Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09022.t1 | KRH42679.1 | 89.2 | 65 | 7 | 0 | 1 | 65 | 1 | 65 | 3.40E-25 | 123.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09022.t1 | I1KS28 | 89.2 | 65 | 7 | 0 | 1 | 65 | 1 | 65 | 2.5e-25 | 123.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene09022 | -0.834939 | 2.24E-56 | -1.69E-46 |
| MS.gene049232 | MS.gene09022 | -0.835883 | 1.29E-56 | -1.69E-46 |
| MS.gene049633 | MS.gene09022 | -0.804132 | 2.50E-49 | -1.69E-46 |
| MS.gene049656 | MS.gene09022 | -0.817942 | 2.54E-52 | -1.69E-46 |
| MS.gene049657 | MS.gene09022 | -0.841102 | 5.83E-58 | -1.69E-46 |
| MS.gene049865 | MS.gene09022 | -0.806673 | 7.34E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene09022 | -0.80937 | 1.96E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene09022 | -0.852856 | 3.51E-61 | -1.69E-46 |
| MS.gene050323 | MS.gene09022 | -0.831224 | 1.88E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene09022 | -0.817149 | 3.83E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene09022 | -0.811118 | 8.21E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene09022 | -0.810075 | 1.38E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene09022 | -0.861207 | 1.21E-63 | -1.69E-46 |
| MS.gene050871 | MS.gene09022 | -0.862946 | 3.53E-64 | -1.69E-46 |
| MS.gene050904 | MS.gene09022 | -0.854047 | 1.60E-61 | -1.69E-46 |
| MS.gene050950 | MS.gene09022 | -0.806731 | 7.13E-50 | -1.69E-46 |
| MS.gene051268 | MS.gene09022 | -0.807073 | 6.04E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene09022 | -0.803651 | 3.15E-49 | -1.69E-46 |
| MS.gene051941 | MS.gene09022 | -0.806706 | 7.22E-50 | -1.69E-46 |
| MS.gene052066 | MS.gene09022 | -0.815932 | 7.18E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene09022 | -0.831701 | 1.44E-55 | -1.69E-46 |
| MS.gene052482 | MS.gene09022 | -0.847022 | 1.50E-59 | -1.69E-46 |
| MS.gene052486 | MS.gene09022 | -0.865373 | 6.19E-65 | -1.69E-46 |
| MS.gene052503 | MS.gene09022 | -0.807237 | 5.58E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene09022 | -0.815613 | 8.45E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene09022 | -0.816689 | 4.86E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene09022 | -0.838858 | 2.24E-57 | -1.69E-46 |
| MS.gene053203 | MS.gene09022 | -0.830807 | 2.39E-55 | -1.69E-46 |
| MS.gene053421 | MS.gene09022 | 0.845545 | 3.80E-59 | -1.69E-46 |
| MS.gene053480 | MS.gene09022 | -0.832492 | 9.16E-56 | -1.69E-46 |
| MS.gene053626 | MS.gene09022 | -0.825794 | 3.86E-54 | -1.69E-46 |
| MS.gene053633 | MS.gene09022 | -0.862601 | 4.52E-64 | -1.69E-46 |
| MS.gene053824 | MS.gene09022 | -0.815983 | 6.99E-52 | -1.69E-46 |
| MS.gene054003 | MS.gene09022 | -0.827162 | 1.82E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene09022 | -0.83702 | 6.65E-57 | -1.69E-46 |
| MS.gene05470 | MS.gene09022 | -0.808757 | 2.65E-50 | -1.69E-46 |
| MS.gene055202 | MS.gene09022 | 0.806958 | 6.39E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene09022 | -0.805461 | 1.32E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene09022 | -0.807752 | 4.33E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene09022 | -0.807211 | 5.65E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene09022 | -0.846336 | 2.31E-59 | -1.69E-46 |
| MS.gene056040 | MS.gene09022 | -0.827174 | 1.81E-54 | -1.69E-46 |
| MS.gene056166 | MS.gene09022 | -0.851358 | 9.35E-61 | -1.69E-46 |
| MS.gene056387 | MS.gene09022 | -0.848097 | 7.61E-60 | -1.69E-46 |
| MS.gene056450 | MS.gene09022 | -0.811826 | 5.77E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene09022 | -0.846875 | 1.65E-59 | -1.69E-46 |
| MS.gene056510 | MS.gene09022 | -0.827912 | 1.20E-54 | -1.69E-46 |
| MS.gene056583 | MS.gene09022 | 0.800458 | 1.43E-48 | -1.69E-46 |
| MS.gene056618 | MS.gene09022 | 0.808144 | 3.58E-50 | -1.69E-46 |
| MS.gene056647 | MS.gene09022 | 0.82591 | 3.62E-54 | -1.69E-46 |
| MS.gene056878 | MS.gene09022 | -0.821439 | 4.04E-53 | -1.69E-46 |
| MS.gene057173 | MS.gene09022 | 0.834068 | 3.71E-56 | -1.69E-46 |
| MS.gene057831 | MS.gene09022 | -0.812204 | 4.77E-51 | -1.69E-46 |
| MS.gene057872 | MS.gene09022 | -0.800653 | 1.30E-48 | -1.69E-46 |
| MS.gene05787 | MS.gene09022 | -0.843878 | 1.07E-58 | -1.69E-46 |
| MS.gene058041 | MS.gene09022 | -0.808564 | 2.91E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene09022 | -0.864819 | 9.24E-65 | -1.69E-46 |
| MS.gene058170 | MS.gene09022 | 0.832612 | 8.56E-56 | -1.69E-46 |
| MS.gene058171 | MS.gene09022 | 0.838923 | 2.15E-57 | -1.69E-46 |
| MS.gene058172 | MS.gene09022 | 0.810911 | 9.11E-51 | -1.69E-46 |
| MS.gene058173 | MS.gene09022 | 0.840348 | 9.18E-58 | -1.69E-46 |
| MS.gene058174 | MS.gene09022 | 0.823529 | 1.32E-53 | -1.69E-46 |
| MS.gene058175 | MS.gene09022 | 0.838986 | 2.08E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene09022 | -0.839557 | 1.48E-57 | -1.69E-46 |
| MS.gene058420 | MS.gene09022 | -0.812546 | 4.02E-51 | -1.69E-46 |
| MS.gene059023 | MS.gene09022 | -0.808625 | 2.82E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene09022 | -0.807452 | 5.02E-50 | -1.69E-46 |
| MS.gene059801 | MS.gene09022 | -0.80059 | 1.34E-48 | -1.69E-46 |
| MS.gene059865 | MS.gene09022 | -0.808195 | 3.49E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene09022 | -0.863927 | 1.75E-64 | -1.69E-46 |
| MS.gene05996 | MS.gene09022 | -0.851738 | 7.30E-61 | -1.69E-46 |
| MS.gene06000 | MS.gene09022 | -0.853384 | 2.48E-61 | -1.69E-46 |
| MS.gene060187 | MS.gene09022 | 0.880605 | 4.78E-70 | -1.69E-46 |
| MS.gene060295 | MS.gene09022 | -0.819614 | 1.06E-52 | -1.69E-46 |
| MS.gene060339 | MS.gene09022 | -0.863749 | 1.99E-64 | -1.69E-46 |
| MS.gene060595 | MS.gene09022 | 0.86097 | 1.42E-63 | -1.69E-46 |
| MS.gene060762 | MS.gene09022 | -0.814529 | 1.47E-51 | -1.69E-46 |
| MS.gene060778 | MS.gene09022 | -0.849325 | 3.48E-60 | -1.69E-46 |
| MS.gene06077 | MS.gene09022 | -0.850734 | 1.40E-60 | -1.69E-46 |
| MS.gene060982 | MS.gene09022 | -0.828177 | 1.04E-54 | -1.69E-46 |
| MS.gene061226 | MS.gene09022 | 0.807482 | 4.95E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09022.t1 | MTR_8g080750 | 90.698 | 43 | 4 | 0 | 1 | 43 | 181 | 223 | 5.76e-20 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09022.t1 | AT1G27330 | 84.906 | 53 | 8 | 0 | 1 | 53 | 1 | 53 | 3.23e-27 | 93.6 |
| MS.gene09022.t1 | AT1G27350 | 84.906 | 53 | 8 | 0 | 1 | 53 | 1 | 53 | 3.23e-27 | 93.6 |
Find 16 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTCTTAACAGTTGTTTC+TGG | 0.223249 | 4.4:-15330259 | None:intergenic |
| TTCTTCGTCTTTGTTGTCAT+TGG | 0.272950 | 4.4:+15330316 | MS.gene09022:CDS |
| ACGAAGAAACCAAGCAAAAC+GGG | 0.342450 | 4.4:-15330301 | None:intergenic |
| CAGCTCTCTTTCAGATAATC+AGG | 0.365308 | 4.4:+15331264 | MS.gene09022:intron |
| CCAAGCAAAACGGGGCCAAC+AGG | 0.391773 | 4.4:-15330292 | None:intergenic |
| GACGAAGAAACCAAGCAAAA+CGG | 0.413008 | 4.4:-15330302 | None:intergenic |
| CATCAAAGCGCCTTGCAGTT+AGG | 0.424154 | 4.4:+15330191 | MS.gene09022:CDS |
| CGAGTGGAGGCATGGCATAA+TGG | 0.448620 | 4.4:+15331294 | MS.gene09022:CDS |
| CCAGAAACAACTGTTAAGAA+AGG | 0.524644 | 4.4:+15330259 | MS.gene09022:CDS |
| AAAGGAAATGACTATCCTGT+TGG | 0.571369 | 4.4:+15330277 | MS.gene09022:CDS |
| GACAGCAACGAGTGGAGGCA+TGG | 0.571659 | 4.4:+15331286 | MS.gene09022:CDS |
| AAAGCGCCTTGCAGTTAGGA+AGG | 0.575086 | 4.4:+15330195 | MS.gene09022:CDS |
| ATCAGGACAGCAACGAGTGG+AGG | 0.608196 | 4.4:+15331281 | MS.gene09022:CDS |
| CGAAGAAACCAAGCAAAACG+GGG | 0.617394 | 4.4:-15330300 | None:intergenic |
| TCTCAACCTTCCTAACTGCA+AGG | 0.647474 | 4.4:-15330201 | None:intergenic |
| ATAATCAGGACAGCAACGAG+TGG | 0.658965 | 4.4:+15331278 | MS.gene09022:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAATAAAAAAAAATTACA+GGG | - | chr4.4:15330713-15330732 | None:intergenic | 10.0% |
| !! | TAAATAAAAAAAAATTACAG+GGG | - | chr4.4:15330712-15330731 | None:intergenic | 10.0% |
| !! | AAAAATTAGTAAAACACATA+AGG | - | chr4.4:15330374-15330393 | None:intergenic | 15.0% |
| !! | AAAAATTTACTATATTACAG+AGG | - | chr4.4:15330670-15330689 | None:intergenic | 15.0% |
| !! | AAAATTTACTATATTACAGA+GGG | - | chr4.4:15330669-15330688 | None:intergenic | 15.0% |
| !! | AAATAAAAAAAAATTACAGG+GGG | - | chr4.4:15330711-15330730 | None:intergenic | 15.0% |
| !! | ATCAGAAATTTATCAAAATT+AGG | + | chr4.4:15329980-15329999 | MS.gene09022:intron | 15.0% |
| !! | CAATATTTCAAAAATTGAAT+CGG | - | chr4.4:15330624-15330643 | None:intergenic | 15.0% |
| !! | GGTAAATAAAAAAAAATTAC+AGG | - | chr4.4:15330714-15330733 | None:intergenic | 15.0% |
| !! | TCAATTTCAAAACAAAAATT+CGG | - | chr4.4:15329917-15329936 | None:intergenic | 15.0% |
| !!! | AAGAAATTTTTGTTTTTGTT+TGG | - | chr4.4:15330776-15330795 | None:intergenic | 15.0% |
| !!! | AATTTTTGAAATATTGTTGT+GGG | + | chr4.4:15330628-15330647 | MS.gene09022:intron | 15.0% |
| !!! | ATAATTTTCAATTCAATTCA+AGG | - | chr4.4:15330927-15330946 | None:intergenic | 15.0% |
| !!! | TATATTAATGTGTTTGAAAT+TGG | - | chr4.4:15330844-15330863 | None:intergenic | 15.0% |
| !!! | TGTTAAATTTTGATTGAATT+TGG | + | chr4.4:15330102-15330121 | MS.gene09022:intron | 15.0% |
| !! | AAAACAAAAAATTTGTACAG+GGG | - | chr4.4:15330735-15330754 | None:intergenic | 20.0% |
| !! | CAAAACAAAAAATTTGTACA+GGG | - | chr4.4:15330736-15330755 | None:intergenic | 20.0% |
| !! | TATTGTTTGTGTGATTTATT+TGG | + | chr4.4:15330443-15330462 | MS.gene09022:intron | 20.0% |
| !! | TCAAAACAAAAAATTTGTAC+AGG | - | chr4.4:15330737-15330756 | None:intergenic | 20.0% |
| !!! | ATTTTTGAAATATTGTTGTG+GGG | + | chr4.4:15330629-15330648 | MS.gene09022:intron | 20.0% |
| !!! | CAATTTTTGAAATATTGTTG+TGG | + | chr4.4:15330627-15330646 | MS.gene09022:intron | 20.0% |
| ! | AATTAGTAAAACACATAAGG+AGG | - | chr4.4:15330371-15330390 | None:intergenic | 25.0% |
| ! | CTGAGTACATAATTTATTCT+CGG | + | chr4.4:15330900-15330919 | MS.gene09022:intron | 25.0% |
| ! | GAGAAAAATATCACAAAAAG+AGG | + | chr4.4:15330229-15330248 | MS.gene09022:CDS | 25.0% |
| ! | GTATATCAAACATTTGATCA+CGG | - | chr4.4:15331110-15331129 | None:intergenic | 25.0% |
| ! | TGAGTACATAATTTATTCTC+GGG | + | chr4.4:15330901-15330920 | MS.gene09022:intron | 25.0% |
| ! | TGTTGAATGAAATTGAGATT+TGG | + | chr4.4:15330133-15330152 | MS.gene09022:intron | 25.0% |
| !! | GTCAAATTTTATGTAGCTTA+TGG | + | chr4.4:15330002-15330021 | MS.gene09022:intron | 25.0% |
| !!! | GAAATTGAGATTTGGAATTT+TGG | + | chr4.4:15330141-15330160 | MS.gene09022:intron | 25.0% |
| !!! | TTACATTGATTTTCAGCTTA+TGG | + | chr4.4:15330036-15330055 | MS.gene09022:intron | 25.0% |
| AATTAACAATAGTTCAGCTC+TGG | - | chr4.4:15330524-15330543 | None:intergenic | 30.0% | |
| ACTGAACCGATAGTTAAAAT+CGG | + | chr4.4:15330493-15330512 | MS.gene09022:intron | 30.0% | |
| ATGTTTGATATACCTTCTCA+AGG | + | chr4.4:15331117-15331136 | MS.gene09022:intron | 30.0% | |
| CCTAATTCTTGTGATGAATT+GGG | + | chr4.4:15330414-15330433 | MS.gene09022:intron | 30.0% | |
| CGAGAATAAATTATGTACTC+AGG | - | chr4.4:15330902-15330921 | None:intergenic | 30.0% | |
| GAGCTGAACTATTGTTAATT+CGG | + | chr4.4:15330524-15330543 | MS.gene09022:intron | 30.0% | |
| GTAGAATCATGACAAAAACA+AGG | - | chr4.4:15329873-15329892 | None:intergenic | 30.0% | |
| TCCTAATTCTTGTGATGAAT+TGG | + | chr4.4:15330413-15330432 | MS.gene09022:intron | 30.0% | |
| TGTTAATTCGGATATTTGAG+AGG | + | chr4.4:15330536-15330555 | MS.gene09022:intron | 30.0% | |
| TTAACAATTCCCTATGGAAT+TGG | + | chr4.4:15331080-15331099 | MS.gene09022:intron | 30.0% | |
| !! | ATTGAGATTTGGAATTTTGG+TGG | + | chr4.4:15330144-15330163 | MS.gene09022:intron | 30.0% |
| !! | TGTTTTTGTTTGGCCTATTA+GGG | - | chr4.4:15330766-15330785 | None:intergenic | 30.0% |
| !!! | TTGTTTTTGTTTGGCCTATT+AGG | - | chr4.4:15330767-15330786 | None:intergenic | 30.0% |
| AAAGGAAATGACTATCCTGT+TGG | + | chr4.4:15330277-15330296 | MS.gene09022:CDS | 35.0% | |
| AATCGTATTATAGTGCAGAG+AGG | + | chr4.4:15331027-15331046 | MS.gene09022:intron | 35.0% | |
| AGGGATTTAACAATTCCCTA+TGG | + | chr4.4:15331074-15331093 | MS.gene09022:intron | 35.0% | |
| ATAAGGAGGACAACATTGAA+AGG | - | chr4.4:15330357-15330376 | None:intergenic | 35.0% | |
| ATCGTATTATAGTGCAGAGA+GGG | + | chr4.4:15331028-15331047 | MS.gene09022:intron | 35.0% | |
| ATGAACATGCTATGGAAGAA+AGG | - | chr4.4:15331161-15331180 | None:intergenic | 35.0% | |
| CCAGAAACAACTGTTAAGAA+AGG | + | chr4.4:15330259-15330278 | MS.gene09022:CDS | 35.0% | |
| CCCAATTCATCACAAGAATT+AGG | - | chr4.4:15330417-15330436 | None:intergenic | 35.0% | |
| GAATGCAAGAAATAGAAGAG+AGG | - | chr4.4:15329801-15329820 | None:intergenic | 35.0% | |
| GATATACCTTCTCAAGGATT+AGG | + | chr4.4:15331123-15331142 | MS.gene09022:intron | 35.0% | |
| TAAGGAGGACAACATTGAAA+GGG | - | chr4.4:15330356-15330375 | None:intergenic | 35.0% | |
| TATCATCCTAATCCTTGAGA+AGG | - | chr4.4:15331132-15331151 | None:intergenic | 35.0% | |
| TCAAGCTGTTGAACTATTTG+AGG | + | chr4.4:15330581-15330600 | MS.gene09022:intron | 35.0% | |
| ! | CCTTTCTTAACAGTTGTTTC+TGG | - | chr4.4:15330262-15330281 | None:intergenic | 35.0% |
| ! | TTCTTCGTCTTTGTTGTCAT+TGG | + | chr4.4:15330316-15330335 | MS.gene09022:CDS | 35.0% |
| ! | TTGAACTATTTGAGGTCTTG+TGG | + | chr4.4:15330589-15330608 | MS.gene09022:intron | 35.0% |
| !! | GGTTCAATCGTTGTTTTGTT+TGG | + | chr4.4:15330557-15330576 | MS.gene09022:intron | 35.0% |
| !! | GTTTTTGTTTGGCCTATTAG+GGG | - | chr4.4:15330765-15330784 | None:intergenic | 35.0% |
| !! | TTTTTGTTTGGCCTATTAGG+GGG | - | chr4.4:15330764-15330783 | None:intergenic | 35.0% |
| !!! | GCTCAACCGATTTTAACTAT+CGG | - | chr4.4:15330502-15330521 | None:intergenic | 35.0% |
| !!! | GTTTTGATTTACCCCCTAAT+AGG | + | chr4.4:15330750-15330769 | MS.gene09022:intron | 35.0% |
| ACGAAGAAACCAAGCAAAAC+GGG | - | chr4.4:15330304-15330323 | None:intergenic | 40.0% | |
| ATTATAGTGCAGAGAGGGAA+AGG | + | chr4.4:15331033-15331052 | MS.gene09022:intron | 40.0% | |
| CAGCTCTCTTTCAGATAATC+AGG | + | chr4.4:15331264-15331283 | MS.gene09022:intron | 40.0% | |
| CATAGCTCATGAACATGCTA+TGG | - | chr4.4:15331169-15331188 | None:intergenic | 40.0% | |
| GACGAAGAAACCAAGCAAAA+CGG | - | chr4.4:15330305-15330324 | None:intergenic | 40.0% | |
| TTATAGTGCAGAGAGGGAAA+GGG | + | chr4.4:15331034-15331053 | MS.gene09022:intron | 40.0% | |
| !! | GGTAATGGGTAATGGTCAAA+GGG | + | chr4.4:15331055-15331074 | MS.gene09022:intron | 40.0% |
| ATAATCAGGACAGCAACGAG+TGG | + | chr4.4:15331278-15331297 | MS.gene09022:CDS | 45.0% | |
| CGAAGAAACCAAGCAAAACG+GGG | - | chr4.4:15330303-15330322 | None:intergenic | 45.0% | |
| TCTCAACCTTCCTAACTGCA+AGG | - | chr4.4:15330204-15330223 | None:intergenic | 45.0% | |
| !! | AGGGAAAGGGTAATGGGTAA+TGG | + | chr4.4:15331047-15331066 | MS.gene09022:intron | 45.0% |
| !! | GGGTAATGGGTAATGGTCAA+AGG | + | chr4.4:15331054-15331073 | MS.gene09022:intron | 45.0% |
| !!! | TAAATTTTTGAAATATTTTA+TGG | + | chr4.4:15330681-15330700 | MS.gene09022:intron | 5.0% |
| GCAGAGAGGGAAAGGGTAAT+GGG | + | chr4.4:15331041-15331060 | MS.gene09022:intron | 50.0% | |
| TGCAGAGAGGGAAAGGGTAA+TGG | + | chr4.4:15331040-15331059 | MS.gene09022:intron | 50.0% | |
| ! | AAAGCGCCTTGCAGTTAGGA+AGG | + | chr4.4:15330195-15330214 | MS.gene09022:CDS | 50.0% |
| ! | CACGGAGCACCAATTCCATA+GGG | - | chr4.4:15331092-15331111 | None:intergenic | 50.0% |
| ! | CATCAAAGCGCCTTGCAGTT+AGG | + | chr4.4:15330191-15330210 | MS.gene09022:CDS | 50.0% |
| ! | TCACGGAGCACCAATTCCAT+AGG | - | chr4.4:15331093-15331112 | None:intergenic | 50.0% |
| ATCAGGACAGCAACGAGTGG+AGG | + | chr4.4:15331281-15331300 | MS.gene09022:CDS | 55.0% | |
| ! | CGAGTGGAGGCATGGCATAA+TGG | + | chr4.4:15331294-15331313 | MS.gene09022:CDS | 55.0% |
| CCAAGCAAAACGGGGCCAAC+AGG | - | chr4.4:15330295-15330314 | None:intergenic | 60.0% | |
| GACAGCAACGAGTGGAGGCA+TGG | + | chr4.4:15331286-15331305 | MS.gene09022:CDS | 60.0% | |
| ! | CCTGTTGGCCCCGTTTTGCT+TGG | + | chr4.4:15330292-15330311 | MS.gene09022:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 15329782 | 15331324 | 15329782 | ID=MS.gene09022 |
| chr4.4 | mRNA | 15329782 | 15331324 | 15329782 | ID=MS.gene09022.t1;Parent=MS.gene09022 |
| chr4.4 | exon | 15329782 | 15329784 | 15329782 | ID=MS.gene09022.t1.exon1;Parent=MS.gene09022.t1 |
| chr4.4 | CDS | 15329782 | 15329784 | 15329782 | ID=cds.MS.gene09022.t1;Parent=MS.gene09022.t1 |
| chr4.4 | exon | 15330187 | 15330343 | 15330187 | ID=MS.gene09022.t1.exon2;Parent=MS.gene09022.t1 |
| chr4.4 | CDS | 15330187 | 15330343 | 15330187 | ID=cds.MS.gene09022.t1;Parent=MS.gene09022.t1 |
| chr4.4 | exon | 15331278 | 15331324 | 15331278 | ID=MS.gene09022.t1.exon3;Parent=MS.gene09022.t1 |
| chr4.4 | CDS | 15331278 | 15331324 | 15331278 | ID=cds.MS.gene09022.t1;Parent=MS.gene09022.t1 |
| Gene Sequence |
| Protein sequence |
