Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073640.t1 | XP_003590247.2 | 98.9 | 175 | 2 | 0 | 130 | 304 | 30 | 204 | 1.50E-88 | 336.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073640.t1 | G7I7C8 | 98.9 | 175 | 2 | 0 | 130 | 304 | 30 | 204 | 1.1e-88 | 336.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene073640 | 0.870102 | 1.88E-66 | -1.69E-46 |
| MS.gene049217 | MS.gene073640 | 0.838181 | 3.35E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene073640 | 0.876306 | 1.55E-68 | -1.69E-46 |
| MS.gene049232 | MS.gene073640 | 0.88227 | 1.20E-70 | -1.69E-46 |
| MS.gene049285 | MS.gene073640 | 0.885756 | 6.18E-72 | -1.69E-46 |
| MS.gene049320 | MS.gene073640 | 0.866556 | 2.61E-65 | -1.69E-46 |
| MS.gene049600 | MS.gene073640 | 0.801846 | 7.43E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene073640 | 0.817592 | 3.04E-52 | -1.69E-46 |
| MS.gene049627 | MS.gene073640 | 0.883937 | 2.94E-71 | -1.69E-46 |
| MS.gene049633 | MS.gene073640 | 0.821905 | 3.15E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene073640 | 0.829564 | 4.80E-55 | -1.69E-46 |
| MS.gene049865 | MS.gene073640 | 0.846567 | 2.00E-59 | -1.69E-46 |
| MS.gene05010 | MS.gene073640 | 0.883473 | 4.36E-71 | -1.69E-46 |
| MS.gene050163 | MS.gene073640 | 0.865577 | 5.34E-65 | -1.69E-46 |
| MS.gene050165 | MS.gene073640 | 0.865663 | 5.02E-65 | -1.69E-46 |
| MS.gene050170 | MS.gene073640 | 0.868136 | 8.17E-66 | -1.69E-46 |
| MS.gene050216 | MS.gene073640 | 0.814791 | 1.29E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene073640 | 0.850085 | 2.13E-60 | -1.69E-46 |
| MS.gene050333 | MS.gene073640 | 0.841466 | 4.67E-58 | -1.69E-46 |
| MS.gene050381 | MS.gene073640 | -0.807126 | 5.89E-50 | -1.69E-46 |
| MS.gene050496 | MS.gene073640 | 0.87251 | 3.01E-67 | -1.69E-46 |
| MS.gene050504 | MS.gene073640 | 0.902754 | 7.01E-79 | -1.69E-46 |
| MS.gene050518 | MS.gene073640 | 0.869816 | 2.33E-66 | -1.69E-46 |
| MS.gene050577 | MS.gene073640 | 0.887056 | 2.00E-72 | -1.69E-46 |
| MS.gene050612 | MS.gene073640 | 0.861728 | 8.37E-64 | -1.69E-46 |
| MS.gene050675 | MS.gene073640 | 0.850375 | 1.77E-60 | -1.69E-46 |
| MS.gene050699 | MS.gene073640 | 0.858656 | 7.09E-63 | -1.69E-46 |
| MS.gene050747 | MS.gene073640 | 0.838817 | 2.30E-57 | -1.69E-46 |
| MS.gene050772 | MS.gene073640 | 0.842813 | 2.06E-58 | -1.69E-46 |
| MS.gene05080 | MS.gene073640 | 0.811992 | 5.30E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene073640 | 0.863397 | 2.56E-64 | -1.69E-46 |
| MS.gene050871 | MS.gene073640 | 0.864273 | 1.37E-64 | -1.69E-46 |
| MS.gene050876 | MS.gene073640 | 0.881944 | 1.58E-70 | -1.69E-46 |
| MS.gene05087 | MS.gene073640 | 0.859149 | 5.05E-63 | -1.69E-46 |
| MS.gene050883 | MS.gene073640 | -0.808525 | 2.97E-50 | -1.69E-46 |
| MS.gene050904 | MS.gene073640 | 0.898788 | 3.77E-77 | -1.69E-46 |
| MS.gene050950 | MS.gene073640 | 0.831928 | 1.26E-55 | -1.69E-46 |
| MS.gene050986 | MS.gene073640 | 0.883246 | 5.28E-71 | -1.69E-46 |
| MS.gene05100 | MS.gene073640 | 0.836208 | 1.07E-56 | -1.69E-46 |
| MS.gene051268 | MS.gene073640 | 0.837691 | 4.48E-57 | -1.69E-46 |
| MS.gene051317 | MS.gene073640 | 0.830385 | 3.03E-55 | -1.69E-46 |
| MS.gene051509 | MS.gene073640 | 0.80293 | 4.44E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene073640 | 0.859648 | 3.58E-63 | -1.69E-46 |
| MS.gene051560 | MS.gene073640 | 0.817885 | 2.61E-52 | -1.69E-46 |
| MS.gene051564 | MS.gene073640 | 0.820472 | 6.74E-53 | -1.69E-46 |
| MS.gene051694 | MS.gene073640 | 0.831423 | 1.68E-55 | -1.69E-46 |
| MS.gene051810 | MS.gene073640 | 0.803891 | 2.81E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene073640 | 0.801618 | 8.27E-49 | -1.69E-46 |
| MS.gene051946 | MS.gene073640 | -0.818092 | 2.35E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene073640 | 0.884975 | 1.21E-71 | -1.69E-46 |
| MS.gene052482 | MS.gene073640 | 0.912047 | 3.05E-83 | -1.69E-46 |
| MS.gene052486 | MS.gene073640 | 0.920701 | 9.17E-88 | -1.69E-46 |
| MS.gene052503 | MS.gene073640 | 0.842244 | 2.91E-58 | -1.69E-46 |
| MS.gene052670 | MS.gene073640 | 0.809981 | 1.45E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene073640 | 0.845295 | 4.44E-59 | -1.69E-46 |
| MS.gene052825 | MS.gene073640 | 0.839875 | 1.22E-57 | -1.69E-46 |
| MS.gene052966 | MS.gene073640 | 0.857482 | 1.58E-62 | -1.69E-46 |
| MS.gene053083 | MS.gene073640 | -0.847925 | 8.50E-60 | -1.69E-46 |
| MS.gene053203 | MS.gene073640 | 0.862014 | 6.84E-64 | -1.69E-46 |
| MS.gene053213 | MS.gene073640 | 0.859577 | 3.76E-63 | -1.69E-46 |
| MS.gene053286 | MS.gene073640 | 0.864608 | 1.08E-64 | -1.69E-46 |
| MS.gene053420 | MS.gene073640 | -0.833949 | 3.97E-56 | -1.69E-46 |
| MS.gene053436 | MS.gene073640 | 0.834055 | 3.74E-56 | -1.69E-46 |
| MS.gene053479 | MS.gene073640 | 0.806622 | 7.52E-50 | -1.69E-46 |
| MS.gene053480 | MS.gene073640 | 0.838744 | 2.40E-57 | -1.69E-46 |
| MS.gene053549 | MS.gene073640 | -0.848935 | 4.46E-60 | -1.69E-46 |
| MS.gene053574 | MS.gene073640 | 0.854775 | 9.83E-62 | -1.69E-46 |
| MS.gene053626 | MS.gene073640 | 0.842704 | 2.20E-58 | -1.69E-46 |
| MS.gene053632 | MS.gene073640 | 0.808673 | 2.76E-50 | -1.69E-46 |
| MS.gene053633 | MS.gene073640 | 0.830006 | 3.74E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene073640 | 0.855304 | 6.90E-62 | -1.69E-46 |
| MS.gene054003 | MS.gene073640 | 0.806726 | 7.15E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene073640 | 0.825663 | 4.14E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene073640 | 0.849367 | 3.38E-60 | -1.69E-46 |
| MS.gene054600 | MS.gene073640 | 0.850121 | 2.08E-60 | -1.69E-46 |
| MS.gene054616 | MS.gene073640 | -0.812124 | 4.96E-51 | -1.69E-46 |
| MS.gene054638 | MS.gene073640 | 0.80541 | 1.35E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene073640 | 0.841397 | 4.87E-58 | -1.69E-46 |
| MS.gene05470 | MS.gene073640 | 0.882585 | 9.21E-71 | -1.69E-46 |
| MS.gene054927 | MS.gene073640 | 0.818281 | 2.13E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene073640 | 0.892816 | 1.12E-74 | -1.69E-46 |
| MS.gene055362 | MS.gene073640 | 0.888479 | 5.69E-73 | -1.69E-46 |
| MS.gene055502 | MS.gene073640 | 0.870953 | 9.88E-67 | -1.69E-46 |
| MS.gene055577 | MS.gene073640 | 0.875717 | 2.47E-68 | -1.69E-46 |
| MS.gene055634 | MS.gene073640 | 0.806018 | 1.01E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene073640 | 0.807211 | 5.65E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene073640 | 0.840528 | 8.24E-58 | -1.69E-46 |
| MS.gene055750 | MS.gene073640 | 0.862513 | 4.81E-64 | -1.69E-46 |
| MS.gene055751 | MS.gene073640 | 0.855577 | 5.75E-62 | -1.69E-46 |
| MS.gene055776 | MS.gene073640 | 0.827285 | 1.70E-54 | -1.69E-46 |
| MS.gene055849 | MS.gene073640 | 0.813103 | 3.03E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene073640 | 0.873166 | 1.81E-67 | -1.69E-46 |
| MS.gene055941 | MS.gene073640 | 0.833678 | 4.65E-56 | -1.69E-46 |
| MS.gene056040 | MS.gene073640 | 0.822724 | 2.03E-53 | -1.69E-46 |
| MS.gene056046 | MS.gene073640 | 0.835523 | 1.60E-56 | -1.69E-46 |
| MS.gene056166 | MS.gene073640 | 0.813779 | 2.15E-51 | -1.69E-46 |
| MS.gene056310 | MS.gene073640 | -0.814743 | 1.32E-51 | -1.69E-46 |
| MS.gene056311 | MS.gene073640 | -0.829324 | 5.49E-55 | -1.69E-46 |
| MS.gene056374 | MS.gene073640 | 0.821273 | 4.41E-53 | -1.69E-46 |
| MS.gene056409 | MS.gene073640 | 0.865719 | 4.81E-65 | -1.69E-46 |
| MS.gene056449 | MS.gene073640 | 0.815937 | 7.16E-52 | -1.69E-46 |
| MS.gene056450 | MS.gene073640 | 0.876317 | 1.54E-68 | -1.69E-46 |
| MS.gene056504 | MS.gene073640 | 0.902143 | 1.31E-78 | -1.69E-46 |
| MS.gene056510 | MS.gene073640 | 0.887883 | 9.64E-73 | -1.69E-46 |
| MS.gene056549 | MS.gene073640 | 0.810502 | 1.12E-50 | -1.69E-46 |
| MS.gene056550 | MS.gene073640 | -0.80813 | 3.60E-50 | -1.69E-46 |
| MS.gene056610 | MS.gene073640 | 0.860249 | 2.36E-63 | -1.69E-46 |
| MS.gene056657 | MS.gene073640 | 0.864411 | 1.24E-64 | -1.69E-46 |
| MS.gene056692 | MS.gene073640 | 0.871558 | 6.24E-67 | -1.69E-46 |
| MS.gene056878 | MS.gene073640 | 0.84723 | 1.32E-59 | -1.69E-46 |
| MS.gene057014 | MS.gene073640 | -0.825104 | 5.62E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene073640 | 0.804842 | 1.78E-49 | -1.69E-46 |
| MS.gene057499 | MS.gene073640 | -0.806991 | 6.28E-50 | -1.69E-46 |
| MS.gene057658 | MS.gene073640 | 0.821322 | 4.30E-53 | -1.69E-46 |
| MS.gene057687 | MS.gene073640 | 0.821417 | 4.08E-53 | -1.69E-46 |
| MS.gene057831 | MS.gene073640 | 0.874407 | 6.92E-68 | -1.69E-46 |
| MS.gene057872 | MS.gene073640 | 0.839348 | 1.67E-57 | -1.69E-46 |
| MS.gene05787 | MS.gene073640 | 0.850179 | 2.01E-60 | -1.69E-46 |
| MS.gene058157 | MS.gene073640 | 0.845312 | 4.39E-59 | -1.69E-46 |
| MS.gene058183 | MS.gene073640 | 0.813909 | 2.02E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene073640 | -0.80243 | 5.63E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene073640 | 0.817663 | 2.93E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene073640 | 0.866102 | 3.64E-65 | -1.69E-46 |
| MS.gene058419 | MS.gene073640 | 0.866519 | 2.69E-65 | -1.69E-46 |
| MS.gene058544 | MS.gene073640 | 0.833012 | 6.81E-56 | -1.69E-46 |
| MS.gene058719 | MS.gene073640 | 0.84807 | 7.74E-60 | -1.69E-46 |
| MS.gene058773 | MS.gene073640 | 0.865561 | 5.40E-65 | -1.69E-46 |
| MS.gene058838 | MS.gene073640 | 0.816818 | 4.54E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene073640 | 0.897332 | 1.56E-76 | -1.69E-46 |
| MS.gene059023 | MS.gene073640 | 0.881128 | 3.10E-70 | -1.69E-46 |
| MS.gene059034 | MS.gene073640 | 0.80909 | 2.25E-50 | -1.69E-46 |
| MS.gene059052 | MS.gene073640 | -0.838301 | 3.12E-57 | -1.69E-46 |
| MS.gene05912 | MS.gene073640 | 0.848244 | 6.93E-60 | -1.69E-46 |
| MS.gene059367 | MS.gene073640 | 0.824209 | 9.14E-54 | -1.69E-46 |
| MS.gene059667 | MS.gene073640 | 0.805908 | 1.06E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene073640 | 0.874889 | 4.74E-68 | -1.69E-46 |
| MS.gene059718 | MS.gene073640 | 0.865695 | 4.90E-65 | -1.69E-46 |
| MS.gene059756 | MS.gene073640 | 0.842366 | 2.70E-58 | -1.69E-46 |
| MS.gene059801 | MS.gene073640 | 0.866817 | 2.16E-65 | -1.69E-46 |
| MS.gene059837 | MS.gene073640 | 0.908008 | 2.73E-81 | -1.69E-46 |
| MS.gene059865 | MS.gene073640 | 0.881788 | 1.79E-70 | -1.69E-46 |
| MS.gene05996 | MS.gene073640 | 0.805658 | 1.20E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene073640 | 0.877553 | 5.73E-69 | -1.69E-46 |
| MS.gene060187 | MS.gene073640 | -0.833982 | 3.90E-56 | -1.69E-46 |
| MS.gene060339 | MS.gene073640 | 0.816867 | 4.43E-52 | -1.69E-46 |
| MS.gene060482 | MS.gene073640 | 0.813977 | 1.95E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene073640 | -0.877863 | 4.47E-69 | -1.69E-46 |
| MS.gene060602 | MS.gene073640 | -0.815605 | 8.48E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene073640 | 0.900311 | 8.31E-78 | -1.69E-46 |
| MS.gene060762 | MS.gene073640 | 0.874607 | 5.92E-68 | -1.69E-46 |
| MS.gene060778 | MS.gene073640 | 0.885354 | 8.74E-72 | -1.69E-46 |
| MS.gene06077 | MS.gene073640 | 0.935142 | 1.35E-96 | -1.69E-46 |
| MS.gene06092 | MS.gene073640 | 0.817064 | 4.00E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene073640 | 0.884496 | 1.82E-71 | -1.69E-46 |
| MS.gene061150 | MS.gene073640 | 0.846211 | 2.50E-59 | -1.69E-46 |
| MS.gene061171 | MS.gene073640 | 0.818922 | 1.52E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073640.t1 | MTR_1g050530 | 98.857 | 175 | 2 | 0 | 130 | 304 | 30 | 204 | 9.04e-125 | 356 |
| MS.gene073640.t1 | MTR_1g050530 | 97.826 | 138 | 3 | 0 | 130 | 267 | 30 | 167 | 3.70e-96 | 281 |
| MS.gene073640.t1 | MTR_1g010080 | 24.737 | 190 | 127 | 4 | 128 | 304 | 8 | 194 | 2.73e-15 | 73.9 |
| MS.gene073640.t1 | MTR_1g010080 | 25.000 | 192 | 124 | 5 | 128 | 304 | 40 | 226 | 3.14e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073640.t1 | AT5G04440 | 76.023 | 171 | 41 | 0 | 134 | 304 | 63 | 233 | 2.40e-94 | 279 |
| MS.gene073640.t1 | AT5G04440 | 76.023 | 171 | 41 | 0 | 134 | 304 | 63 | 233 | 4.52e-94 | 279 |
| MS.gene073640.t1 | AT4G31115 | 28.161 | 174 | 113 | 4 | 134 | 298 | 54 | 224 | 3.92e-19 | 85.1 |
| MS.gene073640.t1 | AT4G31115 | 28.161 | 174 | 113 | 4 | 134 | 298 | 78 | 248 | 7.93e-19 | 84.7 |
Find 71 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCGAGCATACCCAAGATTT+TGG | 0.239291 | 1.1:-34991388 | MS.gene073640:CDS |
| ACAAGAGAAGGTCGAGGAAT+TGG | 0.294857 | 1.1:-34990195 | MS.gene073640:CDS |
| AGAGGTGATAACCTCTGTTT+AGG | 0.303128 | 1.1:+34990989 | None:intergenic |
| AGTCACTTTCACACGATATC+TGG | 0.313592 | 1.1:+34989131 | None:intergenic |
| GCTGATTCAATTGCTTGCTT+TGG | 0.335311 | 1.1:+34988933 | None:intergenic |
| AACACTGAATATTGACTTGC+TGG | 0.347727 | 1.1:+34989899 | None:intergenic |
| AAGCATGCCCGCCAAAATCT+TGG | 0.350164 | 1.1:+34991377 | None:intergenic |
| AACAAACCTGTGACATAAAA+CGG | 0.350906 | 1.1:+34988868 | None:intergenic |
| GCATCCCTTTGCGAACTATA+CGG | 0.354764 | 1.1:-34991087 | MS.gene073640:CDS |
| TATGTCGACATCAGGGTTAA+TGG | 0.385605 | 1.1:+34991342 | None:intergenic |
| AAAGTAGGTACCTACCTTGC+AGG | 0.389681 | 1.1:+34989733 | None:intergenic |
| ACAAACCTGTGACATAAAAC+GGG | 0.400266 | 1.1:+34988869 | None:intergenic |
| TCAACTTTGACAAGCAAAAC+AGG | 0.418135 | 1.1:+34989791 | None:intergenic |
| AATTGGGATGGCTTCGTCAT+TGG | 0.418577 | 1.1:-34990178 | MS.gene073640:intron |
| CAAGAGAAGGTCGAGGAATT+GGG | 0.424177 | 1.1:-34990194 | MS.gene073640:CDS |
| GAGCTTAATGCAACAGCCAT+TGG | 0.425284 | 1.1:+34989760 | None:intergenic |
| ATGTGGTAATGCAGCTATAA+TGG | 0.425880 | 1.1:-34989158 | MS.gene073640:intron |
| TTTCTTACATTACAGCTTCA+GGG | 0.426577 | 1.1:-34989660 | MS.gene073640:intron |
| AATTTGTAGTTGAATATATG+AGG | 0.428648 | 1.1:-34989925 | MS.gene073640:intron |
| TAATCTTGAGTATTTGTTCA+AGG | 0.430233 | 1.1:+34988898 | None:intergenic |
| TTAGTGACTATGTCGACATC+AGG | 0.446702 | 1.1:+34991334 | None:intergenic |
| AAGCAAGCAATTGAATCAGC+TGG | 0.447176 | 1.1:-34988930 | MS.gene073640:CDS |
| AGCAACGAAACGGGCTTTGT+GGG | 0.456712 | 1.1:+34990068 | None:intergenic |
| GCTCAGAACGACAAGTTTGA+TGG | 0.461254 | 1.1:-34989621 | MS.gene073640:intron |
| CGTTCTGAGCAGCGACCATA+GGG | 0.461288 | 1.1:+34989634 | None:intergenic |
| AGCTTAATGCAACAGCCATT+GGG | 0.464658 | 1.1:+34989761 | None:intergenic |
| GTGAGGCGAGCCACGTAGTT+CGG | 0.470924 | 1.1:+34991418 | None:intergenic |
| AGCATGCCCGCCAAAATCTT+GGG | 0.475632 | 1.1:+34991378 | None:intergenic |
| GACATAGTCACTAATATGAT+AGG | 0.477025 | 1.1:-34991325 | MS.gene073640:intron |
| GAGCAACGAAACGGGCTTTG+TGG | 0.479564 | 1.1:+34990067 | None:intergenic |
| CTTACGGCGAGCAACGAAAC+GGG | 0.479910 | 1.1:+34990059 | None:intergenic |
| GAGGAACATGCTTGTCTCAA+TGG | 0.483440 | 1.1:+34991026 | None:intergenic |
| TCGTTCTGAGCAGCGACCAT+AGG | 0.486521 | 1.1:+34989633 | None:intergenic |
| TGTCTTGGCTCGTGTGTGGA+TGG | 0.497856 | 1.1:+34990220 | None:intergenic |
| GGTATTGCTTTGAAAGCGAA+TGG | 0.504001 | 1.1:+34988954 | None:intergenic |
| CCGTTTCGTTGCTCGCCGTA+AGG | 0.506017 | 1.1:-34990058 | MS.gene073640:CDS |
| GAACAGAAACAGACTCCTTA+CGG | 0.507973 | 1.1:+34990043 | None:intergenic |
| CCTTACGGCGAGCAACGAAA+CGG | 0.521735 | 1.1:+34990058 | None:intergenic |
| ACAGCTTCAGGGTTCCCCTA+TGG | 0.530007 | 1.1:-34989649 | MS.gene073640:intron |
| CACATCAGACACTATAATTG+AGG | 0.533833 | 1.1:-34989083 | MS.gene073640:intron |
| ATTCAGTGTTGGACGCTGAA+AGG | 0.542698 | 1.1:-34989886 | MS.gene073640:CDS |
| ACATCTCTCAACACGATGAT+GGG | 0.558137 | 1.1:-34991466 | None:intergenic |
| AGCAAGCAATTGAATCAGCT+GGG | 0.564610 | 1.1:-34988929 | MS.gene073640:CDS |
| ACTACTTACTTAGGGGACGT+TGG | 0.565216 | 1.1:+34990013 | None:intergenic |
| GGCTCGTGTGTGGATGGATG+TGG | 0.570597 | 1.1:+34990226 | None:intergenic |
| CATTAAGCTCTTATCCTGCA+AGG | 0.575460 | 1.1:-34989747 | MS.gene073640:intron |
| AGCCAAGACAAAACAAGAGA+AGG | 0.578775 | 1.1:-34990207 | MS.gene073640:CDS |
| AAACGGGCTTTGTGGGTCGA+AGG | 0.589377 | 1.1:+34990075 | None:intergenic |
| CGGGCTTTGTGGGTCGAAGG+AGG | 0.597317 | 1.1:+34990078 | None:intergenic |
| AGCAAGTCAATATTCAGTGT+TGG | 0.598943 | 1.1:-34989897 | MS.gene073640:CDS |
| TCTTGGGTATGCTCGACAGA+TGG | 0.608448 | 1.1:+34991394 | None:intergenic |
| GGAACCGTATAGTTCGCAAA+GGG | 0.610691 | 1.1:+34991083 | None:intergenic |
| TTATGCAGTCATTGTGACCA+TGG | 0.615121 | 1.1:-34991201 | MS.gene073640:intron |
| AAGTGACTCAGATAAGTCAC+TGG | 0.624597 | 1.1:-34989116 | MS.gene073640:CDS |
| TGGAACCGTATAGTTCGCAA+AGG | 0.634349 | 1.1:+34991082 | None:intergenic |
| TAGTGACTATGTCGACATCA+GGG | 0.637596 | 1.1:+34991335 | None:intergenic |
| GACAAAACAAGAGAAGGTCG+AGG | 0.640385 | 1.1:-34990201 | MS.gene073640:CDS |
| TGGAGTTGAGACGCTTGCGA+TGG | 0.645874 | 1.1:+34991062 | None:intergenic |
| CAACCATAGTAGAACTTGTG+AGG | 0.646396 | 1.1:-34991109 | MS.gene073640:intron |
| AGAAGGTCGAGGAATTGGGA+TGG | 0.662357 | 1.1:-34990190 | MS.gene073640:CDS |
| AAAGTTGAACAACAACCCAA+TGG | 0.669566 | 1.1:-34989776 | MS.gene073640:CDS |
| ATACCTCACAAGTTCTACCA+TGG | 0.682880 | 1.1:+34991184 | None:intergenic |
| CAAACCTGTGACATAAAACG+GGG | 0.689169 | 1.1:+34988870 | None:intergenic |
| TTAGGTTTGTTGAATGTGCG+AGG | 0.690397 | 1.1:+34991007 | None:intergenic |
| TCAATGGTAAGAGCATGTGA+TGG | 0.692335 | 1.1:+34991042 | None:intergenic |
| AAGGATTGAACGTGTGAGTG+AGG | 0.702772 | 1.1:-34989867 | MS.gene073640:CDS |
| CATTCAACAAACCTAAACAG+AGG | 0.709968 | 1.1:-34991000 | MS.gene073640:intron |
| CATGCTTCATCCGAACTACG+TGG | 0.720237 | 1.1:-34991428 | MS.gene073640:CDS |
| TGACCATGGTAGAACTTGTG+AGG | 0.721040 | 1.1:-34991187 | MS.gene073640:intron |
| TATGCTCGACAGATGGTGTG+AGG | 0.727965 | 1.1:+34991401 | None:intergenic |
| GTTCTGAGCAGCGACCATAG+GGG | 0.776434 | 1.1:+34989635 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAATTTTATATTTAATCAA+AGG | - | chr1.1:34989891-34989910 | MS.gene073640:CDS | 10.0% |
| !!! | TGATTTTTTTTAACTAAAAA+TGG | - | chr1.1:34989980-34989999 | MS.gene073640:intron | 10.0% |
| !!! | TTTTAGTTAAAAAAAATCAT+AGG | + | chr1.1:34989979-34989998 | None:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1.1:34989419-34989438 | MS.gene073640:intron | 100.0% |
| !! | AAAATAAAAATCAGAAGAAA+AGG | + | chr1.1:34991282-34991301 | None:intergenic | 15.0% |
| !! | AAGAAAACAAGAAATAAGAA+AGG | + | chr1.1:34990643-34990662 | None:intergenic | 20.0% |
| !! | AATTTGTAGTTGAATATATG+AGG | - | chr1.1:34990392-34990411 | MS.gene073640:intron | 20.0% |
| !! | AGAAAACAAGAAATAAGAAA+GGG | + | chr1.1:34990642-34990661 | None:intergenic | 20.0% |
| !! | GATTTAATGATAAGTAAAGT+AGG | + | chr1.1:34990602-34990621 | None:intergenic | 20.0% |
| !! | TTTAACAATGTTGTTCATAA+GGG | + | chr1.1:34989160-34989179 | None:intergenic | 20.0% |
| !!! | AATTAAGTTTTTCACATTTG+AGG | - | chr1.1:34990498-34990517 | MS.gene073640:intron | 20.0% |
| ! | AAAGAATGATGACATTGAAT+GGG | + | chr1.1:34989382-34989401 | None:intergenic | 25.0% |
| ! | AAAGGGTGAAAAAGAAAATA+TGG | + | chr1.1:34990625-34990644 | None:intergenic | 25.0% |
| ! | AAGGGTGAAAAAGAAAATAT+GGG | + | chr1.1:34990624-34990643 | None:intergenic | 25.0% |
| ! | ACGGTGATTTCAAAATTATA+TGG | - | chr1.1:34991006-34991025 | MS.gene073640:CDS | 25.0% |
| ! | GTCATTTCAATACTTTAATG+TGG | - | chr1.1:34991142-34991161 | MS.gene073640:intron | 25.0% |
| ! | GTTTAACAATGTTGTTCATA+AGG | + | chr1.1:34989161-34989180 | None:intergenic | 25.0% |
| ! | TAAAGAATGATGACATTGAA+TGG | + | chr1.1:34989383-34989402 | None:intergenic | 25.0% |
| ! | TAATCTTGAGTATTTGTTCA+AGG | + | chr1.1:34991422-34991441 | None:intergenic | 25.0% |
| ! | TGAATGATACTACTTACTTA+GGG | + | chr1.1:34990315-34990334 | None:intergenic | 25.0% |
| ! | TTGAATGATACTACTTACTT+AGG | + | chr1.1:34990316-34990335 | None:intergenic | 25.0% |
| ! | TTTAACTAAAAATGGTCGAA+GGG | - | chr1.1:34989988-34990007 | MS.gene073640:intron | 25.0% |
| !!! | AATTTTGGTTTGTCAAAACA+TGG | - | chr1.1:34990017-34990036 | MS.gene073640:intron | 25.0% |
| !!! | TTTTAACTAAAAATGGTCGA+AGG | - | chr1.1:34989987-34990006 | MS.gene073640:intron | 25.0% |
| AAAGAGTTCCCTTTATATAG+AGG | + | chr1.1:34989706-34989725 | None:intergenic | 30.0% | |
| AACAAACCTGTGACATAAAA+CGG | + | chr1.1:34991452-34991471 | None:intergenic | 30.0% | |
| AAGGGAAAAAGGAAATTTGT+AGG | - | chr1.1:34991081-34991100 | MS.gene073640:CDS | 30.0% | |
| AGAGATTAGAATCTACCTTT+GGG | + | chr1.1:34989735-34989754 | None:intergenic | 30.0% | |
| AGTAAATGTGAATGTAGCTA+AGG | - | chr1.1:34990977-34990996 | MS.gene073640:intron | 30.0% | |
| AGTAACAGTCAAAGAATACA+TGG | + | chr1.1:34990871-34990890 | None:intergenic | 30.0% | |
| AGTCAGTATGAGATTAGAAT+AGG | + | chr1.1:34989767-34989786 | None:intergenic | 30.0% | |
| ATATTGCCAAATGCGAAATT+TGG | + | chr1.1:34989507-34989526 | None:intergenic | 30.0% | |
| GAATGATACTACTTACTTAG+GGG | + | chr1.1:34990314-34990333 | None:intergenic | 30.0% | |
| GACATAGTCACTAATATGAT+AGG | - | chr1.1:34988992-34989011 | MS.gene073640:intron | 30.0% | |
| GTCAGTATGAGATTAGAATA+GGG | + | chr1.1:34989766-34989785 | None:intergenic | 30.0% | |
| TATTGCCAAATGCGAAATTT+GGG | + | chr1.1:34989506-34989525 | None:intergenic | 30.0% | |
| TCAGTATGAGATTAGAATAG+GGG | + | chr1.1:34989765-34989784 | None:intergenic | 30.0% | |
| TGTATTGGGTCTAAGTAATT+GGG | + | chr1.1:34989476-34989495 | None:intergenic | 30.0% | |
| TTGTATTGGGTCTAAGTAAT+TGG | + | chr1.1:34989477-34989496 | None:intergenic | 30.0% | |
| TTTCTTACATTACAGCTTCA+GGG | - | chr1.1:34990657-34990676 | MS.gene073640:intron | 30.0% | |
| ! | AATTTGGGATGTGTTTGTAT+TGG | + | chr1.1:34989491-34989510 | None:intergenic | 30.0% |
| ! | ATTTGGGATGTGTTTGTATT+GGG | + | chr1.1:34989490-34989509 | None:intergenic | 30.0% |
| ! | TTTTCTTACATTACAGCTTC+AGG | - | chr1.1:34990656-34990675 | MS.gene073640:intron | 30.0% |
| !! | ATTTGATTCATGCTACTTTC+AGG | - | chr1.1:34991116-34991135 | MS.gene073640:intron | 30.0% |
| !! | TGAAATGGGTTGAACAAAAA+TGG | + | chr1.1:34990171-34990190 | None:intergenic | 30.0% |
| !!! | AAACATGGTTTGGTTTGTTT+TGG | - | chr1.1:34990032-34990051 | MS.gene073640:CDS | 30.0% |
| AAACACCCACCTCTATATAA+AGG | - | chr1.1:34989694-34989713 | MS.gene073640:intron | 35.0% | |
| AAAGTTGAACAACAACCCAA+TGG | - | chr1.1:34990541-34990560 | MS.gene073640:intron | 35.0% | |
| AACACCCACCTCTATATAAA+GGG | - | chr1.1:34989695-34989714 | MS.gene073640:intron | 35.0% | |
| AATGTAGCTAAGGATGGTTA+CGG | - | chr1.1:34990987-34991006 | MS.gene073640:intron | 35.0% | |
| AATGTGAATGTAGCTAAGGA+TGG | - | chr1.1:34990981-34991000 | MS.gene073640:intron | 35.0% | |
| ACAAACCTGTGACATAAAAC+GGG | + | chr1.1:34991451-34991470 | None:intergenic | 35.0% | |
| AGCAAGTCAATATTCAGTGT+TGG | - | chr1.1:34990420-34990439 | MS.gene073640:intron | 35.0% | |
| AGTTCCCTTTATATAGAGGT+GGG | + | chr1.1:34989702-34989721 | None:intergenic | 35.0% | |
| ATCAGACACTATAATTGAGG+TGG | - | chr1.1:34991237-34991256 | MS.gene073640:intron | 35.0% | |
| CACATCAGACACTATAATTG+AGG | - | chr1.1:34991234-34991253 | MS.gene073640:intron | 35.0% | |
| CATTCAACAAACCTAAACAG+AGG | - | chr1.1:34989317-34989336 | MS.gene073640:intron | 35.0% | |
| GAGAGATTAGAATCTACCTT+TGG | + | chr1.1:34989736-34989755 | None:intergenic | 35.0% | |
| GAGATTAGAATCTACCTTTG+GGG | + | chr1.1:34989734-34989753 | None:intergenic | 35.0% | |
| TACCTCTACTTGAGTAAACA+TGG | + | chr1.1:34991038-34991057 | None:intergenic | 35.0% | |
| TCAAAGAATACATGGAGCAA+GGG | + | chr1.1:34990863-34990882 | None:intergenic | 35.0% | |
| TCAACTTTGACAAGCAAAAC+AGG | + | chr1.1:34990529-34990548 | None:intergenic | 35.0% | |
| TGAAATGATGTAGTTCGCAT+GGG | + | chr1.1:34989081-34989100 | None:intergenic | 35.0% | |
| TGCATTGCTATGTCAAATTC+AGG | - | chr1.1:34991326-34991345 | MS.gene073640:CDS | 35.0% | |
| TTTATCAAGAGCAACGACTT+GGG | - | chr1.1:34989399-34989418 | MS.gene073640:intron | 35.0% | |
| ! | ATGTGGTAATGCAGCTATAA+TGG | - | chr1.1:34991159-34991178 | MS.gene073640:intron | 35.0% |
| ! | CTTTTTCCCTTTCTCAGAAA+GGG | + | chr1.1:34991072-34991091 | None:intergenic | 35.0% |
| ! | GCTTCAATTGATAACTGGAA+CGG | + | chr1.1:34989818-34989837 | None:intergenic | 35.0% |
| ! | GGAATGCTTCAATTGATAAC+TGG | + | chr1.1:34989823-34989842 | None:intergenic | 35.0% |
| ! | TGGTTTGTCAAAACATGGTT+TGG | - | chr1.1:34990022-34990041 | MS.gene073640:CDS | 35.0% |
| !! | AACACTGAATATTGACTTGC+TGG | + | chr1.1:34990421-34990440 | None:intergenic | 35.0% |
| !! | AGTTGATGACAACGTGAAAT+GGG | + | chr1.1:34990185-34990204 | None:intergenic | 35.0% |
| !! | GTCGAAGGGAGTATAAATTT+TGG | - | chr1.1:34990002-34990021 | MS.gene073640:intron | 35.0% |
| !!! | TGGTTTGGTTTGTTTTGGAA+CGG | - | chr1.1:34990037-34990056 | MS.gene073640:CDS | 35.0% |
| AAATGTAGACTCGCGATACA+AGG | - | chr1.1:34990904-34990923 | MS.gene073640:intron | 40.0% | |
| AACAGTAACGGTCATCATCA+TGG | - | chr1.1:34989589-34989608 | MS.gene073640:intron | 40.0% | |
| AAGCAAGCAATTGAATCAGC+TGG | - | chr1.1:34991387-34991406 | MS.gene073640:CDS | 40.0% | |
| AAGTGACTCAGATAAGTCAC+TGG | - | chr1.1:34991201-34991220 | MS.gene073640:intron | 40.0% | |
| ACTACCGATGCAGTTATGTA+CGG | + | chr1.1:34989850-34989869 | None:intergenic | 40.0% | |
| AGAGGTGATAACCTCTGTTT+AGG | + | chr1.1:34989331-34989350 | None:intergenic | 40.0% | |
| AGATCAAACAACTCGTATCG+TGG | + | chr1.1:34990822-34990841 | None:intergenic | 40.0% | |
| AGCAAGCAATTGAATCAGCT+GGG | - | chr1.1:34991388-34991407 | MS.gene073640:CDS | 40.0% | |
| AGCCAAGACAAAACAAGAGA+AGG | - | chr1.1:34990110-34990129 | MS.gene073640:intron | 40.0% | |
| AGCTTAATGCAACAGCCATT+GGG | + | chr1.1:34990559-34990578 | None:intergenic | 40.0% | |
| ATACCTCACAAGTTCTACCA+TGG | + | chr1.1:34989136-34989155 | None:intergenic | 40.0% | |
| ATGCCTCACAAGTTCTACTA+TGG | + | chr1.1:34989214-34989233 | None:intergenic | 40.0% | |
| CAAACCTGTGACATAAAACG+GGG | + | chr1.1:34991450-34991469 | None:intergenic | 40.0% | |
| CAACCATAGTAGAACTTGTG+AGG | - | chr1.1:34989208-34989227 | MS.gene073640:intron | 40.0% | |
| CACATCCCAAATTTCGCATT+TGG | - | chr1.1:34989498-34989517 | MS.gene073640:intron | 40.0% | |
| CATTAAGCTCTTATCCTGCA+AGG | - | chr1.1:34990570-34990589 | MS.gene073640:intron | 40.0% | |
| CCAGTTCAAACGAACAGTAA+CGG | - | chr1.1:34989577-34989596 | MS.gene073640:intron | 40.0% | |
| CTCCATGTTTACTCAAGTAG+AGG | - | chr1.1:34991033-34991052 | MS.gene073640:CDS | 40.0% | |
| CTCTACTTGAGTAAACATGG+AGG | + | chr1.1:34991035-34991054 | None:intergenic | 40.0% | |
| CTGAAATGATGTAGTTCGCA+TGG | + | chr1.1:34989082-34989101 | None:intergenic | 40.0% | |
| CTTTATCAAGAGCAACGACT+TGG | - | chr1.1:34989398-34989417 | MS.gene073640:intron | 40.0% | |
| GAACAGAAACAGACTCCTTA+CGG | + | chr1.1:34990277-34990296 | None:intergenic | 40.0% | |
| GAGTTCCCTTTATATAGAGG+TGG | + | chr1.1:34989703-34989722 | None:intergenic | 40.0% | |
| GTCAAAGAATACATGGAGCA+AGG | + | chr1.1:34990864-34990883 | None:intergenic | 40.0% | |
| GTCGAATCTCGATCATTAGT+TGG | - | chr1.1:34990753-34990772 | MS.gene073640:intron | 40.0% | |
| TAGTGACTATGTCGACATCA+GGG | + | chr1.1:34988985-34989004 | None:intergenic | 40.0% | |
| TATGTCGACATCAGGGTTAA+TGG | + | chr1.1:34988978-34988997 | None:intergenic | 40.0% | |
| TTAGTGACTATGTCGACATC+AGG | + | chr1.1:34988986-34989005 | None:intergenic | 40.0% | |
| TTATCAAGAGCAACGACTTG+GGG | - | chr1.1:34989400-34989419 | MS.gene073640:intron | 40.0% | |
| TTATGCAGTCATTGTGACCA+TGG | - | chr1.1:34989116-34989135 | MS.gene073640:CDS | 40.0% | |
| ! | AGTCACTTTCACACGATATC+TGG | + | chr1.1:34991189-34991208 | None:intergenic | 40.0% |
| ! | CCTTTCTGAGAAAGGGAAAA+AGG | - | chr1.1:34991070-34991089 | MS.gene073640:CDS | 40.0% |
| ! | CCTTTTTCCCTTTCTCAGAA+AGG | + | chr1.1:34991073-34991092 | None:intergenic | 40.0% |
| ! | GCTGATTCAATTGCTTGCTT+TGG | + | chr1.1:34991387-34991406 | None:intergenic | 40.0% |
| ! | TCAATGGTAAGAGCATGTGA+TGG | + | chr1.1:34989278-34989297 | None:intergenic | 40.0% |
| ! | TGTATCGCGAGTCTACATTT+TGG | + | chr1.1:34990904-34990923 | None:intergenic | 40.0% |
| !! | GAGTTGATGACAACGTGAAA+TGG | + | chr1.1:34990186-34990205 | None:intergenic | 40.0% |
| !! | GGTATTGCTTTGAAAGCGAA+TGG | + | chr1.1:34991366-34991385 | None:intergenic | 40.0% |
| !! | TTAGGTTTGTTGAATGTGCG+AGG | + | chr1.1:34989313-34989332 | None:intergenic | 40.0% |
| !!! | GACCTTCTCTTGTTTTGTCT+TGG | + | chr1.1:34990115-34990134 | None:intergenic | 40.0% |
| !!! | TTGGTTTGTTTTGGAACGGA+TGG | - | chr1.1:34990041-34990060 | MS.gene073640:CDS | 40.0% |
| AAAGTAGGTACCTACCTTGC+AGG | + | chr1.1:34990587-34990606 | None:intergenic | 45.0% | |
| AAGCTCTTATCCTGCAAGGT+AGG | - | chr1.1:34990574-34990593 | MS.gene073640:intron | 45.0% | |
| AAGGATTGAACGTGTGAGTG+AGG | - | chr1.1:34990450-34990469 | MS.gene073640:intron | 45.0% | |
| AAGTTCTCTCATGACTGAGC+TGG | + | chr1.1:34989048-34989067 | None:intergenic | 45.0% | |
| AATTGGGATGGCTTCGTCAT+TGG | - | chr1.1:34990139-34990158 | MS.gene073640:intron | 45.0% | |
| ACAAGAGAAGGTCGAGGAAT+TGG | - | chr1.1:34990122-34990141 | MS.gene073640:intron | 45.0% | |
| ACTACTTACTTAGGGGACGT+TGG | + | chr1.1:34990307-34990326 | None:intergenic | 45.0% | |
| AGCACACGTGTGTTGTACAA+CGG | - | chr1.1:34989665-34989684 | MS.gene073640:intron | 45.0% | |
| ATGATGACATTGAATGGGCG+AGG | + | chr1.1:34989377-34989396 | None:intergenic | 45.0% | |
| CAAGAGAAGGTCGAGGAATT+GGG | - | chr1.1:34990123-34990142 | MS.gene073640:intron | 45.0% | |
| CAGTCATGAGAGAACTTGTG+AGG | - | chr1.1:34989051-34989070 | MS.gene073640:intron | 45.0% | |
| CCGTTACTGTTCGTTTGAAC+TGG | + | chr1.1:34989580-34989599 | None:intergenic | 45.0% | |
| GACAAAACAAGAGAAGGTCG+AGG | - | chr1.1:34990116-34990135 | MS.gene073640:intron | 45.0% | |
| GAGCTTAATGCAACAGCCAT+TGG | + | chr1.1:34990560-34990579 | None:intergenic | 45.0% | |
| GAGGAACATGCTTGTCTCAA+TGG | + | chr1.1:34989294-34989313 | None:intergenic | 45.0% | |
| GCATCCCTTTGCGAACTATA+CGG | - | chr1.1:34989230-34989249 | MS.gene073640:intron | 45.0% | |
| GCTCAGAACGACAAGTTTGA+TGG | - | chr1.1:34990696-34990715 | MS.gene073640:intron | 45.0% | |
| GGAACCGTATAGTTCGCAAA+GGG | + | chr1.1:34989237-34989256 | None:intergenic | 45.0% | |
| TGACCATGGTAGAACTTGTG+AGG | - | chr1.1:34989130-34989149 | MS.gene073640:CDS | 45.0% | |
| TGGAACCGTATAGTTCGCAA+AGG | + | chr1.1:34989238-34989257 | None:intergenic | 45.0% | |
| TTGCTGAAGCAAGAAGTGGA+AGG | + | chr1.1:34990217-34990236 | None:intergenic | 45.0% | |
| ! | AATTGATAACTGGAACGGCG+AGG | + | chr1.1:34989813-34989832 | None:intergenic | 45.0% |
| ! | ATTCAGTGTTGGACGCTGAA+AGG | - | chr1.1:34990431-34990450 | MS.gene073640:intron | 45.0% |
| ! | ATTGATAACTGGAACGGCGA+GGG | + | chr1.1:34989812-34989831 | None:intergenic | 45.0% |
| ! | CTCGTTCCCTTTCTGAGAAA+GGG | - | chr1.1:34991063-34991082 | MS.gene073640:CDS | 45.0% |
| ! | GAGCATACCCAAGATTTTGG+CGG | - | chr1.1:34988932-34988951 | MS.gene073640:CDS | 45.0% |
| ! | GTCGAGCATACCCAAGATTT+TGG | - | chr1.1:34988929-34988948 | MS.gene073640:CDS | 45.0% |
| ! | TATCAAGAGCAACGACTTGG+GGG | - | chr1.1:34989401-34989420 | MS.gene073640:intron | 45.0% |
| ! | TCGGTAGTCACTTTCTGATC+AGG | - | chr1.1:34989862-34989881 | MS.gene073640:CDS | 45.0% |
| ! | TCTCGTTCCCTTTCTGAGAA+AGG | - | chr1.1:34991062-34991081 | MS.gene073640:CDS | 45.0% |
| !! | AGCATACCCAAGATTTTGGC+GGG | - | chr1.1:34988933-34988952 | MS.gene073640:CDS | 45.0% |
| AAGCATGCCCGCCAAAATCT+TGG | + | chr1.1:34988943-34988962 | None:intergenic | 50.0% | |
| ACCGATGCAGTTATGTACGG+TGG | + | chr1.1:34989847-34989866 | None:intergenic | 50.0% | |
| AGAAGGTCGAGGAATTGGGA+TGG | - | chr1.1:34990127-34990146 | MS.gene073640:intron | 50.0% | |
| AGCATGCCCGCCAAAATCTT+GGG | + | chr1.1:34988942-34988961 | None:intergenic | 50.0% | |
| CATGCTTCATCCGAACTACG+TGG | - | chr1.1:34988889-34988908 | MS.gene073640:CDS | 50.0% | |
| CTCGACGGTTACGAATTCAC+AGG | + | chr1.1:34989647-34989666 | None:intergenic | 50.0% | |
| GAACTCTTTGCAGTCCCCAA+AGG | - | chr1.1:34989717-34989736 | MS.gene073640:intron | 50.0% | |
| GAGCAAGGGATCTCGATAGT+TGG | + | chr1.1:34990849-34990868 | None:intergenic | 50.0% | |
| GATGCAGTTATGTACGGTGG+CGG | + | chr1.1:34989844-34989863 | None:intergenic | 50.0% | |
| GCCACCGTACATAACTGCAT+CGG | - | chr1.1:34989843-34989862 | MS.gene073640:CDS | 50.0% | |
| GGAGTTGCTGAAGCAAGAAG+TGG | + | chr1.1:34990221-34990240 | None:intergenic | 50.0% | |
| GTAGACTCGCGATACAAGGA+GGG | - | chr1.1:34990908-34990927 | MS.gene073640:intron | 50.0% | |
| TACAACACACGTGTGCTCGA+CGG | + | chr1.1:34989662-34989681 | None:intergenic | 50.0% | |
| TATGCTCGACAGATGGTGTG+AGG | + | chr1.1:34988919-34988938 | None:intergenic | 50.0% | |
| TCTAAAAGAGCTCCCACGAG+CGG | - | chr1.1:34989348-34989367 | MS.gene073640:intron | 50.0% | |
| TCTTGGGTATGCTCGACAGA+TGG | + | chr1.1:34988926-34988945 | None:intergenic | 50.0% | |
| TGTAGACTCGCGATACAAGG+AGG | - | chr1.1:34990907-34990926 | MS.gene073640:intron | 50.0% | |
| ! | AGCAACGAAACGGGCTTTGT+GGG | + | chr1.1:34990252-34990271 | None:intergenic | 50.0% |
| ! | ATCAAGAGCAACGACTTGGG+GGG | - | chr1.1:34989402-34989421 | MS.gene073640:intron | 50.0% |
| ! | GCTTCCCCGTTTTATGTCAC+AGG | - | chr1.1:34991443-34991462 | MS.gene073640:CDS | 50.0% |
| !! | CAAGAAGTGGAAGGCGTTGT+TGG | + | chr1.1:34990208-34990227 | None:intergenic | 50.0% |
| !! | GTTTTGTCTTGGCTCGTGTG+TGG | + | chr1.1:34990104-34990123 | None:intergenic | 50.0% |
| AACCGCCAAGGAGAGATTCG+TGG | + | chr1.1:34989618-34989637 | None:intergenic | 55.0% | |
| ACAGCTTCAGGGTTCCCCTA+TGG | - | chr1.1:34990668-34990687 | MS.gene073640:intron | 55.0% | |
| ACCGCCAAGGAGAGATTCGT+GGG | + | chr1.1:34989617-34989636 | None:intergenic | 55.0% | |
| CCTTACGGCGAGCAACGAAA+CGG | + | chr1.1:34990262-34990281 | None:intergenic | 55.0% | |
| CTTACGGCGAGCAACGAAAC+GGG | + | chr1.1:34990261-34990280 | None:intergenic | 55.0% | |
| TCCCACGAATCTCTCCTTGG+CGG | - | chr1.1:34989613-34989632 | MS.gene073640:intron | 55.0% | |
| TGGAGTTGAGACGCTTGCGA+TGG | + | chr1.1:34989258-34989277 | None:intergenic | 55.0% | |
| ! | AAACGGGCTTTGTGGGTCGA+AGG | + | chr1.1:34990245-34990264 | None:intergenic | 55.0% |
| ! | CACAGGAAGTGTAACCGCCA+AGG | + | chr1.1:34989630-34989649 | None:intergenic | 55.0% |
| ! | CGTTCTGAGCAGCGACCATA+GGG | + | chr1.1:34990686-34990705 | None:intergenic | 55.0% |
| ! | GAGCAACGAAACGGGCTTTG+TGG | + | chr1.1:34990253-34990272 | None:intergenic | 55.0% |
| ! | GCTCGTGGGAGCTCTTTTAG+AGG | + | chr1.1:34989349-34989368 | None:intergenic | 55.0% |
| ! | GTTCTGAGCAGCGACCATAG+GGG | + | chr1.1:34990685-34990704 | None:intergenic | 55.0% |
| ! | TCAAGAGCAACGACTTGGGG+GGG | - | chr1.1:34989403-34989422 | MS.gene073640:intron | 55.0% |
| ! | TCGTTCTGAGCAGCGACCAT+AGG | + | chr1.1:34990687-34990706 | None:intergenic | 55.0% |
| ! | TGTCTTGGCTCGTGTGTGGA+TGG | + | chr1.1:34990100-34990119 | None:intergenic | 55.0% |
| ACACACTCTCTACCCGCGAG+AGG | - | chr1.1:34989535-34989554 | MS.gene073640:intron | 60.0% | |
| CACACTCTCTACCCGCGAGA+GGG | - | chr1.1:34989536-34989555 | MS.gene073640:intron | 60.0% | |
| CCGTTTCGTTGCTCGCCGTA+AGG | - | chr1.1:34990259-34990278 | MS.gene073640:intron | 60.0% | |
| GGCTCCCACGAATCTCTCCT+TGG | - | chr1.1:34989610-34989629 | MS.gene073640:intron | 60.0% | |
| GGCTCGTGTGTGGATGGATG+TGG | + | chr1.1:34990094-34990113 | None:intergenic | 60.0% | |
| GTGAGGCGAGCCACGTAGTT+CGG | + | chr1.1:34988902-34988921 | None:intergenic | 60.0% | |
| ! | AAGAGCAACGACTTGGGGGG+GGG | - | chr1.1:34989405-34989424 | MS.gene073640:intron | 60.0% |
| ! | CAAGAGCAACGACTTGGGGG+GGG | - | chr1.1:34989404-34989423 | MS.gene073640:intron | 60.0% |
| TTGCTCCGAGCACCCTCTCG+CGG | + | chr1.1:34989551-34989570 | None:intergenic | 65.0% | |
| ! | AGAGCAACGACTTGGGGGGG+GGG | - | chr1.1:34989406-34989425 | MS.gene073640:intron | 65.0% |
| ! | CGGGCTTTGTGGGTCGAAGG+AGG | + | chr1.1:34990242-34990261 | None:intergenic | 65.0% |
| !! | TCTACCCGCGAGAGGGTGCT+CGG | - | chr1.1:34989543-34989562 | MS.gene073640:intron | 65.0% |
| ATGGGCGAGGAGACCGCTCG+TGG | + | chr1.1:34989364-34989383 | None:intergenic | 70.0% | |
| TGCTCCGAGCACCCTCTCGC+GGG | + | chr1.1:34989550-34989569 | None:intergenic | 70.0% | |
| TGGGCGAGGAGACCGCTCGT+GGG | + | chr1.1:34989363-34989382 | None:intergenic | 70.0% | |
| ! | AGCAACGACTTGGGGGGGGG+GGG | - | chr1.1:34989408-34989427 | MS.gene073640:intron | 70.0% |
| ! | GAGCAACGACTTGGGGGGGG+GGG | - | chr1.1:34989407-34989426 | MS.gene073640:intron | 70.0% |
| ! | GGGGGGGGGGGCTACTGTTT+TGG | - | chr1.1:34989431-34989450 | MS.gene073640:intron | 70.0% |
| ! | AACGACTTGGGGGGGGGGGG+GGG | - | chr1.1:34989411-34989430 | MS.gene073640:intron | 75.0% |
| ! | CAACGACTTGGGGGGGGGGG+GGG | - | chr1.1:34989410-34989429 | MS.gene073640:intron | 75.0% |
| ! | GCAACGACTTGGGGGGGGGG+GGG | - | chr1.1:34989409-34989428 | MS.gene073640:intron | 75.0% |
| !! | ACGACTTGGGGGGGGGGGGG+GGG | - | chr1.1:34989412-34989431 | MS.gene073640:intron | 80.0% |
| ! | ACTTGGGGGGGGGGGGGGGG+GGG | - | chr1.1:34989415-34989434 | MS.gene073640:intron | 85.0% |
| ! | GACTTGGGGGGGGGGGGGGG+GGG | - | chr1.1:34989414-34989433 | MS.gene073640:intron | 85.0% |
| !! | CGACTTGGGGGGGGGGGGGG+GGG | - | chr1.1:34989413-34989432 | MS.gene073640:intron | 85.0% |
| ! | CTTGGGGGGGGGGGGGGGGG+GGG | - | chr1.1:34989416-34989435 | MS.gene073640:intron | 90.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | - | chr1.1:34989417-34989436 | MS.gene073640:intron | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr1.1:34989418-34989437 | MS.gene073640:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 34988866 | 34991473 | 34988866 | ID=MS.gene073640 |
| chr1.1 | mRNA | 34988866 | 34991473 | 34988866 | ID=MS.gene073640.t1;Parent=MS.gene073640 |
| chr1.1 | exon | 34991326 | 34991473 | 34991326 | ID=MS.gene073640.t1.exon1;Parent=MS.gene073640.t1 |
| chr1.1 | CDS | 34991326 | 34991473 | 34991326 | ID=cds.MS.gene073640.t1;Parent=MS.gene073640.t1 |
| chr1.1 | exon | 34991188 | 34991215 | 34991188 | ID=MS.gene073640.t1.exon2;Parent=MS.gene073640.t1 |
| chr1.1 | CDS | 34991188 | 34991215 | 34991188 | ID=cds.MS.gene073640.t1;Parent=MS.gene073640.t1 |
| chr1.1 | exon | 34991001 | 34991119 | 34991001 | ID=MS.gene073640.t1.exon3;Parent=MS.gene073640.t1 |
| chr1.1 | CDS | 34991001 | 34991119 | 34991001 | ID=cds.MS.gene073640.t1;Parent=MS.gene073640.t1 |
| chr1.1 | exon | 34990179 | 34990271 | 34990179 | ID=MS.gene073640.t1.exon4;Parent=MS.gene073640.t1 |
| chr1.1 | CDS | 34990179 | 34990271 | 34990179 | ID=cds.MS.gene073640.t1;Parent=MS.gene073640.t1 |
| chr1.1 | exon | 34990022 | 34990105 | 34990022 | ID=MS.gene073640.t1.exon5;Parent=MS.gene073640.t1 |
| chr1.1 | CDS | 34990022 | 34990105 | 34990022 | ID=cds.MS.gene073640.t1;Parent=MS.gene073640.t1 |
| chr1.1 | exon | 34989748 | 34989938 | 34989748 | ID=MS.gene073640.t1.exon6;Parent=MS.gene073640.t1 |
| chr1.1 | CDS | 34989748 | 34989938 | 34989748 | ID=cds.MS.gene073640.t1;Parent=MS.gene073640.t1 |
| chr1.1 | exon | 34989622 | 34989667 | 34989622 | ID=MS.gene073640.t1.exon7;Parent=MS.gene073640.t1 |
| chr1.1 | CDS | 34989622 | 34989667 | 34989622 | ID=cds.MS.gene073640.t1;Parent=MS.gene073640.t1 |
| chr1.1 | exon | 34989084 | 34989166 | 34989084 | ID=MS.gene073640.t1.exon8;Parent=MS.gene073640.t1 |
| chr1.1 | CDS | 34989084 | 34989166 | 34989084 | ID=cds.MS.gene073640.t1;Parent=MS.gene073640.t1 |
| chr1.1 | exon | 34988866 | 34988991 | 34988866 | ID=MS.gene073640.t1.exon9;Parent=MS.gene073640.t1 |
| chr1.1 | CDS | 34988866 | 34988991 | 34988866 | ID=cds.MS.gene073640.t1;Parent=MS.gene073640.t1 |
| Gene Sequence |
| Protein sequence |
