 107
MS.gene51554.t1 MTR_1g012000 90.909 55 5 0 38 92 9 63 2.41e-27 106
MS.gene51554.t1 MTR_4g076830 64.286 84 22 1 429 504 5 88 1.50e-26 104
MS.gene51554.t1 MTR_7g022680 80.645 62 12 0 429 490 5 66 1.78e-26 103
MS.gene51554.t1 MTR_0181s0060 55.670 97 31 2 436 520 35 131 1.07e-23 98.2
MS.gene51554.t1 MTR_4g010860 67.089 79 23 1 429 504 6 84 1.97e-23 95.5
MS.gene51554.t1 MTR_1g103230 41.322 121 69 1 511 631 446 564 6.14e-23 104
MS.gene51554.t1 MTR_5g011530 58.750 80 25 1 433 504 43 122 5.91e-20 87.0
MS.gene51554.t1 MTR_8g015660 75.806 62 13 1 429 490 9 68 1.19e-19 94.0
MS.gene51554.t1 MTR_1g011990 69.565 69 8 2 264 323 46 110 1.24e-18 91.7
MS.gene51554.t1 MTR_2g036100 47.170 106 22 2 429 524 5 86 3.52e-18 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51554.t1 AT3G22780 33.515 549 241 23 317 850 254 693 1.20e-61 222
MS.gene51554.t1 AT3G22760 39.812 319 139 10 325 643 77 342 1.83e-52 191
MS.gene51554.t1 AT3G22760 39.812 319 139 10 325 643 200 465 9.78e-52 192
MS.gene51554.t1 AT4G14770 38.636 308 138 8 324 631 245 501 3.40e-50 189
MS.gene51554.t1 AT4G14770 27.976 336 180 13 570 850 344 672 1.10e-14 79.0
MS.gene51554.t1 AT4G14770 38.636 308 138 8 324 631 226 482 3.57e-50 188
MS.gene51554.t1 AT4G14770 27.976 336 180 13 570 850 325 653 1.10e-14 78.6
MS.gene51554.t1 AT4G14770 38.636 308 138 8 324 631 225 481 3.65e-50 188
MS.gene51554.t1 AT4G14770 27.976 336 180 13 570 850 324 652 1.15e-14 78.6
MS.gene51554.t1 AT3G04850 32.857 350 167 10 303 628 271 576 3.97e-45 173
MS.gene51554.t1 AT5G25790 43.750 160 77 7 485 640 74 224 2.33e-30 125
MS.gene51554.t1 AT5G25790 40.437 183 90 7 464 640 59 228 3.22e-30 125
MS.gene51554.t1 AT5G25790 40.437 183 90 7 464 640 59 228 3.64e-30 126
MS.gene51554.t1 AT2G20110 46.099 141 67 4 503 639 119 254 5.20e-30 126
MS.gene51554.t1 AT2G20110 46.099 141 67 4 503 639 119 254 5.56e-30 126
MS.gene51554.t1 AT2G20110 46.099 141 67 4 503 639 119 254 9.57e-30 125
MS.gene51554.t1 AT4G29000 44.366 142 68 5 503 639 132 267 5.94e-28 120
MS.gene51554.t1 AT3G16160 46.774 124 60 3 503 626 66 183 9.35e-25 107

Find 208 sgRNAs with CRISPR-Local

Find 391 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGTAGATTGTTCCATTTC+TGG 0.116107 1.4:-8666938 None:intergenic
CGTAGACGCTGCCTACAATT+TGG 0.186201 1.4:+8668369 MS.gene51554:CDS
TGCGGTATTCGCCAGTTATC+TGG 0.216353 1.4:+8670895 MS.gene51554:CDS
GAAGCCTTGACAGGCTTTAT+TGG 0.243588 1.4:-8666487 None:intergenic
AGCATCTGTCGATGAATATT+TGG 0.259084 1.4:+8666880 MS.gene51554:CDS
ATGTTTCTGTATCTGATAAA+TGG 0.260838 1.4:-8666703 None:intergenic
GTGGAGGAGAAACTCTCTTT+TGG 0.268257 1.4:-8671077 None:intergenic
TTCTCCCCTTCAATTGTTGC+AGG 0.272545 1.4:-8667112 None:intergenic
TGGTAACAGAGTAGAATTTC+AGG 0.294634 1.4:+8669150 MS.gene51554:CDS
ATGCAAACTTATAGAAGATT+TGG 0.296279 1.4:-8668589 None:intergenic
GAAGCTGCTTCCGTTGTTCT+TGG 0.299878 1.4:+8668393 MS.gene51554:CDS
CATTGCAACAATGGTGTTAC+AGG 0.307892 1.4:-8670566 None:intergenic
TTCTTAATCTGAGAAGCTTC+TGG 0.309298 1.4:-8665416 None:intergenic
GTAGACGCTGCCTACAATTT+GGG 0.311899 1.4:+8668370 MS.gene51554:CDS
CTCTTATCAGGTGCATTTGC+CGG 0.312680 1.4:-8668768 None:intergenic
TTCTATAAGTTTGCATATAG+TGG 0.322912 1.4:+8668596 MS.gene51554:CDS
CAGTAGATTGTTCCATTTCT+GGG 0.324248 1.4:-8666937 None:intergenic
CATGCGACACATGGGTTTCT+CGG 0.326256 1.4:+8666511 MS.gene51554:CDS
TTTGTTGGAGGAATCTAATA+TGG 0.332408 1.4:+8667057 MS.gene51554:CDS
ATGCTGGAGGACTGCAGCTT+TGG 0.334347 1.4:-8666862 None:intergenic
ATCCTCAACTCCGTCCAATA+TGG 0.338930 1.4:+8668632 MS.gene51554:CDS
TGATGTTCCACTGAATAATA+TGG 0.341118 1.4:+8669252 MS.gene51554:CDS
TTGCAATGGCAATGAGGATT+CGG 0.342240 1.4:+8671221 MS.gene51554:CDS
CTGGCGAATACCGCATCTAT+TGG 0.354125 1.4:-8670887 None:intergenic
GGGCGTACCCTCCTCTTATC+AGG 0.364892 1.4:-8668780 None:intergenic
TGCAGTTACTGTGATTGTTT+TGG 0.366597 1.4:+8669085 MS.gene51554:intron
AAGTTATATTAAAATTTGAT+AGG 0.367397 1.4:+8666996 MS.gene51554:CDS
AGCAAATGCTTGTGGATTAC+GGG 0.369212 1.4:-8669206 None:intergenic
AGTGTTGACAAATCTCAAAA+AGG 0.377839 1.4:-8666458 None:intergenic
AAAAGATTGATCATCCATAT+TGG 0.378531 1.4:-8668646 None:intergenic
TGCTGGAGGACTGCAGCTTT+GGG 0.380011 1.4:-8666861 None:intergenic
AGCTGCACATGGTACAATCT+TGG 0.387960 1.4:-8669230 None:intergenic
ATTTGCTTTCACAGACTTGA+TGG 0.391070 1.4:-8671046 None:intergenic
GAGCAAATGCTTGTGGATTA+CGG 0.393901 1.4:-8669207 None:intergenic
GTTTATAACAGTTGCTCAAA+AGG 0.394683 1.4:+8666811 MS.gene51554:CDS
CTACTGAAGCATCAGTTTCA+TGG 0.398320 1.4:-8668689 None:intergenic
TGCAATGGCAATGAGGATTC+GGG 0.411133 1.4:+8671222 MS.gene51554:CDS
AAGTTAGCGCTTGGGGTAAT+CGG 0.415030 1.4:-8670946 None:intergenic
GACAGAAAATTGTGACAATC+AGG 0.415519 1.4:+8670510 MS.gene51554:CDS
CAACCCAATGCCTGGTGGCT+TGG 0.420396 1.4:-8668484 None:intergenic
GCGGTATTCGCCAGTTATCT+GGG 0.421949 1.4:+8670896 MS.gene51554:CDS
GAGATTATCAGATGGTATAC+AGG 0.422125 1.4:+8668563 MS.gene51554:CDS
AGTTCTTCTGCTATGTTACT+AGG 0.425346 1.4:-8667028 None:intergenic
CATCATCTAAGTTAGCGCTT+GGG 0.426755 1.4:-8670954 None:intergenic
TGTTCCATTTCTGGGTTGAC+TGG 0.428222 1.4:-8666929 None:intergenic
TGATCCTATCCAGGCTGTTA+AGG 0.432469 1.4:+8667422 MS.gene51554:CDS
CCTAGTTGTGCTTCAACTAC+TGG 0.434056 1.4:+8668537 MS.gene51554:CDS
GAAAATCCTGCAACAATTGA+AGG 0.434474 1.4:+8667106 MS.gene51554:CDS
ACTTTGCACCCTGCTTGCCT+TGG 0.435412 1.4:-8670714 None:intergenic
AATGATGTATACTTGAACTT+GGG 0.435796 1.4:-8665513 None:intergenic
CGGATTGGATCAAGCTCCTC+AGG 0.435804 1.4:+8671114 MS.gene51554:CDS
GCTAACGTTGGATGCTCGAC+TGG 0.440058 1.4:+8669546 MS.gene51554:CDS
GTATCCAGTCAACCCAGAAA+TGG 0.441055 1.4:+8666925 MS.gene51554:CDS
TGTTTCTGTATCTGATAAAT+GGG 0.441713 1.4:-8666702 None:intergenic
GAAGCTTCCTTCAATACATC+AGG 0.449228 1.4:-8671018 None:intergenic
CGAGTATTGTGTTTCACGGT+GGG 0.450483 1.4:-8666581 None:intergenic
GATGGATGTATGAATGTCTT+TGG 0.451729 1.4:+8669579 MS.gene51554:CDS
TGAAACACCTGATGTATTGA+AGG 0.458665 1.4:+8671011 MS.gene51554:CDS
TTCTTACAGTTGCACGTCTT+AGG 0.458861 1.4:-8668967 None:intergenic
TTTGTATGTATCAGGCTTGA+AGG 0.461411 1.4:+8666677 MS.gene51554:intron
TCATCATCTAAGTTAGCGCT+TGG 0.462532 1.4:-8670955 None:intergenic
TTTCCAAGCCACCAGGCATT+GGG 0.462604 1.4:+8668481 MS.gene51554:CDS
GTTTCCAAGCCACCAGGCAT+TGG 0.462633 1.4:+8668480 MS.gene51554:CDS
TCGATGGATTCTGTCAAGAT+AGG 0.463592 1.4:-8668738 None:intergenic
TACGGATGCCATGATACTTT+AGG 0.463804 1.4:-8668350 None:intergenic
TTTCAAATTCCTTAACAGCC+TGG 0.465100 1.4:-8667431 None:intergenic
AAATATTCATCGACAGATGC+TGG 0.465549 1.4:-8666878 None:intergenic
AGGATTGGTGATGGCGGTGG+CGG 0.467054 1.4:-8665477 None:intergenic
TTGATCCAATCCGAAGTAGA+TGG 0.467929 1.4:-8671104 None:intergenic
GCTGCACATGGTACAATCTT+GGG 0.476181 1.4:-8669229 None:intergenic
TTTCCGAGTATTGTGTTTCA+CGG 0.478137 1.4:-8666585 None:intergenic
AAGCAGCTTCCCCAAATTGT+AGG 0.478821 1.4:-8668380 None:intergenic
AATTTCAAGCTTCAGTGTGC+AGG 0.480226 1.4:+8667354 MS.gene51554:intron
GGGGTCAACGGCGGGAATGA+AGG 0.482884 1.4:-8671177 None:intergenic
CAGCGCAAGGGGTCAACGGC+GGG 0.483041 1.4:-8671185 None:intergenic
CTAATATGGTTCATCAAGAA+AGG 0.485151 1.4:+8667071 MS.gene51554:CDS
GTTGAATTCCTCAGCATCTG+TGG 0.485615 1.4:-8668802 None:intergenic
ATAAACTTAGGCTCGAGTTC+AGG 0.487680 1.4:+8667166 MS.gene51554:CDS
AGAATCCATCGACCTATATC+CGG 0.490265 1.4:+8668749 MS.gene51554:CDS
TTAACAGCCTGGATAGGATC+AGG 0.491802 1.4:-8667420 None:intergenic
CAACATTGTTGAAGAAGGGT+TGG 0.492695 1.4:+8670469 MS.gene51554:CDS
TTTGTCCAGCCAAGGCAAGC+AGG 0.495977 1.4:+8670705 MS.gene51554:intron
TTGCCATGATTCACTTCCCC+AGG 0.497451 1.4:+8667213 MS.gene51554:CDS
GAGAGCAACATTGTTGAAGA+AGG 0.497547 1.4:+8670464 MS.gene51554:CDS
TCTCAAGAGCACATAAACTT+AGG 0.497807 1.4:+8667154 MS.gene51554:CDS
AAATGATGTATACTTGAACT+TGG 0.498024 1.4:-8665514 None:intergenic
ACAGGTGAGAGGTGATTTGC+TGG 0.503058 1.4:-8670548 None:intergenic
CGGCAAATGCACCTGATAAG+AGG 0.504086 1.4:+8668769 MS.gene51554:CDS
AAAGAGGTTGCAATTGCAAA+AGG 0.504487 1.4:+8669394 MS.gene51554:CDS
AACAATCTACTGATGCGGTT+GGG 0.512016 1.4:+8666948 MS.gene51554:CDS
ATTGATGCCTGATCCTATCC+AGG 0.512947 1.4:+8667413 MS.gene51554:CDS
CAAATTGTAGGCAGCGTCTA+CGG 0.518260 1.4:-8668368 None:intergenic
ATCATCTAAGTTAGCGCTTG+GGG 0.519646 1.4:-8670953 None:intergenic
GAACAATCTACTGATGCGGT+TGG 0.524575 1.4:+8666947 MS.gene51554:CDS
TACCGCATCTATTGGAGAGT+TGG 0.524893 1.4:-8670879 None:intergenic
TGAATATTTGGCTGATCCCG+TGG 0.525204 1.4:+8666892 MS.gene51554:CDS
TTGTCCAGCCAAGGCAAGCA+GGG 0.526069 1.4:+8670706 MS.gene51554:intron
TTTAAATGCAACCCAATGCC+TGG 0.526474 1.4:-8668492 None:intergenic
GGGTATTCGCATCATTCTTG+AGG 0.527259 1.4:-8666841 None:intergenic
TCCTCAGGTGGCTTGAAAAG+TGG 0.529192 1.4:+8671129 MS.gene51554:CDS
ATATTAGATTCCTCCAACAA+AGG 0.530012 1.4:-8667055 None:intergenic
CAGAGCCATCTACTTCGGAT+TGG 0.530846 1.4:+8671099 MS.gene51554:CDS
CATCTATTGGAGAGTTGGTA+TGG 0.533401 1.4:-8670874 None:intergenic
AGAAGGATTGGTGATGGCGG+TGG 0.534777 1.4:-8665480 None:intergenic
GCTGGAATCTTCTGTGGCGA+CGG 0.536040 1.4:+8669109 MS.gene51554:CDS
TTGAATTCCTCAGCATCTGT+GGG 0.538648 1.4:-8668801 None:intergenic
TACTCAGAGCATTGCAACAA+TGG 0.538876 1.4:-8670575 None:intergenic
CAGGCTAGCCTAAAGTATCA+TGG 0.540060 1.4:+8668342 MS.gene51554:intron
TTTGCTTTCACAGACTTGAT+GGG 0.542250 1.4:-8671045 None:intergenic
CCACCGTGAAACACAATACT+CGG 0.542340 1.4:+8666582 MS.gene51554:CDS
TTACCTCAGAACCATCTTGT+GGG 0.543543 1.4:-8667500 None:intergenic
GTTATAAACACCTCTGGCAG+TGG 0.544020 1.4:-8666797 None:intergenic
ACATGCTTCTAGCAATGAAA+GGG 0.544689 1.4:+8670442 MS.gene51554:CDS
TCAACCATCCTAGCACCTCC+AGG 0.545986 1.4:+8668820 MS.gene51554:CDS
GTCGCATGAGAAGCCTTGAC+AGG 0.546192 1.4:-8666496 None:intergenic
AATTCCTTAACAGCCTGGAT+AGG 0.546382 1.4:-8667426 None:intergenic
GTTGCACGTCTTAGGTCCAT+TGG 0.547167 1.4:-8668959 None:intergenic
GTGACAGTTTCCAAGCCACC+AGG 0.548258 1.4:+8668474 MS.gene51554:CDS
CTCCACAGAGCCATCTACTT+CGG 0.551057 1.4:+8671094 MS.gene51554:CDS
AATGTCTTTGGCAAGAGAGA+AGG 0.551265 1.4:+8669591 MS.gene51554:CDS
AAGGCTTCTCATGCGACACA+TGG 0.551643 1.4:+8666502 MS.gene51554:CDS
ATTCTCTGAATTTACTTGTG+AGG 0.552178 1.4:-8667475 None:intergenic
ATCCATATTGGACGGAGTTG+AGG 0.552766 1.4:-8668634 None:intergenic
TTAAAATTTGATAGGAGTGA+CGG 0.554336 1.4:+8667004 MS.gene51554:CDS
CAGGTGCATTTGCCGGATAT+AGG 0.554569 1.4:-8668761 None:intergenic
CAGGTGGCTTGAAAAGTGGC+AGG 0.557391 1.4:+8671133 MS.gene51554:CDS
ATTTGTCAAAAGGCTAACGT+TGG 0.564831 1.4:+8669534 MS.gene51554:intron
CCAGTAGTTGAAGCACAACT+AGG 0.567291 1.4:-8668537 None:intergenic
CGGTATTCGCCAGTTATCTG+GGG 0.571016 1.4:+8670897 MS.gene51554:CDS
TTTGGTGCTGGAATCTTCTG+TGG 0.572134 1.4:+8669103 MS.gene51554:CDS
GGCGACGGTTGTGCTTGCGA+AGG 0.572382 1.4:+8669124 MS.gene51554:CDS
AACGTAGGAGACAACAGTCT+TGG 0.572639 1.4:+8666734 MS.gene51554:CDS
ATCTTGGGAGCAAATGCTTG+TGG 0.574082 1.4:-8669214 None:intergenic
AAAATCCTGCAACAATTGAA+GGG 0.574303 1.4:+8667107 MS.gene51554:CDS
TGGATACATTTGATCGTCCA+CGG 0.575264 1.4:-8666909 None:intergenic
GAATCAGCGCAAGGGGTCAA+CGG 0.575782 1.4:-8671189 None:intergenic
AACATGCTTCTAGCAATGAA+AGG 0.575833 1.4:+8670441 MS.gene51554:CDS
GATGTATACTTGAACTTGGG+GGG 0.580200 1.4:-8665510 None:intergenic
TTACCTGGGGAAGTGAATCA+TGG 0.582239 1.4:-8667216 None:intergenic
CCGAGTATTGTGTTTCACGG+TGG 0.583708 1.4:-8666582 None:intergenic
GATTCTAAAGTCCTTTGCAA+TGG 0.584197 1.4:+8671207 MS.gene51554:CDS
AGAGCAACATTGTTGAAGAA+GGG 0.586625 1.4:+8670465 MS.gene51554:CDS
GACTTTAGAATCAGCGCAAG+GGG 0.586639 1.4:-8671196 None:intergenic
AGATTATCAGATGGTATACA+GGG 0.586972 1.4:+8668564 MS.gene51554:CDS
TCAGAGAATATCCCACAAGA+TGG 0.588289 1.4:+8667489 MS.gene51554:CDS
TAGACGCTGCCTACAATTTG+GGG 0.588410 1.4:+8668371 MS.gene51554:CDS
GATTGATCATCCATATTGGA+CGG 0.592859 1.4:-8668642 None:intergenic
ATAGGATCAGGCATCAATTG+AGG 0.595329 1.4:-8667408 None:intergenic
TGACAACACCGGCATCAGCT+AGG 0.595994 1.4:+8669367 MS.gene51554:CDS
TTCTGTCAAGATAGGAGACT+CGG 0.595997 1.4:-8668730 None:intergenic
ATTTGAAAATTGCAGTGAGA+TGG 0.600065 1.4:+8667446 MS.gene51554:CDS
TTCATCAGAAGGATTGGTGA+TGG 0.602391 1.4:-8665486 None:intergenic
ATTACCTCAGAACCATCTTG+TGG 0.602494 1.4:-8667501 None:intergenic
GGACTTTAGAATCAGCGCAA+GGG 0.602915 1.4:-8671197 None:intergenic
ATTGAGAGTTGAGGAGAGAG+AGG 0.603653 1.4:-8665453 None:intergenic
GCAACTGTTATAAACACCTC+TGG 0.607058 1.4:-8666803 None:intergenic
GGATACATTTGATCGTCCAC+GGG 0.608080 1.4:-8666908 None:intergenic
TTCTCAGCAGCCACTGCCAG+AGG 0.609773 1.4:+8666787 MS.gene51554:CDS
AACTTAGATGATGAATCAGA+TGG 0.610248 1.4:+8670964 MS.gene51554:CDS
GGTTGTGCTTGCGAAGGCTG+TGG 0.610748 1.4:+8669130 MS.gene51554:CDS
CGAAGTAGATGGCTCTGTGG+AGG 0.611110 1.4:-8671093 None:intergenic
GTCATCATCACTAACTGAGT+CGG 0.611386 1.4:+8666970 MS.gene51554:CDS
ATGATGTATACTTGAACTTG+GGG 0.612101 1.4:-8665512 None:intergenic
TCTGTAGATGAAGAACGTGT+AGG 0.614632 1.4:-8670829 None:intergenic
AGTCCTTTGCAATGGCAATG+AGG 0.616936 1.4:+8671215 MS.gene51554:CDS
GCATCAGCTAGGCACAAAAG+AGG 0.618145 1.4:+8669378 MS.gene51554:CDS
GTCTCCAATAAAGCCTGTCA+AGG 0.618547 1.4:+8666483 MS.gene51554:CDS
TATCCCACAAGATGGTTCTG+AGG 0.620911 1.4:+8667497 MS.gene51554:CDS
CTATTGGAGAGTTGGTATGG+TGG 0.623132 1.4:-8670871 None:intergenic
ATTGGATCAAGCTCCTCAGG+TGG 0.623354 1.4:+8671117 MS.gene51554:CDS
AATCCTCATTGCCATTGCAA+AGG 0.624686 1.4:-8671218 None:intergenic
CGCGGAGACTTGAATACGAG+AGG 0.625882 1.4:-8666547 None:intergenic
AGGACTTTAGAATCAGCGCA+AGG 0.627509 1.4:-8671198 None:intergenic
TCAGCGCAAGGGGTCAACGG+CGG 0.628739 1.4:-8671186 None:intergenic
TCTTATACCATATTATTCAG+TGG 0.629452 1.4:-8669259 None:intergenic
CAAATGCACCTGATAAGAGG+AGG 0.630195 1.4:+8668772 MS.gene51554:CDS
CTTATTACTTCCAAGAACAA+CGG 0.633004 1.4:-8668403 None:intergenic
ACAAGTACTGATGATGCCAA+TGG 0.639150 1.4:+8668943 MS.gene51554:CDS
CTTCATCTACAGAAAATGAG+TGG 0.639866 1.4:+8670839 MS.gene51554:CDS
GTGAAACACAATACTCGGAA+AGG 0.645194 1.4:+8666587 MS.gene51554:CDS
AAATCCTGCAACAATTGAAG+GGG 0.646037 1.4:+8667108 MS.gene51554:CDS
AGGCTTCTCATGCGACACAT+GGG 0.646230 1.4:+8666503 MS.gene51554:CDS
GAGTATTGTGTTTCACGGTG+GGG 0.646389 1.4:-8666580 None:intergenic
ATCAGAAGGATTGGTGATGG+CGG 0.649908 1.4:-8665483 None:intergenic
GGTACGCCCCACAGATGCTG+AGG 0.649944 1.4:+8668794 MS.gene51554:CDS
GGTGGCGGCATTGAGAGTTG+AGG 0.650716 1.4:-8665462 None:intergenic
TCGACTGGATGTCGATGTGA+TGG 0.651749 1.4:+8669561 MS.gene51554:CDS
GAAACATCTCAAAGTAACGT+AGG 0.652192 1.4:+8666719 MS.gene51554:CDS
AGTGGAACATCAGCTGCACA+TGG 0.663360 1.4:-8669241 None:intergenic
TGATGTATACTTGAACTTGG+GGG 0.665983 1.4:-8665511 None:intergenic
AATGGAACAATCTACTGATG+CGG 0.671669 1.4:+8666943 MS.gene51554:CDS
TACCAACTCTCCAATAGATG+CGG 0.673526 1.4:+8670877 MS.gene51554:CDS
CGGTGGGGAGCACTGATACG+CGG 0.675366 1.4:-8666565 None:intergenic
AAATGCACCTGATAAGAGGA+GGG 0.675925 1.4:+8668773 MS.gene51554:CDS
ATTTGCCGGATATAGGTCGA+TGG 0.681858 1.4:-8668754 None:intergenic
GGTATTCGCCAGTTATCTGG+GGG 0.691155 1.4:+8670898 MS.gene51554:CDS
AAATGCAACCCAATGCCTGG+TGG 0.691964 1.4:-8668489 None:intergenic
ACTGGTGTGAGATTATCAGA+TGG 0.692029 1.4:+8668555 MS.gene51554:CDS
GGAGACTTGAATACGAGAGG+TGG 0.694779 1.4:-8666544 None:intergenic
AGATGTGAATATGACAACAC+CGG 0.696103 1.4:+8669356 MS.gene51554:CDS
TTTGCATATAGTGGAAAACG+TGG 0.696559 1.4:+8668605 MS.gene51554:CDS
TGAATTCCTCAGCATCTGTG+GGG 0.698955 1.4:-8668800 None:intergenic
GTAGTTGAAGCACAACTAGG+TGG 0.703404 1.4:-8668534 None:intergenic
ATCCGAAGTAGATGGCTCTG+TGG 0.709057 1.4:-8671096 None:intergenic
ACAATGGTGTTACAGGTGAG+AGG 0.709448 1.4:-8670559 None:intergenic
GAATGTGCCAGACTGCTGCG+TGG 0.712112 1.4:-8670778 None:intergenic
TATTCATCGACAGATGCTGG+AGG 0.729564 1.4:-8666875 None:intergenic
GATTATCAGATGGTATACAG+GGG 0.764872 1.4:+8668565 MS.gene51554:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTATATTAAAATTTGAT+AGG + chr1.4:8666996-8667015 MS.gene51554:CDS 10.0%
!!! AAATACAATAACATAATTTT+TGG + chr1.4:8670081-8670100 MS.gene51554:intron 10.0%
!!! CTTTTATTTTTTTTAATCAT+TGG + chr1.4:8667706-8667725 MS.gene51554:intron 10.0%
!!! TATTTTAAATATTTGTCAAA+AGG + chr1.4:8669524-8669543 MS.gene51554:intron 10.0%
!! AAATTATGTTATTGTATTTC+AGG - chr1.4:8670080-8670099 None:intergenic 15.0%
!! AATTATGTTATTGTATTTCA+GGG - chr1.4:8670079-8670098 None:intergenic 15.0%
!! ACACAATAAATGAAATAAAA+TGG - chr1.4:8665719-8665738 None:intergenic 15.0%
!! ATATTTATAATGCTGATATA+GGG + chr1.4:8667263-8667282 MS.gene51554:intron 15.0%
!! TATATTTATAATGCTGATAT+AGG + chr1.4:8667262-8667281 MS.gene51554:intron 15.0%
!! TTCACAAGAAAATAAAAAAA+AGG + chr1.4:8665865-8665884 MS.gene51554:intron 15.0%
!!! AAATATCACCTAATTTTTTA+AGG - chr1.4:8669317-8669336 None:intergenic 15.0%
!!! AGAAATTTTAGAAACTAAAT+TGG - chr1.4:8670043-8670062 None:intergenic 15.0%
!!! AGCAATTTTTCTTAAATTTT+AGG + chr1.4:8670235-8670254 MS.gene51554:intron 15.0%
!!! CAATTTTTCTTAAATTTTAG+GGG + chr1.4:8670237-8670256 MS.gene51554:intron 15.0%
!!! GAAATTTTAGAAACTAAATT+GGG - chr1.4:8670042-8670061 None:intergenic 15.0%
!!! GCAATTTTTCTTAAATTTTA+GGG + chr1.4:8670236-8670255 MS.gene51554:intron 15.0%
!!! TAATTGATTTTTTTTCTTTC+AGG + chr1.4:8667520-8667539 MS.gene51554:intron 15.0%
!!! TTTGTTTTTAAAGAAGTATT+AGG + chr1.4:8669948-8669967 MS.gene51554:intron 15.0%
!! AAAAGTCAGCAATAATTTAT+TGG + chr1.4:8668156-8668175 MS.gene51554:intron 20.0%
!! AAATAAATTCCTATAACATG+TGG - chr1.4:8670165-8670184 None:intergenic 20.0%
!! CACATTAAAATGAATACATA+TGG + chr1.4:8670138-8670157 MS.gene51554:intron 20.0%
!! CATTAAAATGCTTATCAATT+AGG + chr1.4:8666233-8666252 MS.gene51554:intron 20.0%
!! TATAGGAATTTATTTCAGTA+TGG + chr1.4:8670170-8670189 MS.gene51554:intron 20.0%
!! TCTTTACGATTATTATGTTA+TGG + chr1.4:8665616-8665635 MS.gene51554:intron 20.0%
!! TGGAATTATATTTGTTTGAT+TGG + chr1.4:8666140-8666159 MS.gene51554:intron 20.0%
!!! ATAATTTTTGGTACTTCTTT+TGG + chr1.4:8670093-8670112 MS.gene51554:intron 20.0%
!!! ATTTAGAGCATATAGAAATA+TGG - chr1.4:8669470-8669489 None:intergenic 20.0%
!!! ATTTTAATGCAAAAATGAGA+CGG - chr1.4:8666222-8666241 None:intergenic 20.0%
!!! CATATGTATTCATTTTAATG+TGG - chr1.4:8670140-8670159 None:intergenic 20.0%
!!! TTTTTTAAATGCAGATTTTG+TGG + chr1.4:8670412-8670431 MS.gene51554:intron 20.0%
! AAAAAACTTAAAAGATGTGC+TGG - chr1.4:8669769-8669788 None:intergenic 25.0%
! AAAAACTTAAAAGATGTGCT+GGG - chr1.4:8669768-8669787 None:intergenic 25.0%
! AAAAGATTGATCATCCATAT+TGG - chr1.4:8668649-8668668 None:intergenic 25.0%
! AAACTTGATAAGCAGAAAAA+TGG - chr1.4:8667955-8667974 None:intergenic 25.0%
! AAAGTTCATATATTCATCAG+AGG - chr1.4:8667557-8667576 None:intergenic 25.0%
! AAATGATGTATACTTGAACT+TGG - chr1.4:8665517-8665536 None:intergenic 25.0%
! AACTTGATAAGCAGAAAAAT+GGG - chr1.4:8667954-8667973 None:intergenic 25.0%
! AATATTGCATTGCTCTATAT+AGG + chr1.4:8668914-8668933 MS.gene51554:intron 25.0%
! AATGATGTATACTTGAACTT+GGG - chr1.4:8665516-8665535 None:intergenic 25.0%
! AATGGAATGAAACAAAAAGT+AGG - chr1.4:8665775-8665794 None:intergenic 25.0%
! ACATCTCTAAACAAAAAAGA+CGG - chr1.4:8666308-8666327 None:intergenic 25.0%
! ATAAACAAAATCATTCAGAG+AGG - chr1.4:8667614-8667633 None:intergenic 25.0%
! ATATAGAGCAATGCAATATT+TGG - chr1.4:8668914-8668933 None:intergenic 25.0%
! ATGCAAACTTATAGAAGATT+TGG - chr1.4:8668592-8668611 None:intergenic 25.0%
! ATTGCATATCATAGAAAGTA+TGG - chr1.4:8669039-8669058 None:intergenic 25.0%
! GGGTAGCATAATTAATTAAT+TGG - chr1.4:8665550-8665569 None:intergenic 25.0%
! TACAATGCAATGTCAAATAA+CGG - chr1.4:8665977-8665996 None:intergenic 25.0%
! TCTTATACCATATTATTCAG+TGG - chr1.4:8669262-8669281 None:intergenic 25.0%
! TGACAAAATTTGTATGTATC+AGG + chr1.4:8666669-8666688 MS.gene51554:intron 25.0%
! TTAAAATTTGATAGGAGTGA+CGG + chr1.4:8667004-8667023 MS.gene51554:CDS 25.0%
! TTCTATAAGTTTGCATATAG+TGG + chr1.4:8668596-8668615 MS.gene51554:CDS 25.0%
! TTTATTGTGTTAGACATGTT+TGG + chr1.4:8665729-8665748 MS.gene51554:intron 25.0%
!! AAAATACTGTGAATGTTTTC+AGG + chr1.4:8669431-8669450 MS.gene51554:CDS 25.0%
!! ATGTTTCTGTATCTGATAAA+TGG - chr1.4:8666706-8666725 None:intergenic 25.0%
!! TGTTTCTGTATCTGATAAAT+GGG - chr1.4:8666705-8666724 None:intergenic 25.0%
!!! TCATTGATCTAGTTTGTTTA+TGG + chr1.4:8667815-8667834 MS.gene51554:intron 25.0%
!!! TTATCAAGTTTTGCTTTGTT+TGG + chr1.4:8667964-8667983 MS.gene51554:intron 25.0%
AAAATCCTGCAACAATTGAA+GGG + chr1.4:8667107-8667126 MS.gene51554:CDS 30.0%
AACAGTCAATTATCAAAGTG+CGG - chr1.4:8666106-8666125 None:intergenic 30.0%
AACTTAGATGATGAATCAGA+TGG + chr1.4:8670964-8670983 MS.gene51554:CDS 30.0%
ACTTGATAAGCAGAAAAATG+GGG - chr1.4:8667953-8667972 None:intergenic 30.0%
AGAATATTGTTCCAGAGATA+TGG - chr1.4:8666007-8666026 None:intergenic 30.0%
AGATTATCAGATGGTATACA+GGG + chr1.4:8668564-8668583 MS.gene51554:CDS 30.0%
ATAATTGTTACAGTCAATGC+AGG + chr1.4:8668323-8668342 MS.gene51554:intron 30.0%
ATATTAGATTCCTCCAACAA+AGG - chr1.4:8667058-8667077 None:intergenic 30.0%
ATGATGTATACTTGAACTTG+GGG - chr1.4:8665515-8665534 None:intergenic 30.0%
ATTCTCTGAATTTACTTGTG+AGG - chr1.4:8667478-8667497 None:intergenic 30.0%
ATTTGAAAATTGCAGTGAGA+TGG + chr1.4:8667446-8667465 MS.gene51554:CDS 30.0%
ATTTGGTAAAACTAGCAAAC+AGG - chr1.4:8668897-8668916 None:intergenic 30.0%
CCTTATAAGGAAAATTGTTG+AGG + chr1.4:8669738-8669757 MS.gene51554:intron 30.0%
CTAATATGGTTCATCAAGAA+AGG + chr1.4:8667071-8667090 MS.gene51554:CDS 30.0%
CTTATTACTTCCAAGAACAA+CGG - chr1.4:8668406-8668425 None:intergenic 30.0%
GTTATCATGATCTTTCTCAT+AGG + chr1.4:8668852-8668871 MS.gene51554:intron 30.0%
GTTCAAATTCCACTATGTTA+CGG + chr1.4:8665949-8665968 MS.gene51554:intron 30.0%
GTTTATAACAGTTGCTCAAA+AGG + chr1.4:8666811-8666830 MS.gene51554:CDS 30.0%
TCCAAATACTAGTCCTTATA+AGG + chr1.4:8669725-8669744 MS.gene51554:intron 30.0%
TCTGGTCAGTATAAATGTTA+TGG + chr1.4:8669677-8669696 MS.gene51554:intron 30.0%
TGATGTTCCACTGAATAATA+TGG + chr1.4:8669252-8669271 MS.gene51554:CDS 30.0%
TGGGTTAATTAACATAAGAG+AGG - chr1.4:8666197-8666216 None:intergenic 30.0%
TGTCTCGTTATCAATTAGAT+CGG + chr1.4:8665808-8665827 MS.gene51554:intron 30.0%
TTTAACGAAATTAGCAGAAG+TGG + chr1.4:8667866-8667885 MS.gene51554:intron 30.0%
TTTGTTGGAGGAATCTAATA+TGG + chr1.4:8667057-8667076 MS.gene51554:CDS 30.0%
! AATAAAAGTGTATTCAAGCC+TGG - chr1.4:8667694-8667713 None:intergenic 30.0%
! AGACAATGTTGTTTGATGAA+TGG - chr1.4:8665793-8665812 None:intergenic 30.0%
! CCTCAACAATTTTCCTTATA+AGG - chr1.4:8669741-8669760 None:intergenic 30.0%
! CTAAATACTAGTCTCTTTAG+AGG + chr1.4:8667659-8667678 MS.gene51554:intron 30.0%
! GCAATAATTTATTGGCTACA+AGG + chr1.4:8668164-8668183 MS.gene51554:intron 30.0%
! GTGTTGACAAATCTCAAAAA+GGG - chr1.4:8666460-8666479 None:intergenic 30.0%
! TCCTTATAAGGACTAGTATT+TGG - chr1.4:8669729-8669748 None:intergenic 30.0%
! TGCATATTTCTGCATAAGAT+AGG + chr1.4:8667894-8667913 MS.gene51554:intron 30.0%
!! AAATTCACTAGACTTGCTTT+TGG + chr1.4:8666166-8666185 MS.gene51554:intron 30.0%
!! ACATGTATTTTGTTTGCACT+TGG + chr1.4:8667762-8667781 MS.gene51554:intron 30.0%
!! AGTGTTGACAAATCTCAAAA+AGG - chr1.4:8666461-8666480 None:intergenic 30.0%
!! CATGATAACTAACTTTTTCC+TGG - chr1.4:8668841-8668860 None:intergenic 30.0%
!! CATTTCTAGTATCACGAAAA+AGG + chr1.4:8666392-8666411 MS.gene51554:intron 30.0%
!! TAAATTTTAGGGGTTCAAAC+TGG + chr1.4:8670247-8670266 MS.gene51554:intron 30.0%
!!! AGAGTTGCATTTTGATTATC+AGG + chr1.4:8668250-8668269 MS.gene51554:intron 30.0%
AAAGAGGTTGCAATTGCAAA+AGG + chr1.4:8669394-8669413 MS.gene51554:CDS 35.0%
AAATATTCATCGACAGATGC+TGG - chr1.4:8666881-8666900 None:intergenic 35.0%
AAATCCTGCAACAATTGAAG+GGG + chr1.4:8667108-8667127 MS.gene51554:CDS 35.0%
AACAAAATCATTCAGAGAGG+AGG - chr1.4:8667611-8667630 None:intergenic 35.0%
AACATGCTTCTAGCAATGAA+AGG + chr1.4:8670441-8670460 MS.gene51554:CDS 35.0%
AACTTCAAGCAACGCAAAAA+TGG + chr1.4:8668446-8668465 MS.gene51554:CDS 35.0%
AATGGAACAATCTACTGATG+CGG + chr1.4:8666943-8666962 MS.gene51554:CDS 35.0%
ACAAAATCATTCAGAGAGGA+GGG - chr1.4:8667610-8667629 None:intergenic 35.0%
ACAATTGAAGGGGAGAAAAA+TGG + chr1.4:8667118-8667137 MS.gene51554:CDS 35.0%
ACATATGGTCCACATGTTAT+AGG + chr1.4:8670153-8670172 MS.gene51554:intron 35.0%
ACATGCTTCTAGCAATGAAA+GGG + chr1.4:8670442-8670461 MS.gene51554:CDS 35.0%
ACTCTGTCTGTCTTTATGTT+TGG + chr1.4:8665671-8665690 MS.gene51554:intron 35.0%
AGAGCAACATTGTTGAAGAA+GGG + chr1.4:8670465-8670484 MS.gene51554:CDS 35.0%
AGATGTGAATATGACAACAC+CGG + chr1.4:8669356-8669375 MS.gene51554:CDS 35.0%
AGCATCTGTCGATGAATATT+TGG + chr1.4:8666880-8666899 MS.gene51554:CDS 35.0%
AGTTCTTCTGCTATGTTACT+AGG - chr1.4:8667031-8667050 None:intergenic 35.0%
ATATTCACATCTTCCTGCAA+AGG - chr1.4:8669348-8669367 None:intergenic 35.0%
ATTTGCTTTCACAGACTTGA+TGG - chr1.4:8671049-8671068 None:intergenic 35.0%
ATTTGTCAAAAGGCTAACGT+TGG + chr1.4:8669534-8669553 MS.gene51554:intron 35.0%
CAGTAGATTGTTCCATTTCT+GGG - chr1.4:8666940-8666959 None:intergenic 35.0%
CTGTGTTCATGTACTTAAAG+AGG + chr1.4:8666055-8666074 MS.gene51554:intron 35.0%
CTTCATCTACAGAAAATGAG+TGG + chr1.4:8670839-8670858 MS.gene51554:CDS 35.0%
CTTGATAAGCAGAAAAATGG+GGG - chr1.4:8667952-8667971 None:intergenic 35.0%
GAAAATCCTGCAACAATTGA+AGG + chr1.4:8667106-8667125 MS.gene51554:CDS 35.0%
GAAACATCTCAAAGTAACGT+AGG + chr1.4:8666719-8666738 MS.gene51554:CDS 35.0%
GACAGAAAATTGTGACAATC+AGG + chr1.4:8670510-8670529 MS.gene51554:CDS 35.0%
GAGATTATCAGATGGTATAC+AGG + chr1.4:8668563-8668582 MS.gene51554:CDS 35.0%
GATATTACATCATGGACTCA+AGG + chr1.4:8668057-8668076 MS.gene51554:intron 35.0%
GATCAATCAAAAGAGACTAG+AGG - chr1.4:8667329-8667348 None:intergenic 35.0%
GATGGATGTATGAATGTCTT+TGG + chr1.4:8669579-8669598 MS.gene51554:CDS 35.0%
GATTATCAGATGGTATACAG+GGG + chr1.4:8668565-8668584 MS.gene51554:CDS 35.0%
GATTGATCATCCATATTGGA+CGG - chr1.4:8668645-8668664 None:intergenic 35.0%
GTACTGTGCTCTTCTTTAAT+TGG - chr1.4:8667744-8667763 None:intergenic 35.0%
GTGTAATGGCATTATCTACT+TGG + chr1.4:8668216-8668235 MS.gene51554:intron 35.0%
GTTTGGAGGTTTCAAAATTG+AGG + chr1.4:8667981-8668000 MS.gene51554:intron 35.0%
TATAGTTGACATCCACATGA+GGG + chr1.4:8670343-8670362 MS.gene51554:intron 35.0%
TCAGTAGATTGTTCCATTTC+TGG - chr1.4:8666941-8666960 None:intergenic 35.0%
TCTTGTGAAAACTCAGTATC+CGG - chr1.4:8665854-8665873 None:intergenic 35.0%
TGAAACACCTGATGTATTGA+AGG + chr1.4:8671011-8671030 MS.gene51554:CDS 35.0%
TGAGAGACTAAACTGAAAGT+TGG + chr1.4:8670281-8670300 MS.gene51554:intron 35.0%
TGAGTCCATGATGTAATATC+AGG - chr1.4:8668057-8668076 None:intergenic 35.0%
TGATGTATACTTGAACTTGG+GGG - chr1.4:8665514-8665533 None:intergenic 35.0%
TGATTCTTAGATCCTTAGAC+CGG + chr1.4:8665832-8665851 MS.gene51554:intron 35.0%
TGGTAACAGAGTAGAATTTC+AGG + chr1.4:8669150-8669169 MS.gene51554:CDS 35.0%
TGTACTGAATACCATATCTC+TGG + chr1.4:8665993-8666012 MS.gene51554:intron 35.0%
TTCTTAATCTGAGAAGCTTC+TGG - chr1.4:8665419-8665438 None:intergenic 35.0%
TTGATAAGCAGAAAAATGGG+GGG - chr1.4:8667951-8667970 None:intergenic 35.0%
TTTCAAATTCCTTAACAGCC+TGG - chr1.4:8667434-8667453 None:intergenic 35.0%
TTTGCTTTCACAGACTTGAT+GGG - chr1.4:8671048-8671067 None:intergenic 35.0%
TTTGTATGTATCAGGCTTGA+AGG + chr1.4:8666677-8666696 MS.gene51554:intron 35.0%
! AAATGCAGATTTTGTGGCAA+TGG + chr1.4:8670418-8670437 MS.gene51554:intron 35.0%
! AGAAGAACTTTTGCCTTTGT+TGG + chr1.4:8667042-8667061 MS.gene51554:CDS 35.0%
! TCTCAAGAGCACATAAACTT+AGG + chr1.4:8667154-8667173 MS.gene51554:CDS 35.0%
! TGCAGTTACTGTGATTGTTT+TGG + chr1.4:8669085-8669104 MS.gene51554:intron 35.0%
! TTTCCGAGTATTGTGTTTCA+CGG - chr1.4:8666588-8666607 None:intergenic 35.0%
! TTTGCATATAGTGGAAAACG+TGG + chr1.4:8668605-8668624 MS.gene51554:CDS 35.0%
!! ACACAGTTTAACTTGTTGTC+TGG + chr1.4:8669659-8669678 MS.gene51554:intron 35.0%
!! CCTGCTAGCCTTAAAAAATT+AGG + chr1.4:8669306-8669325 MS.gene51554:intron 35.0%
!! CTACAAGGTTTTAGTCATGT+AGG + chr1.4:8668179-8668198 MS.gene51554:intron 35.0%
!! GATAACTAACTTTTTCCTGG+AGG - chr1.4:8668838-8668857 None:intergenic 35.0%
!! GATTCTAAAGTCCTTTGCAA+TGG + chr1.4:8671207-8671226 MS.gene51554:CDS 35.0%
!! TAAGGGCATCTCTTAGAATA+AGG + chr1.4:8668081-8668100 MS.gene51554:intron 35.0%
!!! CCTAATTTTTTAAGGCTAGC+AGG - chr1.4:8669309-8669328 None:intergenic 35.0%
!!! GCGTGGTTTTTTAGAAGATT+TGG - chr1.4:8670764-8670783 None:intergenic 35.0%
!!! TCAAGTTTTGCTTTGTTTGG+AGG + chr1.4:8667967-8667986 MS.gene51554:intron 35.0%
AAAACTCAGTATCCGGTCTA+AGG - chr1.4:8665847-8665866 None:intergenic 40.0%
AAATGCACCTGATAAGAGGA+GGG + chr1.4:8668773-8668792 MS.gene51554:CDS 40.0%
AACAATCTACTGATGCGGTT+GGG + chr1.4:8666948-8666967 MS.gene51554:CDS 40.0%
AACACAGCACTGTCAAATAG+TGG - chr1.4:8666042-8666061 None:intergenic 40.0%
AATCCTCATTGCCATTGCAA+AGG - chr1.4:8671221-8671240 None:intergenic 40.0%
AATGCAAAAATGAGACGGTG+TGG - chr1.4:8666217-8666236 None:intergenic 40.0%
AATGTCTTTGGCAAGAGAGA+AGG + chr1.4:8669591-8669610 MS.gene51554:CDS 40.0%
AATTCCTTAACAGCCTGGAT+AGG - chr1.4:8667429-8667448 None:intergenic 40.0%
AATTTCAAGCTTCAGTGTGC+AGG + chr1.4:8667354-8667373 MS.gene51554:intron 40.0%
ACATCATGGACTCAAGGTTA+AGG + chr1.4:8668063-8668082 MS.gene51554:intron 40.0%
ACTGGTGTGAGATTATCAGA+TGG + chr1.4:8668555-8668574 MS.gene51554:CDS 40.0%
AGAATCCATCGACCTATATC+CGG + chr1.4:8668749-8668768 MS.gene51554:CDS 40.0%
ATAAACTTAGGCTCGAGTTC+AGG + chr1.4:8667166-8667185 MS.gene51554:CDS 40.0%
ATAGGATCAGGCATCAATTG+AGG - chr1.4:8667411-8667430 None:intergenic 40.0%
ATCATCTAAGTTAGCGCTTG+GGG - chr1.4:8670956-8670975 None:intergenic 40.0%
ATGAGACTACAGTGGTGTAA+TGG + chr1.4:8668202-8668221 MS.gene51554:intron 40.0%
ATGCAAAAATGAGACGGTGT+GGG - chr1.4:8666216-8666235 None:intergenic 40.0%
ATTACCTCAGAACCATCTTG+TGG - chr1.4:8667504-8667523 None:intergenic 40.0%
ATTAGGCGTATGTGCATTGT+CGG + chr1.4:8666250-8666269 MS.gene51554:intron 40.0%
CAACATTGTTGAAGAAGGGT+TGG + chr1.4:8670469-8670488 MS.gene51554:CDS 40.0%
CATCATCTAAGTTAGCGCTT+GGG - chr1.4:8670957-8670976 None:intergenic 40.0%
CATCATGGACTCAAGGTTAA+GGG + chr1.4:8668064-8668083 MS.gene51554:intron 40.0%
CGAGTCCTGATATTACATCA+TGG + chr1.4:8668049-8668068 MS.gene51554:intron 40.0%
CTTGTCGTCTTCTTCATTTC+AGG + chr1.4:8666429-8666448 MS.gene51554:intron 40.0%
GAAGCTTCCTTCAATACATC+AGG - chr1.4:8671021-8671040 None:intergenic 40.0%
GAGAGCAACATTGTTGAAGA+AGG + chr1.4:8670464-8670483 MS.gene51554:CDS 40.0%
GATGTATACTTGAACTTGGG+GGG - chr1.4:8665513-8665532 None:intergenic 40.0%
GCAACTGTTATAAACACCTC+TGG - chr1.4:8666806-8666825 None:intergenic 40.0%
GTATAGTTGACATCCACATG+AGG + chr1.4:8670342-8670361 MS.gene51554:intron 40.0%
GTCATCATCACTAACTGAGT+CGG + chr1.4:8666970-8666989 MS.gene51554:CDS 40.0%
GTGAAACACAATACTCGGAA+AGG + chr1.4:8666587-8666606 MS.gene51554:CDS 40.0%
TACCAACTCTCCAATAGATG+CGG + chr1.4:8670877-8670896 MS.gene51554:CDS 40.0%
TACGGATGCCATGATACTTT+AGG - chr1.4:8668353-8668372 None:intergenic 40.0%
TACTGGCAGCATAAAGCAAA+GGG - chr1.4:8669894-8669913 None:intergenic 40.0%
TCAGAGAATATCCCACAAGA+TGG + chr1.4:8667489-8667508 MS.gene51554:CDS 40.0%
TCATCATCTAAGTTAGCGCT+TGG - chr1.4:8670958-8670977 None:intergenic 40.0%
TCTGTAGATGAAGAACGTGT+AGG - chr1.4:8670832-8670851 None:intergenic 40.0%
TGGATACATTTGATCGTCCA+CGG - chr1.4:8666912-8666931 None:intergenic 40.0%
TGTCAAGAACCCCAATCAAA+GGG - chr1.4:8665573-8665592 None:intergenic 40.0%
TTAATCAATGTTGTCCGTCG+TGG + chr1.4:8665906-8665925 MS.gene51554:intron 40.0%
TTACCTCAGAACCATCTTGT+GGG - chr1.4:8667503-8667522 None:intergenic 40.0%
TTACTGGCAGCATAAAGCAA+AGG - chr1.4:8669895-8669914 None:intergenic 40.0%
TTCTGTCAAGATAGGAGACT+CGG - chr1.4:8668733-8668752 None:intergenic 40.0%
TTCTTACAGTTGCACGTCTT+AGG - chr1.4:8668970-8668989 None:intergenic 40.0%
TTGAATTCCTCAGCATCTGT+GGG - chr1.4:8668804-8668823 None:intergenic 40.0%
TTGATCCAATCCGAAGTAGA+TGG - chr1.4:8671107-8671126 None:intergenic 40.0%
TTGCAATGGCAATGAGGATT+CGG + chr1.4:8671221-8671240 MS.gene51554:CDS 40.0%
TTGGCTGGACAAATGCAAAA+AGG - chr1.4:8670698-8670717 None:intergenic 40.0%
TTTAAATGCAACCCAATGCC+TGG - chr1.4:8668495-8668514 None:intergenic 40.0%
! ACTGTTGTGAGAGACTTGTT+TGG + chr1.4:8666120-8666139 MS.gene51554:intron 40.0%
! AGAACTTTTGCCTTTGTTGG+AGG + chr1.4:8667045-8667064 MS.gene51554:CDS 40.0%
! AGCAAATGCTTGTGGATTAC+GGG - chr1.4:8669209-8669228 None:intergenic 40.0%
! CTACTGAAGCATCAGTTTCA+TGG - chr1.4:8668692-8668711 None:intergenic 40.0%
! CTTTAGAGGTTAATGACTCC+AGG + chr1.4:8667673-8667692 MS.gene51554:intron 40.0%
! GAGCAAATGCTTGTGGATTA+CGG - chr1.4:8669210-8669229 None:intergenic 40.0%
! GGAGAAAAATGGTGCTGAAT+TGG + chr1.4:8667129-8667148 MS.gene51554:CDS 40.0%
! GGAGAAACTCTCTTTTGGAT+TGG - chr1.4:8671075-8671094 None:intergenic 40.0%
! GTCCTTTCATTTGTGCTGAT+TGG + chr1.4:8670672-8670691 MS.gene51554:intron 40.0%
! TCGATGGATTCTGTCAAGAT+AGG - chr1.4:8668741-8668760 None:intergenic 40.0%
! TTCATCAGAAGGATTGGTGA+TGG - chr1.4:8665489-8665508 None:intergenic 40.0%
! TTTTTGCATTTGTCCAGCCA+AGG + chr1.4:8670697-8670716 MS.gene51554:intron 40.0%
!! ACAAGTACTGATGATGCCAA+TGG + chr1.4:8668943-8668962 MS.gene51554:CDS 40.0%
!! CATCTATTGGAGAGTTGGTA+TGG - chr1.4:8670877-8670896 None:intergenic 40.0%
!! CATTGCAACAATGGTGTTAC+AGG - chr1.4:8670569-8670588 None:intergenic 40.0%
!! CTATTTTTCGCAATCCACGA+CGG - chr1.4:8665923-8665942 None:intergenic 40.0%
!! TACTCAGAGCATTGCAACAA+TGG - chr1.4:8670578-8670597 None:intergenic 40.0%
!!! TACTGTGATTGTTTTGGTGC+TGG + chr1.4:8669091-8669110 MS.gene51554:CDS 40.0%
!!! TATTTTGATGCGACCTTTGC+AGG + chr1.4:8669332-8669351 MS.gene51554:intron 40.0%
AACGTAGGAGACAACAGTCT+TGG + chr1.4:8666734-8666753 MS.gene51554:CDS 45.0%
AAGCAGCTTCCCCAAATTGT+AGG - chr1.4:8668383-8668402 None:intergenic 45.0%
AAGTTAGCGCTTGGGGTAAT+CGG - chr1.4:8670949-8670968 None:intergenic 45.0%
ACAGCAAGAGCTTAGTTACC+TGG - chr1.4:8667234-8667253 None:intergenic 45.0%
ACCATCTCTAGCATTCTACC+TGG - chr1.4:8669848-8669867 None:intergenic 45.0%
ACTGGCAGCATAAAGCAAAG+GGG - chr1.4:8669893-8669912 None:intergenic 45.0%
ACTTAAAAGATGTGCTGGGC+TGG - chr1.4:8669764-8669783 None:intergenic 45.0%
AGCAAGAGCTTAGTTACCTG+GGG - chr1.4:8667232-8667251 None:intergenic 45.0%
AGCTGCACATGGTACAATCT+TGG - chr1.4:8669233-8669252 None:intergenic 45.0%
AGTCCTTTGCAATGGCAATG+AGG + chr1.4:8671215-8671234 MS.gene51554:CDS 45.0%
ATCCATATTGGACGGAGTTG+AGG - chr1.4:8668637-8668656 None:intergenic 45.0%
ATCCTCAACTCCGTCCAATA+TGG + chr1.4:8668632-8668651 MS.gene51554:CDS 45.0%
ATCTTGGGAGCAAATGCTTG+TGG - chr1.4:8669217-8669236 None:intergenic 45.0%
ATGGCCATTTGCATGCATCA+TGG + chr1.4:8667834-8667853 MS.gene51554:intron 45.0%
ATTGAGAGTTGAGGAGAGAG+AGG - chr1.4:8665456-8665475 None:intergenic 45.0%
ATTGATGCCTGATCCTATCC+AGG + chr1.4:8667413-8667432 MS.gene51554:CDS 45.0%
ATTTGCCGGATATAGGTCGA+TGG - chr1.4:8668757-8668776 None:intergenic 45.0%
CAAATGCACCTGATAAGAGG+AGG + chr1.4:8668772-8668791 MS.gene51554:CDS 45.0%
CAAATTGTAGGCAGCGTCTA+CGG - chr1.4:8668371-8668390 None:intergenic 45.0%
CAGCAAGAGCTTAGTTACCT+GGG - chr1.4:8667233-8667252 None:intergenic 45.0%
CATGTAGGATGAGACTACAG+TGG + chr1.4:8668194-8668213 MS.gene51554:intron 45.0%
CCACCGTGAAACACAATACT+CGG + chr1.4:8666582-8666601 MS.gene51554:CDS 45.0%
CCAGTAGTTGAAGCACAACT+AGG - chr1.4:8668540-8668559 None:intergenic 45.0%
CCTAGTTGTGCTTCAACTAC+TGG + chr1.4:8668537-8668556 MS.gene51554:CDS 45.0%
CTCTTATCAGGTGCATTTGC+CGG - chr1.4:8668771-8668790 None:intergenic 45.0%
GAACAATCTACTGATGCGGT+TGG + chr1.4:8666947-8666966 MS.gene51554:CDS 45.0%
GCTGCACATGGTACAATCTT+GGG - chr1.4:8669232-8669251 None:intergenic 45.0%
GCTGCCAGTAATAATCTCTG+CGG + chr1.4:8669904-8669923 MS.gene51554:intron 45.0%
GGATACATTTGATCGTCCAC+GGG - chr1.4:8666911-8666930 None:intergenic 45.0%
GGCCAATCAGCACAAATGAA+AGG - chr1.4:8670677-8670696 None:intergenic 45.0%
GGGTATTCGCATCATTCTTG+AGG - chr1.4:8666844-8666863 None:intergenic 45.0%
GTAGACGCTGCCTACAATTT+GGG + chr1.4:8668370-8668389 MS.gene51554:CDS 45.0%
GTAGTTGAAGCACAACTAGG+TGG - chr1.4:8668537-8668556 None:intergenic 45.0%
GTATCCAGTCAACCCAGAAA+TGG + chr1.4:8666925-8666944 MS.gene51554:CDS 45.0%
GTCAAGAACCCCAATCAAAG+GGG - chr1.4:8665572-8665591 None:intergenic 45.0%
GTCTCCAATAAAGCCTGTCA+AGG + chr1.4:8666483-8666502 MS.gene51554:CDS 45.0%
GTGTCAAGAACCCCAATCAA+AGG - chr1.4:8665574-8665593 None:intergenic 45.0%
GTTATAAACACCTCTGGCAG+TGG - chr1.4:8666800-8666819 None:intergenic 45.0%
GTTGAATTCCTCAGCATCTG+TGG - chr1.4:8668805-8668824 None:intergenic 45.0%
TAAAAAACCACGCAGCAGTC+TGG + chr1.4:8670771-8670790 MS.gene51554:CDS 45.0%
TACCGCATCTATTGGAGAGT+TGG - chr1.4:8670882-8670901 None:intergenic 45.0%
TAGACGCTGCCTACAATTTG+GGG + chr1.4:8668371-8668390 MS.gene51554:CDS 45.0%
TATGCTACCCCCCTTTGATT+GGG + chr1.4:8665560-8665579 MS.gene51554:intron 45.0%
TATTCATCGACAGATGCTGG+AGG - chr1.4:8666878-8666897 None:intergenic 45.0%
TCAAGAACCCCAATCAAAGG+GGG - chr1.4:8665571-8665590 None:intergenic 45.0%
TCCAGGTAGAATGCTAGAGA+TGG + chr1.4:8669844-8669863 MS.gene51554:intron 45.0%
TCTAGCATTCTACCTGGACT+TGG - chr1.4:8669842-8669861 None:intergenic 45.0%
TGAATATTTGGCTGATCCCG+TGG + chr1.4:8666892-8666911 MS.gene51554:CDS 45.0%
TGAATTCCTCAGCATCTGTG+GGG - chr1.4:8668803-8668822 None:intergenic 45.0%
TGATCCTATCCAGGCTGTTA+AGG + chr1.4:8667422-8667441 MS.gene51554:CDS 45.0%
TGCAATGGCAATGAGGATTC+GGG + chr1.4:8671222-8671241 MS.gene51554:CDS 45.0%
TGCACCGCAGAGATTATTAC+TGG - chr1.4:8669911-8669930 None:intergenic 45.0%
TTAACAGCCTGGATAGGATC+AGG - chr1.4:8667423-8667442 None:intergenic 45.0%
TTACCTGGGGAAGTGAATCA+TGG - chr1.4:8667219-8667238 None:intergenic 45.0%
TTATGCTACCCCCCTTTGAT+TGG + chr1.4:8665559-8665578 MS.gene51554:intron 45.0%
TTCTCCCCTTCAATTGTTGC+AGG - chr1.4:8667115-8667134 None:intergenic 45.0%
! CGAGTATTGTGTTTCACGGT+GGG - chr1.4:8666584-8666603 None:intergenic 45.0%
! GAAGCCTTGACAGGCTTTAT+TGG - chr1.4:8666490-8666509 None:intergenic 45.0%
! GAGTATTGTGTTTCACGGTG+GGG - chr1.4:8666583-8666602 None:intergenic 45.0%
! GTGGAGGAGAAACTCTCTTT+TGG - chr1.4:8671080-8671099 None:intergenic 45.0%
! TAATCTCTGCGGTGCACTTT+TGG + chr1.4:8669915-8669934 MS.gene51554:intron 45.0%
! TATCCCACAAGATGGTTCTG+AGG + chr1.4:8667497-8667516 MS.gene51554:CDS 45.0%
! TGTTCCATTTCTGGGTTGAC+TGG - chr1.4:8666932-8666951 None:intergenic 45.0%
! TTTTACGCACTTGTGCGTTG+TGG + chr1.4:8666078-8666097 MS.gene51554:intron 45.0%
!! ACAATGGTGTTACAGGTGAG+AGG - chr1.4:8670562-8670581 None:intergenic 45.0%
!! AGGACTTTAGAATCAGCGCA+AGG - chr1.4:8671201-8671220 None:intergenic 45.0%
!! ATCAGAAGGATTGGTGATGG+CGG - chr1.4:8665486-8665505 None:intergenic 45.0%
!! CAGGCTAGCCTAAAGTATCA+TGG + chr1.4:8668342-8668361 MS.gene51554:intron 45.0%
!! CTATTGGAGAGTTGGTATGG+TGG - chr1.4:8670874-8670893 None:intergenic 45.0%
!! GACTTTAGAATCAGCGCAAG+GGG - chr1.4:8671199-8671218 None:intergenic 45.0%
!! GCAAAGGGGTGTCATTTGTA+TGG - chr1.4:8669879-8669898 None:intergenic 45.0%
!! GGACTTTAGAATCAGCGCAA+GGG - chr1.4:8671200-8671219 None:intergenic 45.0%
!! TAGGGTTTGAGTTGAGGTTC+TGG - chr1.4:8669812-8669831 None:intergenic 45.0%
!! TTTGGTGCTGGAATCTTCTG+TGG + chr1.4:8669103-8669122 MS.gene51554:CDS 45.0%
!!! AACTTTTTCCTGGAGGTGCT+AGG - chr1.4:8668831-8668850 None:intergenic 45.0%
AAATGCAACCCAATGCCTGG+TGG - chr1.4:8668492-8668511 None:intergenic 50.0%
AAGGCTTCTCATGCGACACA+TGG + chr1.4:8666502-8666521 MS.gene51554:CDS 50.0%
ACATCCACATGAGGGAAGAG+TGG + chr1.4:8670351-8670370 MS.gene51554:intron 50.0%
ACTTGGGGGGATTCATCAGA+AGG - chr1.4:8665500-8665519 None:intergenic 50.0%
AGCATTCTACCTGGACTTGG+TGG - chr1.4:8669839-8669858 None:intergenic 50.0%
AGGCTTCTCATGCGACACAT+GGG + chr1.4:8666503-8666522 MS.gene51554:CDS 50.0%
AGTGGAACATCAGCTGCACA+TGG - chr1.4:8669244-8669263 None:intergenic 50.0%
ATAACGGCGCCGTAACATAG+TGG - chr1.4:8665961-8665980 None:intergenic 50.0%
ATGCTACCCCCCTTTGATTG+GGG + chr1.4:8665561-8665580 MS.gene51554:intron 50.0%
ATTGGATCAAGCTCCTCAGG+TGG + chr1.4:8671117-8671136 MS.gene51554:CDS 50.0%
CAAGAACCCCAATCAAAGGG+GGG - chr1.4:8665570-8665589 None:intergenic 50.0%
CAGAGCCATCTACTTCGGAT+TGG + chr1.4:8671099-8671118 MS.gene51554:CDS 50.0%
CAGGTGCATTTGCCGGATAT+AGG - chr1.4:8668764-8668783 None:intergenic 50.0%
CATCCACATGAGGGAAGAGT+GGG + chr1.4:8670352-8670371 MS.gene51554:intron 50.0%
CATGCGACACATGGGTTTCT+CGG + chr1.4:8666511-8666530 MS.gene51554:CDS 50.0%
CCATTTGCATGCATCATGGC+AGG + chr1.4:8667838-8667857 MS.gene51554:intron 50.0%
CCTGCCATGATGCATGCAAA+TGG - chr1.4:8667841-8667860 None:intergenic 50.0%
CGGCAAATGCACCTGATAAG+AGG + chr1.4:8668769-8668788 MS.gene51554:CDS 50.0%
CGGTATTCGCCAGTTATCTG+GGG + chr1.4:8670897-8670916 MS.gene51554:CDS 50.0%
CGTAGACGCTGCCTACAATT+TGG + chr1.4:8668369-8668388 MS.gene51554:CDS 50.0%
CTCCACAGAGCCATCTACTT+CGG + chr1.4:8671094-8671113 MS.gene51554:CDS 50.0%
CTGGCGAATACCGCATCTAT+TGG - chr1.4:8670890-8670909 None:intergenic 50.0%
GAAGCTGCTTCCGTTGTTCT+TGG + chr1.4:8668393-8668412 MS.gene51554:CDS 50.0%
GCATCAGCTAGGCACAAAAG+AGG + chr1.4:8669378-8669397 MS.gene51554:CDS 50.0%
GCGGTATTCGCCAGTTATCT+GGG + chr1.4:8670896-8670915 MS.gene51554:CDS 50.0%
GGAGACTTGAATACGAGAGG+TGG - chr1.4:8666547-8666566 None:intergenic 50.0%
GGGGGATTCATCAGAAGGAT+TGG - chr1.4:8665495-8665514 None:intergenic 50.0%
GGTATTCGCCAGTTATCTGG+GGG + chr1.4:8670898-8670917 MS.gene51554:CDS 50.0%
GTTGCACGTCTTAGGTCCAT+TGG - chr1.4:8668962-8668981 None:intergenic 50.0%
TCCTCAGGTGGCTTGAAAAG+TGG + chr1.4:8671129-8671148 MS.gene51554:CDS 50.0%
TCGACTGGATGTCGATGTGA+TGG + chr1.4:8669561-8669580 MS.gene51554:CDS 50.0%
TGCGGTATTCGCCAGTTATC+TGG + chr1.4:8670895-8670914 MS.gene51554:CDS 50.0%
TTGCCATGATTCACTTCCCC+AGG + chr1.4:8667213-8667232 MS.gene51554:CDS 50.0%
TTTCCAAGCCACCAGGCATT+GGG + chr1.4:8668481-8668500 MS.gene51554:CDS 50.0%
! ACAGGTGAGAGGTGATTTGC+TGG - chr1.4:8670551-8670570 None:intergenic 50.0%
! ATCCGAAGTAGATGGCTCTG+TGG - chr1.4:8671099-8671118 None:intergenic 50.0%
! CCGAGTATTGTGTTTCACGG+TGG - chr1.4:8666585-8666604 None:intergenic 50.0%
! CTTTTGTGCCTAGCTGATGC+CGG - chr1.4:8669378-8669397 None:intergenic 50.0%
!! ATTCTACCTGGACTTGGTGG+TGG - chr1.4:8669836-8669855 None:intergenic 50.0%
!! GGTGCACTTTTGGAAGTGGT+GGG + chr1.4:8669925-8669944 MS.gene51554:intron 50.0%
!! TTCTACCTGGACTTGGTGGT+GGG - chr1.4:8669835-8669854 None:intergenic 50.0%
!!! TTTTCCTGGAGGTGCTAGGA+TGG - chr1.4:8668827-8668846 None:intergenic 50.0%
ACTTTGCACCCTGCTTGCCT+TGG - chr1.4:8670717-8670736 None:intergenic 55.0%
ATGCTGGAGGACTGCAGCTT+TGG - chr1.4:8666865-8666884 None:intergenic 55.0%
CAGGTGGCTTGAAAAGTGGC+AGG + chr1.4:8671133-8671152 MS.gene51554:CDS 55.0%
CGCGGAGACTTGAATACGAG+AGG - chr1.4:8666550-8666569 None:intergenic 55.0%
GAAGAGAGCCCCCAGATAAC+TGG - chr1.4:8670909-8670928 None:intergenic 55.0%
GAATCAGCGCAAGGGGTCAA+CGG - chr1.4:8671192-8671211 None:intergenic 55.0%
GCGTATGTGCATTGTCGGAC+TGG + chr1.4:8666255-8666274 MS.gene51554:intron 55.0%
GCTAACGTTGGATGCTCGAC+TGG + chr1.4:8669546-8669565 MS.gene51554:CDS 55.0%
GCTGGAATCTTCTGTGGCGA+CGG + chr1.4:8669109-8669128 MS.gene51554:CDS 55.0%
GTCGCATGAGAAGCCTTGAC+AGG - chr1.4:8666499-8666518 None:intergenic 55.0%
GTGACAGTTTCCAAGCCACC+AGG + chr1.4:8668474-8668493 MS.gene51554:CDS 55.0%
GTTTCCAAGCCACCAGGCAT+TGG + chr1.4:8668480-8668499 MS.gene51554:CDS 55.0%
TATCTGGGGGCTCTCTTCGT+TGG + chr1.4:8670911-8670930 MS.gene51554:CDS 55.0%
TCAACCATCCTAGCACCTCC+AGG + chr1.4:8668820-8668839 MS.gene51554:CDS 55.0%
TGACAACACCGGCATCAGCT+AGG + chr1.4:8669367-8669386 MS.gene51554:CDS 55.0%
TGCTGGAGGACTGCAGCTTT+GGG - chr1.4:8666864-8666883 None:intergenic 55.0%
TTGTCCAGCCAAGGCAAGCA+GGG + chr1.4:8670706-8670725 MS.gene51554:intron 55.0%
TTTGTCCAGCCAAGGCAAGC+AGG + chr1.4:8670705-8670724 MS.gene51554:intron 55.0%
! CGAAGTAGATGGCTCTGTGG+AGG - chr1.4:8671096-8671115 None:intergenic 55.0%
! CGGATTGGATCAAGCTCCTC+AGG + chr1.4:8671114-8671133 MS.gene51554:CDS 55.0%
!! AGAAGGATTGGTGATGGCGG+TGG - chr1.4:8665483-8665502 None:intergenic 55.0%
!! CGGTGCACTTTTGGAAGTGG+TGG + chr1.4:8669924-8669943 MS.gene51554:intron 55.0%
!! CTGCGGTGCACTTTTGGAAG+TGG + chr1.4:8669921-8669940 MS.gene51554:intron 55.0%
!! GGTGGGTAGGGTTTGAGTTG+AGG - chr1.4:8669818-8669837 None:intergenic 55.0%
!!! GCCACTTTTCAAGCCACCTG+AGG - chr1.4:8671133-8671152 None:intergenic 55.0%
CAACCCAATGCCTGGTGGCT+TGG - chr1.4:8668487-8668506 None:intergenic 60.0%
GAATGTGCCAGACTGCTGCG+TGG - chr1.4:8670781-8670800 None:intergenic 60.0%
GCACCCACTCTTCCCTCATG+TGG - chr1.4:8670358-8670377 None:intergenic 60.0%
GGGCGTACCCTCCTCTTATC+AGG - chr1.4:8668783-8668802 None:intergenic 60.0%
GGTTGTGCTTGCGAAGGCTG+TGG + chr1.4:8669130-8669149 MS.gene51554:CDS 60.0%
TTCTCAGCAGCCACTGCCAG+AGG + chr1.4:8666787-8666806 MS.gene51554:CDS 60.0%
! GGTGGCGGCATTGAGAGTTG+AGG - chr1.4:8665465-8665484 None:intergenic 60.0%
!! ACCTGGACTTGGTGGTGGGT+AGG - chr1.4:8669831-8669850 None:intergenic 60.0%
!! AGGATTGGTGATGGCGGTGG+CGG - chr1.4:8665480-8665499 None:intergenic 60.0%
!! CCTGGACTTGGTGGTGGGTA+GGG - chr1.4:8669830-8669849 None:intergenic 60.0%
CCCTACCCACCACCAAGTCC+AGG + chr1.4:8669827-8669846 MS.gene51554:intron 65.0%
GGCGACGGTTGTGCTTGCGA+AGG + chr1.4:8669124-8669143 MS.gene51554:CDS 65.0%
GGGGTCAACGGCGGGAATGA+AGG - chr1.4:8671180-8671199 None:intergenic 65.0%
GGTACGCCCCACAGATGCTG+AGG + chr1.4:8668794-8668813 MS.gene51554:CDS 65.0%
TCAGCGCAAGGGGTCAACGG+CGG - chr1.4:8671189-8671208 None:intergenic 65.0%
TGCACCCTGCTTGCCTTGGC+TGG - chr1.4:8670713-8670732 None:intergenic 65.0%
!! CGGTGGGGAGCACTGATACG+CGG - chr1.4:8666568-8666587 None:intergenic 65.0%
CAGCGCAAGGGGTCAACGGC+GGG - chr1.4:8671188-8671207 None:intergenic 70.0%
GGGGGCTCTCTTCGTTGGCG+CGG + chr1.4:8670916-8670935 MS.gene51554:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 8665407 8671269 8665407 ID=MS.gene51554
chr1.4 mRNA 8665407 8671269 8665407 ID=MS.gene51554.t1;Parent=MS.gene51554
chr1.4 exon 8665407 8665523 8665407 ID=MS.gene51554.t1.exon1;Parent=MS.gene51554.t1
chr1.4 CDS 8665407 8665523 8665407 ID=cds.MS.gene51554.t1;Parent=MS.gene51554.t1
chr1.4 exon 8666451 8666608 8666451 ID=MS.gene51554.t1.exon2;Parent=MS.gene51554.t1
chr1.4 CDS 8666451 8666608 8666451 ID=cds.MS.gene51554.t1;Parent=MS.gene51554.t1
chr1.4 exon 8666691 8667234 8666691 ID=MS.gene51554.t1.exon3;Parent=MS.gene51554.t1
chr1.4 CDS 8666691 8667234 8666691 ID=cds.MS.gene51554.t1;Parent=MS.gene51554.t1
chr1.4 exon 8667369 8667518 8667369 ID=MS.gene51554.t1.exon4;Parent=MS.gene51554.t1
chr1.4 CDS 8667369 8667518 8667369 ID=cds.MS.gene51554.t1;Parent=MS.gene51554.t1
chr1.4 exon 8668345 8668847 8668345 ID=MS.gene51554.t1.exon5;Parent=MS.gene51554.t1
chr1.4 CDS 8668345 8668847 8668345 ID=cds.MS.gene51554.t1;Parent=MS.gene51554.t1
chr1.4 exon 8668936 8669007 8668936 ID=MS.gene51554.t1.exon6;Parent=MS.gene51554.t1
chr1.4 CDS 8668936 8669007 8668936 ID=cds.MS.gene51554.t1;Parent=MS.gene51554.t1
chr1.4 exon 8669090 8669273 8669090 ID=MS.gene51554.t1.exon7;Parent=MS.gene51554.t1
chr1.4 CDS 8669090 8669273 8669090 ID=cds.MS.gene51554.t1;Parent=MS.gene51554.t1
chr1.4 exon 8669354 8669452 8669354 ID=MS.gene51554.t1.exon8;Parent=MS.gene51554.t1
chr1.4 CDS 8669354 8669452 8669354 ID=cds.MS.gene51554.t1;Parent=MS.gene51554.t1
chr1.4 exon 8669546 8669612 8669546 ID=MS.gene51554.t1.exon9;Parent=MS.gene51554.t1
chr1.4 CDS 8669546 8669612 8669546 ID=cds.MS.gene51554.t1;Parent=MS.gene51554.t1
chr1.4 exon 8670426 8670594 8670426 ID=MS.gene51554.t1.exon10;Parent=MS.gene51554.t1
chr1.4 CDS 8670426 8670594 8670426 ID=cds.MS.gene51554.t1;Parent=MS.gene51554.t1
chr1.4 exon 8670714 8671269 8670714 ID=MS.gene51554.t1.exon11;Parent=MS.gene51554.t1
chr1.4 CDS 8670714 8671269 8670714 ID=cds.MS.gene51554.t1;Parent=MS.gene51554.t1
Gene Sequence

>MS.gene51554

ATGGATTCTCCAGAAGCTTCTCAGATTAAGAACATTTCTTCTTCTTCCTCTCTCTCCTCAACTCTCAATGCCGCCACCGCCATCACCAATCCTTCTGATGAATCCCCCCAAGTTCAAGTATACATCATTTCATTTTCATACCAATTAATTAATTATGCTACCCCCCTTTGATTGGGGTTCTTGACACGATTTTCGAGTTTAATTCTTCTTCTTTACGATTATTATGTTATGGAACTTCATCATGATATGATACTATCAATGTTAACTCTGTCTGTCTTTATGTTTGGAATCTAATCTAATGAATTTATACCATTTTATTTCATTTATTGTGTTAGACATGTTTGGAATTACATTTGTTTTCGATGCCTACTTTTTGTTTCATTCCATTCATCAAACAACATTGTCTCGTTATCAATTAGATCGGTTGATTCTTAGATCCTTAGACCGGATACTGAGTTTTCACAAGAAAATAAAAAAAAGGTTATCTATTAAGTAAGTTTTAATCAATGTTGTCCGTCGTGGATTGCGAAAAATAGCATTTTGTTCAAATTCCACTATGTTACGGCGCCGTTATTTGACATTGCATTGTACTGAATACCATATCTCTGGAACAATATTCTGCTACACTATAGCCACTATTTGACAGTGCTGTGTTCATGTACTTAAAGAGGTTTTACGCACTTGTGCGTTGTGGTGCCGCACTTTGATAATTGACTGTTGTGAGAGACTTGTTTGGAATTATATTTGTTTGATTGGATAAAATTCACTAGACTTGCTTTTGGTCTATCCTCTCTTATGTTAATTAACCCACACCGTCTCATTTTTGCATTAAAATGCTTATCAATTAGGCGTATGTGCATTGTCGGACTGGTATCTTGTGTTGATTGTGTTTCTAGAACCGTCTTTTTTGTTTAGAGATGTCTAGACTAGAGAGTAGTGTGTTATTTTTGTTGACTTGTGTAGTATTTTTCAGACTCTTTCATTTCATTTCTAGTATCACGAAAAAGGAATGAAATTTACATCTTGTCGTCTTCTTCATTTCAGGAATCTCCCTTTTTGAGATTTGTCAACACTCTGTCTCCAATAAAGCCTGTCAAGGCTTCTCATGCGACACATGGGTTTCTCGGACTCAATTCTCCACCTCTCGTATTCAAGTCTCCGCGTATCAGTGCTCCCCACCGTGAAACACAATACTCGGAAAGGTTTGTGACTTCAATTTTGTGTTCGTGTCTTTTGTTATTGACGATGCACTCGCTATTTATTGACAAAATTTGTATGTATCAGGCTTGAAGGTACCCATTTATCAGATACAGAAACATCTCAAAGTAACGTAGGAGACAACAGTCTTGGTGAAGCTCGTAGTGATTTGAAGAAATTGAATTCTCAGCAGCCACTGCCAGAGGTGTTTATAACAGTTGCTCAAAAGGATTTTGACCTCAAGAATGATGCGAATACCCAAAGCTGCAGTCCTCCAGCATCTGTCGATGAATATTTGGCTGATCCCGTGGACGATCAAATGTATCCAGTCAACCCAGAAATGGAACAATCTACTGATGCGGTTGGGTCATCATCACTAACTGAGTCGGAGAAAGTTATATTAAAATTTGATAGGAGTGACGGTCCTAGTAACATAGCAGAAGAACTTTTGCCTTTGTTGGAGGAATCTAATATGGTTCATCAAGAAAGGACAACATATGTTGAAAATCCTGCAACAATTGAAGGGGAGAAAAATGGTGCTGAATTGGTTTCTCAAGAGCACATAAACTTAGGCTCGAGTTCAGGTGCAGATGTTTTTGATAAACAATATTGCCATGATTCACTTCCCCAGGTAACTAAGCTCTTGCTGTCTATACTCTATATTTATAATGCTGATATAGGGACGTCAGTTTTCATATATATGATTAGTGTGAGCTAGATGTCCTCTAGTCTCTTTTGATTGATCTATAAAATTTCAAGCTTCAGTGTGCAGGAAATGATCAACAGCATCAAAGTGACTGTGCACCTCAATTGATGCCTGATCCTATCCAGGCTGTTAAGGAATTTGAAAATTGCAGTGAGATGGTGTCATCCTCACAAGTAAATTCAGAGAATATCCCACAAGATGGTTCTGAGGTAATTGATTTTTTTTCTTTCAGGTTTATTGCATTCCTCTGATGAATATATGAACTTTTGTTTAGATTTTGCTGTCTTTTCATGCTTTCCCTCCTCTCTGAATGATTTTGTTTATGTCTGTGTTCTTTTAGTCTTTAACACTAAATACTAGTCTCTTTAGAGGTTAATGACTCCAGGCTTGAATACACTTTTATTTTTTTTAATCATTGGCATCTACTATCTCCAATTAAAGAAGAGCACAGTACATGTATTTTGTTTGCACTTGGCACATTCAATCTTATAAATCTAATAATGCTTCATTGATCTAGTTTGTTTATGGCCATTTGCATGCATCATGGCAGGATTTTTTTAACGAAATTAGCAGAAGTGGTATACTGCATATTTCTGCATAAGATAGGTGCTGTAATCAGATTTCTCTAACTGAAAAATCCCCCCATTTTTCTGCTTATCAAGTTTTGCTTTGTTTGGAGGTTTCAAAATTGAGGATCTCTGATAAATACAGTTTTTTCAACAAGATTGCTAATAAAATGCGAGTCCTGATATTACATCATGGACTCAAGGTTAAGGGCATCTCTTAGAATAAGGAAGTCAGTCTTCTGTTTATGAATATATAGCATGAAATATCTTTTGAACAAAGAAAAGTCAGCAATAATTTATTGGCTACAAGGTTTTAGTCATGTAGGATGAGACTACAGTGGTGTAATGGCATTATCTACTTGGCAATCATACACAGAGTTGCATTTTGATTATCAGGAACTTGCATTTTATTGTTCAATTAAATGAAGATTTTCTGTCTGCAATATAATAATTGTTACAGTCAATGCAGGCTAGCCTAAAGTATCATGGCATCCGTAGACGCTGCCTACAATTTGGGGAAGCTGCTTCCGTTGTTCTTGGAAGTAATAAGTCTCATGTGAAATTGAATACAACTTCAAGCAACGCAAAAATGGTTTCTGTGACAGTTTCCAAGCCACCAGGCATTGGGTTGCATTTAAATAGCATTATAAATGCAATGCCACCTAGTTGTGCTTCAACTACTGGTGTGAGATTATCAGATGGTATACAGGGGTCCAAATCTTCTATAAGTTTGCATATAGTGGAAAACGTGGCAAGATCCTCAACTCCGTCCAATATGGATGATCAATCTTTTATTGATACTAAGAATGAGAGCCATGAAACTGATGCTTCAGTAGTTGCAGATTCTTTCATTTCCGAGTCTCCTATCTTGACAGAATCCATCGACCTATATCCGGCAAATGCACCTGATAAGAGGAGGGTACGCCCCACAGATGCTGAGGAATTCAACCATCCTAGCACCTCCAGGAAAAAGTTAGTTATCATGATCTTTCTCATAGGTCATTATTTTTATTCTTTACCTGTTTGCTAGTTTTACCAAATATTGCATTGCTCTATATAGGAAGAAAACAAGTACTGATGATGCCAATGGACCTAAGACGTGCAACTGTAAGAAGAGTAAATGTTTGAAACTGTGAGTATATTTTAAATATGTTTTGATACCATACTTTCTATGATATGCAATATCTATGTATTTTGATTTGAGTACTTTGCAGTTACTGTGATTGTTTTGGTGCTGGAATCTTCTGTGGCGACGGTTGTGCTTGCGAAGGCTGTGGTAACAGAGTAGAATTTCAGGATAAAGTTGTTGAAACAAAACAGCAAATTGAATCCCGTAATCCACAAGCATTTGCTCCCAAGATTGTACCATGTGCAGCTGATGTTCCACTGAATAATATGGTATAAGATCTTCATATATTACTGTTGTTCAACCTGCTAGCCTTAAAAAATTAGGTGATATTTTGATGCGACCTTTGCAGGAAGATGTGAATATGACAACACCGGCATCAGCTAGGCACAAAAGAGGTTGCAATTGCAAAAGGTCAAAGTGTACAAAAAAATACTGTGAATGTTTTCAGGTTGTGTATTTTATCCATATTTCTATATGCTCTAAATATTTTTACTGTGTCTGCTAATATATTTTTTATTTTATTTTAAATATTTGTCAAAAGGCTAACGTTGGATGCTCGACTGGATGTCGATGTGATGGATGTATGAATGTCTTTGGCAAGAGAGAAGGTTAGAGCTCATAGTATGAATAGCTATTTTAAATACTTAATGCACTACACAGTTTAACTTGTTGTCTGGTCAGTATAAATGTTATGGATTGATGTTGGGAGGTTTTGATGTTTCCAAATACTAGTCCTTATAAGGAAAATTGTTGAGGCCAGCCCAGCACATCTTTTAAGTTTTTTAATGATGTGTAGATTTGAATCCAGAACCTCAACTCAAACCCTACCCACCACCAAGTCCAGGTAGAATGCTAGAGATGGTCATATTTGCCATACAAATGACACCCCTTTGCTTTATGCTGCCAGTAATAATCTCTGCGGTGCACTTTTGGAAGTGGTGGGTTTGTTTTTAAAGAAGTATTAGGTCTCGCGAACTTATGAATTGAATCAATTACGATTAAATAACTTTTTAGTGTTTCTAATGTACACTATTCCCAATTTAGTTTCTAAAATTTCTAGTTGATTTCAATCCCTGAAATACAATAACATAATTTTTGGTACTTCTTTTGGTTTGAGTTCTTGTAACTTTGTCCACATTAAAATGAATACATATGGTCCACATGTTATAGGAATTTATTTCAGTATGGACAAATATTTTGAAAAACTAAATTAAAAGAATGAAAATCAAAAGCAATTTTTCTTAAATTTTAGGGGTTCAAACTGGCTAGAATTTCTTGAGAGACTAAACTGAAAGTTGGTGTGAATTACAGAGACTAGAATTATTTTAGCTTTTAAAGTATAGTTGACATCCACATGAGGGAAGAGTGGGTGCAGATCATTAAATGATTCTGTTAATGTATTACACATTTTTTAAATGCAGATTTTGTGGCAATGGAACATGCTTCTAGCAATGAAAGGGAGAGCAACATTGTTGAAGAAGGGTTGGATGACAAACTGCACAAAAGACAGAAAATTGTGACAATCAGGACAGACTTGTTACGACCAGCAAATCACCTCTCACCTGTAACACCATTGTTGCAATGCTCTGAGTAAGATTGCTTACACTGCAAGTTTTTCTATGTTGTATAAATAAGAAGTTATATTCTGAGTATTTAATTATTTTGACGTCCTTTCATTTGTGCTGATTGGCCTTTTTGCATTTGTCCAGCCAAGGCAAGCAGGGTGCAAAGTCTAGACATACTTCTGCAAATTTGACCAAATCTTCTAAAAAACCACGCAGCAGTCTGGCACATTCGAAGTCGAATGATTCTCAAAAGAATGCACCTACACGTTCTTCATCTACAGAAAATGAGTGGATAGATCTTCCACCATACCAACTCTCCAATAGATGCGGTATTCGCCAGTTATCTGGGGGCTCTCTTCGTTGGCGCGGTAGTTCACCGATTACCCCAAGCGCTAACTTAGATGATGAATCAGATGGTAAGCTCTTTGACATTATAGAAGATGAAACACCTGATGTATTGAAGGAAGCTTCAACTCCCATCAAGTCTGTGAAAGCAAATTCTCCAATCCAAAAGAGAGTTTCTCCTCCACAGAGCCATCTACTTCGGATTGGATCAAGCTCCTCAGGTGGCTTGAAAAGTGGCAGGAAATTTATATTGCAATCTGTTCCTTCATTCCCGCCGTTGACCCCTTGCGCTGATTCTAAAGTCCTTTGCAATGGCAATGAGGATTCGGGTAACAGCACAGATAAAGTGACATAA

Protein sequence

>MS.gene51554.t1

MDSPEASQIKNISSSSSLSSTLNAATAITNPSDESPQVQESPFLRFVNTLSPIKPVKASHATHGFLGLNSPPLVFKSPRISAPHRETQYSERLEGTHLSDTETSQSNVGDNSLGEARSDLKKLNSQQPLPEVFITVAQKDFDLKNDANTQSCSPPASVDEYLADPVDDQMYPVNPEMEQSTDAVGSSSLTESEKVILKFDRSDGPSNIAEELLPLLEESNMVHQERTTYVENPATIEGEKNGAELVSQEHINLGSSSGADVFDKQYCHDSLPQCAGNDQQHQSDCAPQLMPDPIQAVKEFENCSEMVSSSQVNSENIPQDGSEASLKYHGIRRRCLQFGEAASVVLGSNKSHVKLNTTSSNAKMVSVTVSKPPGIGLHLNSIINAMPPSCASTTGVRLSDGIQGSKSSISLHIVENVARSSTPSNMDDQSFIDTKNESHETDASVVADSFISESPILTESIDLYPANAPDKRRVRPTDAEEFNHPSTSRKKKKTSTDDANGPKTCNCKKSKCLKLYCDCFGAGIFCGDGCACEGCGNRVEFQDKVVETKQQIESRNPQAFAPKIVPCAADVPLNNMEDVNMTTPASARHKRGCNCKRSKCTKKYCECFQANVGCSTGCRCDGCMNVFGKREDFVAMEHASSNERESNIVEEGLDDKLHKRQKIVTIRTDLLRPANHLSPVTPLLQCSDQGKQGAKSRHTSANLTKSSKKPRSSLAHSKSNDSQKNAPTRSSSTENEWIDLPPYQLSNRCGIRQLSGGSLRWRGSSPITPSANLDDESDGKLFDIIEDETPDVLKEASTPIKSVKANSPIQKRVSPPQSHLLRIGSSSSGGLKSGRKFILQSVPSFPPLTPCADSKVLCNGNEDSGNSTDKVT