Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066112.t1 | RHN70735.1 | 98.8 | 81 | 1 | 0 | 1 | 81 | 39 | 119 | 1.80E-36 | 161.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066112.t1 | Q9M088 | 70.9 | 79 | 23 | 0 | 3 | 81 | 37 | 115 | 1.8e-24 | 112.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066112.t1 | G7JCB1 | 98.8 | 81 | 1 | 0 | 1 | 81 | 39 | 119 | 1.3e-36 | 161.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene066112 | 0.805876 | 1.08E-49 | -1.69E-46 |
| MS.gene049159 | MS.gene066112 | 0.820628 | 6.20E-53 | -1.69E-46 |
| MS.gene049190 | MS.gene066112 | 0.803596 | 3.23E-49 | -1.69E-46 |
| MS.gene049341 | MS.gene066112 | 0.818818 | 1.61E-52 | -1.69E-46 |
| MS.gene049435 | MS.gene066112 | 0.81885 | 1.58E-52 | -1.69E-46 |
| MS.gene049501 | MS.gene066112 | 0.801686 | 8.01E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene066112 | 0.835165 | 1.97E-56 | -1.69E-46 |
| MS.gene049979 | MS.gene066112 | 0.822238 | 2.64E-53 | -1.69E-46 |
| MS.gene050020 | MS.gene066112 | 0.85965 | 3.57E-63 | -1.69E-46 |
| MS.gene05016 | MS.gene066112 | 0.80328 | 3.76E-49 | -1.69E-46 |
| MS.gene050438 | MS.gene066112 | 0.818228 | 2.19E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene066112 | 0.811785 | 5.89E-51 | -1.69E-46 |
| MS.gene050586 | MS.gene066112 | 0.81523 | 1.03E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene066112 | 0.857215 | 1.90E-62 | -1.69E-46 |
| MS.gene050808 | MS.gene066112 | 0.830212 | 3.33E-55 | -1.69E-46 |
| MS.gene050959 | MS.gene066112 | 0.825694 | 4.08E-54 | -1.69E-46 |
| MS.gene051247 | MS.gene066112 | 0.82115 | 4.70E-53 | -1.69E-46 |
| MS.gene051265 | MS.gene066112 | 0.80192 | 7.17E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene066112 | 0.808572 | 2.90E-50 | -1.69E-46 |
| MS.gene05157 | MS.gene066112 | 0.847616 | 1.03E-59 | -1.69E-46 |
| MS.gene051719 | MS.gene066112 | 0.835462 | 1.65E-56 | -1.69E-46 |
| MS.gene051720 | MS.gene066112 | 0.845576 | 3.73E-59 | -1.69E-46 |
| MS.gene052020 | MS.gene066112 | 0.858178 | 9.85E-63 | -1.69E-46 |
| MS.gene052133 | MS.gene066112 | 0.80791 | 4.01E-50 | -1.69E-46 |
| MS.gene052323 | MS.gene066112 | 0.818679 | 1.73E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene066112 | 0.831371 | 1.73E-55 | -1.69E-46 |
| MS.gene052611 | MS.gene066112 | 0.842719 | 2.18E-58 | -1.69E-46 |
| MS.gene052612 | MS.gene066112 | 0.82176 | 3.40E-53 | -1.69E-46 |
| MS.gene052613 | MS.gene066112 | 0.811305 | 7.48E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene066112 | 0.862589 | 4.55E-64 | -1.69E-46 |
| MS.gene052732 | MS.gene066112 | 0.809233 | 2.09E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene066112 | 0.817515 | 3.17E-52 | -1.69E-46 |
| MS.gene052896 | MS.gene066112 | 0.82182 | 3.29E-53 | -1.69E-46 |
| MS.gene053074 | MS.gene066112 | 0.808384 | 3.18E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene066112 | 0.826138 | 3.20E-54 | -1.69E-46 |
| MS.gene053174 | MS.gene066112 | 0.809462 | 1.87E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene066112 | 0.817557 | 3.10E-52 | -1.69E-46 |
| MS.gene053581 | MS.gene066112 | 0.810156 | 1.33E-50 | -1.69E-46 |
| MS.gene053630 | MS.gene066112 | 0.805183 | 1.51E-49 | -1.69E-46 |
| MS.gene053998 | MS.gene066112 | 0.810455 | 1.14E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene066112 | 0.802224 | 6.21E-49 | -1.69E-46 |
| MS.gene054472 | MS.gene066112 | 0.807637 | 4.59E-50 | -1.69E-46 |
| MS.gene054550 | MS.gene066112 | 0.809672 | 1.69E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene066112 | 0.827817 | 1.27E-54 | -1.69E-46 |
| MS.gene05462 | MS.gene066112 | 0.809817 | 1.57E-50 | -1.69E-46 |
| MS.gene055357 | MS.gene066112 | 0.809626 | 1.72E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene066112 | 0.845132 | 4.91E-59 | -1.69E-46 |
| MS.gene055466 | MS.gene066112 | 0.842065 | 3.25E-58 | -1.69E-46 |
| MS.gene055467 | MS.gene066112 | 0.80346 | 3.45E-49 | -1.69E-46 |
| MS.gene055468 | MS.gene066112 | 0.825094 | 5.65E-54 | -1.69E-46 |
| MS.gene055469 | MS.gene066112 | 0.819101 | 1.39E-52 | -1.69E-46 |
| MS.gene055512 | MS.gene066112 | 0.829904 | 3.96E-55 | -1.69E-46 |
| MS.gene055580 | MS.gene066112 | -0.818799 | 1.62E-52 | -1.69E-46 |
| MS.gene055608 | MS.gene066112 | 0.80553 | 1.28E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene066112 | 0.800012 | 1.76E-48 | -1.69E-46 |
| MS.gene055818 | MS.gene066112 | 0.811779 | 5.90E-51 | -1.69E-46 |
| MS.gene055890 | MS.gene066112 | 0.827225 | 1.76E-54 | -1.69E-46 |
| MS.gene055891 | MS.gene066112 | 0.823714 | 1.19E-53 | -1.69E-46 |
| MS.gene056043 | MS.gene066112 | -0.800252 | 1.57E-48 | -1.69E-46 |
| MS.gene05604 | MS.gene066112 | 0.801566 | 8.48E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene066112 | 0.813128 | 2.99E-51 | -1.69E-46 |
| MS.gene056553 | MS.gene066112 | 0.832277 | 1.04E-55 | -1.69E-46 |
| MS.gene056760 | MS.gene066112 | 0.805509 | 1.29E-49 | -1.69E-46 |
| MS.gene057314 | MS.gene066112 | 0.810159 | 1.32E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene066112 | 0.826769 | 2.26E-54 | -1.69E-46 |
| MS.gene057446 | MS.gene066112 | 0.810877 | 9.26E-51 | -1.69E-46 |
| MS.gene057869 | MS.gene066112 | 0.843544 | 1.31E-58 | -1.69E-46 |
| MS.gene057915 | MS.gene066112 | 0.83433 | 3.19E-56 | -1.69E-46 |
| MS.gene058168 | MS.gene066112 | 0.810487 | 1.13E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene066112 | 0.821246 | 4.47E-53 | -1.69E-46 |
| MS.gene059128 | MS.gene066112 | 0.813218 | 2.86E-51 | -1.69E-46 |
| MS.gene059937 | MS.gene066112 | 0.846403 | 2.22E-59 | -1.69E-46 |
| MS.gene060194 | MS.gene066112 | 0.806144 | 9.49E-50 | -1.69E-46 |
| MS.gene060312 | MS.gene066112 | 0.80991 | 1.50E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene066112 | 0.848537 | 5.75E-60 | -1.69E-46 |
| MS.gene060803 | MS.gene066112 | 0.808 | 3.84E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066112.t1 | MTR_3g108600 | 96.386 | 83 | 3 | 0 | 1 | 83 | 39 | 121 | 5.90e-50 | 163 |
| MS.gene066112.t1 | MTR_1g010120 | 84.146 | 82 | 13 | 0 | 2 | 83 | 35 | 116 | 6.30e-42 | 142 |
| MS.gene066112.t1 | MTR_2g027560 | 58.537 | 82 | 34 | 0 | 2 | 83 | 37 | 118 | 1.23e-25 | 98.6 |
| MS.gene066112.t1 | MTR_4g124440 | 57.317 | 82 | 35 | 0 | 2 | 83 | 37 | 118 | 5.22e-24 | 94.0 |
| MS.gene066112.t1 | MTR_8g092070 | 54.878 | 82 | 37 | 0 | 2 | 83 | 43 | 124 | 4.83e-23 | 91.3 |
| MS.gene066112.t1 | MTR_1g053320 | 56.098 | 82 | 36 | 0 | 2 | 83 | 39 | 120 | 3.18e-22 | 89.0 |
| MS.gene066112.t1 | MTR_7g085390 | 56.250 | 80 | 34 | 1 | 2 | 81 | 35 | 113 | 3.66e-21 | 85.9 |
| MS.gene066112.t1 | MTR_3g095050 | 54.430 | 79 | 35 | 1 | 5 | 83 | 46 | 123 | 3.67e-21 | 85.9 |
| MS.gene066112.t1 | MTR_6g032820 | 52.381 | 84 | 38 | 2 | 1 | 83 | 34 | 116 | 6.76e-20 | 82.0 |
| MS.gene066112.t1 | MTR_4g112025 | 45.122 | 82 | 45 | 0 | 2 | 83 | 40 | 121 | 1.46e-18 | 78.6 |
| MS.gene066112.t1 | MTR_3g031770 | 50.649 | 77 | 38 | 0 | 1 | 77 | 35 | 111 | 4.66e-17 | 74.3 |
| MS.gene066112.t1 | MTR_1g031900 | 49.351 | 77 | 39 | 0 | 2 | 78 | 33 | 109 | 1.43e-16 | 72.8 |
| MS.gene066112.t1 | MTR_1g031900 | 51.351 | 74 | 36 | 0 | 2 | 75 | 33 | 106 | 1.71e-16 | 72.8 |
| MS.gene066112.t1 | MTR_5g078200 | 48.485 | 66 | 34 | 0 | 7 | 72 | 37 | 102 | 4.94e-14 | 65.9 |
| MS.gene066112.t1 | MTR_5g078200 | 48.485 | 66 | 34 | 0 | 7 | 72 | 4 | 69 | 4.97e-14 | 65.9 |
| MS.gene066112.t1 | MTR_3g080410 | 44.928 | 69 | 38 | 0 | 1 | 69 | 34 | 102 | 1.19e-12 | 61.6 |
| MS.gene066112.t1 | MTR_3g065460 | 43.939 | 66 | 37 | 0 | 7 | 72 | 38 | 103 | 1.38e-12 | 61.6 |
| MS.gene066112.t1 | MTR_2g034440 | 39.706 | 68 | 41 | 0 | 2 | 69 | 31 | 98 | 1.71e-12 | 61.2 |
| MS.gene066112.t1 | MTR_5g085580 | 41.429 | 70 | 41 | 0 | 3 | 72 | 35 | 104 | 1.79e-12 | 61.2 |
| MS.gene066112.t1 | MTR_8g085720 | 43.243 | 74 | 42 | 0 | 2 | 75 | 35 | 108 | 2.25e-12 | 60.8 |
| MS.gene066112.t1 | MTR_7g081370 | 41.772 | 79 | 44 | 1 | 3 | 81 | 38 | 114 | 9.20e-12 | 58.9 |
| MS.gene066112.t1 | MTR_7g081350 | 40.506 | 79 | 45 | 1 | 3 | 81 | 37 | 113 | 1.66e-11 | 58.5 |
| MS.gene066112.t1 | MTR_3g083580 | 37.500 | 72 | 45 | 0 | 2 | 73 | 35 | 106 | 2.93e-11 | 57.8 |
| MS.gene066112.t1 | MTR_1g056640 | 37.143 | 70 | 44 | 0 | 3 | 72 | 48 | 117 | 3.88e-11 | 57.4 |
| MS.gene066112.t1 | MTR_1g077990 | 38.667 | 75 | 45 | 1 | 1 | 75 | 39 | 112 | 5.74e-11 | 57.0 |
| MS.gene066112.t1 | MTR_8g012400 | 37.500 | 72 | 45 | 0 | 3 | 74 | 39 | 110 | 6.74e-11 | 56.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066112.t1 | AT4G31140 | 69.136 | 81 | 25 | 0 | 3 | 83 | 37 | 117 | 9.53e-32 | 115 |
| MS.gene066112.t1 | AT5G58090 | 65.000 | 80 | 28 | 0 | 2 | 81 | 31 | 110 | 1.54e-29 | 108 |
| MS.gene066112.t1 | AT5G20870 | 60.000 | 80 | 32 | 0 | 2 | 81 | 39 | 118 | 1.13e-26 | 101 |
| MS.gene066112.t1 | AT5G64790 | 53.012 | 83 | 39 | 0 | 1 | 83 | 36 | 118 | 2.42e-23 | 92.0 |
| MS.gene066112.t1 | AT3G04010 | 52.500 | 80 | 37 | 1 | 2 | 81 | 42 | 120 | 2.27e-20 | 83.6 |
| MS.gene066112.t1 | AT3G24330 | 48.780 | 82 | 42 | 0 | 2 | 83 | 48 | 129 | 3.78e-20 | 83.2 |
| MS.gene066112.t1 | AT1G64760 | 53.750 | 80 | 36 | 1 | 1 | 80 | 33 | 111 | 3.47e-19 | 80.5 |
| MS.gene066112.t1 | AT1G64760 | 53.750 | 80 | 36 | 1 | 1 | 80 | 33 | 111 | 3.47e-19 | 80.5 |
| MS.gene066112.t1 | AT4G17180 | 51.899 | 79 | 33 | 1 | 3 | 81 | 35 | 108 | 5.35e-19 | 79.7 |
| MS.gene066112.t1 | AT5G58480 | 48.193 | 83 | 42 | 1 | 2 | 84 | 35 | 116 | 6.03e-19 | 79.7 |
| MS.gene066112.t1 | AT2G19440 | 52.500 | 80 | 37 | 1 | 1 | 80 | 29 | 107 | 7.72e-19 | 79.3 |
| MS.gene066112.t1 | AT2G19440 | 52.500 | 80 | 37 | 1 | 1 | 80 | 29 | 107 | 7.72e-19 | 79.3 |
| MS.gene066112.t1 | AT5G18220 | 55.072 | 69 | 30 | 1 | 2 | 70 | 39 | 106 | 2.25e-17 | 75.1 |
| MS.gene066112.t1 | AT2G05790 | 43.421 | 76 | 43 | 0 | 4 | 79 | 36 | 111 | 8.64e-16 | 70.9 |
| MS.gene066112.t1 | AT2G01630 | 43.662 | 71 | 40 | 0 | 2 | 72 | 32 | 102 | 9.40e-15 | 67.8 |
| MS.gene066112.t1 | AT2G01630 | 43.662 | 71 | 40 | 0 | 2 | 72 | 32 | 102 | 9.99e-15 | 67.8 |
| MS.gene066112.t1 | AT2G01630 | 43.662 | 71 | 40 | 0 | 2 | 72 | 32 | 102 | 1.01e-14 | 67.8 |
| MS.gene066112.t1 | AT1G11820 | 40.845 | 71 | 42 | 0 | 2 | 72 | 53 | 123 | 5.90e-14 | 65.5 |
| MS.gene066112.t1 | AT1G11820 | 40.845 | 71 | 42 | 0 | 2 | 72 | 53 | 123 | 7.41e-14 | 65.1 |
| MS.gene066112.t1 | AT1G11820 | 40.278 | 72 | 43 | 0 | 1 | 72 | 52 | 123 | 1.03e-13 | 64.7 |
| MS.gene066112.t1 | AT1G66250 | 46.970 | 66 | 35 | 0 | 7 | 72 | 46 | 111 | 1.88e-13 | 63.9 |
| MS.gene066112.t1 | AT3G13560 | 36.364 | 77 | 49 | 0 | 2 | 78 | 35 | 111 | 1.11e-11 | 58.9 |
| MS.gene066112.t1 | AT3G13560 | 36.364 | 77 | 49 | 0 | 2 | 78 | 35 | 111 | 1.11e-11 | 58.9 |
| MS.gene066112.t1 | AT3G13560 | 36.364 | 77 | 49 | 0 | 2 | 78 | 35 | 111 | 1.11e-11 | 58.9 |
| MS.gene066112.t1 | AT3G13560 | 36.364 | 77 | 49 | 0 | 2 | 78 | 35 | 111 | 1.11e-11 | 58.9 |
| MS.gene066112.t1 | AT3G13560 | 36.364 | 77 | 49 | 0 | 2 | 78 | 35 | 111 | 1.11e-11 | 58.9 |
| MS.gene066112.t1 | AT4G26830 | 38.806 | 67 | 41 | 0 | 3 | 69 | 35 | 101 | 3.81e-11 | 57.4 |
| MS.gene066112.t1 | AT4G26830 | 38.806 | 67 | 41 | 0 | 3 | 69 | 39 | 105 | 3.96e-11 | 57.4 |
| MS.gene066112.t1 | AT5G24318 | 37.805 | 82 | 48 | 3 | 3 | 83 | 40 | 119 | 5.31e-11 | 57.0 |
| MS.gene066112.t1 | AT5G24318 | 37.805 | 82 | 48 | 3 | 3 | 83 | 40 | 119 | 7.39e-11 | 56.6 |
Find 13 sgRNAs with CRISPR-Local
Find 23 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGAGCATTTAAGATATT+TGG | 0.103415 | 3.3:+88667361 | None:intergenic |
| GTTTCTGCTCATGTCTCTTC+TGG | 0.203329 | 3.3:-88667241 | MS.gene066112:CDS |
| GTGAAAATGCTGAAAGATAA+TGG | 0.333803 | 3.3:-88667415 | MS.gene066112:CDS |
| GACATGAGCAGAAACATTCT+TGG | 0.361876 | 3.3:+88667249 | None:intergenic |
| CTTCTGGAGGTGTTGACATC+AGG | 0.401083 | 3.3:-88667225 | MS.gene066112:intron |
| AGTGTATAAAGCATGTCATT+TGG | 0.415994 | 3.3:+88667307 | None:intergenic |
| CTGGTATTCAAGTCATGGTT+GGG | 0.445896 | 3.3:-88667333 | MS.gene066112:CDS |
| TGAAAATGCTGAAAGATAAT+GGG | 0.469982 | 3.3:-88667414 | MS.gene066112:CDS |
| TTAAATGCTCTCAAGAAGAC+TGG | 0.540820 | 3.3:-88667352 | MS.gene066112:CDS |
| ACTGGTATTCAAGTCATGGT+TGG | 0.565992 | 3.3:-88667334 | MS.gene066112:CDS |
| TCTGCTCATGTCTCTTCTGG+AGG | 0.579116 | 3.3:-88667238 | MS.gene066112:CDS |
| GAAGACTGGTATTCAAGTCA+TGG | 0.586341 | 3.3:-88667338 | MS.gene066112:CDS |
| GAAAGATAATGGGATTCTGA+AGG | 0.642239 | 3.3:-88667404 | MS.gene066112:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATAAATTCAAATAG+AGG | + | chr3.3:88667433-88667452 | None:intergenic | 10.0% |
| !! | AAAAAATAAATTCAAATAGA+GGG | + | chr3.3:88667432-88667451 | None:intergenic | 10.0% |
| !!! | CTATTTGAATTTATTTTTTT+AGG | - | chr3.3:88667433-88667452 | MS.gene066112:CDS | 10.0% |
| ! | TGAAAATGCTGAAAGATAAT+GGG | - | chr3.3:88667213-88667232 | MS.gene066112:intron | 25.0% |
| !!! | TTGAGAGCATTTAAGATATT+TGG | + | chr3.3:88667269-88667288 | None:intergenic | 25.0% |
| AGTGTATAAAGCATGTCATT+TGG | + | chr3.3:88667323-88667342 | None:intergenic | 30.0% | |
| GTGAAAATGCTGAAAGATAA+TGG | - | chr3.3:88667212-88667231 | MS.gene066112:intron | 30.0% | |
| TTAAATGCTCTCAAGAAGAC+TGG | - | chr3.3:88667275-88667294 | MS.gene066112:CDS | 35.0% | |
| !! | GAAAGATAATGGGATTCTGA+AGG | - | chr3.3:88667223-88667242 | MS.gene066112:intron | 35.0% |
| ACTGGTATTCAAGTCATGGT+TGG | - | chr3.3:88667293-88667312 | MS.gene066112:CDS | 40.0% | |
| CTGGTATTCAAGTCATGGTT+GGG | - | chr3.3:88667294-88667313 | MS.gene066112:CDS | 40.0% | |
| GAAGACTGGTATTCAAGTCA+TGG | - | chr3.3:88667289-88667308 | MS.gene066112:CDS | 40.0% | |
| GACATGAGCAGAAACATTCT+TGG | + | chr3.3:88667381-88667400 | None:intergenic | 40.0% | |
| TCTTCCAGCTGCTGAAAAAT+GGG | - | chr3.3:88667352-88667371 | MS.gene066112:CDS | 40.0% | |
| ! | TTTCAGCATTTTCACCACTG+TGG | + | chr3.3:88667207-88667226 | None:intergenic | 40.0% |
| GTCTTCCAGCTGCTGAAAAA+TGG | - | chr3.3:88667351-88667370 | MS.gene066112:CDS | 45.0% | |
| GTTTCTGCTCATGTCTCTTC+TGG | - | chr3.3:88667386-88667405 | MS.gene066112:CDS | 45.0% | |
| ! | AGCATTTTCACCACTGTGGT+TGG | + | chr3.3:88667203-88667222 | None:intergenic | 45.0% |
| ! | TCTTTTGTCACCAACCACAG+TGG | - | chr3.3:88667190-88667209 | MS.gene066112:intron | 45.0% |
| !! | GAAACCCATTTTTCAGCAGC+TGG | + | chr3.3:88667359-88667378 | None:intergenic | 45.0% |
| !!! | TATTTGAATTTATTTTTTTA+GGG | - | chr3.3:88667434-88667453 | MS.gene066112:CDS | 5.0% |
| TCTGCTCATGTCTCTTCTGG+AGG | - | chr3.3:88667389-88667408 | MS.gene066112:CDS | 50.0% | |
| !! | CTTCTGGAGGTGTTGACATC+AGG | - | chr3.3:88667402-88667421 | MS.gene066112:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 88667182 | 88667467 | 88667182 | ID=MS.gene066112 |
| chr3.3 | mRNA | 88667182 | 88667467 | 88667182 | ID=MS.gene066112.t1;Parent=MS.gene066112 |
| chr3.3 | exon | 88667226 | 88667467 | 88667226 | ID=MS.gene066112.t1.exon1;Parent=MS.gene066112.t1 |
| chr3.3 | CDS | 88667226 | 88667467 | 88667226 | ID=cds.MS.gene066112.t1;Parent=MS.gene066112.t1 |
| chr3.3 | exon | 88667182 | 88667194 | 88667182 | ID=MS.gene066112.t1.exon2;Parent=MS.gene066112.t1 |
| chr3.3 | CDS | 88667182 | 88667194 | 88667182 | ID=cds.MS.gene066112.t1;Parent=MS.gene066112.t1 |
| Gene Sequence |
| Protein sequence |
