Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69332.t1 | XP_013462263.1 | 99.3 | 287 | 2 | 0 | 15 | 301 | 47 | 333 | 4.30E-152 | 547.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69332.t1 | A0A072V4M6 | 99.3 | 287 | 2 | 0 | 15 | 301 | 47 | 333 | 3.1e-152 | 547.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene69332 | 0.836761 | 7.74E-57 | -1.69E-46 |
| MS.gene049217 | MS.gene69332 | 0.81745 | 3.28E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene69332 | 0.85538 | 6.56E-62 | -1.69E-46 |
| MS.gene049232 | MS.gene69332 | 0.861441 | 1.02E-63 | -1.69E-46 |
| MS.gene049285 | MS.gene69332 | 0.839299 | 1.72E-57 | -1.69E-46 |
| MS.gene049320 | MS.gene69332 | 0.828185 | 1.03E-54 | -1.69E-46 |
| MS.gene049627 | MS.gene69332 | 0.875195 | 3.73E-68 | -1.69E-46 |
| MS.gene049633 | MS.gene69332 | 0.832002 | 1.21E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene69332 | 0.818278 | 2.13E-52 | -1.69E-46 |
| MS.gene049865 | MS.gene69332 | 0.872617 | 2.77E-67 | -1.69E-46 |
| MS.gene05010 | MS.gene69332 | 0.85997 | 2.86E-63 | -1.69E-46 |
| MS.gene050163 | MS.gene69332 | 0.826544 | 2.56E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene69332 | 0.837977 | 3.78E-57 | -1.69E-46 |
| MS.gene050170 | MS.gene69332 | 0.871615 | 5.97E-67 | -1.69E-46 |
| MS.gene050323 | MS.gene69332 | 0.829857 | 4.07E-55 | -1.69E-46 |
| MS.gene050333 | MS.gene69332 | 0.812846 | 3.45E-51 | -1.69E-46 |
| MS.gene050496 | MS.gene69332 | 0.841456 | 4.70E-58 | -1.69E-46 |
| MS.gene050504 | MS.gene69332 | 0.865078 | 7.66E-65 | -1.69E-46 |
| MS.gene050518 | MS.gene69332 | 0.863006 | 3.39E-64 | -1.69E-46 |
| MS.gene050577 | MS.gene69332 | 0.842549 | 2.42E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene69332 | 0.842067 | 3.24E-58 | -1.69E-46 |
| MS.gene050675 | MS.gene69332 | 0.816644 | 4.97E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene69332 | 0.815895 | 7.31E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene69332 | 0.810534 | 1.10E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene69332 | 0.807802 | 4.23E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene69332 | 0.805131 | 1.55E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene69332 | 0.847014 | 1.51E-59 | -1.69E-46 |
| MS.gene050871 | MS.gene69332 | 0.846019 | 2.83E-59 | -1.69E-46 |
| MS.gene050876 | MS.gene69332 | 0.869029 | 4.20E-66 | -1.69E-46 |
| MS.gene05087 | MS.gene69332 | 0.885261 | 9.47E-72 | -1.69E-46 |
| MS.gene050904 | MS.gene69332 | 0.914359 | 2.10E-84 | -1.69E-46 |
| MS.gene050950 | MS.gene69332 | 0.810903 | 9.15E-51 | -1.69E-46 |
| MS.gene050986 | MS.gene69332 | 0.84572 | 3.40E-59 | -1.69E-46 |
| MS.gene051268 | MS.gene69332 | 0.833653 | 4.71E-56 | -1.69E-46 |
| MS.gene051317 | MS.gene69332 | 0.855164 | 7.58E-62 | -1.69E-46 |
| MS.gene052066 | MS.gene69332 | 0.804871 | 1.75E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene69332 | 0.830723 | 2.50E-55 | -1.69E-46 |
| MS.gene052482 | MS.gene69332 | 0.864563 | 1.11E-64 | -1.69E-46 |
| MS.gene052486 | MS.gene69332 | 0.879849 | 8.90E-70 | -1.69E-46 |
| MS.gene052503 | MS.gene69332 | 0.807608 | 4.65E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene69332 | 0.803352 | 3.63E-49 | -1.69E-46 |
| MS.gene052825 | MS.gene69332 | 0.805186 | 1.51E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene69332 | 0.861602 | 9.14E-64 | -1.69E-46 |
| MS.gene053083 | MS.gene69332 | -0.809499 | 1.84E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene69332 | 0.835124 | 2.01E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene69332 | 0.805867 | 1.08E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene69332 | 0.810691 | 1.02E-50 | -1.69E-46 |
| MS.gene053480 | MS.gene69332 | 0.815383 | 9.51E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene69332 | 0.81162 | 6.39E-51 | -1.69E-46 |
| MS.gene053633 | MS.gene69332 | 0.844123 | 9.18E-59 | -1.69E-46 |
| MS.gene053824 | MS.gene69332 | 0.821037 | 4.99E-53 | -1.69E-46 |
| MS.gene054408 | MS.gene69332 | 0.801355 | 9.36E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene69332 | 0.814075 | 1.85E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene69332 | 0.823709 | 1.20E-53 | -1.69E-46 |
| MS.gene054638 | MS.gene69332 | 0.843395 | 1.44E-58 | -1.69E-46 |
| MS.gene054642 | MS.gene69332 | 0.803718 | 3.05E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene69332 | 0.857144 | 1.99E-62 | -1.69E-46 |
| MS.gene054954 | MS.gene69332 | 0.851264 | 9.94E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene69332 | 0.840048 | 1.10E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene69332 | 0.834995 | 2.17E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene69332 | 0.839481 | 1.54E-57 | -1.69E-46 |
| MS.gene055634 | MS.gene69332 | 0.814623 | 1.40E-51 | -1.69E-46 |
| MS.gene055748 | MS.gene69332 | 0.832817 | 7.61E-56 | -1.69E-46 |
| MS.gene055750 | MS.gene69332 | 0.83118 | 1.93E-55 | -1.69E-46 |
| MS.gene055751 | MS.gene69332 | 0.845443 | 4.05E-59 | -1.69E-46 |
| MS.gene055776 | MS.gene69332 | 0.819517 | 1.11E-52 | -1.69E-46 |
| MS.gene055849 | MS.gene69332 | 0.812056 | 5.14E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene69332 | 0.883849 | 3.17E-71 | -1.69E-46 |
| MS.gene055941 | MS.gene69332 | 0.800904 | 1.16E-48 | -1.69E-46 |
| MS.gene056046 | MS.gene69332 | 0.815048 | 1.13E-51 | -1.69E-46 |
| MS.gene056409 | MS.gene69332 | 0.820846 | 5.53E-53 | -1.69E-46 |
| MS.gene056450 | MS.gene69332 | 0.839722 | 1.34E-57 | -1.69E-46 |
| MS.gene056504 | MS.gene69332 | 0.88459 | 1.68E-71 | -1.69E-46 |
| MS.gene056510 | MS.gene69332 | 0.867108 | 1.74E-65 | -1.69E-46 |
| MS.gene056549 | MS.gene69332 | 0.815627 | 8.39E-52 | -1.69E-46 |
| MS.gene056610 | MS.gene69332 | 0.824953 | 6.10E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene69332 | 0.821031 | 5.01E-53 | -1.69E-46 |
| MS.gene056692 | MS.gene69332 | 0.832357 | 9.90E-56 | -1.69E-46 |
| MS.gene057684 | MS.gene69332 | 0.806512 | 7.93E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene69332 | 0.832543 | 8.91E-56 | -1.69E-46 |
| MS.gene057831 | MS.gene69332 | 0.847885 | 8.71E-60 | -1.69E-46 |
| MS.gene057872 | MS.gene69332 | 0.878595 | 2.47E-69 | -1.69E-46 |
| MS.gene05787 | MS.gene69332 | 0.807848 | 4.14E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene69332 | 0.807622 | 4.62E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene69332 | -0.814048 | 1.88E-51 | -1.69E-46 |
| MS.gene058173 | MS.gene69332 | -0.805642 | 1.21E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene69332 | -0.812281 | 4.59E-51 | -1.69E-46 |
| MS.gene058335 | MS.gene69332 | 0.844059 | 9.56E-59 | -1.69E-46 |
| MS.gene05837 | MS.gene69332 | 0.847195 | 1.35E-59 | -1.69E-46 |
| MS.gene058419 | MS.gene69332 | 0.831034 | 2.10E-55 | -1.69E-46 |
| MS.gene058719 | MS.gene69332 | 0.841753 | 3.92E-58 | -1.69E-46 |
| MS.gene058773 | MS.gene69332 | 0.855791 | 4.98E-62 | -1.69E-46 |
| MS.gene059022 | MS.gene69332 | 0.854005 | 1.64E-61 | -1.69E-46 |
| MS.gene059023 | MS.gene69332 | 0.853711 | 2.00E-61 | -1.69E-46 |
| MS.gene05912 | MS.gene69332 | 0.865731 | 4.78E-65 | -1.69E-46 |
| MS.gene059526 | MS.gene69332 | -0.804493 | 2.10E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene69332 | 0.839332 | 1.69E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene69332 | 0.826115 | 3.24E-54 | -1.69E-46 |
| MS.gene059756 | MS.gene69332 | 0.807781 | 4.27E-50 | -1.69E-46 |
| MS.gene059801 | MS.gene69332 | 0.849191 | 3.79E-60 | -1.69E-46 |
| MS.gene059837 | MS.gene69332 | 0.851188 | 1.04E-60 | -1.69E-46 |
| MS.gene059865 | MS.gene69332 | 0.856195 | 3.79E-62 | -1.69E-46 |
| MS.gene05996 | MS.gene69332 | 0.817361 | 3.43E-52 | -1.69E-46 |
| MS.gene06000 | MS.gene69332 | 0.838519 | 2.74E-57 | -1.69E-46 |
| MS.gene060187 | MS.gene69332 | -0.832198 | 1.08E-55 | -1.69E-46 |
| MS.gene060339 | MS.gene69332 | 0.840689 | 7.48E-58 | -1.69E-46 |
| MS.gene060595 | MS.gene69332 | -0.873554 | 1.34E-67 | -1.69E-46 |
| MS.gene060703 | MS.gene69332 | 0.871844 | 5.01E-67 | -1.69E-46 |
| MS.gene060762 | MS.gene69332 | 0.873649 | 1.25E-67 | -1.69E-46 |
| MS.gene060778 | MS.gene69332 | 0.840905 | 6.56E-58 | -1.69E-46 |
| MS.gene06077 | MS.gene69332 | 0.889843 | 1.68E-73 | -1.69E-46 |
| MS.gene060982 | MS.gene69332 | 0.874995 | 4.37E-68 | -1.69E-46 |
| MS.gene061150 | MS.gene69332 | 0.80543 | 1.34E-49 | -1.69E-46 |
| MS.gene061226 | MS.gene69332 | -0.800267 | 1.56E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69332.t1 | MTR_3g115240 | 99.303 | 287 | 2 | 0 | 15 | 301 | 47 | 333 | 0.0 | 585 |
| MS.gene69332.t1 | MTR_6g008890 | 27.027 | 259 | 140 | 6 | 76 | 287 | 98 | 354 | 3.56e-18 | 84.0 |
| MS.gene69332.t1 | MTR_4g071610 | 27.027 | 259 | 140 | 6 | 76 | 287 | 98 | 354 | 3.56e-18 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69332.t1 | AT1G63610 | 80.989 | 263 | 48 | 2 | 39 | 299 | 76 | 338 | 2.91e-147 | 417 |
| MS.gene69332.t1 | AT1G63610 | 80.110 | 181 | 34 | 2 | 39 | 217 | 76 | 256 | 8.04e-93 | 276 |
| MS.gene69332.t1 | AT1G63610 | 78.505 | 107 | 22 | 1 | 39 | 144 | 76 | 182 | 4.51e-54 | 174 |
| MS.gene69332.t1 | AT2G14910 | 25.402 | 311 | 168 | 7 | 34 | 287 | 71 | 374 | 6.02e-23 | 97.8 |
| MS.gene69332.t1 | AT5G14970 | 24.188 | 277 | 169 | 5 | 50 | 287 | 79 | 353 | 1.59e-21 | 93.6 |
| MS.gene69332.t1 | AT2G14910 | 27.542 | 236 | 139 | 5 | 34 | 244 | 71 | 299 | 4.98e-19 | 86.7 |
Find 60 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAGAAAGTGTTCCTTTA+TGG | 0.117262 | 3.3:-94019451 | None:intergenic |
| GACCGTGCAGCCGGAATTTA+TGG | 0.149781 | 3.3:+94019805 | MS.gene69332:CDS |
| AACTTGGAAAACTGCTTTAT+TGG | 0.187386 | 3.3:+94022589 | MS.gene69332:CDS |
| CAGAGTGCCGTTAGGGGATT+TGG | 0.219495 | 3.3:-94019507 | None:intergenic |
| TCCGAGGCTCAAGAGATTTC+AGG | 0.291456 | 3.3:-94021355 | None:intergenic |
| GGCAATTCAGCCAGCTTTGC+AGG | 0.291964 | 3.3:-94022681 | None:intergenic |
| TCCGGACGTGCAAGATAAAA+AGG | 0.320165 | 3.3:+94020827 | MS.gene69332:CDS |
| TTTGGAACTGCAAGAAAGTT+TGG | 0.323667 | 3.3:+94020791 | MS.gene69332:CDS |
| ATTAGGTGGAACAACATTTC+TGG | 0.347794 | 3.3:+94021218 | MS.gene69332:CDS |
| GGGACACAAAAGAATGTTTC+AGG | 0.353665 | 3.3:+94021188 | MS.gene69332:CDS |
| TCCAGAAATTCAAACCATAA+AGG | 0.354255 | 3.3:+94019437 | MS.gene69332:intron |
| ATGTTTCAGGTGAAGTCATT+AGG | 0.366658 | 3.3:+94021201 | MS.gene69332:CDS |
| ACAAACAATTCCATAAATTC+CGG | 0.373472 | 3.3:-94019815 | None:intergenic |
| TGTGTCCCAGGTGCATAGTC+TGG | 0.375806 | 3.3:-94021173 | None:intergenic |
| GAGCAGAAGAGAAATCTTAC+TGG | 0.381488 | 3.3:+94019772 | MS.gene69332:CDS |
| TTTGGAACAAGTTGCCCTTC+CGG | 0.390092 | 3.3:+94020809 | MS.gene69332:CDS |
| AAAACTGCTTTATTGGTTGA+TGG | 0.399137 | 3.3:+94022596 | MS.gene69332:CDS |
| CTTTATTGGTTGATGGTGGT+TGG | 0.401910 | 3.3:+94022603 | MS.gene69332:CDS |
| TAGAAATGCACAATACCGTT+TGG | 0.412122 | 3.3:+94020773 | MS.gene69332:CDS |
| GAGACTAGTGCATCCGAACT+TGG | 0.446534 | 3.3:+94022573 | MS.gene69332:CDS |
| TTTATTGGTTGATGGTGGTT+GGG | 0.446688 | 3.3:+94022604 | MS.gene69332:CDS |
| TCTTGAGCCTCGGAATTTGA+AGG | 0.450089 | 3.3:+94021364 | MS.gene69332:CDS |
| CATTTCTGGACCTGAGAGAA+TGG | 0.452153 | 3.3:+94021232 | MS.gene69332:CDS |
| ACTTGGAACTCCTGCAAAGC+TGG | 0.466951 | 3.3:+94022671 | MS.gene69332:CDS |
| CATAAGCTGTGCAAGGTTCT+CGG | 0.467098 | 3.3:-94020721 | None:intergenic |
| AAAAGTACCAGAGTGCCGTT+AGG | 0.471684 | 3.3:-94019515 | None:intergenic |
| CAATGCACAAAATGAACTGT+TGG | 0.481591 | 3.3:+94021328 | MS.gene69332:CDS |
| AACTTTCTTGCAGTTCCAAA+CGG | 0.487921 | 3.3:-94020788 | None:intergenic |
| TGCAGATCCTACTCAAATGA+AGG | 0.495494 | 3.3:+94021844 | MS.gene69332:CDS |
| CAGACGGTGACAAATATGAT+TGG | 0.500013 | 3.3:+94020001 | MS.gene69332:CDS |
| AAGCTGGCTGAATTGCCGCC+AGG | 0.504319 | 3.3:+94022687 | MS.gene69332:CDS |
| TAGGATTTAACTAGTAGTGC+TGG | 0.507226 | 3.3:+94021770 | MS.gene69332:intron |
| TACATTTATAAAGCGCCTAC+TGG | 0.507895 | 3.3:+94021817 | MS.gene69332:CDS |
| AAAGTACCAGAGTGCCGTTA+GGG | 0.507908 | 3.3:-94019514 | None:intergenic |
| TTCGTTATATGAAGATGAAG+AGG | 0.510857 | 3.3:+94017963 | None:intergenic |
| ACCTGAAATCTCTTGAGCCT+CGG | 0.512343 | 3.3:+94021354 | MS.gene69332:CDS |
| CATTGAAGTTCGTTATGACA+TGG | 0.518591 | 3.3:+94022641 | MS.gene69332:CDS |
| TATGACATGGAAAGAGTACT+TGG | 0.520400 | 3.3:+94022654 | MS.gene69332:CDS |
| AGACAACACGTTACCGGTGG+AGG | 0.537586 | 3.3:-94019848 | None:intergenic |
| CAAATCCCCTAACGGCACTC+TGG | 0.539235 | 3.3:+94019508 | MS.gene69332:CDS |
| GATATTCCAGACTATGCACC+TGG | 0.544069 | 3.3:+94021167 | MS.gene69332:CDS |
| ATGTACAGTGTCATGATGAC+TGG | 0.544482 | 3.3:+94020741 | MS.gene69332:CDS |
| GTATGTCAAGACCGTGCAGC+CGG | 0.545800 | 3.3:+94019796 | MS.gene69332:CDS |
| GAGGAGTTAAATCGTCAAGT+TGG | 0.554733 | 3.3:+94021293 | MS.gene69332:CDS |
| TTCCATAAATTCCGGCTGCA+CGG | 0.558125 | 3.3:-94019807 | None:intergenic |
| AGGCAAACCTTCATTTGAGT+AGG | 0.567766 | 3.3:-94021851 | None:intergenic |
| TCGTTATATGAAGATGAAGA+GGG | 0.577206 | 3.3:+94017964 | None:intergenic |
| TTTAACTAGTAGTGCTGGAG+AGG | 0.582109 | 3.3:+94021775 | MS.gene69332:CDS |
| GTACATTGAAATACTTGAAG+CGG | 0.584560 | 3.3:+94021265 | MS.gene69332:CDS |
| TTTATCTTGCACGTCCGGAA+GGG | 0.586926 | 3.3:-94020823 | None:intergenic |
| CACTGTACATAAGCTGTGCA+AGG | 0.614814 | 3.3:-94020728 | None:intergenic |
| TTTCAGGTGAAGTCATTAGG+TGG | 0.620061 | 3.3:+94021204 | MS.gene69332:CDS |
| AAATCAACCTTCAAATTCCG+AGG | 0.621737 | 3.3:-94021371 | None:intergenic |
| ACTGCTTTATTGGTTGATGG+TGG | 0.623526 | 3.3:+94022599 | MS.gene69332:CDS |
| AATACTTGAAGCGGAGATCG+AGG | 0.627103 | 3.3:+94021274 | MS.gene69332:CDS |
| TAGGATCTGCAACAGCCAGT+AGG | 0.630746 | 3.3:-94021832 | None:intergenic |
| GGTGAATCCAAATCCCCTAA+CGG | 0.646624 | 3.3:+94019500 | MS.gene69332:CDS |
| AAGTACCAGAGTGCCGTTAG+GGG | 0.671487 | 3.3:-94019513 | None:intergenic |
| TGTGGATGCTATGAGACAGA+CGG | 0.739945 | 3.3:+94019985 | MS.gene69332:CDS |
| ATATTCCAGACTATGCACCT+GGG | 0.741358 | 3.3:+94021168 | MS.gene69332:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTATATCGATAAAAAAA+AGG | - | chr3.3:94018726-94018745 | None:intergenic | 10.0% |
| !! | ATATTTGCATATTAAAAAAA+TGG | + | chr3.3:94018917-94018936 | MS.gene69332:intron | 10.0% |
| !!! | TATTTTAGTTAACATTAATT+GGG | - | chr3.3:94018658-94018677 | None:intergenic | 10.0% |
| !!! | TGTTTTTTTTTTAAGAAAAA+TGG | - | chr3.3:94018338-94018357 | None:intergenic | 10.0% |
| !!! | TTATTTTAGTTAACATTAAT+TGG | - | chr3.3:94018659-94018678 | None:intergenic | 10.0% |
| !!! | TTTTTAATTTTTTTGACAAA+TGG | - | chr3.3:94018375-94018394 | None:intergenic | 10.0% |
| !! | AAAAACGAAAAATAAGTTAA+GGG | + | chr3.3:94018196-94018215 | MS.gene69332:intron | 15.0% |
| !! | ATATAATCTTACAATATTGT+AGG | + | chr3.3:94021145-94021164 | MS.gene69332:intron | 15.0% |
| !! | ATCATTAAATCATAAAACAA+CGG | - | chr3.3:94020110-94020129 | None:intergenic | 15.0% |
| !! | ATTGTTATAGAAAAAAATTG+AGG | - | chr3.3:94020037-94020056 | None:intergenic | 15.0% |
| !! | ATTTCTTTCTGTTATTAATT+AGG | + | chr3.3:94019961-94019980 | MS.gene69332:intron | 15.0% |
| !! | GATGTTTGTATTTATTATTT+AGG | - | chr3.3:94020506-94020525 | None:intergenic | 15.0% |
| !! | TAAAAACGAAAAATAAGTTA+AGG | + | chr3.3:94018195-94018214 | MS.gene69332:intron | 15.0% |
| !! | TCAAAAATTAAGATATGATA+CGG | - | chr3.3:94018996-94019015 | None:intergenic | 15.0% |
| !! | TTGTTATAGAAAAAAATTGA+GGG | - | chr3.3:94020036-94020055 | None:intergenic | 15.0% |
| !!! | ATTTCTTCAAATTGATTTAT+GGG | + | chr3.3:94022426-94022445 | MS.gene69332:intron | 15.0% |
| !!! | CTTATTTTTCGTTTTTAATT+TGG | - | chr3.3:94018192-94018211 | None:intergenic | 15.0% |
| !!! | TTAATTTTCTCCTTAAATTA+AGG | + | chr3.3:94022190-94022209 | MS.gene69332:intron | 15.0% |
| !!! | TTGTTTTATGATTTAATGAT+AGG | + | chr3.3:94020110-94020129 | MS.gene69332:intron | 15.0% |
| !! | AATGTTAACCCAAATAATAA+TGG | - | chr3.3:94021990-94022009 | None:intergenic | 20.0% |
| !! | AATTTAAGAACATTGTTTGT+TGG | + | chr3.3:94021705-94021724 | MS.gene69332:intron | 20.0% |
| !! | ACAGAAATTATCCAATTAAA+TGG | - | chr3.3:94018430-94018449 | None:intergenic | 20.0% |
| !! | ACCTGAATAAAAAAACAAAA+TGG | - | chr3.3:94020699-94020718 | None:intergenic | 20.0% |
| !! | AGTAAACAACATAAGATTTA+TGG | + | chr3.3:94018135-94018154 | MS.gene69332:intron | 20.0% |
| !! | AGTCTATAAAAAATCAGAAT+TGG | - | chr3.3:94022544-94022563 | None:intergenic | 20.0% |
| !! | GTAAACAACATAAGATTTAT+GGG | + | chr3.3:94018136-94018155 | MS.gene69332:intron | 20.0% |
| !! | GTTAACATTGAATTTAATGT+TGG | + | chr3.3:94022001-94022020 | MS.gene69332:intron | 20.0% |
| !! | TAAGATAGGAAACTAAATAT+TGG | + | chr3.3:94022278-94022297 | MS.gene69332:intron | 20.0% |
| !! | TCATATCATATCATGTAAAT+AGG | - | chr3.3:94020464-94020483 | None:intergenic | 20.0% |
| !! | TGTTATAGAAAAAAATTGAG+GGG | - | chr3.3:94020035-94020054 | None:intergenic | 20.0% |
| !! | TTGTTACAATGGAAAATAAA+AGG | + | chr3.3:94022219-94022238 | MS.gene69332:intron | 20.0% |
| !!! | ACAATTTTCTCCTTAATTTA+AGG | - | chr3.3:94022203-94022222 | None:intergenic | 20.0% |
| !!! | ACCATTTTGTTTTTTTATTC+AGG | + | chr3.3:94020695-94020714 | MS.gene69332:intron | 20.0% |
| !!! | ATTAAGCCTTTATTTTATCA+TGG | + | chr3.3:94018231-94018250 | MS.gene69332:intron | 20.0% |
| !!! | CTTTTTTATTAAATGAGGAA+AGG | - | chr3.3:94022360-94022379 | None:intergenic | 20.0% |
| !!! | GATTTCTTCAAATTGATTTA+TGG | + | chr3.3:94022425-94022444 | MS.gene69332:intron | 20.0% |
| !!! | GTTGGAATTGTATTATTTTT+AGG | + | chr3.3:94022019-94022038 | MS.gene69332:intron | 20.0% |
| !!! | TCTTATGTTGTTTACTATTT+TGG | - | chr3.3:94018131-94018150 | None:intergenic | 20.0% |
| !!! | TGTGATCAATTTTGAAAATA+CGG | + | chr3.3:94021500-94021519 | MS.gene69332:intron | 20.0% |
| !!! | TTTTTTTGACAAATGGTAAA+TGG | - | chr3.3:94018368-94018387 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCCTTTTTGCAAA+TGG | - | chr3.3:94018262-94018281 | None:intergenic | 20.0% |
| ! | AAAGGCTATTGAAAAACAAT+AGG | + | chr3.3:94022109-94022128 | MS.gene69332:intron | 25.0% |
| ! | AACATTAATTGGGAAATATC+TGG | - | chr3.3:94018648-94018667 | None:intergenic | 25.0% |
| ! | AATGAACTTATATCAGTTCT+TGG | - | chr3.3:94020441-94020460 | None:intergenic | 25.0% |
| ! | AATTGAGACACTTTATAGTT+AGG | + | chr3.3:94018163-94018182 | MS.gene69332:intron | 25.0% |
| ! | AATTGCAACTGTAAGATTAT+CGG | + | chr3.3:94020054-94020073 | MS.gene69332:intron | 25.0% |
| ! | AATTTGAAGAAATCTAGTTG+TGG | - | chr3.3:94022419-94022438 | None:intergenic | 25.0% |
| ! | ACAAACAATTCCATAAATTC+CGG | - | chr3.3:94019818-94019837 | None:intergenic | 25.0% |
| ! | ACATAAAACTCTTCATTCTT+AGG | - | chr3.3:94021006-94021025 | None:intergenic | 25.0% |
| ! | ACATTAATTGGGAAATATCT+GGG | - | chr3.3:94018647-94018666 | None:intergenic | 25.0% |
| ! | AGTGTTATACTATATCCAAA+AGG | - | chr3.3:94018764-94018783 | None:intergenic | 25.0% |
| ! | ATCCAATTAAATGGAAACAT+TGG | - | chr3.3:94018421-94018440 | None:intergenic | 25.0% |
| ! | ATTGAGACACTTTATAGTTA+GGG | + | chr3.3:94018164-94018183 | MS.gene69332:intron | 25.0% |
| ! | GAGATGTAATTCTAGATATT+TGG | - | chr3.3:94021583-94021602 | None:intergenic | 25.0% |
| ! | GTGAATCCATGATAAAATAA+AGG | - | chr3.3:94018240-94018259 | None:intergenic | 25.0% |
| ! | GTTAAATCCTACATGAAAAA+AGG | - | chr3.3:94021761-94021780 | None:intergenic | 25.0% |
| ! | GTTATAGAAAAAAATTGAGG+GGG | - | chr3.3:94020034-94020053 | None:intergenic | 25.0% |
| ! | TAAATGGAAACATTGGTAAA+TGG | - | chr3.3:94018414-94018433 | None:intergenic | 25.0% |
| ! | TAAGGAGAAAATTGTTACAA+TGG | + | chr3.3:94022208-94022227 | MS.gene69332:intron | 25.0% |
| ! | TAATAGTCTAACTGACTATA+GGG | + | chr3.3:94022385-94022404 | MS.gene69332:intron | 25.0% |
| ! | TACCAATGTTTCCATTTAAT+TGG | + | chr3.3:94018416-94018435 | MS.gene69332:intron | 25.0% |
| ! | TATTGGAATATTTCCAATAG+AGG | + | chr3.3:94022295-94022314 | MS.gene69332:intron | 25.0% |
| ! | TCTGTTCACCATTATTATTT+GGG | + | chr3.3:94021979-94021998 | MS.gene69332:intron | 25.0% |
| ! | TTATATATATAACCGTACGT+GGG | + | chr3.3:94019156-94019175 | MS.gene69332:intron | 25.0% |
| ! | TTTCAGTGCAAGATAATTAT+CGG | - | chr3.3:94018620-94018639 | None:intergenic | 25.0% |
| !! | AAAATTAAACAAGTACCGTA+CGG | - | chr3.3:94020261-94020280 | None:intergenic | 25.0% |
| !! | AACACTAATGATTCTCTTTT+TGG | + | chr3.3:94018778-94018797 | MS.gene69332:intron | 25.0% |
| !! | AACTATAAAGTGTCTCAATT+TGG | - | chr3.3:94018163-94018182 | None:intergenic | 25.0% |
| !! | ACACTAATGATTCTCTTTTT+GGG | + | chr3.3:94018779-94018798 | MS.gene69332:intron | 25.0% |
| !! | AGAGAAAGTATAAAGCAAAA+AGG | - | chr3.3:94020652-94020671 | None:intergenic | 25.0% |
| !! | ATTTTTCCGTATCATTGTAT+CGG | + | chr3.3:94019017-94019036 | MS.gene69332:intron | 25.0% |
| !! | TATTTAGGATTGCTGTATAT+GGG | - | chr3.3:94020491-94020510 | None:intergenic | 25.0% |
| !! | TGTGTTTTATGTGTTTATCA+TGG | + | chr3.3:94022047-94022066 | MS.gene69332:intron | 25.0% |
| !! | TTATTTAGGATTGCTGTATA+TGG | - | chr3.3:94020492-94020511 | None:intergenic | 25.0% |
| !! | TTCCTATCTTATTGTTTTCT+AGG | - | chr3.3:94022269-94022288 | None:intergenic | 25.0% |
| !! | TTCTGTTATTAATTAGGTTG+TGG | + | chr3.3:94019967-94019986 | MS.gene69332:intron | 25.0% |
| !!! | AGTTTTATGTCTTGTGAATT+TGG | + | chr3.3:94021016-94021035 | MS.gene69332:intron | 25.0% |
| !!! | CAGTGCTTTTTTATTAAATG+AGG | - | chr3.3:94022365-94022384 | None:intergenic | 25.0% |
| !!! | GTGATCAATTTTGAAAATAC+GGG | + | chr3.3:94021501-94021520 | MS.gene69332:intron | 25.0% |
| AAAAACTAGTTGAAGAGAGA+GGG | - | chr3.3:94020086-94020105 | None:intergenic | 30.0% | |
| AACAATCACATTGTAAAGTG+TGG | + | chr3.3:94019132-94019151 | MS.gene69332:intron | 30.0% | |
| AACTTGGAAAACTGCTTTAT+TGG | + | chr3.3:94022589-94022608 | MS.gene69332:CDS | 30.0% | |
| AAGTATTTGGATAACTCCTA+GGG | + | chr3.3:94020903-94020922 | MS.gene69332:intron | 30.0% | |
| AATCCTACATGAAAAAAGGA+AGG | - | chr3.3:94021757-94021776 | None:intergenic | 30.0% | |
| AATGATACTACTGACAGTAA+TGG | - | chr3.3:94022499-94022518 | None:intergenic | 30.0% | |
| ACAATCACATTGTAAAGTGT+GGG | + | chr3.3:94019133-94019152 | MS.gene69332:intron | 30.0% | |
| ACGATAAAACTGTACCAAAA+AGG | + | chr3.3:94020318-94020337 | MS.gene69332:intron | 30.0% | |
| ACTATGTGTGATTGTTTGAT+CGG | + | chr3.3:94022449-94022468 | MS.gene69332:intron | 30.0% | |
| AGAAATCACATTCACTAAGA+TGG | - | chr3.3:94019947-94019966 | None:intergenic | 30.0% | |
| CTCTGTTCACCATTATTATT+TGG | + | chr3.3:94021978-94021997 | MS.gene69332:intron | 30.0% | |
| GAAGAAGATAGTATGAATTG+AGG | - | chr3.3:94019350-94019369 | None:intergenic | 30.0% | |
| GTAATAGTCTAACTGACTAT+AGG | + | chr3.3:94022384-94022403 | MS.gene69332:intron | 30.0% | |
| GTACATTGAAATACTTGAAG+CGG | + | chr3.3:94021265-94021284 | MS.gene69332:CDS | 30.0% | |
| GTTATATATATAACCGTACG+TGG | + | chr3.3:94019155-94019174 | MS.gene69332:intron | 30.0% | |
| TAAAAACTAGTTGAAGAGAG+AGG | - | chr3.3:94020087-94020106 | None:intergenic | 30.0% | |
| TAAAGGCTTAATACATCGTT+TGG | - | chr3.3:94018223-94018242 | None:intergenic | 30.0% | |
| TAATGAAGTCTCCTTAAGAA+CGG | - | chr3.3:94021914-94021933 | None:intergenic | 30.0% | |
| TAATTATCTTGCACTGAAAC+AGG | + | chr3.3:94018621-94018640 | MS.gene69332:intron | 30.0% | |
| TACAATGTGATTGTTAGTGA+GGG | - | chr3.3:94019127-94019146 | None:intergenic | 30.0% | |
| TCCAGAAATTCAAACCATAA+AGG | + | chr3.3:94019437-94019456 | MS.gene69332:intron | 30.0% | |
| TCCTTTATGGTTTGAATTTC+TGG | - | chr3.3:94019441-94019460 | None:intergenic | 30.0% | |
| TGAAAAAAGGAAGGTTACTA+TGG | - | chr3.3:94021748-94021767 | None:intergenic | 30.0% | |
| TGCCTAGAAAACAATAAGAT+AGG | + | chr3.3:94022264-94022283 | MS.gene69332:intron | 30.0% | |
| TTACAATGTGATTGTTAGTG+AGG | - | chr3.3:94019128-94019147 | None:intergenic | 30.0% | |
| TTGAGACACTTTATAGTTAG+GGG | + | chr3.3:94018165-94018184 | MS.gene69332:intron | 30.0% | |
| ! | AAAACTGCTTTATTGGTTGA+TGG | + | chr3.3:94022596-94022615 | MS.gene69332:CDS | 30.0% |
| ! | AAATTAAACAAGTACCGTAC+GGG | - | chr3.3:94020260-94020279 | None:intergenic | 30.0% |
| ! | AACACTAACAATGTTCCTTT+TGG | + | chr3.3:94018746-94018765 | MS.gene69332:intron | 30.0% |
| ! | ATAAAGCAGTTTTCCAAGTT+CGG | - | chr3.3:94022589-94022608 | None:intergenic | 30.0% |
| ! | ATTTCTCTTCCTTGTCTTTT+TGG | + | chr3.3:94020856-94020875 | MS.gene69332:intron | 30.0% |
| ! | CAGATTTTGCAAAATACTAC+CGG | + | chr3.3:94018099-94018118 | MS.gene69332:intron | 30.0% |
| ! | CATTTAAGATTGGTGATCAA+CGG | - | chr3.3:94018060-94018079 | None:intergenic | 30.0% |
| ! | GTTCTTAAATTTTAAGCGCA+GGG | - | chr3.3:94021696-94021715 | None:intergenic | 30.0% |
| ! | GTTTTATGTGTTTATCATGG+AGG | + | chr3.3:94022050-94022069 | MS.gene69332:intron | 30.0% |
| ! | TCAGACGTTATTGAAGTATT+TGG | + | chr3.3:94020890-94020909 | MS.gene69332:intron | 30.0% |
| ! | TGACACATGTCATTTAAGAT+TGG | - | chr3.3:94018070-94018089 | None:intergenic | 30.0% |
| ! | TGTTCTTAAATTTTAAGCGC+AGG | - | chr3.3:94021697-94021716 | None:intergenic | 30.0% |
| ! | TTGTTGGGTATATTAGTTTC+AGG | + | chr3.3:94020980-94020999 | MS.gene69332:intron | 30.0% |
| ! | TTTCTCTTCCTTGTCTTTTT+GGG | + | chr3.3:94020857-94020876 | MS.gene69332:intron | 30.0% |
| !! | CATAATGTTGCTTTAGCAAT+TGG | - | chr3.3:94020600-94020619 | None:intergenic | 30.0% |
| !! | TGAAAGAAAGTGTTCCTTTA+TGG | - | chr3.3:94019454-94019473 | None:intergenic | 30.0% |
| !!! | AGCATTGATGTGTTCTTTTT+TGG | + | chr3.3:94018692-94018711 | MS.gene69332:intron | 30.0% |
| !!! | TAACCTTCCTTTTTTCATGT+AGG | + | chr3.3:94021751-94021770 | MS.gene69332:intron | 30.0% |
| !!! | TGTAATGACTTTTTTGCTTG+TGG | + | chr3.3:94020546-94020565 | MS.gene69332:intron | 30.0% |
| AAAACCTCATTGCTGCTAAA+TGG | + | chr3.3:94021045-94021064 | MS.gene69332:intron | 35.0% | |
| AAACTGTACCAAAAAGGATG+CGG | + | chr3.3:94020324-94020343 | MS.gene69332:intron | 35.0% | |
| AAATCAACCTTCAAATTCCG+AGG | - | chr3.3:94021374-94021393 | None:intergenic | 35.0% | |
| AACACCATATTAAACCTACC+TGG | - | chr3.3:94021615-94021634 | None:intergenic | 35.0% | |
| AACGTAATTCCCATGGAATA+GGG | + | chr3.3:94019610-94019629 | MS.gene69332:intron | 35.0% | |
| AACTTTCTTGCAGTTCCAAA+CGG | - | chr3.3:94020791-94020810 | None:intergenic | 35.0% | |
| AATAGGGCAAGTGTAGAATA+GGG | + | chr3.3:94019626-94019645 | MS.gene69332:intron | 35.0% | |
| AATCGATCAACTAACAGTGT+CGG | - | chr3.3:94019883-94019902 | None:intergenic | 35.0% | |
| AATGAAGTCTCCTTAAGAAC+GGG | - | chr3.3:94021913-94021932 | None:intergenic | 35.0% | |
| ATAACAAGACAACACGTTAC+CGG | - | chr3.3:94019857-94019876 | None:intergenic | 35.0% | |
| ATTAGGTGGAACAACATTTC+TGG | + | chr3.3:94021218-94021237 | MS.gene69332:CDS | 35.0% | |
| CAATGCACAAAATGAACTGT+TGG | + | chr3.3:94021328-94021347 | MS.gene69332:CDS | 35.0% | |
| CACATAATCCCAAAAAGACA+AGG | - | chr3.3:94020868-94020887 | None:intergenic | 35.0% | |
| CATTGAAGTTCGTTATGACA+TGG | + | chr3.3:94022641-94022660 | MS.gene69332:CDS | 35.0% | |
| CTATGTGTGATTGTTTGATC+GGG | + | chr3.3:94022450-94022469 | MS.gene69332:intron | 35.0% | |
| CTCGTCAATTGAGATAGTAA+GGG | - | chr3.3:94022321-94022340 | None:intergenic | 35.0% | |
| CTTTCATGTACTTTCCAATC+AGG | - | chr3.3:94022093-94022112 | None:intergenic | 35.0% | |
| GAACTCTTATGTTACCTGAT+TGG | + | chr3.3:94022076-94022095 | MS.gene69332:intron | 35.0% | |
| GAACTTATATCAGTTCTTGG+TGG | - | chr3.3:94020438-94020457 | None:intergenic | 35.0% | |
| GAAGGCAATTAGAGATATTG+AGG | - | chr3.3:94021874-94021893 | None:intergenic | 35.0% | |
| GGTTATGATAGCTAATCTCT+TGG | + | chr3.3:94020148-94020167 | MS.gene69332:intron | 35.0% | |
| TAGAAATGCACAATACCGTT+TGG | + | chr3.3:94020773-94020792 | MS.gene69332:CDS | 35.0% | |
| TAGGATTTAACTAGTAGTGC+TGG | + | chr3.3:94021770-94021789 | MS.gene69332:intron | 35.0% | |
| TATGTGTGATTGTTTGATCG+GGG | + | chr3.3:94022451-94022470 | MS.gene69332:intron | 35.0% | |
| TCAAGCATCCAAAAATGATG+CGG | + | chr3.3:94019478-94019497 | MS.gene69332:CDS | 35.0% | |
| TCACACTGAAATAAGAAGCA+TGG | - | chr3.3:94020675-94020694 | None:intergenic | 35.0% | |
| TCACTATAAAAACCAGCCTT+GGG | - | chr3.3:94022162-94022181 | None:intergenic | 35.0% | |
| TCTCGTCAATTGAGATAGTA+AGG | - | chr3.3:94022322-94022341 | None:intergenic | 35.0% | |
| TGGATTCACCATTTGCAAAA+AGG | + | chr3.3:94018251-94018270 | MS.gene69332:intron | 35.0% | |
| TTATTTCCCAACTTTCTCTG+CGG | + | chr3.3:94020199-94020218 | MS.gene69332:intron | 35.0% | |
| TTGAAGTGGGAAGTAAAACA+AGG | + | chr3.3:94019229-94019248 | MS.gene69332:intron | 35.0% | |
| ! | AAATTTTAAGCGCAGGGAAT+GGG | - | chr3.3:94021690-94021709 | None:intergenic | 35.0% |
| ! | AATTAAACAAGTACCGTACG+GGG | - | chr3.3:94020259-94020278 | None:intergenic | 35.0% |
| ! | ATGGCTGTGACATTTTCTTT+TGG | + | chr3.3:94021064-94021083 | MS.gene69332:intron | 35.0% |
| ! | ATGTTTCAGGTGAAGTCATT+AGG | + | chr3.3:94021201-94021220 | MS.gene69332:CDS | 35.0% |
| ! | CTGATTGGAAAGTACATGAA+AGG | + | chr3.3:94022091-94022110 | MS.gene69332:intron | 35.0% |
| ! | GAAGTATTTGGATAACTCCT+AGG | + | chr3.3:94020902-94020921 | MS.gene69332:intron | 35.0% |
| ! | TAAATTTTAAGCGCAGGGAA+TGG | - | chr3.3:94021691-94021710 | None:intergenic | 35.0% |
| ! | TACAGACTAAAGCATTCACT+TGG | - | chr3.3:94021114-94021133 | None:intergenic | 35.0% |
| ! | TACATTTATAAAGCGCCTAC+TGG | + | chr3.3:94021817-94021836 | MS.gene69332:CDS | 35.0% |
| ! | TTTGGAACTGCAAGAAAGTT+TGG | + | chr3.3:94020791-94020810 | MS.gene69332:CDS | 35.0% |
| !! | TATGACATGGAAAGAGTACT+TGG | + | chr3.3:94022654-94022673 | MS.gene69332:CDS | 35.0% |
| !! | TTTATTGGTTGATGGTGGTT+GGG | + | chr3.3:94022604-94022623 | MS.gene69332:CDS | 35.0% |
| !! | TTTTTAGCATCCATTCTCTC+AGG | - | chr3.3:94021245-94021264 | None:intergenic | 35.0% |
| !!! | CTTGTCTTTTTGGGATTATG+TGG | + | chr3.3:94020866-94020885 | MS.gene69332:intron | 35.0% |
| !!! | TTTACTATTTTGGTCCTCTC+CGG | - | chr3.3:94018121-94018140 | None:intergenic | 35.0% |
| AAAGCAAGCATAGCATACCA+TGG | - | chr3.3:94018027-94018046 | None:intergenic | 40.0% | |
| AACTGTACCAAAAAGGATGC+GGG | + | chr3.3:94020325-94020344 | MS.gene69332:intron | 40.0% | |
| ACAGTGAACTATGCTTTGTG+CGG | - | chr3.3:94019255-94019274 | None:intergenic | 40.0% | |
| ACTTGTGAACGTAATTCCCA+TGG | + | chr3.3:94019603-94019622 | MS.gene69332:intron | 40.0% | |
| AGCACCAGGTAGGTTTAATA+TGG | + | chr3.3:94021608-94021627 | MS.gene69332:intron | 40.0% | |
| AGGCAAACCTTCATTTGAGT+AGG | - | chr3.3:94021854-94021873 | None:intergenic | 40.0% | |
| AGTAATGGCAAGCAAAGAGA+AGG | - | chr3.3:94022484-94022503 | None:intergenic | 40.0% | |
| ATACTCTCCTGATACGTATC+GGG | - | chr3.3:94018528-94018547 | None:intergenic | 40.0% | |
| ATACTCTCGTGATACGTATC+GGG | - | chr3.3:94018597-94018616 | None:intergenic | 40.0% | |
| ATATTCCAGACTATGCACCT+GGG | + | chr3.3:94021168-94021187 | MS.gene69332:CDS | 40.0% | |
| ATGAATTGAGGTCTGAGTGA+GGG | - | chr3.3:94019338-94019357 | None:intergenic | 40.0% | |
| ATGTACAGTGTCATGATGAC+TGG | + | chr3.3:94020741-94020760 | MS.gene69332:CDS | 40.0% | |
| CAACATTATGCCATCTAGCT+GGG | + | chr3.3:94020610-94020629 | MS.gene69332:intron | 40.0% | |
| CAAGCATCCAAAAATGATGC+GGG | + | chr3.3:94019479-94019498 | MS.gene69332:CDS | 40.0% | |
| CAGACGGTGACAAATATGAT+TGG | + | chr3.3:94020001-94020020 | MS.gene69332:CDS | 40.0% | |
| CTAATTTCCTTTGTGTGTCG+TGG | + | chr3.3:94020933-94020952 | MS.gene69332:intron | 40.0% | |
| CTCACTATAAAAACCAGCCT+TGG | - | chr3.3:94022163-94022182 | None:intergenic | 40.0% | |
| CTGGAAAAAGCAATTGACGA+AGG | - | chr3.3:94019422-94019441 | None:intergenic | 40.0% | |
| GAACGTAATTCCCATGGAAT+AGG | + | chr3.3:94019609-94019628 | MS.gene69332:intron | 40.0% | |
| GAAGCCTCGATACTTCAAAT+TGG | + | chr3.3:94018450-94018469 | MS.gene69332:intron | 40.0% | |
| GAATAGGGCAAGTGTAGAAT+AGG | + | chr3.3:94019625-94019644 | MS.gene69332:intron | 40.0% | |
| GAGCAGAAGAGAAATCTTAC+TGG | + | chr3.3:94019772-94019791 | MS.gene69332:CDS | 40.0% | |
| GAGGAGTTAAATCGTCAAGT+TGG | + | chr3.3:94021293-94021312 | MS.gene69332:CDS | 40.0% | |
| GATACTCTCCTGATACGTAT+CGG | - | chr3.3:94018529-94018548 | None:intergenic | 40.0% | |
| GATACTCTCGTGATACGTAT+CGG | - | chr3.3:94018598-94018617 | None:intergenic | 40.0% | |
| GATATTTCCCGATACGTATC+AGG | + | chr3.3:94018518-94018537 | MS.gene69332:intron | 40.0% | |
| GGGAAATATCAGACAGGTAT+CGG | - | chr3.3:94018508-94018527 | None:intergenic | 40.0% | |
| GGGACACAAAAGAATGTTTC+AGG | + | chr3.3:94021188-94021207 | MS.gene69332:CDS | 40.0% | |
| TATATATAACCGTACGTGGG+AGG | + | chr3.3:94019159-94019178 | MS.gene69332:intron | 40.0% | |
| TATCATATCCTGTGAGTCCA+TGG | + | chr3.3:94018007-94018026 | MS.gene69332:intron | 40.0% | |
| TATGAATTGAGGTCTGAGTG+AGG | - | chr3.3:94019339-94019358 | None:intergenic | 40.0% | |
| TGAAGAAATCTAGTTGTGGC+AGG | - | chr3.3:94022415-94022434 | None:intergenic | 40.0% | |
| TGCAGATCCTACTCAAATGA+AGG | + | chr3.3:94021844-94021863 | MS.gene69332:CDS | 40.0% | |
| TTATGTTATTCCTCAGCCCA+AGG | + | chr3.3:94022143-94022162 | MS.gene69332:intron | 40.0% | |
| TTCAAAGACAGACACACAGA+CGG | - | chr3.3:94019214-94019233 | None:intergenic | 40.0% | |
| TTCGTGTCGTATCTTGTATC+CGG | + | chr3.3:94019054-94019073 | MS.gene69332:intron | 40.0% | |
| TTTCTCTTCTGCTCTTTGAC+TGG | - | chr3.3:94019766-94019785 | None:intergenic | 40.0% | |
| TTTGCAAAATACTACCGGAG+AGG | + | chr3.3:94018104-94018123 | MS.gene69332:intron | 40.0% | |
| ! | ACCTTTTTATCTTGCACGTC+CGG | - | chr3.3:94020831-94020850 | None:intergenic | 40.0% |
| ! | ACTGCACCGATACAATGATA+CGG | - | chr3.3:94019026-94019045 | None:intergenic | 40.0% |
| ! | AGTGGTGGAATCATAGAACT+TGG | - | chr3.3:94019104-94019123 | None:intergenic | 40.0% |
| ! | CAGAATTACCATCTGAAGTC+CGG | - | chr3.3:94019076-94019095 | None:intergenic | 40.0% |
| ! | GAAACATTCTTTTGTGTCCC+AGG | - | chr3.3:94021188-94021207 | None:intergenic | 40.0% |
| ! | GATACGTATCAGGAGAGTAT+CGG | + | chr3.3:94018528-94018547 | MS.gene69332:intron | 40.0% |
| ! | GTGGTGGAATCATAGAACTT+GGG | - | chr3.3:94019103-94019122 | None:intergenic | 40.0% |
| ! | TAAGATTGGTGATCAACGGT+TGG | - | chr3.3:94018056-94018075 | None:intergenic | 40.0% |
| ! | TGATACGTATCGGGAAGTAT+CGG | - | chr3.3:94018588-94018607 | None:intergenic | 40.0% |
| ! | TTTAACTAGTAGTGCTGGAG+AGG | + | chr3.3:94021775-94021794 | MS.gene69332:CDS | 40.0% |
| ! | TTTCAGGTGAAGTCATTAGG+TGG | + | chr3.3:94021204-94021223 | MS.gene69332:CDS | 40.0% |
| !! | ACGTCCAATTTGAAGTATCG+AGG | - | chr3.3:94018457-94018476 | None:intergenic | 40.0% |
| !! | ACTGCTTTATTGGTTGATGG+TGG | + | chr3.3:94022599-94022618 | MS.gene69332:CDS | 40.0% |
| !! | AGTTGCAAAAGTGCTCAGAT+TGG | + | chr3.3:94020359-94020378 | MS.gene69332:intron | 40.0% |
| !! | CTTTATTGGTTGATGGTGGT+TGG | + | chr3.3:94022603-94022622 | MS.gene69332:CDS | 40.0% |
| !! | TGTGTGTCTGTCTTTGAAGT+GGG | + | chr3.3:94019216-94019235 | MS.gene69332:intron | 40.0% |
| !!! | CAAGGCTGGTTTTTATAGTG+AGG | + | chr3.3:94022161-94022180 | MS.gene69332:intron | 40.0% |
| !!! | CGAGTGATAGTTTTAGCACT+AGG | + | chr3.3:94020570-94020589 | MS.gene69332:intron | 40.0% |
| !!! | GTGATAGTTTTAGCACTAGG+TGG | + | chr3.3:94020573-94020592 | MS.gene69332:intron | 40.0% |
| AATACTTGAAGCGGAGATCG+AGG | + | chr3.3:94021274-94021293 | MS.gene69332:CDS | 45.0% | |
| ACAGCCATTTAGCAGCAATG+AGG | - | chr3.3:94021052-94021071 | None:intergenic | 45.0% | |
| ACCTGAAATCTCTTGAGCCT+CGG | + | chr3.3:94021354-94021373 | MS.gene69332:CDS | 45.0% | |
| AGACTAACCGCAGAGAAAGT+TGG | - | chr3.3:94020209-94020228 | None:intergenic | 45.0% | |
| ATAGCATACCATGGACTCAC+AGG | - | chr3.3:94018018-94018037 | None:intergenic | 45.0% | |
| ATCGGTGCAAGGATACATAG+AGG | - | chr3.3:94018490-94018509 | None:intergenic | 45.0% | |
| ATGAGGAAAGGATTCGAGAC+AGG | - | chr3.3:94022348-94022367 | None:intergenic | 45.0% | |
| CACTGTACATAAGCTGTGCA+AGG | - | chr3.3:94020731-94020750 | None:intergenic | 45.0% | |
| CAGTACAGATCAGCATAGAG+AGG | - | chr3.3:94021470-94021489 | None:intergenic | 45.0% | |
| CATAAGCTGTGCAAGGTTCT+CGG | - | chr3.3:94020724-94020743 | None:intergenic | 45.0% | |
| CGTATCGGGAAATATCAGAC+AGG | - | chr3.3:94018514-94018533 | None:intergenic | 45.0% | |
| CTACACTTGCCCTATTCCAT+GGG | - | chr3.3:94019622-94019641 | None:intergenic | 45.0% | |
| GACTAACCGCAGAGAAAGTT+GGG | - | chr3.3:94020208-94020227 | None:intergenic | 45.0% | |
| GAGATAGTAAGGGCCTCTAT+TGG | - | chr3.3:94022311-94022330 | None:intergenic | 45.0% | |
| GATAGGCAGTTTCTACATGC+TGG | + | chr3.3:94020127-94020146 | MS.gene69332:intron | 45.0% | |
| GATATTCCAGACTATGCACC+TGG | + | chr3.3:94021167-94021186 | MS.gene69332:CDS | 45.0% | |
| GCAACATTATGCCATCTAGC+TGG | + | chr3.3:94020609-94020628 | MS.gene69332:intron | 45.0% | |
| GGAAATTAGCTACACACCCT+AGG | - | chr3.3:94020922-94020941 | None:intergenic | 45.0% | |
| GGACATGGGAGAAAAACAGA+AGG | - | chr3.3:94021892-94021911 | None:intergenic | 45.0% | |
| GGTGAATCCAAATCCCCTAA+CGG | + | chr3.3:94019500-94019519 | MS.gene69332:CDS | 45.0% | |
| GTCGAATTTGACAGACTGCA+AGG | - | chr3.3:94021945-94021964 | None:intergenic | 45.0% | |
| TACGGGGTAGAGCATACAAA+AGG | - | chr3.3:94020243-94020262 | None:intergenic | 45.0% | |
| TCCGGACGTGCAAGATAAAA+AGG | + | chr3.3:94020827-94020846 | MS.gene69332:CDS | 45.0% | |
| TCTACACTTGCCCTATTCCA+TGG | - | chr3.3:94019623-94019642 | None:intergenic | 45.0% | |
| TCTCCTTAAGAACGGGACAT+GGG | - | chr3.3:94021906-94021925 | None:intergenic | 45.0% | |
| TCTTGAGCCTCGGAATTTGA+AGG | + | chr3.3:94021364-94021383 | MS.gene69332:CDS | 45.0% | |
| TCTTGTATCCGGACTTCAGA+TGG | + | chr3.3:94019065-94019084 | MS.gene69332:intron | 45.0% | |
| TGAGGAAAGGATTCGAGACA+GGG | - | chr3.3:94022347-94022366 | None:intergenic | 45.0% | |
| TGCTATTCCACGACACACAA+AGG | - | chr3.3:94020943-94020962 | None:intergenic | 45.0% | |
| TGTGAATCAACCCAGCTAGA+TGG | - | chr3.3:94020623-94020642 | None:intergenic | 45.0% | |
| TGTGATTGTTAGTGAGGGAG+TGG | - | chr3.3:94019122-94019141 | None:intergenic | 45.0% | |
| TGTGGATGCTATGAGACAGA+CGG | + | chr3.3:94019985-94020004 | MS.gene69332:CDS | 45.0% | |
| TTACATCTCTGTTCAGCACC+AGG | + | chr3.3:94021594-94021613 | MS.gene69332:intron | 45.0% | |
| TTCCATAAATTCCGGCTGCA+CGG | - | chr3.3:94019810-94019829 | None:intergenic | 45.0% | |
| TTGACGAAGGTGAACGAGTT+CGG | - | chr3.3:94019409-94019428 | None:intergenic | 45.0% | |
| TTTATCTTGCACGTCCGGAA+GGG | - | chr3.3:94020826-94020845 | None:intergenic | 45.0% | |
| TTTGACAGACTGCAAGGACA+AGG | - | chr3.3:94021939-94021958 | None:intergenic | 45.0% | |
| TTTGTATGCTCTACCCCGTA+CGG | + | chr3.3:94020243-94020262 | MS.gene69332:intron | 45.0% | |
| ! | CATTTCTGGACCTGAGAGAA+TGG | + | chr3.3:94021232-94021251 | MS.gene69332:CDS | 45.0% |
| ! | CTGTGTGTCTGTCTTTGAAG+TGG | + | chr3.3:94019215-94019234 | MS.gene69332:intron | 45.0% |
| ! | GGATTCACCCGCATCATTTT+TGG | - | chr3.3:94019489-94019508 | None:intergenic | 45.0% |
| ! | TCAGTTCTTGGTGGTCTTTC+TGG | - | chr3.3:94020429-94020448 | None:intergenic | 45.0% |
| ! | TTTGGAACAAGTTGCCCTTC+CGG | + | chr3.3:94020809-94020828 | MS.gene69332:CDS | 45.0% |
| ! | TTTTATCTTGCACGTCCGGA+AGG | - | chr3.3:94020827-94020846 | None:intergenic | 45.0% |
| !! | AAAAGTACCAGAGTGCCGTT+AGG | - | chr3.3:94019518-94019537 | None:intergenic | 45.0% |
| !! | AAAAGTGCTCAGATTGGCCT+GGG | + | chr3.3:94020365-94020384 | MS.gene69332:intron | 45.0% |
| !! | AAAGTACCAGAGTGCCGTTA+GGG | - | chr3.3:94019517-94019536 | None:intergenic | 45.0% |
| !! | TGTAAAAAGAGCACCTCCAC+CGG | + | chr3.3:94019835-94019854 | MS.gene69332:CDS | 45.0% |
| !!! | AAAATAAATAATATTTTTGT+TGG | + | chr3.3:94020964-94020983 | MS.gene69332:intron | 5.0% |
| !!! | AAATAAATAATATTTTTGTT+GGG | + | chr3.3:94020965-94020984 | MS.gene69332:intron | 5.0% |
| ACAAGACAACACGTTACCGG+TGG | - | chr3.3:94019854-94019873 | None:intergenic | 50.0% | |
| ACTTGGAACTCCTGCAAAGC+TGG | + | chr3.3:94022671-94022690 | MS.gene69332:CDS | 50.0% | |
| AGTCCACATCAGCTGGATGA+AGG | - | chr3.3:94021431-94021450 | None:intergenic | 50.0% | |
| ATATAACCGTACGTGGGAGG+TGG | + | chr3.3:94019162-94019181 | MS.gene69332:intron | 50.0% | |
| ATCTCTGTTCAGCACCAGGT+AGG | + | chr3.3:94021598-94021617 | MS.gene69332:intron | 50.0% | |
| GAGACTAGTGCATCCGAACT+TGG | + | chr3.3:94022573-94022592 | MS.gene69332:CDS | 50.0% | |
| GATTGTTAGTGAGGGAGTGG+TGG | - | chr3.3:94019119-94019138 | None:intergenic | 50.0% | |
| GTCTCCTTAAGAACGGGACA+TGG | - | chr3.3:94021907-94021926 | None:intergenic | 50.0% | |
| TAAAAACCAGCCTTGGGCTG+AGG | - | chr3.3:94022156-94022175 | None:intergenic | 50.0% | |
| TAGGATCTGCAACAGCCAGT+AGG | - | chr3.3:94021835-94021854 | None:intergenic | 50.0% | |
| TCCGAGGCTCAAGAGATTTC+AGG | - | chr3.3:94021358-94021377 | None:intergenic | 50.0% | |
| TCTCCCATGTCCCGTTCTTA+AGG | + | chr3.3:94021900-94021919 | MS.gene69332:intron | 50.0% | |
| TGATTTCCACCTCCCACGTA+CGG | - | chr3.3:94019171-94019190 | None:intergenic | 50.0% | |
| ! | TTTTAAGCGCAGGGAATGGG+AGG | - | chr3.3:94021687-94021706 | None:intergenic | 50.0% |
| !! | AAGTACCAGAGTGCCGTTAG+GGG | - | chr3.3:94019516-94019535 | None:intergenic | 50.0% |
| !! | ATCAGACAGGTATCGGTGCA+AGG | - | chr3.3:94018501-94018520 | None:intergenic | 50.0% |
| !! | CAAAAGTGCTCAGATTGGCC+TGG | + | chr3.3:94020364-94020383 | MS.gene69332:intron | 50.0% |
| AGACAACACGTTACCGGTGG+AGG | - | chr3.3:94019851-94019870 | None:intergenic | 55.0% | |
| AGACAGACACACAGACGGAC+AGG | - | chr3.3:94019209-94019228 | None:intergenic | 55.0% | |
| AGCAGACAGTCCACATCAGC+TGG | - | chr3.3:94021438-94021457 | None:intergenic | 55.0% | |
| CAAATCCCCTAACGGCACTC+TGG | + | chr3.3:94019508-94019527 | MS.gene69332:CDS | 55.0% | |
| CACATCAGCTGGATGAAGGC+AGG | - | chr3.3:94021427-94021446 | None:intergenic | 55.0% | |
| CTGCCTTCATCCAGCTGATG+TGG | + | chr3.3:94021425-94021444 | MS.gene69332:intron | 55.0% | |
| GACAGACACACAGACGGACA+GGG | - | chr3.3:94019208-94019227 | None:intergenic | 55.0% | |
| GACCGTGCAGCCGGAATTTA+TGG | + | chr3.3:94019805-94019824 | MS.gene69332:CDS | 55.0% | |
| GGCAATTCAGCCAGCTTTGC+AGG | - | chr3.3:94022684-94022703 | None:intergenic | 55.0% | |
| GTATGTCAAGACCGTGCAGC+CGG | + | chr3.3:94019796-94019815 | MS.gene69332:CDS | 55.0% | |
| GTTATTCCTCAGCCCAAGGC+TGG | + | chr3.3:94022147-94022166 | MS.gene69332:intron | 55.0% | |
| GTTTGAACGCCAGTGTTCCC+AGG | - | chr3.3:94020385-94020404 | None:intergenic | 55.0% | |
| TGTGTCCCAGGTGCATAGTC+TGG | - | chr3.3:94021176-94021195 | None:intergenic | 55.0% | |
| ! | CGCTATGCCCGCATCCTTTT+TGG | - | chr3.3:94020335-94020354 | None:intergenic | 55.0% |
| ! | GGTCTTTCTGGCACGATGGT+CGG | - | chr3.3:94020417-94020436 | None:intergenic | 55.0% |
| ! | TGGTGGTCTTTCTGGCACGA+TGG | - | chr3.3:94020421-94020440 | None:intergenic | 55.0% |
| !! | CAGAGTGCCGTTAGGGGATT+TGG | - | chr3.3:94019510-94019529 | None:intergenic | 55.0% |
| !! | TCAGATTGGCCTGGGAACAC+TGG | + | chr3.3:94020373-94020392 | MS.gene69332:intron | 55.0% |
| AAGCTGGCTGAATTGCCGCC+AGG | + | chr3.3:94022687-94022706 | MS.gene69332:CDS | 60.0% | |
| ! | CTGGCACGATGGTCGGTTCT+TGG | - | chr3.3:94020410-94020429 | None:intergenic | 60.0% |
| ! | GCACGATGGTCGGTTCTTGG+CGG | - | chr3.3:94020407-94020426 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 94017977 | 94022722 | 94017977 | ID=MS.gene69332 |
| chr3.3 | mRNA | 94017977 | 94022722 | 94017977 | ID=MS.gene69332.t1;Parent=MS.gene69332 |
| chr3.3 | exon | 94017977 | 94018017 | 94017977 | ID=MS.gene69332.t1.exon1;Parent=MS.gene69332.t1 |
| chr3.3 | CDS | 94017977 | 94018017 | 94017977 | ID=cds.MS.gene69332.t1;Parent=MS.gene69332.t1 |
| chr3.3 | exon | 94019442 | 94019529 | 94019442 | ID=MS.gene69332.t1.exon2;Parent=MS.gene69332.t1 |
| chr3.3 | CDS | 94019442 | 94019529 | 94019442 | ID=cds.MS.gene69332.t1;Parent=MS.gene69332.t1 |
| chr3.3 | exon | 94019767 | 94019856 | 94019767 | ID=MS.gene69332.t1.exon3;Parent=MS.gene69332.t1 |
| chr3.3 | CDS | 94019767 | 94019856 | 94019767 | ID=cds.MS.gene69332.t1;Parent=MS.gene69332.t1 |
| chr3.3 | exon | 94019983 | 94020063 | 94019983 | ID=MS.gene69332.t1.exon4;Parent=MS.gene69332.t1 |
| chr3.3 | CDS | 94019983 | 94020063 | 94019983 | ID=cds.MS.gene69332.t1;Parent=MS.gene69332.t1 |
| chr3.3 | exon | 94020717 | 94020848 | 94020717 | ID=MS.gene69332.t1.exon5;Parent=MS.gene69332.t1 |
| chr3.3 | CDS | 94020717 | 94020848 | 94020717 | ID=cds.MS.gene69332.t1;Parent=MS.gene69332.t1 |
| chr3.3 | exon | 94021167 | 94021385 | 94021167 | ID=MS.gene69332.t1.exon6;Parent=MS.gene69332.t1 |
| chr3.3 | CDS | 94021167 | 94021385 | 94021167 | ID=cds.MS.gene69332.t1;Parent=MS.gene69332.t1 |
| chr3.3 | exon | 94021773 | 94021865 | 94021773 | ID=MS.gene69332.t1.exon7;Parent=MS.gene69332.t1 |
| chr3.3 | CDS | 94021773 | 94021865 | 94021773 | ID=cds.MS.gene69332.t1;Parent=MS.gene69332.t1 |
| chr3.3 | exon | 94022561 | 94022722 | 94022561 | ID=MS.gene69332.t1.exon8;Parent=MS.gene69332.t1 |
| chr3.3 | CDS | 94022561 | 94022722 | 94022561 | ID=cds.MS.gene69332.t1;Parent=MS.gene69332.t1 |
| Gene Sequence |
| Protein sequence |
