Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09053.t1 | XP_013446534.1 | 97.6 | 787 | 19 | 0 | 1 | 787 | 126 | 912 | 0.00E+00 | 1583.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09053.t1 | Q9CAG3 | 67.6 | 787 | 245 | 6 | 5 | 787 | 133 | 913 | 0.0e+00 | 1083.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09053.t1 | A0A072TTP2 | 97.6 | 787 | 19 | 0 | 1 | 787 | 126 | 912 | 0.0e+00 | 1583.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene09053 | 0.828249 | 9.98E-55 | -1.69E-46 |
| MS.gene049222 | MS.gene09053 | 0.844281 | 8.33E-59 | -1.69E-46 |
| MS.gene049232 | MS.gene09053 | 0.872809 | 2.39E-67 | -1.69E-46 |
| MS.gene049285 | MS.gene09053 | 0.817746 | 2.81E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene09053 | 0.81513 | 1.08E-51 | -1.69E-46 |
| MS.gene049373 | MS.gene09053 | 0.813749 | 2.19E-51 | -1.69E-46 |
| MS.gene049552 | MS.gene09053 | 0.830849 | 2.33E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene09053 | 0.835074 | 2.07E-56 | -1.69E-46 |
| MS.gene049633 | MS.gene09053 | 0.81906 | 1.42E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene09053 | 0.832332 | 1.00E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene09053 | 0.837319 | 5.57E-57 | -1.69E-46 |
| MS.gene049794 | MS.gene09053 | 0.822825 | 1.93E-53 | -1.69E-46 |
| MS.gene049865 | MS.gene09053 | 0.842121 | 3.14E-58 | -1.69E-46 |
| MS.gene05010 | MS.gene09053 | 0.858531 | 7.73E-63 | -1.69E-46 |
| MS.gene050170 | MS.gene09053 | 0.889748 | 1.83E-73 | -1.69E-46 |
| MS.gene050216 | MS.gene09053 | 0.809174 | 2.16E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene09053 | 0.846112 | 2.66E-59 | -1.69E-46 |
| MS.gene050381 | MS.gene09053 | -0.836506 | 8.99E-57 | -1.69E-46 |
| MS.gene050496 | MS.gene09053 | 0.88572 | 6.37E-72 | -1.69E-46 |
| MS.gene050499 | MS.gene09053 | 0.817347 | 3.46E-52 | -1.69E-46 |
| MS.gene050502 | MS.gene09053 | 0.888378 | 6.22E-73 | -1.69E-46 |
| MS.gene050504 | MS.gene09053 | 0.857509 | 1.56E-62 | -1.69E-46 |
| MS.gene050518 | MS.gene09053 | 0.813289 | 2.76E-51 | -1.69E-46 |
| MS.gene050520 | MS.gene09053 | 0.819904 | 9.09E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene09053 | 0.840359 | 9.12E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene09053 | 0.822007 | 2.98E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene09053 | 0.835769 | 1.38E-56 | -1.69E-46 |
| MS.gene050697 | MS.gene09053 | 0.80079 | 1.22E-48 | -1.69E-46 |
| MS.gene050699 | MS.gene09053 | 0.832323 | 1.01E-55 | -1.69E-46 |
| MS.gene050747 | MS.gene09053 | 0.863805 | 1.92E-64 | -1.69E-46 |
| MS.gene050772 | MS.gene09053 | 0.832037 | 1.19E-55 | -1.69E-46 |
| MS.gene05080 | MS.gene09053 | 0.828114 | 1.08E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene09053 | 0.887238 | 1.70E-72 | -1.69E-46 |
| MS.gene050871 | MS.gene09053 | 0.889349 | 2.62E-73 | -1.69E-46 |
| MS.gene050883 | MS.gene09053 | -0.811594 | 6.48E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene09053 | 0.808059 | 3.73E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene09053 | 0.861589 | 9.22E-64 | -1.69E-46 |
| MS.gene050986 | MS.gene09053 | 0.854693 | 1.04E-61 | -1.69E-46 |
| MS.gene051268 | MS.gene09053 | 0.83808 | 3.56E-57 | -1.69E-46 |
| MS.gene05141 | MS.gene09053 | -0.808619 | 2.83E-50 | -1.69E-46 |
| MS.gene051509 | MS.gene09053 | 0.838778 | 2.35E-57 | -1.69E-46 |
| MS.gene051551 | MS.gene09053 | 0.830904 | 2.26E-55 | -1.69E-46 |
| MS.gene051560 | MS.gene09053 | 0.836933 | 7.00E-57 | -1.69E-46 |
| MS.gene051694 | MS.gene09053 | 0.801666 | 8.09E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene09053 | 0.840854 | 6.77E-58 | -1.69E-46 |
| MS.gene051941 | MS.gene09053 | 0.848408 | 6.25E-60 | -1.69E-46 |
| MS.gene051946 | MS.gene09053 | -0.839563 | 1.47E-57 | -1.69E-46 |
| MS.gene052066 | MS.gene09053 | 0.846693 | 1.85E-59 | -1.69E-46 |
| MS.gene052164 | MS.gene09053 | 0.873818 | 1.10E-67 | -1.69E-46 |
| MS.gene052346 | MS.gene09053 | 0.856792 | 2.53E-62 | -1.69E-46 |
| MS.gene052413 | MS.gene09053 | 0.809615 | 1.73E-50 | -1.69E-46 |
| MS.gene052482 | MS.gene09053 | 0.84966 | 2.80E-60 | -1.69E-46 |
| MS.gene052486 | MS.gene09053 | 0.858228 | 9.51E-63 | -1.69E-46 |
| MS.gene052501 | MS.gene09053 | 0.806368 | 8.51E-50 | -1.69E-46 |
| MS.gene052503 | MS.gene09053 | 0.862964 | 3.49E-64 | -1.69E-46 |
| MS.gene052504 | MS.gene09053 | 0.80323 | 3.85E-49 | -1.69E-46 |
| MS.gene052506 | MS.gene09053 | 0.828795 | 7.37E-55 | -1.69E-46 |
| MS.gene052615 | MS.gene09053 | 0.830939 | 2.21E-55 | -1.69E-46 |
| MS.gene052822 | MS.gene09053 | 0.818364 | 2.04E-52 | -1.69E-46 |
| MS.gene052823 | MS.gene09053 | 0.866856 | 2.10E-65 | -1.69E-46 |
| MS.gene052825 | MS.gene09053 | 0.863488 | 2.40E-64 | -1.69E-46 |
| MS.gene052966 | MS.gene09053 | 0.8793 | 1.39E-69 | -1.69E-46 |
| MS.gene052982 | MS.gene09053 | 0.813379 | 2.64E-51 | -1.69E-46 |
| MS.gene052999 | MS.gene09053 | 0.803234 | 3.84E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene09053 | 0.89725 | 1.69E-76 | -1.69E-46 |
| MS.gene053207 | MS.gene09053 | 0.831206 | 1.90E-55 | -1.69E-46 |
| MS.gene053213 | MS.gene09053 | 0.838491 | 2.79E-57 | -1.69E-46 |
| MS.gene053286 | MS.gene09053 | 0.843243 | 1.58E-58 | -1.69E-46 |
| MS.gene053318 | MS.gene09053 | 0.868077 | 8.54E-66 | -1.69E-46 |
| MS.gene053420 | MS.gene09053 | -0.813378 | 2.64E-51 | -1.69E-46 |
| MS.gene053436 | MS.gene09053 | 0.895334 | 1.06E-75 | -1.69E-46 |
| MS.gene053479 | MS.gene09053 | 0.832143 | 1.12E-55 | -1.69E-46 |
| MS.gene053480 | MS.gene09053 | 0.817387 | 3.39E-52 | -1.69E-46 |
| MS.gene053549 | MS.gene09053 | -0.824437 | 8.08E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene09053 | 0.880989 | 3.48E-70 | -1.69E-46 |
| MS.gene053626 | MS.gene09053 | 0.860212 | 2.42E-63 | -1.69E-46 |
| MS.gene053633 | MS.gene09053 | 0.836556 | 8.73E-57 | -1.69E-46 |
| MS.gene053824 | MS.gene09053 | 0.845385 | 4.20E-59 | -1.69E-46 |
| MS.gene053997 | MS.gene09053 | 0.834356 | 3.14E-56 | -1.69E-46 |
| MS.gene054003 | MS.gene09053 | 0.826506 | 2.61E-54 | -1.69E-46 |
| MS.gene054408 | MS.gene09053 | 0.831996 | 1.22E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene09053 | 0.870723 | 1.18E-66 | -1.69E-46 |
| MS.gene054600 | MS.gene09053 | 0.844501 | 7.27E-59 | -1.69E-46 |
| MS.gene054706 | MS.gene09053 | -0.809342 | 1.98E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene09053 | 0.839449 | 1.57E-57 | -1.69E-46 |
| MS.gene054927 | MS.gene09053 | 0.855289 | 6.97E-62 | -1.69E-46 |
| MS.gene05492 | MS.gene09053 | 0.802933 | 4.43E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene09053 | 0.814305 | 1.65E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene09053 | 0.842281 | 2.85E-58 | -1.69E-46 |
| MS.gene055139 | MS.gene09053 | -0.802099 | 6.59E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene09053 | 0.803012 | 4.27E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene09053 | 0.839886 | 1.21E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene09053 | 0.832458 | 9.34E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene09053 | 0.869779 | 2.40E-66 | -1.69E-46 |
| MS.gene055629 | MS.gene09053 | 0.819903 | 9.09E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene09053 | 0.82091 | 5.34E-53 | -1.69E-46 |
| MS.gene055741 | MS.gene09053 | 0.809799 | 1.58E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene09053 | 0.814345 | 1.62E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene09053 | 0.870822 | 1.09E-66 | -1.69E-46 |
| MS.gene055909 | MS.gene09053 | 0.81923 | 1.30E-52 | -1.69E-46 |
| MS.gene055911 | MS.gene09053 | 0.81804 | 2.41E-52 | -1.69E-46 |
| MS.gene055941 | MS.gene09053 | 0.815175 | 1.06E-51 | -1.69E-46 |
| MS.gene05601 | MS.gene09053 | 0.831147 | 1.97E-55 | -1.69E-46 |
| MS.gene056040 | MS.gene09053 | 0.870062 | 1.94E-66 | -1.69E-46 |
| MS.gene056046 | MS.gene09053 | 0.831036 | 2.10E-55 | -1.69E-46 |
| MS.gene056166 | MS.gene09053 | 0.882339 | 1.13E-70 | -1.69E-46 |
| MS.gene056310 | MS.gene09053 | -0.839274 | 1.75E-57 | -1.69E-46 |
| MS.gene056311 | MS.gene09053 | -0.820807 | 5.64E-53 | -1.69E-46 |
| MS.gene056313 | MS.gene09053 | -0.828676 | 7.88E-55 | -1.69E-46 |
| MS.gene056346 | MS.gene09053 | 0.837538 | 4.90E-57 | -1.69E-46 |
| MS.gene056387 | MS.gene09053 | 0.805289 | 1.43E-49 | -1.69E-46 |
| MS.gene056409 | MS.gene09053 | 0.819226 | 1.30E-52 | -1.69E-46 |
| MS.gene056446 | MS.gene09053 | 0.836212 | 1.07E-56 | -1.69E-46 |
| MS.gene056448 | MS.gene09053 | 0.808156 | 3.56E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene09053 | 0.887381 | 1.50E-72 | -1.69E-46 |
| MS.gene056510 | MS.gene09053 | 0.868074 | 8.55E-66 | -1.69E-46 |
| MS.gene056610 | MS.gene09053 | 0.823316 | 1.48E-53 | -1.69E-46 |
| MS.gene056647 | MS.gene09053 | -0.825047 | 5.80E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene09053 | 0.816146 | 6.43E-52 | -1.69E-46 |
| MS.gene05666 | MS.gene09053 | 0.801649 | 8.15E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene09053 | 0.808096 | 3.66E-50 | -1.69E-46 |
| MS.gene056878 | MS.gene09053 | 0.860432 | 2.07E-63 | -1.69E-46 |
| MS.gene057014 | MS.gene09053 | -0.834274 | 3.30E-56 | -1.69E-46 |
| MS.gene057019 | MS.gene09053 | 0.826551 | 2.55E-54 | -1.69E-46 |
| MS.gene057086 | MS.gene09053 | 0.849573 | 2.97E-60 | -1.69E-46 |
| MS.gene05726 | MS.gene09053 | -0.81987 | 9.26E-53 | -1.69E-46 |
| MS.gene057499 | MS.gene09053 | -0.806175 | 9.34E-50 | -1.69E-46 |
| MS.gene057506 | MS.gene09053 | -0.80849 | 3.02E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene09053 | 0.810757 | 9.84E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene09053 | 0.820573 | 6.39E-53 | -1.69E-46 |
| MS.gene05787 | MS.gene09053 | 0.864189 | 1.45E-64 | -1.69E-46 |
| MS.gene058130 | MS.gene09053 | 0.831824 | 1.34E-55 | -1.69E-46 |
| MS.gene058157 | MS.gene09053 | 0.862552 | 4.68E-64 | -1.69E-46 |
| MS.gene058171 | MS.gene09053 | -0.817341 | 3.47E-52 | -1.69E-46 |
| MS.gene058173 | MS.gene09053 | -0.811578 | 6.53E-51 | -1.69E-46 |
| MS.gene058175 | MS.gene09053 | -0.813352 | 2.67E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene09053 | 0.846632 | 1.92E-59 | -1.69E-46 |
| MS.gene058338 | MS.gene09053 | 0.809211 | 2.12E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene09053 | 0.879867 | 8.77E-70 | -1.69E-46 |
| MS.gene058419 | MS.gene09053 | 0.804425 | 2.17E-49 | -1.69E-46 |
| MS.gene058420 | MS.gene09053 | 0.855351 | 6.69E-62 | -1.69E-46 |
| MS.gene058544 | MS.gene09053 | 0.833599 | 4.86E-56 | -1.69E-46 |
| MS.gene058773 | MS.gene09053 | 0.820894 | 5.39E-53 | -1.69E-46 |
| MS.gene058838 | MS.gene09053 | 0.820482 | 6.70E-53 | -1.69E-46 |
| MS.gene05883 | MS.gene09053 | 0.807842 | 4.15E-50 | -1.69E-46 |
| MS.gene058978 | MS.gene09053 | -0.80067 | 1.29E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene09053 | 0.847913 | 8.56E-60 | -1.69E-46 |
| MS.gene059023 | MS.gene09053 | 0.861334 | 1.10E-63 | -1.69E-46 |
| MS.gene059034 | MS.gene09053 | 0.842237 | 2.92E-58 | -1.69E-46 |
| MS.gene059129 | MS.gene09053 | 0.804692 | 1.91E-49 | -1.69E-46 |
| MS.gene059223 | MS.gene09053 | -0.808753 | 2.65E-50 | -1.69E-46 |
| MS.gene059303 | MS.gene09053 | 0.870991 | 9.60E-67 | -1.69E-46 |
| MS.gene059367 | MS.gene09053 | 0.869633 | 2.67E-66 | -1.69E-46 |
| MS.gene059368 | MS.gene09053 | 0.826664 | 2.40E-54 | -1.69E-46 |
| MS.gene059517 | MS.gene09053 | 0.866373 | 2.99E-65 | -1.69E-46 |
| MS.gene059667 | MS.gene09053 | 0.833818 | 4.29E-56 | -1.69E-46 |
| MS.gene059680 | MS.gene09053 | 0.861352 | 1.09E-63 | -1.69E-46 |
| MS.gene059718 | MS.gene09053 | 0.85657 | 2.94E-62 | -1.69E-46 |
| MS.gene059756 | MS.gene09053 | 0.806087 | 9.75E-50 | -1.69E-46 |
| MS.gene059801 | MS.gene09053 | 0.811282 | 7.57E-51 | -1.69E-46 |
| MS.gene059837 | MS.gene09053 | 0.874703 | 5.49E-68 | -1.69E-46 |
| MS.gene059865 | MS.gene09053 | 0.868524 | 6.13E-66 | -1.69E-46 |
| MS.gene05995 | MS.gene09053 | 0.826396 | 2.78E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene09053 | 0.838541 | 2.70E-57 | -1.69E-46 |
| MS.gene06000 | MS.gene09053 | 0.885554 | 7.36E-72 | -1.69E-46 |
| MS.gene060187 | MS.gene09053 | -0.861261 | 1.16E-63 | -1.69E-46 |
| MS.gene06027 | MS.gene09053 | 0.803254 | 3.81E-49 | -1.69E-46 |
| MS.gene060339 | MS.gene09053 | 0.806967 | 6.36E-50 | -1.69E-46 |
| MS.gene060372 | MS.gene09053 | 0.833303 | 5.76E-56 | -1.69E-46 |
| MS.gene060482 | MS.gene09053 | 0.879663 | 1.04E-69 | -1.69E-46 |
| MS.gene060485 | MS.gene09053 | 0.813331 | 2.70E-51 | -1.69E-46 |
| MS.gene060593 | MS.gene09053 | -0.81548 | 9.05E-52 | -1.69E-46 |
| MS.gene060595 | MS.gene09053 | -0.855082 | 8.01E-62 | -1.69E-46 |
| MS.gene060703 | MS.gene09053 | 0.815798 | 7.69E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene09053 | 0.826201 | 3.09E-54 | -1.69E-46 |
| MS.gene060778 | MS.gene09053 | 0.89334 | 6.89E-75 | -1.69E-46 |
| MS.gene06077 | MS.gene09053 | 0.888282 | 6.78E-73 | -1.69E-46 |
| MS.gene060835 | MS.gene09053 | 0.816961 | 4.22E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene09053 | 0.822516 | 2.27E-53 | -1.69E-46 |
| MS.gene06092 | MS.gene09053 | 0.824249 | 8.94E-54 | -1.69E-46 |
| MS.gene06097 | MS.gene09053 | 0.808328 | 3.27E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene09053 | 0.875619 | 2.67E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 199 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTTGTTATTGCTGATTC+TGG | 0.123296 | 4.4:-16235316 | None:intergenic |
| TTCCCCTGACGAAGAGTATT+TGG | 0.159442 | 4.4:+16237133 | MS.gene09053:CDS |
| CTAACAAGTTCCTCTTTATC+AGG | 0.169266 | 4.4:-16234130 | None:intergenic |
| AGAATTTACTAAACAATTTC+AGG | 0.178920 | 4.4:-16237202 | None:intergenic |
| TTATATTGATGGTGTTAATT+TGG | 0.191367 | 4.4:+16234540 | MS.gene09053:CDS |
| CGCCATAGTGGCTGCAAGTT+TGG | 0.215210 | 4.4:-16234473 | None:intergenic |
| TTCAATAGCTCAATATTTAC+TGG | 0.223964 | 4.4:-16235169 | None:intergenic |
| CAACATGCTGCTATAAATTT+CGG | 0.244386 | 4.4:+16236927 | MS.gene09053:CDS |
| AGATTCTACCCATTCTTTAA+TGG | 0.248411 | 4.4:-16236721 | None:intergenic |
| GCTCGACAAAGTTTAATAAA+TGG | 0.267126 | 4.4:+16236035 | MS.gene09053:CDS |
| GGAGGATGATTTCCGATAAA+TGG | 0.273826 | 4.4:-16233653 | None:intergenic |
| TATATTGATGGTGTTAATTT+GGG | 0.275468 | 4.4:+16234541 | MS.gene09053:CDS |
| TCATCTCGCGGCACATAAAC+AGG | 0.295508 | 4.4:-16234379 | None:intergenic |
| TTCAAAGGAGTTCCATTTAT+CGG | 0.310252 | 4.4:+16233641 | MS.gene09053:CDS |
| CTCTTCCGGCAGATCTTATT+CGG | 0.323141 | 4.4:+16236153 | MS.gene09053:CDS |
| CATTCCTTTCAAGTGTTTCT+CGG | 0.335053 | 4.4:+16234504 | MS.gene09053:CDS |
| ATTGACAAGCTTTATATTGA+TGG | 0.336229 | 4.4:+16234529 | MS.gene09053:CDS |
| GCCATAGTGGCTGCAAGTTT+GGG | 0.336382 | 4.4:-16234472 | None:intergenic |
| TCATACTTACGACAATCATA+TGG | 0.339367 | 4.4:+16236892 | MS.gene09053:CDS |
| TGTGTTAGCTGGAAAGAAAA+TGG | 0.341273 | 4.4:-16233694 | None:intergenic |
| AATTTCGGGCAATACCCTTT+TGG | 0.341455 | 4.4:+16236942 | MS.gene09053:CDS |
| TTGGGAGATGAAGAGAATAA+AGG | 0.344498 | 4.4:+16234559 | MS.gene09053:CDS |
| TCCTCTTTGGTATCTAGTTT+AGG | 0.345137 | 4.4:-16236861 | None:intergenic |
| AATTATAAATGCAAGAAATA+AGG | 0.345568 | 4.4:+16237250 | MS.gene09053:CDS |
| ATGAAACAGGTCTTCAGTTC+TGG | 0.346773 | 4.4:+16234613 | MS.gene09053:CDS |
| ATGCCACAGCACACTGGATT+TGG | 0.347347 | 4.4:+16235695 | MS.gene09053:CDS |
| GACATCCCAGCTATTGTAAA+AGG | 0.352857 | 4.4:+16234655 | MS.gene09053:CDS |
| ACAACATATGGAATGTTTGA+TGG | 0.357193 | 4.4:-16233546 | None:intergenic |
| TACCAAAGTAATGGCTGTTC+AGG | 0.357660 | 4.4:+16237094 | MS.gene09053:CDS |
| AGATAGATTTGCTTGGTTGC+GGG | 0.363128 | 4.4:+16235108 | MS.gene09053:CDS |
| AAACTAGATCCAACTATCTA+TGG | 0.366904 | 4.4:+16235289 | MS.gene09053:CDS |
| AACATGCTGCTATAAATTTC+GGG | 0.376754 | 4.4:+16236928 | MS.gene09053:CDS |
| TGACTCATTTGCATAATCAT+TGG | 0.376857 | 4.4:+16237162 | MS.gene09053:CDS |
| CGATGCAATTGAATTTGATT+CGG | 0.377861 | 4.4:-16236763 | None:intergenic |
| ATCATCCTCCACGGCTTCAC+TGG | 0.380490 | 4.4:+16233666 | MS.gene09053:CDS |
| GACTCCACGACCAGTTGCTC+CGG | 0.383763 | 4.4:-16237342 | None:intergenic |
| GAGCATGTGGAGATTTGATA+TGG | 0.388119 | 4.4:+16236127 | MS.gene09053:CDS |
| ACAATCATATGGGTTGCTTC+AGG | 0.388863 | 4.4:+16236903 | MS.gene09053:CDS |
| TTCACAGTGCCAAGTGACTT+TGG | 0.393066 | 4.4:+16233585 | MS.gene09053:CDS |
| GGATGTAGCAACTTGTAAAT+AGG | 0.393191 | 4.4:-16235978 | None:intergenic |
| CTATGAGTAGCAATTATATA+TGG | 0.396742 | 4.4:-16235936 | None:intergenic |
| TGATTTCACTCCACCACTCT+TGG | 0.397874 | 4.4:-16236797 | None:intergenic |
| GAACTCCTTTGAACGAAGAT+TGG | 0.398217 | 4.4:-16233631 | None:intergenic |
| TATCCTCGTCGCTGTAGAAC+CGG | 0.398710 | 4.4:+16234181 | MS.gene09053:CDS |
| ATTTGATATGGAGTCTCTTC+CGG | 0.403194 | 4.4:+16236139 | MS.gene09053:CDS |
| GTTCTACAGCGACGAGGATA+AGG | 0.403861 | 4.4:-16234178 | None:intergenic |
| TGGGAGATGAAGAGAATAAA+GGG | 0.405860 | 4.4:+16234560 | MS.gene09053:CDS |
| CTGCAGATGGACTTCTAATC+TGG | 0.406327 | 4.4:+16236694 | MS.gene09053:CDS |
| TATGAAAGATAGGTCCTCTT+TGG | 0.407757 | 4.4:-16236874 | None:intergenic |
| TTGAATATGATTCTACTTTG+AGG | 0.408949 | 4.4:-16233741 | None:intergenic |
| GCAGAGTATTCCACAACATA+TGG | 0.411374 | 4.4:-16233558 | None:intergenic |
| ACCCAAACTTGCAGCCACTA+TGG | 0.412388 | 4.4:+16234471 | MS.gene09053:CDS |
| TCCCCTGACGAAGAGTATTT+GGG | 0.416587 | 4.4:+16237134 | MS.gene09053:CDS |
| TGAATATGATTCTACTTTGA+GGG | 0.420439 | 4.4:-16233740 | None:intergenic |
| TTGTCAGGACCCGGAGCAAC+TGG | 0.420733 | 4.4:+16237332 | MS.gene09053:CDS |
| AGCAATAACAAAGGAACTAC+TGG | 0.430247 | 4.4:+16235324 | MS.gene09053:CDS |
| GTTGAGTAGGCAATGATGAT+AGG | 0.431532 | 4.4:-16237064 | None:intergenic |
| GAGATAGATTTGCTTGGTTG+CGG | 0.431829 | 4.4:+16235107 | MS.gene09053:CDS |
| TATGGAATGTTTGATGGCTT+CGG | 0.432986 | 4.4:-16233540 | None:intergenic |
| TTTGCAAGGCAAGCCTTAGC+TGG | 0.434446 | 4.4:+16235139 | MS.gene09053:CDS |
| TGGTGGAATAAGCTTGGAAA+AGG | 0.441048 | 4.4:+16235357 | MS.gene09053:CDS |
| AAGCGGTGCTGCCCAAGAAC+AGG | 0.441538 | 4.4:+16234051 | MS.gene09053:CDS |
| AGGGTTGCCTAACTCATTGT+AGG | 0.442421 | 4.4:-16234110 | None:intergenic |
| TCTGGTCTGCCATTAAAGAA+TGG | 0.443639 | 4.4:+16236712 | MS.gene09053:CDS |
| CCAAGTTTGAAAAGTAGAAC+TGG | 0.445657 | 4.4:+16237275 | MS.gene09053:CDS |
| TTCATCAACTAGTAAATCAT+TGG | 0.446490 | 4.4:+16235758 | MS.gene09053:CDS |
| GGACCCGGAGCAACTGGTCG+TGG | 0.447142 | 4.4:+16237338 | MS.gene09053:CDS |
| AGAAGTCCATCTGCAGCATA+AGG | 0.447808 | 4.4:-16236687 | None:intergenic |
| GTGGAGTGAAATCAAGTGTA+AGG | 0.450222 | 4.4:+16236806 | MS.gene09053:CDS |
| AAAGGAAGCAAAAGTTCATA+AGG | 0.455254 | 4.4:-16237311 | None:intergenic |
| CATACTTACGACAATCATAT+GGG | 0.460891 | 4.4:+16236893 | MS.gene09053:CDS |
| TGACCCAAATACTCTTCGTC+AGG | 0.461331 | 4.4:-16237137 | None:intergenic |
| GAGTTCATCTTCTTGATGAA+TGG | 0.462879 | 4.4:-16235529 | None:intergenic |
| AGAGAAAGCTCAATAGCTAT+AGG | 0.463940 | 4.4:-16235619 | None:intergenic |
| TTTACACCACAGGGCATTGA+AGG | 0.466878 | 4.4:-16236645 | None:intergenic |
| TCCATTGTATAGCGCGTATG+AGG | 0.467969 | 4.4:-16235999 | None:intergenic |
| CATTACCAATCTTCGTTCAA+AGG | 0.468216 | 4.4:+16233626 | MS.gene09053:CDS |
| CTCATGAGGGTAGGACGGTT+AGG | 0.468763 | 4.4:-16236975 | None:intergenic |
| GAACTTGTTAGACCAGTCAT+TGG | 0.470623 | 4.4:+16234142 | MS.gene09053:CDS |
| CTGGTCTGCCATTAAAGAAT+GGG | 0.472539 | 4.4:+16236713 | MS.gene09053:CDS |
| GGATCTAGTTTGCTGCGGAT+TGG | 0.473071 | 4.4:-16235277 | None:intergenic |
| AGTAAATATTGAGCTATTGA+AGG | 0.476774 | 4.4:+16235171 | MS.gene09053:CDS |
| TAATCATTGGATCAATGATC+AGG | 0.480482 | 4.4:+16237175 | MS.gene09053:CDS |
| TTGGTAGCTTGAAGTTGAGT+AGG | 0.480940 | 4.4:-16237077 | None:intergenic |
| TACTAGACTTGAGGAGATAG+AGG | 0.484216 | 4.4:+16237226 | MS.gene09053:CDS |
| TTAGGCACATATCCTCCAAA+AGG | 0.484226 | 4.4:-16236957 | None:intergenic |
| ACAAAGTTTAATAAATGGAG+GGG | 0.485869 | 4.4:+16236040 | MS.gene09053:CDS |
| GGTGGGAAAAGTGATGAAAC+AGG | 0.490922 | 4.4:+16234600 | MS.gene09053:CDS |
| GAACTACTGGAGCAAGAACT+TGG | 0.493456 | 4.4:+16235337 | MS.gene09053:CDS |
| GGAGCGAGTAGGAGGTCTTC+CGG | 0.493994 | 4.4:-16234200 | None:intergenic |
| AAACAGGATGCATTTGCTGC+TGG | 0.495438 | 4.4:+16234418 | MS.gene09053:CDS |
| CGCCGAAGATCTTTGATACC+AGG | 0.496253 | 4.4:-16234004 | None:intergenic |
| TTGCTTCCTTTGTCAGGACC+CGG | 0.497544 | 4.4:+16237323 | MS.gene09053:CDS |
| CGAATCAAATTCAATTGCAT+CGG | 0.498807 | 4.4:+16236764 | MS.gene09053:CDS |
| GAGGCATAAGCTTTCCTCTC+GGG | 0.499830 | 4.4:-16235556 | None:intergenic |
| TTGTAATGAAGAGAATCGTC+CGG | 0.500870 | 4.4:-16235579 | None:intergenic |
| GTGTTAGCTGGAAAGAAAAT+GGG | 0.502615 | 4.4:-16233693 | None:intergenic |
| CTCTCATGATCTCCAATGAC+TGG | 0.509818 | 4.4:-16234154 | None:intergenic |
| TACTGGATTGACTCCAGCTA+AGG | 0.511465 | 4.4:-16235152 | None:intergenic |
| ATAATAGAAAATCTCTTGGT+GGG | 0.512813 | 4.4:+16234583 | MS.gene09053:CDS |
| TTGTTATTGCTGATTCTGGA+GGG | 0.513518 | 4.4:-16235312 | None:intergenic |
| TATGCTCCCTACAATGAGTT+AGG | 0.514068 | 4.4:+16234103 | MS.gene09053:CDS |
| CACCTGGTATCAAAGATCTT+CGG | 0.514238 | 4.4:+16234002 | MS.gene09053:CDS |
| GAATGAATCCATGTGTTAGC+TGG | 0.514422 | 4.4:-16233705 | None:intergenic |
| AGAACTTGGTGGAATAAGCT+TGG | 0.516371 | 4.4:+16235351 | MS.gene09053:CDS |
| TTGTCGTAAGTATGAAAGAT+AGG | 0.519427 | 4.4:-16236884 | None:intergenic |
| TAGTCCTGGAAAATATGCCT+TGG | 0.520574 | 4.4:+16236082 | MS.gene09053:CDS |
| CGCGGCACATAAACAGGGTG+TGG | 0.521515 | 4.4:-16234373 | None:intergenic |
| GTCCTGAACAGCCATTACTT+TGG | 0.521910 | 4.4:-16237096 | None:intergenic |
| ATTCTCTTCATTACAAAGGC+CGG | 0.525411 | 4.4:+16235586 | MS.gene09053:CDS |
| AGGGATAATAGAAAATCTCT+TGG | 0.530957 | 4.4:+16234579 | MS.gene09053:CDS |
| TACCTCCGAATAAGATCTGC+CGG | 0.531248 | 4.4:-16236158 | None:intergenic |
| GAAGTCCATCTGCAGCATAA+GGG | 0.532536 | 4.4:-16236686 | None:intergenic |
| ACTCCACGACCAGTTGCTCC+GGG | 0.533633 | 4.4:-16237341 | None:intergenic |
| ATCAAACATTCCATATGTTG+TGG | 0.534612 | 4.4:+16233548 | MS.gene09053:CDS |
| CATGTTAGCTCAAATGATGC+TGG | 0.535268 | 4.4:+16235733 | MS.gene09053:CDS |
| GTTAGGCAACCCTGATAAAG+AGG | 0.537690 | 4.4:+16234120 | MS.gene09053:CDS |
| TCTGGAGGGCCATAGATAGT+TGG | 0.541049 | 4.4:-16235298 | None:intergenic |
| TAACAAGTTCCTCTTTATCA+GGG | 0.541380 | 4.4:-16234129 | None:intergenic |
| TTGAAAAGTAGAACTGGTGC+AGG | 0.545990 | 4.4:+16237281 | MS.gene09053:CDS |
| GATAATAGAAAATCTCTTGG+TGG | 0.550624 | 4.4:+16234582 | MS.gene09053:CDS |
| ACAAAAGAAATGAACCTTGG+TGG | 0.550976 | 4.4:+16236838 | MS.gene09053:CDS |
| CGACAAAGTTTAATAAATGG+AGG | 0.552738 | 4.4:+16236038 | MS.gene09053:CDS |
| TAAATTCTCTACTAGACTTG+AGG | 0.557721 | 4.4:+16237217 | MS.gene09053:CDS |
| TTACAGGAGATAGATTTGCT+TGG | 0.559693 | 4.4:+16235101 | MS.gene09053:intron |
| TCCTCATACGCGCTATACAA+TGG | 0.560220 | 4.4:+16235998 | MS.gene09053:CDS |
| TTGGTAATGAGAATAGCAGC+TGG | 0.560990 | 4.4:-16233612 | None:intergenic |
| TTGCTAAGCACAAGGGGAAG+CGG | 0.561266 | 4.4:+16234034 | MS.gene09053:CDS |
| TTTGTTATTGCTGATTCTGG+AGG | 0.561343 | 4.4:-16235313 | None:intergenic |
| AGAGGAAAGCTTATGCCTCC+CGG | 0.561811 | 4.4:+16235560 | MS.gene09053:CDS |
| GGAGGCATAAGCTTTCCTCT+CGG | 0.565442 | 4.4:-16235557 | None:intergenic |
| GACTACCCTTATGCTGCAGA+TGG | 0.565485 | 4.4:+16236681 | MS.gene09053:CDS |
| TGTAATGAAGAGAATCGTCC+GGG | 0.566537 | 4.4:-16235578 | None:intergenic |
| TCCAGTGTGCTGTGGCATCA+TGG | 0.566754 | 4.4:-16235690 | None:intergenic |
| GTTAAGGACTCATGCATGCA+TGG | 0.567574 | 4.4:+16235911 | MS.gene09053:CDS |
| ACTTCAAGCTACCAAAGTAA+TGG | 0.567833 | 4.4:+16237085 | MS.gene09053:CDS |
| GAATGTGCTTTCCAGGGGCA+TGG | 0.568313 | 4.4:+16236611 | MS.gene09053:intron |
| TGCGGGACAACGAATTTGCA+AGG | 0.570627 | 4.4:+16235125 | MS.gene09053:CDS |
| TGGGTCCTCCAGTGAAGCCG+TGG | 0.572006 | 4.4:-16233674 | None:intergenic |
| ATACCAGGTGGTGTTTGTGA+TGG | 0.574236 | 4.4:-16233989 | None:intergenic |
| GGAAGACCTCCTACTCGCTC+CGG | 0.576419 | 4.4:+16234202 | MS.gene09053:CDS |
| TGGAATCTTACGTAGGAGGT+TGG | 0.578287 | 4.4:+16233514 | MS.gene09053:CDS |
| GACAAAGTTTAATAAATGGA+GGG | 0.578318 | 4.4:+16236039 | MS.gene09053:CDS |
| GGGTTGCCTAACTCATTGTA+GGG | 0.579957 | 4.4:-16234109 | None:intergenic |
| ATCCTCCACGGCTTCACTGG+AGG | 0.580284 | 4.4:+16233669 | MS.gene09053:CDS |
| AGCTATAGGACGCAGAACAC+CGG | 0.590530 | 4.4:-16235605 | None:intergenic |
| TAGGCACATATCCTCCAAAA+GGG | 0.592242 | 4.4:-16236956 | None:intergenic |
| ACTCTACCGGAGCGAGTAGG+AGG | 0.596562 | 4.4:-16234208 | None:intergenic |
| TTTACACTGACAGGCTATGG+AGG | 0.600987 | 4.4:+16235465 | MS.gene09053:intron |
| CAAGTTTGGGTATGAGATTG+TGG | 0.602086 | 4.4:-16234459 | None:intergenic |
| TGCGGCAAAGTAAGTGTCTG+AGG | 0.602592 | 4.4:-16235643 | None:intergenic |
| GACGATTCTCTTCATTACAA+AGG | 0.603810 | 4.4:+16235582 | MS.gene09053:CDS |
| CTGACAAAAGAAATGAACCT+TGG | 0.604053 | 4.4:+16236835 | MS.gene09053:CDS |
| CAGCAGCTTACAAGAGCATG+TGG | 0.604299 | 4.4:+16236114 | MS.gene09053:CDS |
| TGGTAATGAGAATAGCAGCT+GGG | 0.604515 | 4.4:-16233611 | None:intergenic |
| GCCATGATGCCACAGCACAC+TGG | 0.604888 | 4.4:+16235689 | MS.gene09053:CDS |
| AGCTGCTGAACTAAGCTCCA+AGG | 0.606766 | 4.4:-16236099 | None:intergenic |
| CAAAGTTTAATAAATGGAGG+GGG | 0.611294 | 4.4:+16236041 | MS.gene09053:CDS |
| TTACCATCACAAACACCACC+TGG | 0.612280 | 4.4:+16233986 | MS.gene09053:CDS |
| AGCGTGGAATCTTACGTAGG+AGG | 0.612694 | 4.4:+16233510 | MS.gene09053:CDS |
| GACCCAAATACTCTTCGTCA+GGG | 0.617656 | 4.4:-16237136 | None:intergenic |
| GTGAGGATTTGCTAAGCACA+AGG | 0.617992 | 4.4:+16234026 | MS.gene09053:CDS |
| TCTTCAAAAGTTTCATCTCG+CGG | 0.618364 | 4.4:-16234391 | None:intergenic |
| ATGTTGAGCTCCAAGAGTGG+TGG | 0.620332 | 4.4:+16236787 | MS.gene09053:CDS |
| GTTGCTCCGGGTCCTGACAA+AGG | 0.621179 | 4.4:-16237329 | None:intergenic |
| CTTCCAAATCCAGTGTGCTG+TGG | 0.622388 | 4.4:-16235698 | None:intergenic |
| GCTGGGGATCCAAAGTCACT+TGG | 0.625360 | 4.4:-16233594 | None:intergenic |
| TTATCGGAAATCATCCTCCA+CGG | 0.626060 | 4.4:+16233657 | MS.gene09053:CDS |
| CTACTGGAGCAAGAACTTGG+TGG | 0.628297 | 4.4:+16235340 | MS.gene09053:CDS |
| ATCATATAGATATACTGTTG+GGG | 0.629144 | 4.4:-16237364 | None:intergenic |
| TTACACCACAGGGCATTGAA+GGG | 0.629797 | 4.4:-16236644 | None:intergenic |
| TTCCGGCAGATCTTATTCGG+AGG | 0.631003 | 4.4:+16236156 | MS.gene09053:CDS |
| ATCTCCGAGAAACACTTGAA+AGG | 0.632975 | 4.4:-16234508 | None:intergenic |
| GAGGATTTGCTAAGCACAAG+GGG | 0.634095 | 4.4:+16234028 | MS.gene09053:CDS |
| TATCAAAGATCTTCGGCGTG+AGG | 0.635500 | 4.4:+16234009 | MS.gene09053:CDS |
| TCAATTCTAGTCTCACATCG+TGG | 0.638934 | 4.4:-16234346 | None:intergenic |
| GGAAGCAAAAGTTCATAAGG+AGG | 0.642933 | 4.4:-16237308 | None:intergenic |
| GTCCTCCAGTGAAGCCGTGG+AGG | 0.643200 | 4.4:-16233671 | None:intergenic |
| AGGTCTTCAGTTCTGGAGAG+CGG | 0.643829 | 4.4:+16234620 | MS.gene09053:CDS |
| CATCTCGCGGCACATAAACA+GGG | 0.644374 | 4.4:-16234378 | None:intergenic |
| CGGATGTTGAGCTCCAAGAG+TGG | 0.647233 | 4.4:+16236784 | MS.gene09053:CDS |
| AATGTCTGAATTCGCCATAG+TGG | 0.648310 | 4.4:-16234485 | None:intergenic |
| TGGAGTGAAATCAAGTGTAA+GGG | 0.653346 | 4.4:+16236807 | MS.gene09053:CDS |
| ACCCAAATACTCTTCGTCAG+GGG | 0.656711 | 4.4:-16237135 | None:intergenic |
| GTATCTAGTTTAGGCCACCA+AGG | 0.657149 | 4.4:-16236852 | None:intergenic |
| TCCAGAATCAGCAATAACAA+AGG | 0.658477 | 4.4:+16235315 | MS.gene09053:CDS |
| GGTAATGAGAATAGCAGCTG+GGG | 0.660706 | 4.4:-16233610 | None:intergenic |
| AGATGAACTCTTTGCCCGAG+AGG | 0.664250 | 4.4:+16235542 | MS.gene09053:CDS |
| TGAGGATTTGCTAAGCACAA+GGG | 0.666301 | 4.4:+16234027 | MS.gene09053:CDS |
| TGAACTCTACCGGAGCGAGT+AGG | 0.669590 | 4.4:-16234211 | None:intergenic |
| AATAGAAAAGTTTACACACA+AGG | 0.676340 | 4.4:+16235667 | MS.gene09053:CDS |
| TAGTTGGATCTAGTTTGCTG+CGG | 0.682588 | 4.4:-16235282 | None:intergenic |
| TGAATGGCAAAAGCATGTCA+TGG | 0.684212 | 4.4:-16235513 | None:intergenic |
| GCCTAAACTAGATACCAAAG+AGG | 0.696249 | 4.4:+16236860 | MS.gene09053:CDS |
| CGAAGATCTTTGATACCAGG+TGG | 0.696678 | 4.4:-16234001 | None:intergenic |
| AATGAAGAGAATCGTCCGGG+AGG | 0.719002 | 4.4:-16235575 | None:intergenic |
| AAAAGCGTGGAATCTTACGT+AGG | 0.726945 | 4.4:+16233507 | MS.gene09053:CDS |
| CTTCCGGTTCTACAGCGACG+AGG | 0.730830 | 4.4:-16234184 | None:intergenic |
| GAAGACCCTTCAATGCCCTG+TGG | 0.756949 | 4.4:+16236639 | MS.gene09053:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATAATAAATAATATATGA+TGG | - | chr4.4:16236395-16236414 | None:intergenic | 10.0% |
| !! | AATTATAAATGCAAGAAATA+AGG | + | chr4.4:16237250-16237269 | MS.gene09053:CDS | 15.0% |
| !! | ATAAAAAATGTAACACAATT+AGG | + | chr4.4:16236422-16236441 | MS.gene09053:intron | 15.0% |
| !! | TAAAAAATGTAACACAATTA+GGG | + | chr4.4:16236423-16236442 | MS.gene09053:intron | 15.0% |
| !!! | TTTTCTTACTTTTTTTTTTG+TGG | + | chr4.4:16234238-16234257 | MS.gene09053:intron | 15.0% |
| !! | AAAAAATGTAACACAATTAG+GGG | + | chr4.4:16236424-16236443 | MS.gene09053:intron | 20.0% |
| !! | ACAAAGTTATATTGTATTCA+AGG | - | chr4.4:16235035-16235054 | None:intergenic | 20.0% |
| !! | AGAATTTACTAAACAATTTC+AGG | - | chr4.4:16237205-16237224 | None:intergenic | 20.0% |
| !! | ATGCAATTGAAAATTTGAAA+CGG | + | chr4.4:16236469-16236488 | MS.gene09053:intron | 20.0% |
| !! | CAAAACCTAAAAATTCAAAA+TGG | - | chr4.4:16234266-16234285 | None:intergenic | 20.0% |
| !! | TCAACTTGAAACTAAAATTT+GGG | - | chr4.4:16234832-16234851 | None:intergenic | 20.0% |
| !! | TTCAACTTGAAACTAAAATT+TGG | - | chr4.4:16234833-16234852 | None:intergenic | 20.0% |
| !!! | CATTTTGAATTTTTAGGTTT+TGG | + | chr4.4:16234264-16234283 | MS.gene09053:intron | 20.0% |
| !!! | CTTTTTTATTCATACCAATT+AGG | + | chr4.4:16235201-16235220 | MS.gene09053:intron | 20.0% |
| !!! | TATATTGATGGTGTTAATTT+GGG | + | chr4.4:16234541-16234560 | MS.gene09053:CDS | 20.0% |
| !!! | TATTAACAGATTGCTATTAA+AGG | - | chr4.4:16236584-16236603 | None:intergenic | 20.0% |
| !!! | TTATATTGATGGTGTTAATT+TGG | + | chr4.4:16234540-16234559 | MS.gene09053:CDS | 20.0% |
| ! | AACAAAGGTTGAACTTAAAA+TGG | - | chr4.4:16236542-16236561 | None:intergenic | 25.0% |
| ! | AATAGAAAAGTTTACACACA+AGG | + | chr4.4:16235667-16235686 | MS.gene09053:CDS | 25.0% |
| ! | AATATGTAATATGCAGGTTA+AGG | + | chr4.4:16235895-16235914 | MS.gene09053:intron | 25.0% |
| ! | AATGACTTGATCAAAAGAAA+TGG | + | chr4.4:16235828-16235847 | MS.gene09053:intron | 25.0% |
| ! | AATGATACCATATTCATGAA+TGG | - | chr4.4:16236257-16236276 | None:intergenic | 25.0% |
| ! | ACAAACAAACAAACAAAACA+TGG | - | chr4.4:16235389-16235408 | None:intergenic | 25.0% |
| ! | ACAAAGTTTAATAAATGGAG+GGG | + | chr4.4:16236040-16236059 | MS.gene09053:CDS | 25.0% |
| ! | AGTAAATATTGAGCTATTGA+AGG | + | chr4.4:16235171-16235190 | MS.gene09053:CDS | 25.0% |
| ! | ATAATAGAAAATCTCTTGGT+GGG | + | chr4.4:16234583-16234602 | MS.gene09053:CDS | 25.0% |
| ! | CAACTTGAAACTAAAATTTG+GGG | - | chr4.4:16234831-16234850 | None:intergenic | 25.0% |
| ! | CTATGAGTAGCAATTATATA+TGG | - | chr4.4:16235939-16235958 | None:intergenic | 25.0% |
| ! | GACAAAGTTTAATAAATGGA+GGG | + | chr4.4:16236039-16236058 | MS.gene09053:CDS | 25.0% |
| ! | TAAAAAAAATGTGACTCATG+AGG | - | chr4.4:16234994-16235013 | None:intergenic | 25.0% |
| ! | TAAATCATTGGTAAGACAAT+TGG | + | chr4.4:16235770-16235789 | MS.gene09053:intron | 25.0% |
| ! | TATATATGTCCTATGAACAA+AGG | - | chr4.4:16236557-16236576 | None:intergenic | 25.0% |
| ! | TGAAACCAAACATGTTAAAA+AGG | + | chr4.4:16234949-16234968 | MS.gene09053:intron | 25.0% |
| ! | TGAATATGATTCTACTTTGA+GGG | - | chr4.4:16233743-16233762 | None:intergenic | 25.0% |
| ! | TTAACCTGCATATTACATAT+TGG | - | chr4.4:16235896-16235915 | None:intergenic | 25.0% |
| ! | TTCAATAGCTCAATATTTAC+TGG | - | chr4.4:16235172-16235191 | None:intergenic | 25.0% |
| ! | TTCATCAACTAGTAAATCAT+TGG | + | chr4.4:16235758-16235777 | MS.gene09053:CDS | 25.0% |
| ! | TTGAATATGATTCTACTTTG+AGG | - | chr4.4:16233744-16233763 | None:intergenic | 25.0% |
| !! | AATCAGAATCATTTTCTTGA+GGG | - | chr4.4:16237010-16237029 | None:intergenic | 25.0% |
| !! | ATTGACAAGCTTTATATTGA+TGG | + | chr4.4:16234529-16234548 | MS.gene09053:CDS | 25.0% |
| !! | CAATTCTTCATGTCTAAAAT+CGG | + | chr4.4:16234908-16234927 | MS.gene09053:intron | 25.0% |
| !! | GTGTAAACTTTTCTATTTTG+CGG | - | chr4.4:16235664-16235683 | None:intergenic | 25.0% |
| !! | TAATCAGAATCATTTTCTTG+AGG | - | chr4.4:16237011-16237030 | None:intergenic | 25.0% |
| !!! | AACTTTTGAAGAAATCAAAC+AGG | + | chr4.4:16234402-16234421 | MS.gene09053:CDS | 25.0% |
| !!! | CACATTTTTTTTACTGTACT+AGG | + | chr4.4:16235001-16235020 | MS.gene09053:intron | 25.0% |
| !!! | TAGACATGAAGAATTGATTT+TGG | - | chr4.4:16234904-16234923 | None:intergenic | 25.0% |
| AAACTAGATCCAACTATCTA+TGG | + | chr4.4:16235289-16235308 | MS.gene09053:CDS | 30.0% | |
| AAAGGAAGCAAAAGTTCATA+AGG | - | chr4.4:16237314-16237333 | None:intergenic | 30.0% | |
| AACAACATGCTAAGTTAAGT+TGG | - | chr4.4:16233940-16233959 | None:intergenic | 30.0% | |
| AACATGCTGCTATAAATTTC+GGG | + | chr4.4:16236928-16236947 | MS.gene09053:CDS | 30.0% | |
| AACATTGCTTGATATCTCTT+TGG | + | chr4.4:16236201-16236220 | MS.gene09053:intron | 30.0% | |
| ACAACATATGGAATGTTTGA+TGG | - | chr4.4:16233549-16233568 | None:intergenic | 30.0% | |
| AGAAAAAACATGAACTCTAC+CGG | - | chr4.4:16234224-16234243 | None:intergenic | 30.0% | |
| AGATTCTACCCATTCTTTAA+TGG | - | chr4.4:16236724-16236743 | None:intergenic | 30.0% | |
| AGGGATAATAGAAAATCTCT+TGG | + | chr4.4:16234579-16234598 | MS.gene09053:CDS | 30.0% | |
| ATCAAACATTCCATATGTTG+TGG | + | chr4.4:16233548-16233567 | MS.gene09053:CDS | 30.0% | |
| CAAAGTTTAATAAATGGAGG+GGG | + | chr4.4:16236041-16236060 | MS.gene09053:CDS | 30.0% | |
| CAACATGCTGCTATAAATTT+CGG | + | chr4.4:16236927-16236946 | MS.gene09053:CDS | 30.0% | |
| CAAGGAAAAATATCAAGATG+TGG | + | chr4.4:16236508-16236527 | MS.gene09053:intron | 30.0% | |
| CATAACATACACTTCTTCAA+AGG | - | chr4.4:16233913-16233932 | None:intergenic | 30.0% | |
| CATACTTACGACAATCATAT+GGG | + | chr4.4:16236893-16236912 | MS.gene09053:CDS | 30.0% | |
| CGAATCAAATTCAATTGCAT+CGG | + | chr4.4:16236764-16236783 | MS.gene09053:CDS | 30.0% | |
| CGACAAAGTTTAATAAATGG+AGG | + | chr4.4:16236038-16236057 | MS.gene09053:CDS | 30.0% | |
| CGATGCAATTGAATTTGATT+CGG | - | chr4.4:16236766-16236785 | None:intergenic | 30.0% | |
| GATAATAGAAAATCTCTTGG+TGG | + | chr4.4:16234582-16234601 | MS.gene09053:CDS | 30.0% | |
| GATGATAGGAAAAAAAGTTG+AGG | - | chr4.4:16237053-16237072 | None:intergenic | 30.0% | |
| GCTCGACAAAGTTTAATAAA+TGG | + | chr4.4:16236035-16236054 | MS.gene09053:CDS | 30.0% | |
| GTTGCACCAAAAAACAAATT+TGG | - | chr4.4:16234317-16234336 | None:intergenic | 30.0% | |
| TAAATTCTCTACTAGACTTG+AGG | + | chr4.4:16237217-16237236 | MS.gene09053:CDS | 30.0% | |
| TAACAAGTTCCTCTTTATCA+GGG | - | chr4.4:16234132-16234151 | None:intergenic | 30.0% | |
| TAAGTTCAACCTTTGTTCAT+AGG | + | chr4.4:16236545-16236564 | MS.gene09053:intron | 30.0% | |
| TAATCATTGGATCAATGATC+AGG | + | chr4.4:16237175-16237194 | MS.gene09053:CDS | 30.0% | |
| TCATACTTACGACAATCATA+TGG | + | chr4.4:16236892-16236911 | MS.gene09053:CDS | 30.0% | |
| TGACTCATTTGCATAATCAT+TGG | + | chr4.4:16237162-16237181 | MS.gene09053:CDS | 30.0% | |
| TTCAAAGGAGTTCCATTTAT+CGG | + | chr4.4:16233641-16233660 | MS.gene09053:CDS | 30.0% | |
| TTGTCGTAAGTATGAAAGAT+AGG | - | chr4.4:16236887-16236906 | None:intergenic | 30.0% | |
| ! | AAACATGTTAAAAAGGCATG+CGG | + | chr4.4:16234956-16234975 | MS.gene09053:intron | 30.0% |
| ! | TACTAATAATGGAAAAAGCG+TGG | + | chr4.4:16233494-16233513 | MS.gene09053:CDS | 30.0% |
| ! | TGATTTTCTTTCCTGTTCTT+GGG | - | chr4.4:16234065-16234084 | None:intergenic | 30.0% |
| ! | TTTGAAACGGTTCCTATAAA+AGG | + | chr4.4:16236482-16236501 | MS.gene09053:intron | 30.0% |
| ! | TTTTCACAGTACTACTTACT+TGG | - | chr4.4:16233770-16233789 | None:intergenic | 30.0% |
| ! | TTTTGTTGCATGGATTTGAT+AGG | + | chr4.4:16233958-16233977 | MS.gene09053:intron | 30.0% |
| !! | AACATGTTTGGTTTCACTTT+TGG | - | chr4.4:16234945-16234964 | None:intergenic | 30.0% |
| !!! | AGTGCTCCAAATTTGTTTTT+TGG | + | chr4.4:16234308-16234327 | MS.gene09053:intron | 30.0% |
| !!! | CAATTACTTTTTACACTGAC+AGG | + | chr4.4:16235456-16235475 | MS.gene09053:intron | 30.0% |
| !!! | TGGTGCCATTTTGAATTTTT+AGG | + | chr4.4:16234258-16234277 | MS.gene09053:intron | 30.0% |
| ACAAAAGAAATGAACCTTGG+TGG | + | chr4.4:16236838-16236857 | MS.gene09053:CDS | 35.0% | |
| ACTACCTCCATTCATGAATA+TGG | + | chr4.4:16236247-16236266 | MS.gene09053:intron | 35.0% | |
| ACTTCAAGCTACCAAAGTAA+TGG | + | chr4.4:16237085-16237104 | MS.gene09053:CDS | 35.0% | |
| AGAGAAAGCTCAATAGCTAT+AGG | - | chr4.4:16235622-16235641 | None:intergenic | 35.0% | |
| AGCAATAACAAAGGAACTAC+TGG | + | chr4.4:16235324-16235343 | MS.gene09053:CDS | 35.0% | |
| AGCAATCTGTTAATACTCTG+TGG | + | chr4.4:16236589-16236608 | MS.gene09053:intron | 35.0% | |
| AGTGCCAATATGTAATATGC+AGG | + | chr4.4:16235889-16235908 | MS.gene09053:intron | 35.0% | |
| ATCTCCTGTAACAATGCAAA+AGG | - | chr4.4:16235092-16235111 | None:intergenic | 35.0% | |
| ATTCTCTTCATTACAAAGGC+CGG | + | chr4.4:16235586-16235605 | MS.gene09053:CDS | 35.0% | |
| ATTTGATATGGAGTCTCTTC+CGG | + | chr4.4:16236139-16236158 | MS.gene09053:CDS | 35.0% | |
| CATGAGTATCCAACTATTGA+AGG | + | chr4.4:16235230-16235249 | MS.gene09053:intron | 35.0% | |
| CATTACCAATCTTCGTTCAA+AGG | + | chr4.4:16233626-16233645 | MS.gene09053:CDS | 35.0% | |
| CCAAAAACACCTTCAATAGT+TGG | - | chr4.4:16235242-16235261 | None:intergenic | 35.0% | |
| CCAAGTTTGAAAAGTAGAAC+TGG | + | chr4.4:16237275-16237294 | MS.gene09053:CDS | 35.0% | |
| CTAACAAGTTCCTCTTTATC+AGG | - | chr4.4:16234133-16234152 | None:intergenic | 35.0% | |
| CTGACAAAAGAAATGAACCT+TGG | + | chr4.4:16236835-16236854 | MS.gene09053:CDS | 35.0% | |
| GACGATTCTCTTCATTACAA+AGG | + | chr4.4:16235582-16235601 | MS.gene09053:CDS | 35.0% | |
| GAGTTCATCTTCTTGATGAA+TGG | - | chr4.4:16235532-16235551 | None:intergenic | 35.0% | |
| GATACCATATTCATGAATGG+AGG | - | chr4.4:16236254-16236273 | None:intergenic | 35.0% | |
| GGATGTAGCAACTTGTAAAT+AGG | - | chr4.4:16235981-16236000 | None:intergenic | 35.0% | |
| GTGTTAGCTGGAAAGAAAAT+GGG | - | chr4.4:16233696-16233715 | None:intergenic | 35.0% | |
| TACTCATGTAACTGCCTAAT+TGG | - | chr4.4:16235218-16235237 | None:intergenic | 35.0% | |
| TATCTCCTGAAGTGTAAACT+TGG | - | chr4.4:16236356-16236375 | None:intergenic | 35.0% | |
| TATGAAAGATAGGTCCTCTT+TGG | - | chr4.4:16236877-16236896 | None:intergenic | 35.0% | |
| TCCAGAATCAGCAATAACAA+AGG | + | chr4.4:16235315-16235334 | MS.gene09053:CDS | 35.0% | |
| TCTTCAAAAGTTTCATCTCG+CGG | - | chr4.4:16234394-16234413 | None:intergenic | 35.0% | |
| TGGAGTGAAATCAAGTGTAA+GGG | + | chr4.4:16236807-16236826 | MS.gene09053:CDS | 35.0% | |
| TGGGAGATGAAGAGAATAAA+GGG | + | chr4.4:16234560-16234579 | MS.gene09053:CDS | 35.0% | |
| TGTGTTAGCTGGAAAGAAAA+TGG | - | chr4.4:16233697-16233716 | None:intergenic | 35.0% | |
| TTGGGAGATGAAGAGAATAA+AGG | + | chr4.4:16234559-16234578 | MS.gene09053:CDS | 35.0% | |
| TTGTAATGAAGAGAATCGTC+CGG | - | chr4.4:16235582-16235601 | None:intergenic | 35.0% | |
| ! | AATCACAAGTTTTACACCAC+AGG | - | chr4.4:16236658-16236677 | None:intergenic | 35.0% |
| ! | AGCATACCTTTTACAATAGC+TGG | - | chr4.4:16234664-16234683 | None:intergenic | 35.0% |
| ! | AGGGATAAGTTTTCTCATGA+GGG | - | chr4.4:16236991-16237010 | None:intergenic | 35.0% |
| ! | ATAAGTTTTCTCATGAGGGT+AGG | - | chr4.4:16236987-16237006 | None:intergenic | 35.0% |
| ! | ATCACAAGTTTTACACCACA+GGG | - | chr4.4:16236657-16236676 | None:intergenic | 35.0% |
| ! | CATTCCTTTCAAGTGTTTCT+CGG | + | chr4.4:16234504-16234523 | MS.gene09053:CDS | 35.0% |
| ! | CTTGTTTGTTAGTATACACG+TGG | - | chr4.4:16233872-16233891 | None:intergenic | 35.0% |
| ! | GCATACCTTTTACAATAGCT+GGG | - | chr4.4:16234663-16234682 | None:intergenic | 35.0% |
| ! | GCATGCCTTTTTAACATGTT+TGG | - | chr4.4:16234957-16234976 | None:intergenic | 35.0% |
| ! | GTGATTTTCTTTCCTGTTCT+TGG | - | chr4.4:16234066-16234085 | None:intergenic | 35.0% |
| ! | GTTTTCCAAGTTTACACTTC+AGG | + | chr4.4:16236348-16236367 | MS.gene09053:intron | 35.0% |
| ! | TATGGAATGTTTGATGGCTT+CGG | - | chr4.4:16233543-16233562 | None:intergenic | 35.0% |
| ! | TCCTCTTTGGTATCTAGTTT+AGG | - | chr4.4:16236864-16236883 | None:intergenic | 35.0% |
| ! | TTACAGGAGATAGATTTGCT+TGG | + | chr4.4:16235101-16235120 | MS.gene09053:intron | 35.0% |
| ! | TTTTCCTTGCCACCTTTTAT+AGG | - | chr4.4:16236497-16236516 | None:intergenic | 35.0% |
| ! | TTTTCTTTCCAGCTAACACA+TGG | + | chr4.4:16233697-16233716 | MS.gene09053:CDS | 35.0% |
| !! | CCAGTTCTACTTTTCAAACT+TGG | - | chr4.4:16237278-16237297 | None:intergenic | 35.0% |
| !! | TCCTTTGTTATTGCTGATTC+TGG | - | chr4.4:16235319-16235338 | None:intergenic | 35.0% |
| !! | TTGTTATTGCTGATTCTGGA+GGG | - | chr4.4:16235315-16235334 | None:intergenic | 35.0% |
| !! | TTTGTTATTGCTGATTCTGG+AGG | - | chr4.4:16235316-16235335 | None:intergenic | 35.0% |
| !!! | CCAACTATTGAAGGTGTTTT+TGG | + | chr4.4:16235239-16235258 | MS.gene09053:intron | 35.0% |
| !!! | TAGCATGTTGTTTTGTTGCA+TGG | + | chr4.4:16233948-16233967 | MS.gene09053:intron | 35.0% |
| AATGTCTGAATTCGCCATAG+TGG | - | chr4.4:16234488-16234507 | None:intergenic | 40.0% | |
| ATCTCCGAGAAACACTTGAA+AGG | - | chr4.4:16234511-16234530 | None:intergenic | 40.0% | |
| ATGAAACAGGTCTTCAGTTC+TGG | + | chr4.4:16234613-16234632 | MS.gene09053:CDS | 40.0% | |
| CAAGTTTGGGTATGAGATTG+TGG | - | chr4.4:16234462-16234481 | None:intergenic | 40.0% | |
| CACCTGGTATCAAAGATCTT+CGG | + | chr4.4:16234002-16234021 | MS.gene09053:CDS | 40.0% | |
| CATGTTAGCTCAAATGATGC+TGG | + | chr4.4:16235733-16235752 | MS.gene09053:CDS | 40.0% | |
| CTGGTCTGCCATTAAAGAAT+GGG | + | chr4.4:16236713-16236732 | MS.gene09053:CDS | 40.0% | |
| CTGTAACAATGCAAAAGGAC+TGG | - | chr4.4:16235087-16235106 | None:intergenic | 40.0% | |
| GAAACGGTTCCTATAAAAGG+TGG | + | chr4.4:16236485-16236504 | MS.gene09053:intron | 40.0% | |
| GAACTCCTTTGAACGAAGAT+TGG | - | chr4.4:16233634-16233653 | None:intergenic | 40.0% | |
| GAATGAATCCATGTGTTAGC+TGG | - | chr4.4:16233708-16233727 | None:intergenic | 40.0% | |
| GACATCCCAGCTATTGTAAA+AGG | + | chr4.4:16234655-16234674 | MS.gene09053:CDS | 40.0% | |
| GAGCATGTGGAGATTTGATA+TGG | + | chr4.4:16236127-16236146 | MS.gene09053:CDS | 40.0% | |
| GCCTAAACTAGATACCAAAG+AGG | + | chr4.4:16236860-16236879 | MS.gene09053:CDS | 40.0% | |
| GGAAGCAAAAGTTCATAAGG+AGG | - | chr4.4:16237311-16237330 | None:intergenic | 40.0% | |
| GGAGGATGATTTCCGATAAA+TGG | - | chr4.4:16233656-16233675 | None:intergenic | 40.0% | |
| GTGGAGTGAAATCAAGTGTA+AGG | + | chr4.4:16236806-16236825 | MS.gene09053:CDS | 40.0% | |
| GTTGAGTAGGCAATGATGAT+AGG | - | chr4.4:16237067-16237086 | None:intergenic | 40.0% | |
| TACCAAAGTAATGGCTGTTC+AGG | + | chr4.4:16237094-16237113 | MS.gene09053:CDS | 40.0% | |
| TACTAGACTTGAGGAGATAG+AGG | + | chr4.4:16237226-16237245 | MS.gene09053:CDS | 40.0% | |
| TAGGCACATATCCTCCAAAA+GGG | - | chr4.4:16236959-16236978 | None:intergenic | 40.0% | |
| TAGTCCTGGAAAATATGCCT+TGG | + | chr4.4:16236082-16236101 | MS.gene09053:CDS | 40.0% | |
| TATGCTCCCTACAATGAGTT+AGG | + | chr4.4:16234103-16234122 | MS.gene09053:CDS | 40.0% | |
| TCAATTCTAGTCTCACATCG+TGG | - | chr4.4:16234349-16234368 | None:intergenic | 40.0% | |
| TCTGGTCTGCCATTAAAGAA+TGG | + | chr4.4:16236712-16236731 | MS.gene09053:CDS | 40.0% | |
| TGGTGGAATAAGCTTGGAAA+AGG | + | chr4.4:16235357-16235376 | MS.gene09053:CDS | 40.0% | |
| TGTAATGAAGAGAATCGTCC+GGG | - | chr4.4:16235581-16235600 | None:intergenic | 40.0% | |
| TTAGGCACATATCCTCCAAA+AGG | - | chr4.4:16236960-16236979 | None:intergenic | 40.0% | |
| TTATCGGAAATCATCCTCCA+CGG | + | chr4.4:16233657-16233676 | MS.gene09053:CDS | 40.0% | |
| TTGAAAAGTAGAACTGGTGC+AGG | + | chr4.4:16237281-16237300 | MS.gene09053:CDS | 40.0% | |
| ! | AAAAGCGTGGAATCTTACGT+AGG | + | chr4.4:16233507-16233526 | MS.gene09053:CDS | 40.0% |
| ! | AATTTCGGGCAATACCCTTT+TGG | + | chr4.4:16236942-16236961 | MS.gene09053:CDS | 40.0% |
| ! | ACAATCATATGGGTTGCTTC+AGG | + | chr4.4:16236903-16236922 | MS.gene09053:CDS | 40.0% |
| ! | AGAACTTGGTGGAATAAGCT+TGG | + | chr4.4:16235351-16235370 | MS.gene09053:CDS | 40.0% |
| ! | AGATAGATTTGCTTGGTTGC+GGG | + | chr4.4:16235108-16235127 | MS.gene09053:CDS | 40.0% |
| ! | CAGTCCTTTTGCATTGTTAC+AGG | + | chr4.4:16235085-16235104 | MS.gene09053:intron | 40.0% |
| ! | CTTTTTACACTGACAGGCTA+TGG | + | chr4.4:16235462-16235481 | MS.gene09053:intron | 40.0% |
| ! | GAACTTTTGCTTCCTTTGTC+AGG | + | chr4.4:16237317-16237336 | MS.gene09053:CDS | 40.0% |
| ! | GAGATAGATTTGCTTGGTTG+CGG | + | chr4.4:16235107-16235126 | MS.gene09053:CDS | 40.0% |
| ! | GAGGGATAAGTTTTCTCATG+AGG | - | chr4.4:16236992-16237011 | None:intergenic | 40.0% |
| ! | GCAGAGTATTCCACAACATA+TGG | - | chr4.4:16233561-16233580 | None:intergenic | 40.0% |
| ! | TAACACAATTAGGGGCATGT+TGG | + | chr4.4:16236432-16236451 | MS.gene09053:intron | 40.0% |
| ! | TGAATGGCAAAAGCATGTCA+TGG | - | chr4.4:16235516-16235535 | None:intergenic | 40.0% |
| ! | TGGTAATGAGAATAGCAGCT+GGG | - | chr4.4:16233614-16233633 | None:intergenic | 40.0% |
| ! | TTGGTAGCTTGAAGTTGAGT+AGG | - | chr4.4:16237080-16237099 | None:intergenic | 40.0% |
| !! | ACTGGTTTGTTGAATGAACG+TGG | - | chr4.4:16235069-16235088 | None:intergenic | 40.0% |
| !! | ATTGAAGCGTCTTTTAGTCC+TGG | + | chr4.4:16236068-16236087 | MS.gene09053:CDS | 40.0% |
| !! | GAACTTGTTAGACCAGTCAT+TGG | + | chr4.4:16234142-16234161 | MS.gene09053:CDS | 40.0% |
| !! | TAGTTGGATCTAGTTTGCTG+CGG | - | chr4.4:16235285-16235304 | None:intergenic | 40.0% |
| !! | TGAGGATTTGCTAAGCACAA+GGG | + | chr4.4:16234027-16234046 | MS.gene09053:CDS | 40.0% |
| !! | TTGGTAATGAGAATAGCAGC+TGG | - | chr4.4:16233615-16233634 | None:intergenic | 40.0% |
| !!! | AAGGTGTTTTTGGTCTTTGC+AGG | + | chr4.4:16235249-16235268 | MS.gene09053:intron | 40.0% |
| ACCCAAATACTCTTCGTCAG+GGG | - | chr4.4:16237138-16237157 | None:intergenic | 45.0% | |
| AGAAGTCCATCTGCAGCATA+AGG | - | chr4.4:16236690-16236709 | None:intergenic | 45.0% | |
| AGGGTTGCCTAACTCATTGT+AGG | - | chr4.4:16234113-16234132 | None:intergenic | 45.0% | |
| ATACCAGGTGGTGTTTGTGA+TGG | - | chr4.4:16233992-16234011 | None:intergenic | 45.0% | |
| CGAAGATCTTTGATACCAGG+TGG | - | chr4.4:16234004-16234023 | None:intergenic | 45.0% | |
| CTCTCATGATCTCCAATGAC+TGG | - | chr4.4:16234157-16234176 | None:intergenic | 45.0% | |
| CTCTTCCGGCAGATCTTATT+CGG | + | chr4.4:16236153-16236172 | MS.gene09053:CDS | 45.0% | |
| GAACTACTGGAGCAAGAACT+TGG | + | chr4.4:16235337-16235356 | MS.gene09053:CDS | 45.0% | |
| GAAGTCCATCTGCAGCATAA+GGG | - | chr4.4:16236689-16236708 | None:intergenic | 45.0% | |
| GACCCAAATACTCTTCGTCA+GGG | - | chr4.4:16237139-16237158 | None:intergenic | 45.0% | |
| GGGTTGCCTAACTCATTGTA+GGG | - | chr4.4:16234112-16234131 | None:intergenic | 45.0% | |
| GGTAATGAGAATAGCAGCTG+GGG | - | chr4.4:16233613-16233632 | None:intergenic | 45.0% | |
| GGTGGGAAAAGTGATGAAAC+AGG | + | chr4.4:16234600-16234619 | MS.gene09053:CDS | 45.0% | |
| GGTTCCTATAAAAGGTGGCA+AGG | + | chr4.4:16236490-16236509 | MS.gene09053:intron | 45.0% | |
| GTATGCTACCTCTACTGCTT+AGG | + | chr4.4:16234677-16234696 | MS.gene09053:intron | 45.0% | |
| GTCCTGAACAGCCATTACTT+TGG | - | chr4.4:16237099-16237118 | None:intergenic | 45.0% | |
| GTTAAGGACTCATGCATGCA+TGG | + | chr4.4:16235911-16235930 | MS.gene09053:CDS | 45.0% | |
| GTTAGGCAACCCTGATAAAG+AGG | + | chr4.4:16234120-16234139 | MS.gene09053:CDS | 45.0% | |
| TACCTCCGAATAAGATCTGC+CGG | - | chr4.4:16236161-16236180 | None:intergenic | 45.0% | |
| TATCAAAGATCTTCGGCGTG+AGG | + | chr4.4:16234009-16234028 | MS.gene09053:CDS | 45.0% | |
| TCCATTGTATAGCGCGTATG+AGG | - | chr4.4:16236002-16236021 | None:intergenic | 45.0% | |
| TCCTCATACGCGCTATACAA+TGG | + | chr4.4:16235998-16236017 | MS.gene09053:CDS | 45.0% | |
| TCTGTGGAATGTGCTTTCCA+GGG | + | chr4.4:16236605-16236624 | MS.gene09053:intron | 45.0% | |
| TGACCCAAATACTCTTCGTC+AGG | - | chr4.4:16237140-16237159 | None:intergenic | 45.0% | |
| TGATTTCACTCCACCACTCT+TGG | - | chr4.4:16236800-16236819 | None:intergenic | 45.0% | |
| TGGAATCTTACGTAGGAGGT+TGG | + | chr4.4:16233514-16233533 | MS.gene09053:CDS | 45.0% | |
| TGTGTTTGCCTAAGCAGTAG+AGG | - | chr4.4:16234688-16234707 | None:intergenic | 45.0% | |
| TTACCATCACAAACACCACC+TGG | + | chr4.4:16233986-16234005 | MS.gene09053:CDS | 45.0% | |
| TTCACAGTGCCAAGTGACTT+TGG | + | chr4.4:16233585-16233604 | MS.gene09053:CDS | 45.0% | |
| TTTACACTGACAGGCTATGG+AGG | + | chr4.4:16235465-16235484 | MS.gene09053:intron | 45.0% | |
| ! | AAACAGGATGCATTTGCTGC+TGG | + | chr4.4:16234418-16234437 | MS.gene09053:CDS | 45.0% |
| ! | AGCTCCAAGGCATATTTTCC+AGG | - | chr4.4:16236089-16236108 | None:intergenic | 45.0% |
| ! | CACTTCTTCAAAGGTGTGTG+AGG | - | chr4.4:16233904-16233923 | None:intergenic | 45.0% |
| ! | CTGCAGATGGACTTCTAATC+TGG | + | chr4.4:16236694-16236713 | MS.gene09053:CDS | 45.0% |
| ! | GTATCTAGTTTAGGCCACCA+AGG | - | chr4.4:16236855-16236874 | None:intergenic | 45.0% |
| ! | GTTTTCTCATGAGGGTAGGA+CGG | - | chr4.4:16236983-16237002 | None:intergenic | 45.0% |
| ! | TACTGGATTGACTCCAGCTA+AGG | - | chr4.4:16235155-16235174 | None:intergenic | 45.0% |
| !! | GAGGATTTGCTAAGCACAAG+GGG | + | chr4.4:16234028-16234047 | MS.gene09053:CDS | 45.0% |
| !! | GTGAGGATTTGCTAAGCACA+AGG | + | chr4.4:16234026-16234045 | MS.gene09053:CDS | 45.0% |
| !! | TCCCCTGACGAAGAGTATTT+GGG | + | chr4.4:16237134-16237153 | MS.gene09053:CDS | 45.0% |
| !! | TTACACCACAGGGCATTGAA+GGG | - | chr4.4:16236647-16236666 | None:intergenic | 45.0% |
| !! | TTCCCCTGACGAAGAGTATT+TGG | + | chr4.4:16237133-16237152 | MS.gene09053:CDS | 45.0% |
| !! | TTTACACCACAGGGCATTGA+AGG | - | chr4.4:16236648-16236667 | None:intergenic | 45.0% |
| AATGAAGAGAATCGTCCGGG+AGG | - | chr4.4:16235578-16235597 | None:intergenic | 50.0% | |
| ACCCAAACTTGCAGCCACTA+TGG | + | chr4.4:16234471-16234490 | MS.gene09053:CDS | 50.0% | |
| AGAGGAAAGCTTATGCCTCC+CGG | + | chr4.4:16235560-16235579 | MS.gene09053:CDS | 50.0% | |
| AGATGAACTCTTTGCCCGAG+AGG | + | chr4.4:16235542-16235561 | MS.gene09053:CDS | 50.0% | |
| AGCGTGGAATCTTACGTAGG+AGG | + | chr4.4:16233510-16233529 | MS.gene09053:CDS | 50.0% | |
| AGCTATAGGACGCAGAACAC+CGG | - | chr4.4:16235608-16235627 | None:intergenic | 50.0% | |
| AGCTGCTGAACTAAGCTCCA+AGG | - | chr4.4:16236102-16236121 | None:intergenic | 50.0% | |
| ATGCCACAGCACACTGGATT+TGG | + | chr4.4:16235695-16235714 | MS.gene09053:CDS | 50.0% | |
| ATGTTGAGCTCCAAGAGTGG+TGG | + | chr4.4:16236787-16236806 | MS.gene09053:CDS | 50.0% | |
| CATCTCGCGGCACATAAACA+GGG | - | chr4.4:16234381-16234400 | None:intergenic | 50.0% | |
| CGCCGAAGATCTTTGATACC+AGG | - | chr4.4:16234007-16234026 | None:intergenic | 50.0% | |
| CTACTGGAGCAAGAACTTGG+TGG | + | chr4.4:16235340-16235359 | MS.gene09053:CDS | 50.0% | |
| CTCTGTGGAATGTGCTTTCC+AGG | + | chr4.4:16236604-16236623 | MS.gene09053:intron | 50.0% | |
| CTGTGGAATGTGCTTTCCAG+GGG | + | chr4.4:16236606-16236625 | MS.gene09053:intron | 50.0% | |
| CTTCCAAATCCAGTGTGCTG+TGG | - | chr4.4:16235701-16235720 | None:intergenic | 50.0% | |
| GACTACCCTTATGCTGCAGA+TGG | + | chr4.4:16236681-16236700 | MS.gene09053:CDS | 50.0% | |
| GAGGCATAAGCTTTCCTCTC+GGG | - | chr4.4:16235559-16235578 | None:intergenic | 50.0% | |
| GCCATAGTGGCTGCAAGTTT+GGG | - | chr4.4:16234475-16234494 | None:intergenic | 50.0% | |
| GTTCTACAGCGACGAGGATA+AGG | - | chr4.4:16234181-16234200 | None:intergenic | 50.0% | |
| TATCCTCGTCGCTGTAGAAC+CGG | + | chr4.4:16234181-16234200 | MS.gene09053:CDS | 50.0% | |
| TCATCTCGCGGCACATAAAC+AGG | - | chr4.4:16234382-16234401 | None:intergenic | 50.0% | |
| TCTGGAGGGCCATAGATAGT+TGG | - | chr4.4:16235301-16235320 | None:intergenic | 50.0% | |
| TGCGGCAAAGTAAGTGTCTG+AGG | - | chr4.4:16235646-16235665 | None:intergenic | 50.0% | |
| TGCGGGACAACGAATTTGCA+AGG | + | chr4.4:16235125-16235144 | MS.gene09053:CDS | 50.0% | |
| TTCCGGCAGATCTTATTCGG+AGG | + | chr4.4:16236156-16236175 | MS.gene09053:CDS | 50.0% | |
| TTGCTAAGCACAAGGGGAAG+CGG | + | chr4.4:16234034-16234053 | MS.gene09053:CDS | 50.0% | |
| TTGCTTCCTTTGTCAGGACC+CGG | + | chr4.4:16237323-16237342 | MS.gene09053:CDS | 50.0% | |
| TTTGCAAGGCAAGCCTTAGC+TGG | + | chr4.4:16235139-16235158 | MS.gene09053:CDS | 50.0% | |
| ! | CAGCAGCTTACAAGAGCATG+TGG | + | chr4.4:16236114-16236133 | MS.gene09053:CDS | 50.0% |
| ! | GGAGGCATAAGCTTTCCTCT+CGG | - | chr4.4:16235560-16235579 | None:intergenic | 50.0% |
| ! | TTCGGGCAATACCCTTTTGG+AGG | + | chr4.4:16236945-16236964 | MS.gene09053:CDS | 50.0% |
| !! | AGGTCTTCAGTTCTGGAGAG+CGG | + | chr4.4:16234620-16234639 | MS.gene09053:CDS | 50.0% |
| !! | GGATCTAGTTTGCTGCGGAT+TGG | - | chr4.4:16235280-16235299 | None:intergenic | 50.0% |
| ATCATCCTCCACGGCTTCAC+TGG | + | chr4.4:16233666-16233685 | MS.gene09053:CDS | 55.0% | |
| CGCCATAGTGGCTGCAAGTT+TGG | - | chr4.4:16234476-16234495 | None:intergenic | 55.0% | |
| CGGATGTTGAGCTCCAAGAG+TGG | + | chr4.4:16236784-16236803 | MS.gene09053:CDS | 55.0% | |
| CTCATGAGGGTAGGACGGTT+AGG | - | chr4.4:16236978-16236997 | None:intergenic | 55.0% | |
| GAAGACCCTTCAATGCCCTG+TGG | + | chr4.4:16236639-16236658 | MS.gene09053:CDS | 55.0% | |
| GAATGTGCTTTCCAGGGGCA+TGG | + | chr4.4:16236611-16236630 | MS.gene09053:intron | 55.0% | |
| GCTGGGGATCCAAAGTCACT+TGG | - | chr4.4:16233597-16233616 | None:intergenic | 55.0% | |
| TCCAGTGTGCTGTGGCATCA+TGG | - | chr4.4:16235693-16235712 | None:intergenic | 55.0% | |
| TGAACTCTACCGGAGCGAGT+AGG | - | chr4.4:16234214-16234233 | None:intergenic | 55.0% | |
| ACTCCACGACCAGTTGCTCC+GGG | - | chr4.4:16237344-16237363 | None:intergenic | 60.0% | |
| ACTCTACCGGAGCGAGTAGG+AGG | - | chr4.4:16234211-16234230 | None:intergenic | 60.0% | |
| ATCCTCCACGGCTTCACTGG+AGG | + | chr4.4:16233669-16233688 | MS.gene09053:CDS | 60.0% | |
| CGCGGCACATAAACAGGGTG+TGG | - | chr4.4:16234376-16234395 | None:intergenic | 60.0% | |
| CTTCCGGTTCTACAGCGACG+AGG | - | chr4.4:16234187-16234206 | None:intergenic | 60.0% | |
| GACTCCACGACCAGTTGCTC+CGG | - | chr4.4:16237345-16237364 | None:intergenic | 60.0% | |
| GCCATGATGCCACAGCACAC+TGG | + | chr4.4:16235689-16235708 | MS.gene09053:CDS | 60.0% | |
| GGAAGACCTCCTACTCGCTC+CGG | + | chr4.4:16234202-16234221 | MS.gene09053:CDS | 60.0% | |
| GGAGCGAGTAGGAGGTCTTC+CGG | - | chr4.4:16234203-16234222 | None:intergenic | 60.0% | |
| GTCTTCTACTGCCATGCCCC+TGG | - | chr4.4:16236625-16236644 | None:intergenic | 60.0% | |
| GTTGCTCCGGGTCCTGACAA+AGG | - | chr4.4:16237332-16237351 | None:intergenic | 60.0% | |
| TTGTCAGGACCCGGAGCAAC+TGG | + | chr4.4:16237332-16237351 | MS.gene09053:CDS | 60.0% | |
| !! | AAGCGGTGCTGCCCAAGAAC+AGG | + | chr4.4:16234051-16234070 | MS.gene09053:CDS | 60.0% |
| GTCCTCCAGTGAAGCCGTGG+AGG | - | chr4.4:16233674-16233693 | None:intergenic | 65.0% | |
| TGGGTCCTCCAGTGAAGCCG+TGG | - | chr4.4:16233677-16233696 | None:intergenic | 65.0% | |
| GGACCCGGAGCAACTGGTCG+TGG | + | chr4.4:16237338-16237357 | MS.gene09053:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 16233493 | 16237371 | 16233493 | ID=MS.gene09053 |
| chr4.4 | mRNA | 16233493 | 16237371 | 16233493 | ID=MS.gene09053.t1;Parent=MS.gene09053 |
| chr4.4 | exon | 16233493 | 16233770 | 16233493 | ID=MS.gene09053.t1.exon1;Parent=MS.gene09053.t1 |
| chr4.4 | CDS | 16233493 | 16233770 | 16233493 | ID=cds.MS.gene09053.t1;Parent=MS.gene09053.t1 |
| chr4.4 | exon | 16233980 | 16234223 | 16233980 | ID=MS.gene09053.t1.exon2;Parent=MS.gene09053.t1 |
| chr4.4 | CDS | 16233980 | 16234223 | 16233980 | ID=cds.MS.gene09053.t1;Parent=MS.gene09053.t1 |
| chr4.4 | exon | 16234344 | 16234676 | 16234344 | ID=MS.gene09053.t1.exon3;Parent=MS.gene09053.t1 |
| chr4.4 | CDS | 16234344 | 16234676 | 16234344 | ID=cds.MS.gene09053.t1;Parent=MS.gene09053.t1 |
| chr4.4 | exon | 16235107 | 16235192 | 16235107 | ID=MS.gene09053.t1.exon4;Parent=MS.gene09053.t1 |
| chr4.4 | CDS | 16235107 | 16235192 | 16235107 | ID=cds.MS.gene09053.t1;Parent=MS.gene09053.t1 |
| chr4.4 | exon | 16235271 | 16235378 | 16235271 | ID=MS.gene09053.t1.exon5;Parent=MS.gene09053.t1 |
| chr4.4 | CDS | 16235271 | 16235378 | 16235271 | ID=cds.MS.gene09053.t1;Parent=MS.gene09053.t1 |
| chr4.4 | exon | 16235478 | 16235779 | 16235478 | ID=MS.gene09053.t1.exon6;Parent=MS.gene09053.t1 |
| chr4.4 | CDS | 16235478 | 16235779 | 16235478 | ID=cds.MS.gene09053.t1;Parent=MS.gene09053.t1 |
| chr4.4 | exon | 16235911 | 16236177 | 16235911 | ID=MS.gene09053.t1.exon7;Parent=MS.gene09053.t1 |
| chr4.4 | CDS | 16235911 | 16236177 | 16235911 | ID=cds.MS.gene09053.t1;Parent=MS.gene09053.t1 |
| chr4.4 | exon | 16236626 | 16237371 | 16236626 | ID=MS.gene09053.t1.exon8;Parent=MS.gene09053.t1 |
| chr4.4 | CDS | 16236626 | 16237371 | 16236626 | ID=cds.MS.gene09053.t1;Parent=MS.gene09053.t1 |
| Gene Sequence |
| Protein sequence |
