Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071699.t1 | PNY04801.1 | 90.8 | 400 | 32 | 2 | 1 | 395 | 87 | 486 | 2.90E-204 | 721.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071699.t1 | Q8L5Y9 | 85.0 | 379 | 51 | 4 | 1 | 373 | 87 | 465 | 9.2e-183 | 641.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071699.t1 | A0A2K3NP46 | 90.8 | 400 | 32 | 2 | 1 | 395 | 87 | 486 | 2.1e-204 | 721.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene071699 | 0.816291 | 5.96E-52 | -1.69E-46 |
| MS.gene04917 | MS.gene071699 | 0.815791 | 7.72E-52 | -1.69E-46 |
| MS.gene049264 | MS.gene071699 | 0.846448 | 2.16E-59 | -1.69E-46 |
| MS.gene049378 | MS.gene071699 | 0.84035 | 9.17E-58 | -1.69E-46 |
| MS.gene049585 | MS.gene071699 | 0.814381 | 1.59E-51 | -1.69E-46 |
| MS.gene04984 | MS.gene071699 | 0.817006 | 4.12E-52 | -1.69E-46 |
| MS.gene04991 | MS.gene071699 | -0.821623 | 3.66E-53 | -1.69E-46 |
| MS.gene050226 | MS.gene071699 | 0.829409 | 5.23E-55 | -1.69E-46 |
| MS.gene050228 | MS.gene071699 | 0.812977 | 3.23E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene071699 | 0.842133 | 3.12E-58 | -1.69E-46 |
| MS.gene050442 | MS.gene071699 | 0.807138 | 5.85E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene071699 | 0.808767 | 2.63E-50 | -1.69E-46 |
| MS.gene050629 | MS.gene071699 | -0.81781 | 2.72E-52 | -1.69E-46 |
| MS.gene050654 | MS.gene071699 | 0.80732 | 5.36E-50 | -1.69E-46 |
| MS.gene050762 | MS.gene071699 | 0.886829 | 2.43E-72 | -1.69E-46 |
| MS.gene050763 | MS.gene071699 | 0.884243 | 2.26E-71 | -1.69E-46 |
| MS.gene050826 | MS.gene071699 | 0.821734 | 3.45E-53 | -1.69E-46 |
| MS.gene051102 | MS.gene071699 | 0.806483 | 8.05E-50 | -1.69E-46 |
| MS.gene051210 | MS.gene071699 | 0.831604 | 1.52E-55 | -1.69E-46 |
| MS.gene051800 | MS.gene071699 | 0.820024 | 8.53E-53 | -1.69E-46 |
| MS.gene05216 | MS.gene071699 | 0.805362 | 1.38E-49 | -1.69E-46 |
| MS.gene052242 | MS.gene071699 | -0.820406 | 6.98E-53 | -1.69E-46 |
| MS.gene052609 | MS.gene071699 | 0.81933 | 1.23E-52 | -1.69E-46 |
| MS.gene052665 | MS.gene071699 | 0.802606 | 5.18E-49 | -1.69E-46 |
| MS.gene052674 | MS.gene071699 | 0.803241 | 3.83E-49 | -1.69E-46 |
| MS.gene052675 | MS.gene071699 | 0.803358 | 3.62E-49 | -1.69E-46 |
| MS.gene052677 | MS.gene071699 | 0.812878 | 3.40E-51 | -1.69E-46 |
| MS.gene052994 | MS.gene071699 | 0.836253 | 1.04E-56 | -1.69E-46 |
| MS.gene054379 | MS.gene071699 | 0.876138 | 1.77E-68 | -1.69E-46 |
| MS.gene054468 | MS.gene071699 | 0.808838 | 2.54E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene071699 | 0.810862 | 9.33E-51 | -1.69E-46 |
| MS.gene054826 | MS.gene071699 | 0.819508 | 1.12E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene071699 | 0.820342 | 7.22E-53 | -1.69E-46 |
| MS.gene055311 | MS.gene071699 | 0.802973 | 4.35E-49 | -1.69E-46 |
| MS.gene055469 | MS.gene071699 | 0.806052 | 9.92E-50 | -1.69E-46 |
| MS.gene055864 | MS.gene071699 | 0.814055 | 1.87E-51 | -1.69E-46 |
| MS.gene055926 | MS.gene071699 | 0.805578 | 1.25E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene071699 | 0.844838 | 5.90E-59 | -1.69E-46 |
| MS.gene056507 | MS.gene071699 | 0.803562 | 3.29E-49 | -1.69E-46 |
| MS.gene056873 | MS.gene071699 | 0.80181 | 7.55E-49 | -1.69E-46 |
| MS.gene05761 | MS.gene071699 | 0.827037 | 1.95E-54 | -1.69E-46 |
| MS.gene057869 | MS.gene071699 | 0.83625 | 1.04E-56 | -1.69E-46 |
| MS.gene057929 | MS.gene071699 | 0.836946 | 6.94E-57 | -1.69E-46 |
| MS.gene058081 | MS.gene071699 | 0.811748 | 5.99E-51 | -1.69E-46 |
| MS.gene058289 | MS.gene071699 | 0.834439 | 3.00E-56 | -1.69E-46 |
| MS.gene058638 | MS.gene071699 | 0.856719 | 2.66E-62 | -1.69E-46 |
| MS.gene058639 | MS.gene071699 | 0.856745 | 2.61E-62 | -1.69E-46 |
| MS.gene058647 | MS.gene071699 | 0.819557 | 1.09E-52 | -1.69E-46 |
| MS.gene058758 | MS.gene071699 | 0.83425 | 3.34E-56 | -1.69E-46 |
| MS.gene059439 | MS.gene071699 | 0.824872 | 6.38E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene071699 | 0.840924 | 6.48E-58 | -1.69E-46 |
| MS.gene059719 | MS.gene071699 | 0.802419 | 5.66E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene071699 | 0.804444 | 2.15E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene071699 | 0.804975 | 1.67E-49 | -1.69E-46 |
| MS.gene060084 | MS.gene071699 | 0.801668 | 8.08E-49 | -1.69E-46 |
| MS.gene060373 | MS.gene071699 | 0.816497 | 5.36E-52 | -1.69E-46 |
| MS.gene060380 | MS.gene071699 | 0.842562 | 2.40E-58 | -1.69E-46 |
| MS.gene060400 | MS.gene071699 | 0.840472 | 8.52E-58 | -1.69E-46 |
| MS.gene06052 | MS.gene071699 | 0.837025 | 6.63E-57 | -1.69E-46 |
| MS.gene060637 | MS.gene071699 | 0.815291 | 9.97E-52 | -1.69E-46 |
| MS.gene060683 | MS.gene071699 | 0.803103 | 4.09E-49 | -1.69E-46 |
| MS.gene060851 | MS.gene071699 | 0.803875 | 2.83E-49 | -1.69E-46 |
| MS.gene060852 | MS.gene071699 | 0.801355 | 9.37E-49 | -1.69E-46 |
| MS.gene060932 | MS.gene071699 | 0.805453 | 1.33E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene071699 | 0.838162 | 3.39E-57 | -1.69E-46 |
| MS.gene06121 | MS.gene071699 | 0.802489 | 5.48E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTCCAAATTAATA+TGG | + | 21149:6499-6518 | MS.gene071699:intron | 10.0% |
| !!! | ACTTATATAATTTTTTGTTT+AGG | + | 21149:7166-7185 | MS.gene071699:intron | 10.0% |
| !! | AAAAACTATATCAGAAAAAA+AGG | + | 21149:6638-6657 | MS.gene071699:CDS | 15.0% |
| !! | AGCTTAAAATTTAAATATGT+AGG | + | 21149:5660-5679 | MS.gene071699:intron | 15.0% |
| !! | TTTAAATAATAGATTAGATG+AGG | - | 21149:6801-6820 | MS.gene071699:intergenic | 15.0% |
| !!! | TATTTTTTTATCAATCAACA+TGG | + | 21149:6546-6565 | MS.gene071699:intron | 15.0% |
| !!! | TCAATGTAGTATTTTAATTT+AGG | - | 21149:7140-7159 | MS.gene071699:intergenic | 15.0% |
| !!! | TTGTTTTATGATAATAGTAA+AGG | - | 21149:5794-5813 | MS.gene071699:intergenic | 15.0% |
| !! | CAAATAACAAATGAAATGAA+CGG | - | 21149:5122-5141 | MS.gene071699:intergenic | 20.0% |
| !! | CGAAAATGATAATTAATAAC+AGG | - | 21149:5402-5421 | MS.gene071699:intergenic | 20.0% |
| !! | GCTTATATTTATGAACTAAA+TGG | - | 21149:6759-6778 | MS.gene071699:intergenic | 20.0% |
| !!! | AAGTTGAAGAGAATATTTTT+TGG | + | 21149:7001-7020 | MS.gene071699:CDS | 20.0% |
| !!! | TTATTTTTTTTTCCCTTGTA+AGG | + | 21149:5576-5595 | MS.gene071699:intron | 20.0% |
| ! | ACATGGTGAATTTATGATTA+TGG | + | 21149:4795-4814 | MS.gene071699:intron | 25.0% |
| ! | ACTCAAAGTTACCTTAATTA+TGG | - | 21149:4883-4902 | MS.gene071699:intergenic | 25.0% |
| ! | ATTACTCATCTCAATAAGTA+AGG | - | 21149:5490-5509 | MS.gene071699:intergenic | 25.0% |
| ! | CAACATTAACTAGAAGATAA+GGG | - | 21149:6022-6041 | MS.gene071699:intergenic | 25.0% |
| ! | CTATGTTTAAACTATTGACA+AGG | + | 21149:6300-6319 | MS.gene071699:intron | 25.0% |
| ! | GATCTTATTGAAAACTACAT+CGG | + | 21149:5767-5786 | MS.gene071699:intron | 25.0% |
| ! | GGTCTTAAATAATTCTAGAT+TGG | + | 21149:6582-6601 | MS.gene071699:intron | 25.0% |
| ! | TAAAAGGAAGAAAACATTGA+AGG | + | 21149:4530-4549 | MS.gene071699:CDS | 25.0% |
| ! | TCACTTTGTCAAATTTGAAA+CGG | + | 21149:4611-4630 | MS.gene071699:CDS | 25.0% |
| ! | TCATCTACTCCATATTAATT+TGG | - | 21149:6511-6530 | MS.gene071699:intergenic | 25.0% |
| !! | ATCAAAAGTGTAATGAAGTT+AGG | - | 21149:6085-6104 | MS.gene071699:intergenic | 25.0% |
| !! | GAATTTTTCTCTTGCTTATA+GGG | + | 21149:4817-4836 | MS.gene071699:intron | 25.0% |
| !! | GATGTATTGTTTCTTTGAAT+AGG | + | 21149:5455-5474 | MS.gene071699:intron | 25.0% |
| !! | TGTAGTTTTCAATAAGATCT+TGG | - | 21149:5766-5785 | MS.gene071699:intergenic | 25.0% |
| !!! | AATTTTTTGTTTAGGTCCAA+TGG | + | 21149:7174-7193 | MS.gene071699:intron | 25.0% |
| !!! | ATTGGTTTTTAATAACGAGA+GGG | - | 21149:5086-5105 | MS.gene071699:intergenic | 25.0% |
| !!! | GCTTTCTTTTTATTTGTCAT+AGG | + | 21149:6145-6164 | MS.gene071699:intron | 25.0% |
| !!! | TGTCATTTAGTTTGGAATTT+GGG | + | 21149:5816-5835 | MS.gene071699:intron | 25.0% |
| !!! | TTGAAGAGAATATTTTTTGG+AGG | + | 21149:7004-7023 | MS.gene071699:CDS | 25.0% |
| !!! | TTTATTTGTCATAGGTTGAT+GGG | + | 21149:6153-6172 | MS.gene071699:intron | 25.0% |
| !!! | TTTTATTTGTCATAGGTTGA+TGG | + | 21149:6152-6171 | MS.gene071699:intron | 25.0% |
| !!! | TTTTGGAGGATTTTTTATCA+GGG | + | 21149:7018-7037 | MS.gene071699:CDS | 25.0% |
| !!! | TTTTTGGAGGATTTTTTATC+AGG | + | 21149:7017-7036 | MS.gene071699:CDS | 25.0% |
| AAATGCTCTTTACCTTACAA+GGG | - | 21149:5591-5610 | MS.gene071699:intergenic | 30.0% | |
| AAATGTCCATCATATAGAGA+AGG | + | 21149:6473-6492 | MS.gene071699:intron | 30.0% | |
| AATGTATGACAAAAGCTAAC+AGG | + | 21149:6115-6134 | MS.gene071699:intron | 30.0% | |
| AATGTCCATCATATAGAGAA+GGG | + | 21149:6474-6493 | MS.gene071699:intron | 30.0% | |
| AATTATCTTGAGCAGGTAAT+CGG | - | 21149:7418-7437 | MS.gene071699:intergenic | 30.0% | |
| ACTACCTTATGTTAACACTT+TGG | + | 21149:5626-5645 | MS.gene071699:intron | 30.0% | |
| AGAAGAAAACTATAGAAGAC+AGG | - | 21149:5882-5901 | MS.gene071699:intergenic | 30.0% | |
| AGATGAAATGAATTGTCTTG+TGG | + | 21149:5346-5365 | MS.gene071699:CDS | 30.0% | |
| ATATGACTCAAAAAGAAGCA+AGG | - | 21149:5557-5576 | MS.gene071699:intergenic | 30.0% | |
| ATCCAAGTACATGTGTTAAA+AGG | + | 21149:6898-6917 | MS.gene071699:intron | 30.0% | |
| CAATTTGAACAAACTCTTTC+TGG | - | 21149:5983-6002 | MS.gene071699:intergenic | 30.0% | |
| CCAACATTAACTAGAAGATA+AGG | - | 21149:6023-6042 | MS.gene071699:intergenic | 30.0% | |
| TGATAAGTAGCAAAAGCTTA+CGG | - | 21149:5019-5038 | MS.gene071699:intergenic | 30.0% | |
| TGATCGAAATGCCATAATTA+AGG | + | 21149:4869-4888 | MS.gene071699:intron | 30.0% | |
| TTGTTTAAGTCAGCTTGATA+GGG | + | 21149:5430-5449 | MS.gene071699:intron | 30.0% | |
| TTTATGAGTTACGAAAAGCA+TGG | + | 21149:7252-7271 | MS.gene071699:CDS | 30.0% | |
| TTTGTTTAAGTCAGCTTGAT+AGG | + | 21149:5429-5448 | MS.gene071699:intron | 30.0% | |
| ! | AAACAAGCTGTCATTTAGTT+TGG | + | 21149:5808-5827 | MS.gene071699:intron | 30.0% |
| ! | AAGTCTTTCTTTGAAAAGGT+CGG | - | 21149:5306-5325 | MS.gene071699:intergenic | 30.0% |
| ! | AAGTTCTAACACTTCTTAGT+AGG | + | 21149:5923-5942 | MS.gene071699:intron | 30.0% |
| ! | AGCTGACTTAAACAAAATGT+AGG | - | 21149:5425-5444 | MS.gene071699:intergenic | 30.0% |
| ! | ATGCATTCATTTTGTGATGA+AGG | + | 21149:5253-5272 | MS.gene071699:intron | 30.0% |
| ! | CACTTTGTCAAATTTGAAAC+GGG | + | 21149:4612-4631 | MS.gene071699:CDS | 30.0% |
| ! | CATTACACTTTTGATCTCTT+TGG | + | 21149:6090-6109 | MS.gene071699:intron | 30.0% |
| ! | CCTTATCTTCTAGTTAATGT+TGG | + | 21149:6020-6039 | MS.gene071699:CDS | 30.0% |
| ! | CTCTACTGTATTTTTCTGTT+TGG | + | 21149:4936-4955 | MS.gene071699:intron | 30.0% |
| ! | GATAAGGGAACAAATCATTT+TGG | - | 21149:6007-6026 | MS.gene071699:intergenic | 30.0% |
| ! | GGAATTTTTCTCTTGCTTAT+AGG | + | 21149:4816-4835 | MS.gene071699:intron | 30.0% |
| ! | TGAACCAAAGTGTTAACATA+AGG | - | 21149:5633-5652 | MS.gene071699:intergenic | 30.0% |
| ! | TTCCTTTTAACACATGTACT+TGG | - | 21149:6903-6922 | MS.gene071699:intergenic | 30.0% |
| ! | TTTTTCCCTTCTCTATATGA+TGG | - | 21149:6482-6501 | MS.gene071699:intergenic | 30.0% |
| !! | CTGTCATTTAGTTTGGAATT+TGG | + | 21149:5815-5834 | MS.gene071699:intron | 30.0% |
| !! | CTTCTTAGCTTTTCATGTTT+GGG | + | 21149:5732-5751 | MS.gene071699:intron | 30.0% |
| !! | TAAGGTAAAGAGCATTTGTT+TGG | + | 21149:5594-5613 | MS.gene071699:intron | 30.0% |
| !! | TTATTTGTCATAGGTTGATG+GGG | + | 21149:6154-6173 | MS.gene071699:intron | 30.0% |
| !! | TTCTTAGCTTTTCATGTTTG+GGG | + | 21149:5733-5752 | MS.gene071699:intron | 30.0% |
| !! | TTTCATTTGCTGTTCAATAC+TGG | + | 21149:7065-7084 | MS.gene071699:CDS | 30.0% |
| !!! | CATTGGTTTTTAATAACGAG+AGG | - | 21149:5087-5106 | MS.gene071699:intergenic | 30.0% |
| !!! | GTTTTAGAATGCTGTCAAAA+TGG | + | 21149:5171-5190 | MS.gene071699:intron | 30.0% |
| !!! | TTTGGAGGATTTTTTATCAG+GGG | + | 21149:7019-7038 | MS.gene071699:CDS | 30.0% |
| AAAACATTGAAGGAGCGATT+AGG | + | 21149:4540-4559 | MS.gene071699:CDS | 35.0% | |
| AAACATTGAAGGAGCGATTA+GGG | + | 21149:4541-4560 | MS.gene071699:CDS | 35.0% | |
| AACATCCAATTATCTTGAGC+AGG | - | 21149:7425-7444 | MS.gene071699:intergenic | 35.0% | |
| AACGGAAAAATCATCGACAT+TGG | - | 21149:5104-5123 | MS.gene071699:intergenic | 35.0% | |
| ACATATCACTCTCTCTTCTA+CGG | + | 21149:6685-6704 | MS.gene071699:CDS | 35.0% | |
| ACTGGTACATAAAATGCCTA+AGG | + | 21149:7083-7102 | MS.gene071699:intron | 35.0% | |
| AGCAAATTTCTTGCTTAAGG+TGG | + | 21149:5373-5392 | MS.gene071699:intron | 35.0% | |
| AGGAGCAAATTTCTTGCTTA+AGG | + | 21149:5370-5389 | MS.gene071699:CDS | 35.0% | |
| CAAATGCTCTTTACCTTACA+AGG | - | 21149:5592-5611 | MS.gene071699:intergenic | 35.0% | |
| CCAAACATGAAAAGCTAAGA+AGG | - | 21149:5734-5753 | MS.gene071699:intergenic | 35.0% | |
| CGGATGATTTCATACAACAT+CGG | + | 21149:6705-6724 | MS.gene071699:CDS | 35.0% | |
| CTGGTACATAAAATGCCTAA+GGG | + | 21149:7084-7103 | MS.gene071699:intron | 35.0% | |
| GATTACCTGCTCAAGATAAT+TGG | + | 21149:7417-7436 | MS.gene071699:CDS | 35.0% | |
| GGATGTTCTTGTTCTTTAGT+TGG | + | 21149:7438-7457 | MS.gene071699:CDS | 35.0% | |
| TCCAAAACTTGAAGCAATAG+TGG | - | 21149:6619-6638 | MS.gene071699:intergenic | 35.0% | |
| TTAGTTGAAAGGTTTCCGAT+GGG | + | 21149:7300-7319 | MS.gene071699:CDS | 35.0% | |
| TTTAGCACATTAGCACAACA+TGG | + | 21149:4778-4797 | MS.gene071699:intron | 35.0% | |
| ! | ATGAGGCAGAATAACAGTTT+TGG | - | 21149:6784-6803 | MS.gene071699:intergenic | 35.0% |
| ! | CACCAAGTCTTTCTTTGAAA+AGG | - | 21149:5310-5329 | MS.gene071699:intergenic | 35.0% |
| ! | GACCTTTTCAAAGAAAGACT+TGG | + | 21149:5305-5324 | MS.gene071699:CDS | 35.0% |
| ! | TAGCTCTATTATCTCCTTTC+TGG | - | 21149:6373-6392 | MS.gene071699:intergenic | 35.0% |
| ! | TCCTTTTATCATCGTCTGAT+TGG | - | 21149:4518-4537 | MS.gene071699:intergenic | 35.0% |
| ! | TGATCAAGGTGCATTTTTCT+TGG | + | 21149:6057-6076 | MS.gene071699:intron | 35.0% |
| ! | TGGTGGTTTGGATTATTCTA+AGG | + | 21149:6418-6437 | MS.gene071699:CDS | 35.0% |
| ! | TTTTCTCTTGCTTATAGGGT+TGG | + | 21149:4821-4840 | MS.gene071699:intron | 35.0% |
| !! | CCTTCTTAGCTTTTCATGTT+TGG | + | 21149:5731-5750 | MS.gene071699:intron | 35.0% |
| !! | CTTCTAGTTAATGTTGGTTC+CGG | + | 21149:6026-6045 | MS.gene071699:CDS | 35.0% |
| !! | TCCACTATTGCTTCAAGTTT+TGG | + | 21149:6615-6634 | MS.gene071699:CDS | 35.0% |
| !!! | TTTGAGTCTGTCTGCTTTTT+TGG | + | 21149:4896-4915 | MS.gene071699:intron | 35.0% |
| ACTTGGCGATTTGAATGAGA+AGG | + | 21149:7359-7378 | MS.gene071699:CDS | 40.0% | |
| AGAAGCTTTCCTATTCTTGG+TGG | + | 21149:4582-4601 | MS.gene071699:CDS | 40.0% | |
| AGAGAGAGTGATATGTCTTC+AGG | - | 21149:6681-6700 | MS.gene071699:intergenic | 40.0% | |
| AGGAGAAGCTTTCCTATTCT+TGG | + | 21149:4579-4598 | MS.gene071699:CDS | 40.0% | |
| CAACATGGCTGAGTATTATC+TGG | + | 21149:6561-6580 | MS.gene071699:intron | 40.0% | |
| CACCTTGATCATACTAACAC+CGG | - | 21149:6048-6067 | MS.gene071699:intergenic | 40.0% | |
| CAGAGAGATGAAAAGAACAC+AGG | - | 21149:6951-6970 | MS.gene071699:intergenic | 40.0% | |
| GAAAAGAACACAGGATTGTC+AGG | - | 21149:6942-6961 | MS.gene071699:intergenic | 40.0% | |
| GAAATGAATTGTCTTGTGGC+AGG | + | 21149:5350-5369 | MS.gene071699:CDS | 40.0% | |
| GACTGTTAACAAAGTGCAAG+AGG | + | 21149:6240-6259 | MS.gene071699:CDS | 40.0% | |
| GATTTCATACAACATCGGTC+AGG | + | 21149:6710-6729 | MS.gene071699:CDS | 40.0% | |
| GCCAATCAGACGATGATAAA+AGG | + | 21149:4514-4533 | MS.gene071699:CDS | 40.0% | |
| GTTAGTTGAAAGGTTTCCGA+TGG | + | 21149:7299-7318 | MS.gene071699:CDS | 40.0% | |
| TAGGGCTTTCTAATGGTAAC+AGG | + | 21149:4559-4578 | MS.gene071699:CDS | 40.0% | |
| TATACTGGTGGCAAGATACA+TGG | + | 21149:7330-7349 | MS.gene071699:CDS | 40.0% | |
| TCAAAAAGAAGCAAGGTCAG+AGG | - | 21149:5550-5569 | MS.gene071699:intergenic | 40.0% | |
| TCTTCTGCTTTGATGCTATG+AGG | + | 21149:5220-5239 | MS.gene071699:intron | 40.0% | |
| TGGTGCATCAGTTAGTTGAA+AGG | + | 21149:7289-7308 | MS.gene071699:CDS | 40.0% | |
| TGGTGTGTTCAATTCAGCTT+AGG | + | 21149:7458-7477 | MS.gene071699:CDS | 40.0% | |
| TGTATCTTGCCACCAGTATA+TGG | - | 21149:7330-7349 | MS.gene071699:intergenic | 40.0% | |
| TTCTCATTCAAATCGCCAAG+TGG | - | 21149:7360-7379 | MS.gene071699:intergenic | 40.0% | |
| TTGCGACATGAAGGATTTCT+GGG | + | 21149:7216-7235 | MS.gene071699:CDS | 40.0% | |
| TTTAAGTCAGCTTGATAGGG+AGG | + | 21149:5433-5452 | MS.gene071699:intron | 40.0% | |
| TTTGCGACATGAAGGATTTC+TGG | + | 21149:7215-7234 | MS.gene071699:CDS | 40.0% | |
| ! | AAGCAATAGTGGAAGCTGAT+AGG | - | 21149:6608-6627 | MS.gene071699:intergenic | 40.0% |
| ! | ATGCTTGTTGGGGACATTTA+TGG | + | 21149:6398-6417 | MS.gene071699:CDS | 40.0% |
| ! | CATTTTGTGATGAAGGCTAC+TGG | + | 21149:5260-5279 | MS.gene071699:intron | 40.0% |
| ! | TTCCGGTGTTAGTATGATCA+AGG | + | 21149:6043-6062 | MS.gene071699:CDS | 40.0% |
| !! | AGCAAATGAAAGAGTGTCCA+TGG | - | 21149:7056-7075 | MS.gene071699:intergenic | 40.0% |
| !! | ATGTTGGTGGTGGTACTTAT+TGG | + | 21149:6207-6226 | MS.gene071699:CDS | 40.0% |
| !! | GTGTACTTTTCAAGACACGA+AGG | + | 21149:4492-4511 | MS.gene071699:CDS | 40.0% |
| !! | TGTTGGTGGTGGTACTTATT+GGG | + | 21149:6208-6227 | MS.gene071699:CDS | 40.0% |
| AGAGCTATCGACATGCTTGT+TGG | + | 21149:6386-6405 | MS.gene071699:CDS | 45.0% | |
| ATGTCGCAAAAACATCGCCT+GGG | - | 21149:7205-7224 | MS.gene071699:intergenic | 45.0% | |
| CAACTAACTGATGCACCATG+AGG | - | 21149:7287-7306 | MS.gene071699:intergenic | 45.0% | |
| CATTCAAATCGCCAAGTGGT+GGG | - | 21149:7356-7375 | MS.gene071699:intergenic | 45.0% | |
| CCATGAAGCTTTCACACACA+TGG | + | 21149:5953-5972 | MS.gene071699:CDS | 45.0% | |
| CCATGTGTGTGAAAGCTTCA+TGG | - | 21149:5956-5975 | MS.gene071699:intergenic | 45.0% | |
| CTCAAGCAACTCATCAAAGC+TGG | - | 21149:6345-6364 | MS.gene071699:intergenic | 45.0% | |
| CTTGTTGGGGACATTTATGG+TGG | + | 21149:6401-6420 | MS.gene071699:CDS | 45.0% | |
| GAAGCTTTCACACACATGGA+GGG | + | 21149:5957-5976 | MS.gene071699:CDS | 45.0% | |
| GAGCGATTAGGGCTTTCTAA+TGG | + | 21149:4552-4571 | MS.gene071699:CDS | 45.0% | |
| GAGCTATCGACATGCTTGTT+GGG | + | 21149:6387-6406 | MS.gene071699:CDS | 45.0% | |
| GCATCAAAGCAGAAGACAAG+TGG | - | 21149:5216-5235 | MS.gene071699:intergenic | 45.0% | |
| GCATGGTTTAGATGACCTCA+TGG | + | 21149:7269-7288 | MS.gene071699:CDS | 45.0% | |
| GCTTTCCTATTCTTGGTGGA+AGG | + | 21149:4586-4605 | MS.gene071699:CDS | 45.0% | |
| GTCACGTTACTCAGATACTG+AGG | + | 21149:4845-4864 | MS.gene071699:intron | 45.0% | |
| GTTAGTGGGACAAATGTTGG+TGG | + | 21149:6194-6213 | MS.gene071699:CDS | 45.0% | |
| TAGCAGACTATATCCCACCA+CGG | - | 21149:4683-4702 | MS.gene071699:intergenic | 45.0% | |
| TCATTCAAATCGCCAAGTGG+TGG | - | 21149:7357-7376 | MS.gene071699:intergenic | 45.0% | |
| TCTAGTTACAGCAAGCCCTT+AGG | - | 21149:7102-7121 | MS.gene071699:intergenic | 45.0% | |
| TGAAGCCTTCCACCAAGAAT+AGG | - | 21149:4594-4613 | MS.gene071699:intergenic | 45.0% | |
| TGAAGCTTTCACACACATGG+AGG | + | 21149:5956-5975 | MS.gene071699:CDS | 45.0% | |
| TGGGGACATTTATGGTGGTT+TGG | + | 21149:6406-6425 | MS.gene071699:CDS | 45.0% | |
| TTTGTGATGAAGGCTACTGG+AGG | + | 21149:5263-5282 | MS.gene071699:intron | 45.0% | |
| ! | AGCTATCGACATGCTTGTTG+GGG | + | 21149:6388-6407 | MS.gene071699:CDS | 45.0% |
| ! | AGGGTTAGTGGGACAAATGT+TGG | + | 21149:6191-6210 | MS.gene071699:CDS | 45.0% |
| ! | GAAGGATTTCTGGGAGCTTT+AGG | + | 21149:7225-7244 | MS.gene071699:CDS | 45.0% |
| ! | GGAAGTTTGAGAGGGTTAGT+GGG | + | 21149:6180-6199 | MS.gene071699:CDS | 45.0% |
| !! | GCGATGTTTTTGCGACATGA+AGG | + | 21149:7207-7226 | MS.gene071699:CDS | 45.0% |
| !! | GTTGGTGGTGGTACTTATTG+GGG | + | 21149:6209-6228 | MS.gene071699:CDS | 45.0% |
| !! | TGTCATAGGTTGATGGGGAT+GGG | + | 21149:6159-6178 | MS.gene071699:intron | 45.0% |
| !! | TTGTCATAGGTTGATGGGGA+TGG | + | 21149:6158-6177 | MS.gene071699:intron | 45.0% |
| AAGATACATGGCCCACCACT+TGG | + | 21149:7342-7361 | MS.gene071699:CDS | 50.0% | |
| ACAACATCGGTCAGGTGAGT+TGG | + | 21149:6718-6737 | MS.gene071699:intron | 50.0% | |
| ATGGGGATGGGAAGTTTGAG+AGG | + | 21149:6171-6190 | MS.gene071699:CDS | 50.0% | |
| ATGGGTGCTCCATATACTGG+TGG | + | 21149:7318-7337 | MS.gene071699:CDS | 50.0% | |
| CAGGGGTCATGCTTATACCA+TGG | + | 21149:7036-7055 | MS.gene071699:CDS | 50.0% | |
| CATGTCGCAAAAACATCGCC+TGG | - | 21149:7206-7225 | MS.gene071699:intergenic | 50.0% | |
| CATTCAAAGCAGCTTCACCG+TGG | + | 21149:4663-4682 | MS.gene071699:intron | 50.0% | |
| GGGAAGTTTGAGAGGGTTAG+TGG | + | 21149:6179-6198 | MS.gene071699:CDS | 50.0% | |
| GGTGGTACTTATTGGGGACT+GGG | + | 21149:6215-6234 | MS.gene071699:CDS | 50.0% | |
| TGGGGATGGGAAGTTTGAGA+GGG | + | 21149:6172-6191 | MS.gene071699:CDS | 50.0% | |
| TGGTGGTACTTATTGGGGAC+TGG | + | 21149:6214-6233 | MS.gene071699:CDS | 50.0% | |
| TTGCTTGAGCTGAGCCAGAA+AGG | + | 21149:6356-6375 | MS.gene071699:CDS | 50.0% | |
| ! | AGTGGGACAAATGTTGGTGG+TGG | + | 21149:6197-6216 | MS.gene071699:CDS | 50.0% |
| ! | CCAGTATATGGAGCACCCAT+CGG | - | 21149:7318-7337 | MS.gene071699:intergenic | 50.0% |
| CAAAGCAGCTTCACCGTGGT+GGG | + | 21149:4667-4686 | MS.gene071699:intron | 55.0% | |
| CCGATGGGTGCTCCATATAC+TGG | + | 21149:7315-7334 | MS.gene071699:CDS | 55.0% | |
| GTGATGAAGGCTACTGGAGG+TGG | + | 21149:5266-5285 | MS.gene071699:intron | 55.0% | |
| TAGGTCCAATGGAGAAGCCC+AGG | + | 21149:7185-7204 | MS.gene071699:intron | 55.0% | |
| TCAAAGCAGCTTCACCGTGG+TGG | + | 21149:4666-4685 | MS.gene071699:intron | 55.0% | |
| CATCGCCTGGGCTTCTCCAT+TGG | - | 21149:7193-7212 | MS.gene071699:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 21149 | gene | 4475 | 7479 | 4475 | ID=MS.gene071699 |
| 21149 | mRNA | 4475 | 7479 | 4475 | ID=MS.gene071699.t1;Parent=MS.gene071699 |
| 21149 | exon | 4475 | 4681 | 4475 | ID=MS.gene071699.t1.exon1;Parent=MS.gene071699.t1 |
| 21149 | CDS | 4475 | 4681 | 4475 | ID=cds.MS.gene071699.t1;Parent=MS.gene071699.t1 |
| 21149 | exon | 5052 | 5105 | 5052 | ID=MS.gene071699.t1.exon2;Parent=MS.gene071699.t1 |
| 21149 | CDS | 5052 | 5105 | 5052 | ID=cds.MS.gene071699.t1;Parent=MS.gene071699.t1 |
| 21149 | exon | 5285 | 5391 | 5285 | ID=MS.gene071699.t1.exon3;Parent=MS.gene071699.t1 |
| 21149 | CDS | 5285 | 5391 | 5285 | ID=cds.MS.gene071699.t1;Parent=MS.gene071699.t1 |
| 21149 | exon | 5945 | 6064 | 5945 | ID=MS.gene071699.t1.exon4;Parent=MS.gene071699.t1 |
| 21149 | CDS | 5945 | 6064 | 5945 | ID=cds.MS.gene071699.t1;Parent=MS.gene071699.t1 |
| 21149 | exon | 6167 | 6261 | 6167 | ID=MS.gene071699.t1.exon5;Parent=MS.gene071699.t1 |
| 21149 | CDS | 6167 | 6261 | 6167 | ID=cds.MS.gene071699.t1;Parent=MS.gene071699.t1 |
| 21149 | exon | 6346 | 6439 | 6346 | ID=MS.gene071699.t1.exon6;Parent=MS.gene071699.t1 |
| 21149 | CDS | 6346 | 6439 | 6346 | ID=cds.MS.gene071699.t1;Parent=MS.gene071699.t1 |
| 21149 | exon | 6600 | 6731 | 6600 | ID=MS.gene071699.t1.exon7;Parent=MS.gene071699.t1 |
| 21149 | CDS | 6600 | 6731 | 6600 | ID=cds.MS.gene071699.t1;Parent=MS.gene071699.t1 |
| 21149 | exon | 6974 | 7086 | 6974 | ID=MS.gene071699.t1.exon8;Parent=MS.gene071699.t1 |
| 21149 | CDS | 6974 | 7086 | 6974 | ID=cds.MS.gene071699.t1;Parent=MS.gene071699.t1 |
| 21149 | exon | 7188 | 7479 | 7188 | ID=MS.gene071699.t1.exon9;Parent=MS.gene071699.t1 |
| 21149 | CDS | 7188 | 7479 | 7188 | ID=cds.MS.gene071699.t1;Parent=MS.gene071699.t1 |
| Gene Sequence |
| Protein sequence |
