AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072150


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072150.t1 MTR_8g015590 99.213 254 2 0 1 254 1 254 0.0 510
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072150.t1 AT1G51730 70.445 247 71 2 1 246 1 246 7.78e-106 306

Find 47 sgRNAs with CRISPR-Local

Find 401 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATATCGTCTGAAGATTTA+AGG 0.204105 8.1:-82003895 MS.gene072150:CDS
AGGCATTCTTACATCTTCTT+TGG 0.306333 8.1:+82003421 None:intergenic
TTTAATCTGGAAGCACCTAT+TGG 0.387103 8.1:+82005638 None:intergenic
TTCATGTTAGAAATACATTC+TGG 0.390456 8.1:-82005681 MS.gene072150:intron
AGCTGTTGTCACGGAAGATT+TGG 0.403140 8.1:-81999624 MS.gene072150:CDS
GTGGTTTAAGCACTTCCAAT+AGG 0.412630 8.1:-82005653 MS.gene072150:CDS
TTCAAAAGCGGAGGTTCGTC+TGG 0.413109 8.1:+82004066 None:intergenic
CCACAGGCATCTGAAAATCT+TGG 0.452799 8.1:-82003542 MS.gene072150:intron
AACAGTAACTGCTTCTCCAT+GGG 0.457881 8.1:+82002376 None:intergenic
AGAAATGGAGATTGAAGCAT+TGG 0.464035 8.1:-82005822 MS.gene072150:CDS
AGATTTGGATGAGGAGGATG+AGG 0.480488 8.1:-81999609 MS.gene072150:CDS
CAACAGTAACTGCTTCTCCA+TGG 0.482263 8.1:+82002375 None:intergenic
CCAGATTAAAATCACTGCTC+AGG 0.484543 8.1:-82005625 MS.gene072150:intron
GAAATACATTCTGGTGAAAG+TGG 0.495312 8.1:-82005672 MS.gene072150:CDS
ACTATACAAAACAGTTTGCA+AGG 0.496821 8.1:-82003917 MS.gene072150:intron
TCCAACTAACTCACCATGAC+AGG 0.510196 8.1:-82005963 None:intergenic
GACGAGTCAAATACTAATCC+AGG 0.514669 8.1:-82004305 MS.gene072150:intron
GAAAGACAAACTTCAACAAG+AGG 0.517470 8.1:-82003867 MS.gene072150:intron
GCAATTGTACAGGAGGAAGA+TGG 0.524264 8.1:-82004329 MS.gene072150:intron
GATGATGATGAGGATTTCGA+AGG 0.528804 8.1:-81999572 MS.gene072150:intron
CTACGCGCAAGAGCAAGAAA+TGG 0.530322 8.1:-82005837 MS.gene072150:CDS
TGCAATTTAACTCGCTCGCA+TGG 0.532396 8.1:+81999393 None:intergenic
GGCAGACAGTGGTTTGAAAG+TGG 0.536978 8.1:-82001848 MS.gene072150:CDS
GAAGTAGCAAGCACAGACTC+TGG 0.546961 8.1:+82001890 None:intergenic
CACGGAAGATTTGGATGAGG+AGG 0.550207 8.1:-81999615 MS.gene072150:CDS
ATACTCATGGATGAATTCAA+AGG 0.551824 8.1:-82005794 MS.gene072150:intron
GACAGTGGTTTGAAAGTGGA+AGG 0.561439 8.1:-82001844 MS.gene072150:CDS
CATTGACTTTGATGATGATG+AGG 0.578083 8.1:-81999582 MS.gene072150:CDS
GTCTGTGCTTGCTACTTCGA+AGG 0.579213 8.1:-82001885 MS.gene072150:CDS
TGGTGATGCTGAAGCAGAAG+AGG 0.584742 8.1:-82003447 MS.gene072150:CDS
GGCATCTGAAAATCTTGGCA+TGG 0.589383 8.1:-82003537 MS.gene072150:CDS
TCGAAGGAAAAGAAACTCAC+TGG 0.592415 8.1:-82001869 MS.gene072150:CDS
CGCTCGCATGGAAGAATGTG+TGG 0.597052 8.1:+81999405 None:intergenic
GAAAGGTGCAGCTGTTGTCA+CGG 0.599442 8.1:-81999633 MS.gene072150:CDS
GTGGTTTGAAAGTGGAAGGA+TGG 0.600163 8.1:-82001840 MS.gene072150:intron
AGCATTGGAAGCTATACTCA+TGG 0.600703 8.1:-82005807 MS.gene072150:CDS
AAATTTGGGAATACCTGTCA+TGG 0.615517 8.1:+82005950 None:intergenic
CTAAAGAGTGGTTGACTGAG+CGG 0.616560 8.1:-82003487 MS.gene072150:CDS
TTGTTAGCTCAGCTAAAGAG+TGG 0.628644 8.1:-82003499 MS.gene072150:CDS
TGTCACGGAAGATTTGGATG+AGG 0.632911 8.1:-81999618 MS.gene072150:CDS
CTGCTCACATTCAAAAGCGG+AGG 0.633056 8.1:+82004057 None:intergenic
GACCTGCTCACATTCAAAAG+CGG 0.648261 8.1:+82004054 None:intergenic
TCTTAGATAGTGGTACCCCA+TGG 0.659025 8.1:-82002392 MS.gene072150:intron
TGATGCTGAAGCAGAAGAGG+CGG 0.674289 8.1:-82003444 MS.gene072150:CDS
ACAGTAACTGCTTCTCCATG+GGG 0.675643 8.1:+82002377 None:intergenic
AGAAACTCACTGGCAGACAG+TGG 0.676924 8.1:-82001859 MS.gene072150:CDS
CGGTATTGTGAAGACTCAGA+TGG 0.683666 8.1:-82003467 MS.gene072150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTAAAATAAATAAAT+GGG + chr8.1:81999594-81999613 None:intergenic 0.0%
!!! TTTTTATTAAAATAAATAAA+TGG + chr8.1:81999595-81999614 None:intergenic 0.0%
!! CAGATAATATATAATATTAT+TGG - chr8.1:82002091-82002110 MS.gene072150:intron 10.0%
!!! AAAGTCAATTTTAATATTAT+CGG - chr8.1:82004317-82004336 MS.gene072150:CDS 10.0%
!!! TTAATATATGACTTTAATTT+TGG - chr8.1:82001153-82001172 MS.gene072150:intron 10.0%
!!! TTGTTTTATAATTCAATAAA+TGG + chr8.1:82005489-82005508 None:intergenic 10.0%
!! AAGAAAATAATATATCAAAG+AGG + chr8.1:82001074-82001093 None:intergenic 15.0%
!! AATAGTAAGTGATATTTAAA+TGG - chr8.1:82003312-82003331 MS.gene072150:intron 15.0%
!! ACAAAATAGAATATAAAGTA+AGG + chr8.1:82005818-82005837 None:intergenic 15.0%
!! AGAAGATTTATAAAAAAAGA+GGG + chr8.1:82002199-82002218 None:intergenic 15.0%
!! ATAATGATGAAAAATCAAAA+AGG + chr8.1:81999480-81999499 None:intergenic 15.0%
!! ATGAAACAAAAAAATATGTA+CGG + chr8.1:82001371-82001390 None:intergenic 15.0%
!! ATTTATGTATATAAGTTCTT+GGG - chr8.1:81999776-81999795 MS.gene072150:intron 15.0%
!! CATAACATAATTTATATAAC+TGG + chr8.1:82000438-82000457 None:intergenic 15.0%
!! GTTTGTATTAAGAATAAATA+GGG + chr8.1:82004236-82004255 None:intergenic 15.0%
!! TAATGATGAAAAATCAAAAA+GGG + chr8.1:81999479-81999498 None:intergenic 15.0%
!! TATTTATGTATATAAGTTCT+TGG - chr8.1:81999775-81999794 MS.gene072150:intron 15.0%
!! TGAATTTCAATGAAATTATT+TGG - chr8.1:82000784-82000803 MS.gene072150:intron 15.0%
!! TGTTAAAAACAAAAGAATTT+GGG + chr8.1:82003270-82003289 None:intergenic 15.0%
!! TGTTTGTATTAAGAATAAAT+AGG + chr8.1:82004237-82004256 None:intergenic 15.0%
!! TTATTCATTAATTATGTTGT+CGG + chr8.1:82004265-82004284 None:intergenic 15.0%
!! TTGTTAAAAACAAAAGAATT+TGG + chr8.1:82003271-82003290 None:intergenic 15.0%
!!! AAATTAGTATCTTTTTTTTG+AGG - chr8.1:82000149-82000168 MS.gene072150:intron 15.0%
!!! AATTAGTATCTTTTTTTTGA+GGG - chr8.1:82000150-82000169 MS.gene072150:intron 15.0%
!!! ATATTTTTTAATCAAATCTG+AGG - chr8.1:82000264-82000283 MS.gene072150:intron 15.0%
!!! GATAATATTAAAATTGACTT+TGG + chr8.1:82004318-82004337 None:intergenic 15.0%
!!! GTTCTAAAATAATAAAAACA+AGG + chr8.1:82000725-82000744 None:intergenic 15.0%
!!! TAGTTGATAAAAAAAATTCT+TGG - chr8.1:82003647-82003666 MS.gene072150:intron 15.0%
!!! TTGATAGTAATTTTTGAAAT+CGG - chr8.1:82004053-82004072 MS.gene072150:intron 15.0%
!! AAACTATCATTATATACTGT+AGG + chr8.1:82001949-82001968 None:intergenic 20.0%
!! ATCTATGATTCAGAAAATTA+AGG - chr8.1:82003895-82003914 MS.gene072150:CDS 20.0%
!! ATTAAGAATAAATAGGGAAA+GGG + chr8.1:82004230-82004249 None:intergenic 20.0%
!! CAAATTGAAAGAATTCTTAA+TGG - chr8.1:82001642-82001661 MS.gene072150:intron 20.0%
!! CAGAAGATTTATAAAAAAAG+AGG + chr8.1:82002200-82002219 None:intergenic 20.0%
!! CTATTTGGTAAAATAAATTG+CGG - chr8.1:81999831-81999850 MS.gene072150:intron 20.0%
!! GAAATAACATAGAAAAGTTA+TGG - chr8.1:81999933-81999952 MS.gene072150:intron 20.0%
!! GAAGATTTATAAAAAAAGAG+GGG + chr8.1:82002198-82002217 None:intergenic 20.0%
!! TATTAAGAATAAATAGGGAA+AGG + chr8.1:82004231-82004250 None:intergenic 20.0%
!! TCATTAAGAGACATTATAAT+AGG + chr8.1:82004348-82004367 None:intergenic 20.0%
!! TCTATGATTCAGAAAATTAA+GGG - chr8.1:82003896-82003915 MS.gene072150:CDS 20.0%
!! TGTTAAAAACAAAAGGATTT+GGG + chr8.1:82003355-82003374 None:intergenic 20.0%
!! TTAATGGAATAGAATGAAAT+TGG + chr8.1:81999437-81999456 None:intergenic 20.0%
!! TTGGATATGAAGTTTAATAA+AGG + chr8.1:82002318-82002337 None:intergenic 20.0%
!! TTGTTAAAAACAAAAGGATT+TGG + chr8.1:82003356-82003375 None:intergenic 20.0%
!! TTTAGACATTATAATAGGAT+GGG + chr8.1:82005543-82005562 None:intergenic 20.0%
!! TTTATTAAACTTCATATCCA+AGG - chr8.1:82002317-82002336 MS.gene072150:CDS 20.0%
!!! ACATAGAAAATGTCATTTTA+AGG + chr8.1:82003561-82003580 None:intergenic 20.0%
!!! ATGTATTCTATCTTTTGATT+GGG + chr8.1:82005256-82005275 None:intergenic 20.0%
!!! ATTATAATGTCTAAAATGAG+AGG - chr8.1:82005548-82005567 MS.gene072150:intron 20.0%
!!! CTCATTTTAGACATTATAAT+AGG + chr8.1:82005548-82005567 None:intergenic 20.0%
!!! GAATTAGTTTTTTAGCTAAT+GGG - chr8.1:82000406-82000425 MS.gene072150:intron 20.0%
!!! TGAATTAGTTTTTTAGCTAA+TGG - chr8.1:82000405-82000424 MS.gene072150:intron 20.0%
!!! TTTTAGACATTATAATAGGA+TGG + chr8.1:82005544-82005563 None:intergenic 20.0%
! AAATTGTTCACACAATTTAG+TGG - chr8.1:82000843-82000862 MS.gene072150:intron 25.0%
! ACATAGTCAGTGATATTTAA+AGG - chr8.1:82003226-82003245 MS.gene072150:intron 25.0%
! ACTAGCAGATAATATATGTA+AGG - chr8.1:82002583-82002602 MS.gene072150:intron 25.0%
! ATAAACAGAAAAACTGCATA+TGG + chr8.1:82001516-82001535 None:intergenic 25.0%
! ATCATTACATGTAAACTTTC+TGG + chr8.1:82005841-82005860 None:intergenic 25.0%
! ATGGTAATATACAAAAGACA+TGG - chr8.1:82001199-82001218 MS.gene072150:intron 25.0%
! ATGTTTATAGAGAAGTTGAA+TGG - chr8.1:82000496-82000515 MS.gene072150:intron 25.0%
! CAAAAATGTAGAAAAGATGA+AGG + chr8.1:82004629-82004648 None:intergenic 25.0%
! CAAATTGAAAGACTTCTTAA+TGG - chr8.1:82001584-82001603 MS.gene072150:intron 25.0%
! CAGAAATAGAATAAAGACAA+AGG - chr8.1:82004004-82004023 MS.gene072150:intron 25.0%
! CATAGTCAGTGATATTTAAA+GGG - chr8.1:82003227-82003246 MS.gene072150:intron 25.0%
! CATTAAGAAGTCTTTCAATT+TGG + chr8.1:82001586-82001605 None:intergenic 25.0%
! CTATGATTCAGAAAATTAAG+GGG - chr8.1:82003897-82003916 MS.gene072150:CDS 25.0%
! GAATCAGATAATATTCGATT+TGG - chr8.1:82002113-82002132 MS.gene072150:intron 25.0%
! TAAAGTATAATCCTGTAGTT+CGG - chr8.1:82002748-82002767 MS.gene072150:intron 25.0%
! TAAGAGACATTATAATAGGA+GGG + chr8.1:82004344-82004363 None:intergenic 25.0%
! TGAAACTTCACTGTAATTAT+TGG + chr8.1:82004105-82004124 None:intergenic 25.0%
! TGGAAACATTGTATTCAAAA+TGG + chr8.1:82001668-82001687 None:intergenic 25.0%
! TGTACCAAAAACTTCAAAAT+CGG - chr8.1:82005140-82005159 MS.gene072150:intron 25.0%
! TGTTTATAGAGAAGTTGAAT+GGG - chr8.1:82000497-82000516 MS.gene072150:intron 25.0%
! TGTTTCTTCACTTACAAAAA+TGG - chr8.1:82000456-82000475 MS.gene072150:intron 25.0%
! TTAAGAGACATTATAATAGG+AGG + chr8.1:82004345-82004364 None:intergenic 25.0%
! TTCAGAATTGAATATTACAC+AGG - chr8.1:82005289-82005308 MS.gene072150:intron 25.0%
! TTCATGTTAGAAATACATTC+TGG - chr8.1:81999666-81999685 MS.gene072150:intron 25.0%
!! AAACACTAAAACTCCATTTT+CGG - chr8.1:82005112-82005131 MS.gene072150:intron 25.0%
!! AGTTACTGTTGAAACATTTT+TGG - chr8.1:82002984-82003003 MS.gene072150:intron 25.0%
!! ATGATAATTTTATAGCTCAC+AGG + chr8.1:82003727-82003746 None:intergenic 25.0%
!! ATTGTCTTTGAAAACAAAGT+TGG + chr8.1:82002501-82002520 None:intergenic 25.0%
!! CAACTTTTGATAAAGGATAA+TGG + chr8.1:82002563-82002582 None:intergenic 25.0%
!! CAATTTTTAATGTCCCATTT+TGG + chr8.1:82003678-82003697 None:intergenic 25.0%
!! CATCTTTTCTACATTTTTGA+CGG - chr8.1:82004630-82004649 MS.gene072150:intron 25.0%
!! CATGTATTCTATCTTTTGAT+TGG + chr8.1:82005257-82005276 None:intergenic 25.0%
!! CTTCACTTGTTAAAAACAAA+AGG + chr8.1:82003277-82003296 None:intergenic 25.0%
!! GATATTATTAAAACTGGCTT+TGG + chr8.1:82005518-82005537 None:intergenic 25.0%
!! TATTTTCCTATTGTATGTAC+TGG - chr8.1:82000760-82000779 MS.gene072150:intron 25.0%
!! TCATTTTGTAATCAAGTGAA+CGG + chr8.1:82003764-82003783 None:intergenic 25.0%
!! TGAATCTAGATTTTATGCTT+TGG - chr8.1:82002425-82002444 MS.gene072150:intron 25.0%
!! TTGTCTTTGAAAACAAAGTT+GGG + chr8.1:82002500-82002519 None:intergenic 25.0%
!! TTTTCATTGTTTGTGGATAT+AGG - chr8.1:82000868-82000887 MS.gene072150:intron 25.0%
!! TTTTTCTCTCAAATTTACAC+TGG + chr8.1:81999994-82000013 None:intergenic 25.0%
!!! ATGTTTTTTTTAGTCCATGT+AGG - chr8.1:81999806-81999825 MS.gene072150:intron 25.0%
!!! GTAAATACAAAAAAGTGCTA+CGG + chr8.1:82000213-82000232 None:intergenic 25.0%
!!! TAAATACAAAAAAGTGCTAC+GGG + chr8.1:82000212-82000231 None:intergenic 25.0%
!!! TACATGTTTTATCTGTTTCT+TGG - chr8.1:82005865-82005884 MS.gene072150:intron 25.0%
AAAAACAAAAGGATTTGGGT+TGG + chr8.1:82003351-82003370 None:intergenic 30.0%
AAACAAAGTTGGGTTAAACA+CGG + chr8.1:82002490-82002509 None:intergenic 30.0%
AAAGTATAATCCTGTAGTTC+GGG - chr8.1:82002749-82002768 MS.gene072150:intron 30.0%
AAATTTATGTGATTGTGAGG+AGG + chr8.1:82000966-82000985 None:intergenic 30.0%
AAGAGACATTATAATAGGAG+GGG + chr8.1:82004343-82004362 None:intergenic 30.0%
AAGTTAACCTAGTGCAAAAA+AGG - chr8.1:82005641-82005660 MS.gene072150:CDS 30.0%
AATATATGTAAGGTGTGGTT+AGG - chr8.1:82002593-82002612 MS.gene072150:intron 30.0%
AATTGAATCAGAGTCATTGA+AGG + chr8.1:82004845-82004864 None:intergenic 30.0%
ACAAAAACTGAAAGACAAGA+TGG + chr8.1:82001099-82001118 None:intergenic 30.0%
ACCCTTATATTTATCTGTCT+TGG - chr8.1:82000996-82001015 MS.gene072150:intron 30.0%
ACTATACAAAACAGTTTGCA+AGG - chr8.1:82001430-82001449 MS.gene072150:intron 30.0%
AGAGATCGAAAGAAAAATGA+AGG + chr8.1:82004674-82004693 None:intergenic 30.0%
AGAGTTTAAAAGAAAATGGG+TGG - chr8.1:82003162-82003181 MS.gene072150:intron 30.0%
AGCATTGTCTTCAAAAACAA+AGG + chr8.1:82002532-82002551 None:intergenic 30.0%
AGCGGACATGATAATATTAT+TGG - chr8.1:82002065-82002084 MS.gene072150:intron 30.0%
AGGGAGAGTTTAAAAGAAAA+TGG - chr8.1:82003158-82003177 MS.gene072150:intron 30.0%
ATAAAATCTAGATTCAGCCT+TGG + chr8.1:82002421-82002440 None:intergenic 30.0%
ATACAACAAGAGCAACAATA+AGG + chr8.1:82003063-82003082 None:intergenic 30.0%
ATACTCATGGATGAATTCAA+AGG - chr8.1:81999553-81999572 MS.gene072150:intron 30.0%
ATATATGTAAGGTGTGGTTA+GGG - chr8.1:82002594-82002613 MS.gene072150:intron 30.0%
ATGAAGAAAAAGATGCATAG+TGG + chr8.1:82005091-82005110 None:intergenic 30.0%
ATTATGTCAGTCAAAGAAAG+AGG + chr8.1:82000919-82000938 None:intergenic 30.0%
ATTCATCCAGTACATACAAT+AGG + chr8.1:82000769-82000788 None:intergenic 30.0%
ATTGAATATTACACAGGAAC+TGG - chr8.1:82005295-82005314 MS.gene072150:intron 30.0%
CAAAGGAAAATAGTAACACT+AGG - chr8.1:82004021-82004040 MS.gene072150:intron 30.0%
CAGATAATATATGTAAGGTG+TGG - chr8.1:82002588-82002607 MS.gene072150:intron 30.0%
CAGTTTATTACTTTAACCTC+TGG - chr8.1:82003926-82003945 MS.gene072150:intron 30.0%
CGTTATTGCTCACATTTATT+TGG + chr8.1:82004926-82004945 None:intergenic 30.0%
CTGATTGAATTTGTAGTGTT+TGG - chr8.1:81999877-81999896 MS.gene072150:intron 30.0%
GAAATACATAGACATGGTTT+CGG - chr8.1:82005317-82005336 MS.gene072150:intron 30.0%
GAATATCGTCTGAAGATTTA+AGG - chr8.1:82001452-82001471 MS.gene072150:intron 30.0%
GAGTTTAAAAGAAAATGGGT+GGG - chr8.1:82003163-82003182 MS.gene072150:intron 30.0%
GCAACAATATAACTCAAACA+CGG + chr8.1:82000668-82000687 None:intergenic 30.0%
GCCAAGACAGATAAATATAA+GGG + chr8.1:82001000-82001019 None:intergenic 30.0%
GCTTATGCGTATATACATAA+AGG + chr8.1:82001691-82001710 None:intergenic 30.0%
GGGAGAGTTTAAAAGAAAAT+GGG - chr8.1:82003159-82003178 MS.gene072150:intron 30.0%
GTAGTGTTTGGTAAAATTAG+TGG - chr8.1:81999889-81999908 MS.gene072150:intron 30.0%
GTGAACAATTTACTTTAAGC+TGG + chr8.1:82000834-82000853 None:intergenic 30.0%
GTGAAGTTTCAAATGAGATA+AGG - chr8.1:82004114-82004133 MS.gene072150:intron 30.0%
TACAACAAGAGCAACAATAA+GGG + chr8.1:82003062-82003081 None:intergenic 30.0%
TACTTCTAATTATAGAACCC+TGG + chr8.1:82004441-82004460 None:intergenic 30.0%
TAGAATACATGCATAAACAC+TGG - chr8.1:82005266-82005285 MS.gene072150:intron 30.0%
TATGCGTATATACATAAAGG+TGG + chr8.1:82001688-82001707 None:intergenic 30.0%
TATTTACCAAAATCCTCTGA+TGG - chr8.1:82001180-82001199 MS.gene072150:intron 30.0%
TCCAAATTTATGTGATTGTG+AGG + chr8.1:82000969-82000988 None:intergenic 30.0%
TCCTAACAAATTTAAAAGCC+AGG + chr8.1:82003808-82003827 None:intergenic 30.0%
TCCTCACAATCACATAAATT+TGG - chr8.1:82000965-82000984 MS.gene072150:intron 30.0%
TGAAGAAAAAGATGCATAGT+GGG + chr8.1:82005090-82005109 None:intergenic 30.0%
TGCCAAGACAGATAAATATA+AGG + chr8.1:82001001-82001020 None:intergenic 30.0%
TGCTCTTCTTCATAGAATAT+AGG - chr8.1:82004870-82004889 MS.gene072150:intron 30.0%
TGGGACGATATTATTAAAAC+TGG + chr8.1:82005524-82005543 None:intergenic 30.0%
TTAACAAGTGAAGTCATTGA+AGG - chr8.1:82003284-82003303 MS.gene072150:intron 30.0%
TTACAAAATGACCATACTAG+TGG - chr8.1:82003773-82003792 MS.gene072150:intron 30.0%
TTATGTCAGTCAAAGAAAGA+GGG + chr8.1:82000918-82000937 None:intergenic 30.0%
TTTAACAGAGAATTGTTGAG+AGG + chr8.1:82005598-82005617 None:intergenic 30.0%
! AAATCTGAGGAGTTGATTTA+TGG - chr8.1:82000277-82000296 MS.gene072150:intron 30.0%
! AAATGTTACTTGGAAAAAGC+TGG - chr8.1:82002907-82002926 MS.gene072150:intron 30.0%
! ATATTACCATCAGAGGATTT+TGG + chr8.1:82001189-82001208 None:intergenic 30.0%
! ATCAAAAAGGGTTAGCAAAA+CGG + chr8.1:81999467-81999486 None:intergenic 30.0%
! ATTATCAGTAGGGGATTTTA+AGG - chr8.1:82003122-82003141 MS.gene072150:intron 30.0%
! CTTTTGTATATTACCATCAG+AGG + chr8.1:82001196-82001215 None:intergenic 30.0%
! TAAGCTTTAGTCTGTCAAAA+AGG - chr8.1:82000025-82000044 MS.gene072150:intron 30.0%
! TAAGGCATCAAGGTATAAAT+AGG + chr8.1:82003543-82003562 None:intergenic 30.0%
! TCTCTATGATATTTTCACCA+AGG - chr8.1:82002401-82002420 MS.gene072150:intron 30.0%
! TGCTAGTCAACTTTTGATAA+AGG + chr8.1:82002570-82002589 None:intergenic 30.0%
! TTATCAGTAGGGGATTTTAA+GGG - chr8.1:82003123-82003142 MS.gene072150:intron 30.0%
! TTTTGTGTTTGTTCACAGAA+AGG - chr8.1:82005697-82005716 MS.gene072150:intron 30.0%
! TTTTTAATGTCCCATTTTGG+AGG + chr8.1:82003675-82003694 None:intergenic 30.0%
!! ACTTTTTCTTTGGTTATGCA+GGG + chr8.1:82000346-82000365 None:intergenic 30.0%
!! AGAAGGTATTGAGTTGTTAT+TGG + chr8.1:82004187-82004206 None:intergenic 30.0%
!! ATTTGTTGTGCATAATTGTC+AGG - chr8.1:82001752-82001771 MS.gene072150:intron 30.0%
!! CAACAACATGACTTTTTCTT+TGG + chr8.1:82000356-82000375 None:intergenic 30.0%
!! GAAGGTATTGAGTTGTTATT+GGG + chr8.1:82004186-82004205 None:intergenic 30.0%
!! TCCTGGCTTTTAAATTTGTT+AGG - chr8.1:82003804-82003823 MS.gene072150:intron 30.0%
!!! AACAAAACCTTTTTTGCACT+AGG + chr8.1:82005651-82005670 None:intergenic 30.0%
!!! AATGTCATTTTAAGGCATCA+AGG + chr8.1:82003553-82003572 None:intergenic 30.0%
AAAATCCCCTACTGATAATC+AGG + chr8.1:82003121-82003140 None:intergenic 35.0%
AACAAAGTTGGGTTAAACAC+GGG + chr8.1:82002489-82002508 None:intergenic 35.0%
AACCAATTTGTCATGATTGC+AGG - chr8.1:82003428-82003447 MS.gene072150:intron 35.0%
AACTAAGAAGAAAGAGCGAA+AGG + chr8.1:82005411-82005430 None:intergenic 35.0%
AATTATACCAGTGCGACTAT+CGG - chr8.1:82004973-82004992 MS.gene072150:intron 35.0%
ACAACAAGAGCAACAATAAG+GGG + chr8.1:82003061-82003080 None:intergenic 35.0%
ACTTCATATCCAAGGTTCAT+TGG - chr8.1:82002325-82002344 MS.gene072150:CDS 35.0%
AGAAATGGAGATTGAAGCAT+TGG - chr8.1:81999525-81999544 MS.gene072150:intron 35.0%
AGAGCTGGAGATTGAAATTT+GGG + chr8.1:81999414-81999433 None:intergenic 35.0%
AGGCATTCTTACATCTTCTT+TGG + chr8.1:82001929-82001948 None:intergenic 35.0%
AGTGAAGGAAAAGGAAATGA+AGG + chr8.1:82004764-82004783 None:intergenic 35.0%
AGTTACCTAGTTATTGCACA+TGG - chr8.1:82002691-82002710 MS.gene072150:intron 35.0%
AGTTAGAGTGGTTATTTGAG+TGG + chr8.1:82005367-82005386 None:intergenic 35.0%
ATAGAATGAAATTGGAGAGC+TGG + chr8.1:81999429-81999448 None:intergenic 35.0%
ATATCAAAGAGGAAGAAACC+TGG + chr8.1:82001063-82001082 None:intergenic 35.0%
ATCTACCATGTGCAATAACT+AGG + chr8.1:82002699-82002718 None:intergenic 35.0%
CATCGATGTTAGAAGGATTA+AGG - chr8.1:82002226-82002245 MS.gene072150:intron 35.0%
CCACTATCTAAGAATGTTGA+AGG + chr8.1:82002948-82002967 None:intergenic 35.0%
CCTTCAACATTCTTAGATAG+TGG - chr8.1:82002945-82002964 MS.gene072150:intron 35.0%
CTCTTGGTATTTATCCAAAC+TGG - chr8.1:82000581-82000600 MS.gene072150:intron 35.0%
CTGTTATCAAGAAGTTAGAG+TGG + chr8.1:82005379-82005398 None:intergenic 35.0%
GAAAGACAAACTTCAACAAG+AGG - chr8.1:82001480-82001499 MS.gene072150:intron 35.0%
GAAATACATTCTGGTGAAAG+TGG - chr8.1:81999675-81999694 MS.gene072150:intron 35.0%
GAACTGGAAATACATAGACA+TGG - chr8.1:82005311-82005330 MS.gene072150:intron 35.0%
GACTTGTATTGAGAAATCTC+TGG - chr8.1:82005221-82005240 MS.gene072150:intron 35.0%
GAGAATGAAAGTGAAGGAAA+AGG + chr8.1:82004773-82004792 None:intergenic 35.0%
GAGAATGATTCTCAAAACAG+AGG - chr8.1:82003948-82003967 MS.gene072150:intron 35.0%
GCAATCATGACAAATTGGTT+TGG + chr8.1:82003428-82003447 None:intergenic 35.0%
GTAGAAGAGAATGAAAGTGA+AGG + chr8.1:82004779-82004798 None:intergenic 35.0%
GTATAATTGACGTCATCAAC+AGG + chr8.1:82004961-82004980 None:intergenic 35.0%
GTCAGTTGTATTAGCAAAAG+TGG - chr8.1:82002771-82002790 MS.gene072150:intron 35.0%
GTGAAGGAAAAGGAAATGAA+GGG + chr8.1:82004763-82004782 None:intergenic 35.0%
GTTAGAGTGGTTATTTGAGT+GGG + chr8.1:82005366-82005385 None:intergenic 35.0%
GTTTATTGCTTGAGCTGAAT+TGG - chr8.1:82001530-82001549 MS.gene072150:intron 35.0%
GTTTCTGTTGTTGAAGTCTA+TGG - chr8.1:82000375-82000394 MS.gene072150:intron 35.0%
TAGTCTGTCAAAAAGGCTAT+AGG - chr8.1:82000032-82000051 MS.gene072150:intron 35.0%
TATATGTAAGGTGTGGTTAG+GGG - chr8.1:82002595-82002614 MS.gene072150:intron 35.0%
TCTTCAAAAACAAAGGCAGT+CGG + chr8.1:82002525-82002544 None:intergenic 35.0%
TGTGCATAATTGTCAGGTTA+TGG - chr8.1:82001758-82001777 MS.gene072150:intron 35.0%
TGTGCGTTCAGTTCTTTAAA+TGG - chr8.1:82004736-82004755 MS.gene072150:intron 35.0%
TGTTTGTGGATATAGGAGTT+TGG - chr8.1:82000875-82000894 MS.gene072150:intron 35.0%
TTCAAATGAGATAAGGCACA+GGG - chr8.1:82004121-82004140 MS.gene072150:intron 35.0%
TTTACCAAATAGAGCCTACA+TGG + chr8.1:81999823-81999842 None:intergenic 35.0%
TTTCAAATGAGATAAGGCAC+AGG - chr8.1:82004120-82004139 MS.gene072150:intron 35.0%
TTTGTACCCGTTTCTATCAA+CGG + chr8.1:82005177-82005196 None:intergenic 35.0%
! ACTATGACTTTCACTAGTCT+AGG + chr8.1:82002289-82002308 None:intergenic 35.0%
! AGTGGAGTTTTCATTGTTTG+TGG - chr8.1:82000861-82000880 MS.gene072150:intron 35.0%
! GCATTTTAAGCCAGAATATC+GGG + chr8.1:82004904-82004923 None:intergenic 35.0%
! GGCATTTTAAGCCAGAATAT+CGG + chr8.1:82004905-82004924 None:intergenic 35.0%
! GTATTGAGTTGTTATTGGGT+GGG + chr8.1:82004182-82004201 None:intergenic 35.0%
! TAGACTAGTTGGATAGAAAC+TGG - chr8.1:82003871-82003890 MS.gene072150:CDS 35.0%
! TGCAGGTATTGTACTCAAAA+TGG + chr8.1:82001610-82001629 None:intergenic 35.0%
!! CATTGACTTTGATGATGATG+AGG - chr8.1:82005765-82005784 MS.gene072150:intron 35.0%
!! GACTTTTTCTTTGGTTATGC+AGG + chr8.1:82000347-82000366 None:intergenic 35.0%
!! TTCGTCTCTGAAATGTTACT+TGG - chr8.1:82002897-82002916 MS.gene072150:intron 35.0%
!! TTTAATCTGGAAGCACCTAT+TGG + chr8.1:81999712-81999731 None:intergenic 35.0%
!! TTTTGAGAATCATTCTCCAG+AGG + chr8.1:82003945-82003964 None:intergenic 35.0%
!!! ACAAGGTGAAACTTTTTTGG+GGG + chr8.1:82004388-82004407 None:intergenic 35.0%
!!! AGCACCGATTTTGAAGTTTT+TGG + chr8.1:82005147-82005166 None:intergenic 35.0%
!!! AGGACAAGGTGAAACTTTTT+TGG + chr8.1:82004391-82004410 None:intergenic 35.0%
!!! CTGTTGAAACATTTTTGGCA+TGG - chr8.1:82002989-82003008 MS.gene072150:intron 35.0%
!!! GACAAGGTGAAACTTTTTTG+GGG + chr8.1:82004389-82004408 None:intergenic 35.0%
!!! GCGTGTATTTTAGTCATAAG+TGG + chr8.1:82003608-82003627 None:intergenic 35.0%
!!! GGACAAGGTGAAACTTTTTT+GGG + chr8.1:82004390-82004409 None:intergenic 35.0%
!!! TGAAACATTTTTGGCATGGA+GGG - chr8.1:82002993-82003012 MS.gene072150:intron 35.0%
!!! TTGAAACATTTTTGGCATGG+AGG - chr8.1:82002992-82003011 MS.gene072150:intron 35.0%
AAAAGTTTCACCTTGTCCTC+AGG - chr8.1:82004392-82004411 MS.gene072150:intron 40.0%
AAAGTTTCACCTTGTCCTCA+GGG - chr8.1:82004393-82004412 MS.gene072150:intron 40.0%
AACAGTAACTGCTTCTCCAT+GGG + chr8.1:82002974-82002993 None:intergenic 40.0%
AACTGAACGCACAAAGAAGA+GGG + chr8.1:82004729-82004748 None:intergenic 40.0%
ACAAGCTCATGAGAAAACGA+CGG - chr8.1:82000071-82000090 MS.gene072150:intron 40.0%
ACTCACTAACCAATGAACCT+TGG + chr8.1:82002337-82002356 None:intergenic 40.0%
AGCCTGCAATCATGACAAAT+TGG + chr8.1:82003433-82003452 None:intergenic 40.0%
AGGATTAAGGTTGCTTGACA+TGG - chr8.1:82002239-82002258 MS.gene072150:intron 40.0%
AGTAACTTCAACACCTCTGT+CGG - chr8.1:82005011-82005030 MS.gene072150:intron 40.0%
ATCTGTCTTGGCAATTGTAC+AGG - chr8.1:82001008-82001027 MS.gene072150:intron 40.0%
ATCTTGAGTTCCAAACCCAT+CGG + chr8.1:82001734-82001753 None:intergenic 40.0%
ATGCAAAACTTGTGTTCCAC+AGG - chr8.1:82001789-82001808 MS.gene072150:intron 40.0%
ATTTGAATGACAACCAGTGC+AGG + chr8.1:82001627-82001646 None:intergenic 40.0%
CAAAGAAAGAGGGAAGGTAA+TGG + chr8.1:82000908-82000927 None:intergenic 40.0%
CCAGATTAAAATCACTGCTC+AGG - chr8.1:81999722-81999741 MS.gene072150:intron 40.0%
CTCCACGTAAGAATAACAGA+AGG + chr8.1:82002816-82002835 None:intergenic 40.0%
GAAGCTACATCGATGTTAGA+AGG - chr8.1:82002219-82002238 MS.gene072150:intron 40.0%
GACGAGTCAAATACTAATCC+AGG - chr8.1:82001042-82001061 MS.gene072150:intron 40.0%
GAGAGCTGGAGATTGAAATT+TGG + chr8.1:81999415-81999434 None:intergenic 40.0%
GTACGGCAGTTGACATTAAT+TGG + chr8.1:82001354-82001373 None:intergenic 40.0%
GTGAAAAGTCACGATTCTCT+TGG - chr8.1:82000565-82000584 MS.gene072150:intron 40.0%
GTGACACCTGATTATCAGTA+GGG - chr8.1:82003112-82003131 MS.gene072150:intron 40.0%
GTGGTTTAAGCACTTCCAAT+AGG - chr8.1:81999694-81999713 MS.gene072150:intron 40.0%
TAACCACACGTTAGACTAGT+TGG - chr8.1:82003860-82003879 MS.gene072150:intron 40.0%
TAGTCCATGTAGGCTCTATT+TGG - chr8.1:81999816-81999835 MS.gene072150:intron 40.0%
TCGAAGGAAAAGAAACTCAC+TGG - chr8.1:82003478-82003497 MS.gene072150:CDS 40.0%
TGACACCTGATTATCAGTAG+GGG - chr8.1:82003113-82003132 MS.gene072150:intron 40.0%
TGTGACACCTGATTATCAGT+AGG - chr8.1:82003111-82003130 MS.gene072150:intron 40.0%
TGTGTGGTTACGAGGTAATT+TGG + chr8.1:82004501-82004520 None:intergenic 40.0%
TTGGTACATCATGCCGAAAA+TGG + chr8.1:82005128-82005147 None:intergenic 40.0%
TTGTACCCGTTTCTATCAAC+GGG + chr8.1:82005176-82005195 None:intergenic 40.0%
TTGTTAGCTCAGCTAAAGAG+TGG - chr8.1:82001848-82001867 MS.gene072150:CDS 40.0%
TTTATGTGATTGTGAGGAGG+AGG + chr8.1:82000963-82000982 None:intergenic 40.0%
TTTGAGTACAATACCTGCAC+TGG - chr8.1:82001611-82001630 MS.gene072150:intron 40.0%
! AGCATTGGAAGCTATACTCA+TGG - chr8.1:81999540-81999559 MS.gene072150:intron 40.0%
! ATTTCCGAGCATTTGTTACG+TGG - chr8.1:82002025-82002044 MS.gene072150:intron 40.0%
! CTGATACCCGTTGATAGAAA+CGG - chr8.1:82005167-82005186 MS.gene072150:intron 40.0%
! CTTTTGCAGCTTTCGTACTA+TGG - chr8.1:82000635-82000654 MS.gene072150:intron 40.0%
! GATGATGATGAGGATTTCGA+AGG - chr8.1:82005775-82005794 MS.gene072150:intron 40.0%
! GGTATTGAGTTGTTATTGGG+TGG + chr8.1:82004183-82004202 None:intergenic 40.0%
! TATCCAACTAGTCTAACGTG+TGG + chr8.1:82003866-82003885 None:intergenic 40.0%
! TGATACCCGTTGATAGAAAC+GGG - chr8.1:82005168-82005187 MS.gene072150:intron 40.0%
! TTTCACTAGTCTAGGTACAC+TGG + chr8.1:82002281-82002300 None:intergenic 40.0%
! TTTTGTTGCAGCTCAACAAC+TGG - chr8.1:82001229-82001248 MS.gene072150:intron 40.0%
!! AATTCTTGGTGCCTCCAAAA+TGG - chr8.1:82003661-82003680 MS.gene072150:intron 40.0%
!! ATTCTTGGTGCCTCCAAAAT+GGG - chr8.1:82003662-82003681 MS.gene072150:intron 40.0%
!! CCTGAGCAGTGATTTTAATC+TGG + chr8.1:81999725-81999744 None:intergenic 40.0%
!! TCCAAACTGGCTTTATGTCA+TGG - chr8.1:82000594-82000613 MS.gene072150:intron 40.0%
!!! CAAGGTGAAACTTTTTTGGG+GGG + chr8.1:82004387-82004406 None:intergenic 40.0%
!!! GCAAAACGGTGTCGTTTTAA+TGG + chr8.1:81999453-81999472 None:intergenic 40.0%
ACAGTAACTGCTTCTCCATG+GGG + chr8.1:82002973-82002992 None:intergenic 45.0%
ACGACCACGTAACAAATGCT+CGG + chr8.1:82002032-82002051 None:intergenic 45.0%
AGAAGTAGAGTGACAGAGCA+TGG - chr8.1:82004454-82004473 MS.gene072150:intron 45.0%
AGAGAACCAACCTCTAACCA+TGG + chr8.1:82005343-82005362 None:intergenic 45.0%
AGATTTGGATGAGGAGGATG+AGG - chr8.1:82005738-82005757 MS.gene072150:intron 45.0%
AGCTGTTGTCACGGAAGATT+TGG - chr8.1:82005723-82005742 MS.gene072150:intron 45.0%
ATACAACTGACCCGAACTAC+AGG + chr8.1:82002762-82002781 None:intergenic 45.0%
ATGAAGGAGTTCCTTCCTGT+GGG + chr8.1:82004613-82004632 None:intergenic 45.0%
CAACAGTAACTGCTTCTCCA+TGG + chr8.1:82002975-82002994 None:intergenic 45.0%
CAGCGACAAAAGCCTATAAC+TGG - chr8.1:82004537-82004556 MS.gene072150:intron 45.0%
CCACAGGCATCTGAAAATCT+TGG - chr8.1:82001805-82001824 MS.gene072150:intron 45.0%
CGACAAAAGCCTATAACTGG+CGG - chr8.1:82004540-82004559 MS.gene072150:intron 45.0%
CGCCTTCTGTTATTCTTACG+TGG - chr8.1:82002811-82002830 MS.gene072150:intron 45.0%
CGGTATTGTGAAGACTCAGA+TGG - chr8.1:82001880-82001899 MS.gene072150:CDS 45.0%
CTAAAGAGTGGTTGACTGAG+CGG - chr8.1:82001860-82001879 MS.gene072150:CDS 45.0%
CTTCAAATGTGCTAAGCCTC+TGG - chr8.1:82002638-82002657 MS.gene072150:intron 45.0%
GAACTGAACGCACAAAGAAG+AGG + chr8.1:82004730-82004749 None:intergenic 45.0%
GAATAAATAGGGAAAGGGCC+AGG + chr8.1:82004225-82004244 None:intergenic 45.0%
GACAGTGGTTTGAAAGTGGA+AGG - chr8.1:82003503-82003522 MS.gene072150:CDS 45.0%
GACCTGCTCACATTCAAAAG+CGG + chr8.1:82001296-82001315 None:intergenic 45.0%
GACGTCATCAACAGGTTAGT+TGG + chr8.1:82004953-82004972 None:intergenic 45.0%
GAGGAACGTTTCGGAAAAGA+GGG + chr8.1:82005057-82005076 None:intergenic 45.0%
GCAACAATAAGGGGCTTACT+TGG + chr8.1:82003052-82003071 None:intergenic 45.0%
GCAATTGTACAGGAGGAAGA+TGG - chr8.1:82001018-82001037 MS.gene072150:intron 45.0%
GCCATGACATAAAGCCAGTT+TGG + chr8.1:82000598-82000617 None:intergenic 45.0%
GGACGCATTAACCACTAGTA+TGG + chr8.1:82003787-82003806 None:intergenic 45.0%
GGCATCTGAAAATCTTGGCA+TGG - chr8.1:82001810-82001829 MS.gene072150:intron 45.0%
GGTTGCATTAGTGTCTACCA+GGG - chr8.1:82004421-82004440 MS.gene072150:intron 45.0%
GTCAGTCAAAGAAAGAGGGA+AGG + chr8.1:82000914-82000933 None:intergenic 45.0%
GTCCATTATCCGCCAGTTAT+AGG + chr8.1:82004552-82004571 None:intergenic 45.0%
GTGGTTACGAGGTAATTTGG+TGG + chr8.1:82004498-82004517 None:intergenic 45.0%
GTGGTTTGAAAGTGGAAGGA+TGG - chr8.1:82003507-82003526 MS.gene072150:CDS 45.0%
TACTAGTGGTTAATGCGTCC+TGG - chr8.1:82003787-82003806 MS.gene072150:intron 45.0%
TATGCTGCACAATGACCGAT+GGG - chr8.1:82001716-82001735 MS.gene072150:intron 45.0%
TCAGAGTCATTGAAGGCTCA+CGG + chr8.1:82004838-82004857 None:intergenic 45.0%
TCTAGATAACCCACTATGCC+TGG - chr8.1:82004204-82004223 MS.gene072150:intron 45.0%
TGAGGAACGTTTCGGAAAAG+AGG + chr8.1:82005058-82005077 None:intergenic 45.0%
TGTCACGGAAGATTTGGATG+AGG - chr8.1:82005729-82005748 MS.gene072150:intron 45.0%
TGTCTTGGCAATTGTACAGG+AGG - chr8.1:82001011-82001030 MS.gene072150:intron 45.0%
TTAAGGGCTTACGCATCTCA+GGG - chr8.1:82003139-82003158 MS.gene072150:intron 45.0%
TTAAGGTTGCTTGACATGGC+AGG - chr8.1:82002243-82002262 MS.gene072150:intron 45.0%
TTATGCTGCACAATGACCGA+TGG - chr8.1:82001715-82001734 MS.gene072150:intron 45.0%
TTTAAGGGCTTACGCATCTC+AGG - chr8.1:82003138-82003157 MS.gene072150:intron 45.0%
! ACGACTTTTGTGTGGTTACG+AGG + chr8.1:82004509-82004528 None:intergenic 45.0%
! AGCCTATAACTGGCGGATAA+TGG - chr8.1:82004547-82004566 MS.gene072150:intron 45.0%
! CAGTTATAGGCTTTTGTCGC+TGG + chr8.1:82004539-82004558 None:intergenic 45.0%
! CCAAGATTTTCAGATGCCTG+TGG + chr8.1:82001808-82001827 None:intergenic 45.0%
! GAGCACTAACGACTTTTGTG+TGG + chr8.1:82004517-82004536 None:intergenic 45.0%
! GCTAGCATTGAGGAACGTTT+CGG + chr8.1:82005066-82005085 None:intergenic 45.0%
! TCTTAGATAGTGGTACCCCA+TGG - chr8.1:82002955-82002974 MS.gene072150:intron 45.0%
! TTTGAAGTGCAATCCAACCC+TGG + chr8.1:82002625-82002644 None:intergenic 45.0%
!! AAAAGTGCTACGGGTCTGTT+TGG + chr8.1:82000203-82000222 None:intergenic 45.0%
!! ACAAATTGGTTTGGCGTCAG+AGG + chr8.1:82003419-82003438 None:intergenic 45.0%
!! CAAATTGGTTTGGCGTCAGA+GGG + chr8.1:82003418-82003437 None:intergenic 45.0%
!! GAGGTGTTGAAGTTACTCAG+AGG + chr8.1:82005008-82005027 None:intergenic 45.0%
!! GGCATAGTGGGTTATCTAGA+AGG + chr8.1:82004204-82004223 None:intergenic 45.0%
!! GGTTAGTGAGTGCTGAGTAA+TGG - chr8.1:82002346-82002365 MS.gene072150:CDS 45.0%
!! TAACTGGCGGATAATGGACT+CGG - chr8.1:82004553-82004572 MS.gene072150:intron 45.0%
!! TAATGGACTCGGCAACGAAA+TGG - chr8.1:82004564-82004583 MS.gene072150:intron 45.0%
!!! CATTTTTGGCATGGAGGGAA+AGG - chr8.1:82002998-82003017 MS.gene072150:intron 45.0%
AAAGAGGGAAACACCAGAGG+AGG + chr8.1:82005042-82005061 None:intergenic 50.0%
AGAAACTCACTGGCAGACAG+TGG - chr8.1:82003488-82003507 MS.gene072150:CDS 50.0%
ATGGTTTCGGCCATGGTTAG+AGG - chr8.1:82005330-82005349 MS.gene072150:intron 50.0%
CACGGAAGATTTGGATGAGG+AGG - chr8.1:82005732-82005751 MS.gene072150:intron 50.0%
CATAGACATGGTTTCGGCCA+TGG - chr8.1:82005323-82005342 MS.gene072150:intron 50.0%
CTACGCGCAAGAGCAAGAAA+TGG - chr8.1:81999510-81999529 MS.gene072150:intron 50.0%
CTGCTCACATTCAAAAGCGG+AGG + chr8.1:82001293-82001312 None:intergenic 50.0%
GAAGTAGCAAGCACAGACTC+TGG + chr8.1:82003460-82003479 None:intergenic 50.0%
GATGAAGGAGTTCCTTCCTG+TGG + chr8.1:82004614-82004633 None:intergenic 50.0%
GGAAAAGAGGGAAACACCAG+AGG + chr8.1:82005045-82005064 None:intergenic 50.0%
GGCAATACGTCCCGATATTC+TGG - chr8.1:82004891-82004910 MS.gene072150:intron 50.0%
GGCAGACAGTGGTTTGAAAG+TGG - chr8.1:82003499-82003518 MS.gene072150:CDS 50.0%
GGGTTGCATTAGTGTCTACC+AGG - chr8.1:82004420-82004439 MS.gene072150:intron 50.0%
GTCGTGAAGCATGGACAAAG+CGG - chr8.1:82002047-82002066 MS.gene072150:intron 50.0%
TAATGCAACCCTTCACCCTG+AGG + chr8.1:82004411-82004430 None:intergenic 50.0%
TGAAGGAGTTCCTTCCTGTG+GGG + chr8.1:82004612-82004631 None:intergenic 50.0%
TGATGCTGAAGCAGAAGAGG+CGG - chr8.1:82001903-82001922 MS.gene072150:intron 50.0%
TGTTACGTGGTCGTGAAGCA+TGG - chr8.1:82002038-82002057 MS.gene072150:intron 50.0%
TTCAAAAGCGGAGGTTCGTC+TGG + chr8.1:82001284-82001303 None:intergenic 50.0%
TTGGCGTGCATGCAACATTC+TGG + chr8.1:82004086-82004105 None:intergenic 50.0%
TTTCGGCCATGGTTAGAGGT+TGG - chr8.1:82005334-82005353 MS.gene072150:intron 50.0%
! AATGTGCTAAGCCTCTGGAG+TGG - chr8.1:82002643-82002662 MS.gene072150:intron 50.0%
! GAAAGGTGCAGCTGTTGTCA+CGG - chr8.1:82005714-82005733 MS.gene072150:intron 50.0%
! GAGTTGTTATTGGGTGGGAG+AGG + chr8.1:82004177-82004196 None:intergenic 50.0%
! GTCTGTGCTTGCTACTTCGA+AGG - chr8.1:82003462-82003481 MS.gene072150:CDS 50.0%
! TGCACAATGACCGATGGGTT+TGG - chr8.1:82001721-82001740 MS.gene072150:intron 50.0%
! TGGTGATGCTGAAGCAGAAG+AGG - chr8.1:82001900-82001919 MS.gene072150:CDS 50.0%
!! ATGTGCTAAGCCTCTGGAGT+GGG - chr8.1:82002644-82002663 MS.gene072150:intron 50.0%
!! CATAGTGGGTGCTAGCATTG+AGG + chr8.1:82005076-82005095 None:intergenic 50.0%
!! CTCCGCTTTTGAATGTGAGC+AGG - chr8.1:82001291-82001310 MS.gene072150:intron 50.0%
AACCCTTCACCCTGAGGACA+AGG + chr8.1:82004405-82004424 None:intergenic 55.0%
AGAGGAGGAGAAACCGACAG+AGG + chr8.1:82005027-82005046 None:intergenic 55.0%
CACCTTGTCCTCAGGGTGAA+GGG - chr8.1:82004400-82004419 MS.gene072150:intron 55.0%
CGCTCGCATGGAAGAATGTG+TGG + chr8.1:82005945-82005964 None:intergenic 55.0%
GCAACGAAATGGCGGTTGGA+TGG - chr8.1:82004575-82004594 MS.gene072150:intron 55.0%
GCTCACGGTTCATGCGATGA+AGG + chr8.1:82004823-82004842 None:intergenic 55.0%
GTGTTCACCGATAGTCGCAC+TGG + chr8.1:82004983-82005002 None:intergenic 55.0%
TCACCTTGTCCTCAGGGTGA+AGG - chr8.1:82004399-82004418 MS.gene072150:intron 55.0%
TGACAGAGCATGGCAGCAGT+AGG - chr8.1:82004464-82004483 MS.gene072150:intron 55.0%
TGGACTCGGCAACGAAATGG+CGG - chr8.1:82004567-82004586 MS.gene072150:intron 55.0%
TGGCGGTTGGATGGACACTA+TGG - chr8.1:82004584-82004603 MS.gene072150:intron 55.0%
!! GTGTGGTTAGGGGTGTTCCA+GGG - chr8.1:82002605-82002624 MS.gene072150:intron 55.0%
!! TCTGTCGGTTTCTCCTCCTC+TGG - chr8.1:82005026-82005045 MS.gene072150:intron 55.0%
!! TGTGCTAAGCCTCTGGAGTG+GGG - chr8.1:82002645-82002664 MS.gene072150:intron 55.0%
ACACACACACCCCACTCCAG+AGG + chr8.1:82002657-82002676 None:intergenic 60.0%
AGGGAAAGGGCCAGGCATAG+TGG + chr8.1:82004217-82004236 None:intergenic 60.0%
CACTATGGTGCCCCACAGGA+AGG - chr8.1:82004599-82004618 MS.gene072150:intron 60.0%
CTCGGCAACGAAATGGCGGT+TGG - chr8.1:82004571-82004590 MS.gene072150:intron 60.0%
GGGAAAGGGCCAGGCATAGT+GGG + chr8.1:82004216-82004235 None:intergenic 60.0%
TGGACACTATGGTGCCCCAC+AGG - chr8.1:82004595-82004614 MS.gene072150:intron 60.0%
!! GGTGTGGTTAGGGGTGTTCC+AGG - chr8.1:82002604-82002623 MS.gene072150:intron 60.0%
!! GGTTAGGGGTGTTCCAGGGT+TGG - chr8.1:82002609-82002628 MS.gene072150:intron 60.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 81999399 82005970 81999399 ID=MS.gene072150
chr8.1 mRNA 81999399 82005970 81999399 ID=MS.gene072150.t1;Parent=MS.gene072150
chr8.1 exon 82005964 82005970 82005964 ID=MS.gene072150.t1.exon1;Parent=MS.gene072150.t1
chr8.1 CDS 82005964 82005970 82005964 ID=cds.MS.gene072150.t1;Parent=MS.gene072150.t1
chr8.1 exon 82005795 82005860 82005795 ID=MS.gene072150.t1.exon2;Parent=MS.gene072150.t1
chr8.1 CDS 82005795 82005860 82005795 ID=cds.MS.gene072150.t1;Parent=MS.gene072150.t1
chr8.1 exon 82005626 82005693 82005626 ID=MS.gene072150.t1.exon3;Parent=MS.gene072150.t1
chr8.1 CDS 82005626 82005693 82005626 ID=cds.MS.gene072150.t1;Parent=MS.gene072150.t1
chr8.1 exon 82004306 82004339 82004306 ID=MS.gene072150.t1.exon4;Parent=MS.gene072150.t1
chr8.1 CDS 82004306 82004339 82004306 ID=cds.MS.gene072150.t1;Parent=MS.gene072150.t1
chr8.1 exon 82004057 82004129 82004057 ID=MS.gene072150.t1.exon5;Parent=MS.gene072150.t1
chr8.1 CDS 82004057 82004129 82004057 ID=cds.MS.gene072150.t1;Parent=MS.gene072150.t1
chr8.1 exon 82003868 82003925 82003868 ID=MS.gene072150.t1.exon6;Parent=MS.gene072150.t1
chr8.1 CDS 82003868 82003925 82003868 ID=cds.MS.gene072150.t1;Parent=MS.gene072150.t1
chr8.1 exon 82003433 82003558 82003433 ID=MS.gene072150.t1.exon7;Parent=MS.gene072150.t1
chr8.1 CDS 82003433 82003558 82003433 ID=cds.MS.gene072150.t1;Parent=MS.gene072150.t1
chr8.1 exon 82002317 82002408 82002317 ID=MS.gene072150.t1.exon8;Parent=MS.gene072150.t1
chr8.1 CDS 82002317 82002408 82002317 ID=cds.MS.gene072150.t1;Parent=MS.gene072150.t1
chr8.1 exon 82001841 82001919 82001841 ID=MS.gene072150.t1.exon9;Parent=MS.gene072150.t1
chr8.1 CDS 82001841 82001919 82001841 ID=cds.MS.gene072150.t1;Parent=MS.gene072150.t1
chr8.1 exon 81999573 81999654 81999573 ID=MS.gene072150.t1.exon10;Parent=MS.gene072150.t1
chr8.1 CDS 81999573 81999654 81999573 ID=cds.MS.gene072150.t1;Parent=MS.gene072150.t1
chr8.1 exon 81999399 81999478 81999399 ID=MS.gene072150.t1.exon11;Parent=MS.gene072150.t1
chr8.1 CDS 81999399 81999478 81999399 ID=cds.MS.gene072150.t1;Parent=MS.gene072150.t1
Gene Sequence

>MS.gene072150

ATGACAGGTATTCCCAAATTTCAATCTCCAGCTCTCCAATTTCATTCTATTCCATTAAAACGACACCGTTTTGCTAACCCTTTTTGATTTTTCATCATTATTGCACACAGACTACGCGCAAGAGCAAGAAATGGAGATTGAAGCATTGGAAGCTATACTCATGGATGAATTCAAAGGTTTTTTTCTTGTTTGCCCATTTATTTATTTTAATAAAAAAGATATTTTTATTTCTCAATTTCGTTTTCTTATTCAAAAATTGCTTCATTTTTCATGTTAGAAATACATTCTGGTGAAAGTGGTTTAAGCACTTCCAATAGGTGCTTCCAGATTAAAATCACTGCTCAGGTAAATTCATTGTTATTTACTTCTTTTTGTGTATTTATGTATATAAGTTCTTGGGTATAAAAATGTTTTTTTTAGTCCATGTAGGCTCTATTTGGTAAAATAAATTGCGGATATGTGATAAGCTAGCTTATAGCTGATTGAATTTGTAGTGTTTGGTAAAATTAGTGGTTGAACTAGCTTTATTAATATGAAATAACATAGAAAAGTTATGGTTAATTAATATTTAAGTTTTTTTCAATTAAGATAACCAGTGTAAATTTGAGAGAAAAAATGATAAGATATAAGCTTTAGTCTGTCAAAAAGGCTATAGGATAGTAAGAATAAACTACAAGCTCATGAGAAAACGACGGTTATCAAACGAATTATTTTAGTCATCGAGCTTATAAGATACAAGCTATCAGCTATAAATTAGTATCTTTTTTTTGAGGGAAGCTATAAATTAGCTTGCTGTGCTTACCAAACAGACCCGTAGCACTTTTTTGTATTTACAAATTACAAAATTGCATGCTTTTATGTTTATATATTTTTTAATCAAATCTGAGGAGTTGATTTATGGAAGAATACAATGCTATTTTTTTATACGTGTAATATCTAGCTTACCCTGCATAACCAAAGAAAAAGTCATGTTGTTGTTTCTGTTGTTGAAGTCTATGGTAGAGTTTGAATTAGTTTTTTAGCTAATGGGAGATTACCAGTTATATAAATTATGTTATGTTTCTTCACTTACAAAAATGGTTCTTATCAAGTTGTAGATGTTTATAGAGAAGTTGAATGGGACAGCTTTTAAAAAAATTGAGATGCATAAGTTAATTTCAACTAATGTGAAAAGTCACGATTCTCTTGGTATTTATCCAAACTGGCTTTATGTCATGGCTAGTCTTAACTGTTGATCTTTTGCAGCTTTCGTACTATGGAATCAATCCGTGTTTGAGTTATATTGTTGCTATTAATATGTTTTGATTACTTGAGCAAAATTTACCTTGTTTTTATTATTTTAGAACTAAATAAGAACAGAATATTTTCCTATTGTATGTACTGGATGAATTTCAATGAAATTATTTGGAGTTATATATGTTAGCGTCTTCTTCCAGCTTAAAGTAAATTGTTCACACAATTTAGTGGAGTTTTCATTGTTTGTGGATATAGGAGTTTGGTTTATTTCCATTACCTTCCCTCTTTCTTTGACTGACATAATGTGCTTATGCAACTGAGATATCCTCCTCCTCACAATCACATAAATTTGGAAAAAGTGACCCTTATATTTATCTGTCTTGGCAATTGTACAGGAGGAAGATGGAGACGAGTCAAATACTAATCCAGGTTTCTTCCTCTTTGATATATTATTTTCTTTTCCATCTTGTCTTTCAGTTTTTGTGAAACTTTAGATTTTAGAATATCATGTCGTTGTCTTAATATATGACTTTAATTTTGGAGCTTATTTACCAAAATCCTCTGATGGTAATATACAAAAGACATGGTTGATAATTTTGTTGCAGCTCAACAACTGGCTTTGATCTTCGCGCACACAGAAAAATATCCAGACGAACCTCCGCTTTTGAATGTGAGCAGGTCAGTAGTTTTAAATATTTTTACTGTTGTTTGTATGTCCAATTAATGTCAACTGCCGTACATATTTTTTTGTTTCATTTTTTGTATACTCATTTTGAGACGCTTTTGTTATATTTCACTATACAAAACAGTTTGCAAGGAATATCGTCTGAAGATTTAAGGATTTTGAAAGACAAACTTCAACAAGAGGTGATCTTTAACCATATGCAGTTTTTCTGTTTATTGCTTGAGCTGAATTGGTCTTTGTTCTATACTTGCACTTGTTGTCATCCAAATTGAAAGACTTCTTAATGGCCATTTTGAGTACAATACCTGCACTGGTTGTCATTCAAATTGAAAGAATTCTTAATGGCCATTTTGAATACAATGTTTCCACCTTTATGTATATACGCATAAGCATTTTTATGCTGCACAATGACCGATGGGTTTGGAACTCAAGATTTGTTGTGCATAATTGTCAGGTTATGGAAATTTTGATGCAAAACTTGTGTTCCACAGGCATCTGAAAATCTTGGCATGGCTATGATTTACACACTTGTTAGCTCAGCTAAAGAGTGGTTGACTGAGCGGTATTGTGAAGACTCAGATGGTGATGCTGAAGCAGAAGAGGCGGCCAAAGAAGATGTAAGAATGCCTACAGTATATAATGATAGTTTTTTATGTTAATTAAATGCTTTCTGAGTTTCAAGTATAAAACATTTGTTCTGTTGAGATTTCCGAGCATTTGTTACGTGGTCGTGAAGCATGGACAAAGCGGACATGATAATATTATTGGAATCAGATAATATATAATATTATTGGAATCAGATAATATTCGATTTGGATATGCATATATGCACATTTATGTCTAAAGAATATAGAGCTTTTAACTGTATTCGATTTCCCCTCTTTTTTTATAAATCTTCTGAAGCTACATCGATGTTAGAAGGATTAAGGTTGCTTGACATGGCAGGATACTTATTACGCCAGTGTACCTAGACTAGTGAAAGTCATAGTAGTATGCCTTTATTAAACTTCATATCCAAGGTTCATTGGTTAGTGAGTGCTGAGTAATGGTAGCAAGATCACTTATACTGAATGTTACATTATCTCTATGATATTTTCACCAAGGCTGAATCTAGATTTTATGCTTTGGTTAACAGAAGTAATCTTTTCTGCTCAAATATTTGCATACCCGTGTTTAACCCAACTTTGTTTTCAAAGACAATGCCGACTGCCTTTGTTTTTGAAGACAATGCTGATCACTACCATTATCCTTTATCAAAAGTTGACTAGCAGATAATATATGTAAGGTGTGGTTAGGGGTGTTCCAGGGTTGGATTGCACTTCAAATGTGCTAAGCCTCTGGAGTGGGGTGTGTGTGTGTGATTCTTACAAAAGTTACCTAGTTATTGCACATGGTAGATGAGCATCATGATTATGATTATAGTATGTTTAAAGTATAATCCTGTAGTTCGGGTCAGTTGTATTAGCAAAAGTGGCAGTAGTGATTTTTTTACGCCTTCTGTTATTCTTACGTGGAGTAAATTTAAAATGAAGATATGTTTTCTTCTGTCATATATGTTCTTTTTACAATTTTTCACATTCGTCTCTGAAATGTTACTTGGAAAAAGCTGGCTAACAATTTTTTATCCTTCAACATTCTTAGATAGTGGTACCCCATGGAGAAGCAGTTACTGTTGAAACATTTTTGGCATGGAGGGAAAGGTTTGAAGCTGAACTAGCACTTGAACGAGCCAAGTAAGCCCCTTATTGTTGCTCTTGTTGTATAGCACATAATTTTTAAATACAAAGCATTTGTGACACCTGATTATCAGTAGGGGATTTTAAGGGCTTACGCATCTCAGGGAGAGTTTAAAAGAAAATGGGTGGGATTTGTGAATTTGTAAGTAGCATTTATAGCAAATAATAGAACATAGTCAGTGATATTTAAAGGGATTATTACAATCTTCAACCCAAATTCTTTTGTTTTTAACAAGTGAAGTCATTGAAAATAGAAAATAGTAAGTGATATTTAAATGGATTATTACAATCTCCAACCCAAATCCTTTTGTTTTTAACAAGTGAAGTCATTGAAGGTTGAGAGCTGCTGTAACAACTTTCCCTCTGACGCCAAACCAATTTGTCATGATTGCAGGCTAATGCCAGAGTCTGTGCTTGCTACTTCGAAGGAAAAGAAACTCACTGGCAGACAGTGGTTTGAAAGTGGAAGGATGGTACTTTTCTGCCTATTTATACCTTGATGCCTTAAAATGACATTTTCTATGTTATAAATTTCAAGCATATAATTTTCCACTTATGACTAAAATACACGCTGAACGTTGAATTAATTTATAGTTGATAAAAAAAATTCTTGGTGCCTCCAAAATGGGACATTAAAAATTGAGATAATTATTAGGAATGACATGTCACCTGTGAGCTATAAAATTATCATAATTAGCACAATAACCGTTCACTTGATTACAAAATGACCATACTAGTGGTTAATGCGTCCTGGCTTTTAAATTTGTTAGGATTTGTCTCACTTAAAACACTTAATAGCTTAATTAACCACACGTTAGACTAGTTGGATAGAAACTGGTATCTATGATTCAGAAAATTAAGGGGTAAACACAGTTTATTACTTTAACCTCTGGAGAATGATTCTCAAAACAGAGGAAGCTGTAATACAAATTACAGACACAATTTTGACAGAAATAGAATAAAGACAAAGGAAAATAGTAACACTAGGAATGCTTTGTTGATAGTAATTTTTGAAATCGGTTTACAACCAGAATGTTGCATGCACGCCAATAATTACAGTGAAGTTTCAAATGAGATAAGGCACAGGGCACAGTATCTCTTAGTTTTTGAGAGCTTAGCCTCTCCCACCCAATAACAACTCAATACCTTCTAGATAACCCACTATGCCTGGCCCTTTCCCTATTTATTCTTAATACAAACACACAACCGACAACATAATTAATGAATAAAAATCATATAACACAACTGCAACTGACTGACCAAAGTCAATTTTAATATTATCGGCCCCTCCTATTATAATGTCTCTTAATGAGAAGTCTAACAGTACTCCCCCCAAAAAAGTTTCACCTTGTCCTCAGGGTGAAGGGTTGCATTAGTGTCTACCAGGGTTCTATAATTAGAAGTAGAGTGACAGAGCATGGCAGCAGTAGGTCTTGTCTCCACCAAATTACCTCGTAACCACACAAAAGTCGTTAGTGCTCCAGCGACAAAAGCCTATAACTGGCGGATAATGGACTCGGCAACGAAATGGCGGTTGGATGGACACTATGGTGCCCCACAGGAAGGAACTCCTTCATCTTTTCTACATTTTTGACGGTCTCTTCATCACTCAGATCCTTCATTTTTCTTTCGATCTCTGAAATTTCACTTATGATATTCAACATTTCAATCCCTCTTCTTTGTGCGTTCAGTTCTTTAAATGGACCCTTCATTTCCTTTTCCTTCACTTTCATTCTCTTCTACTGTCTCATAAGAACTCGTGTTCCTTCATCGCATGAACCGTGAGCCTTCAATGACTCTGATTCAATTTTAGTTGCTCTTCTTCATAGAATATAGGCAATACGTCCCGATATTCTGGCTTAAAATGCCAAATAAATGTGAGCAATAACGTGCGCCAACTAACCTGTTGATGACGTCAATTATACCAGTGCGACTATCGGTGAACACAGCCTCTGAGTAACTTCAACACCTCTGTCGGTTTCTCCTCCTCTGGTGTTTCCCTCTTTTCCGAAACGTTCCTCAATGCTAGCACCCACTATGCATCTTTTTCTTCATCAAACACTAAAACTCCATTTTCGGCATGATGTACCAAAAACTTCAAAATCGGTGCTCTGATACCCGTTGATAGAAACGGGTACAAATACTAATTATACTGAATAACAAGTGACTTGTATTGAGAAATCTCTGGAGAATTACTCCCAATCAAAAGATAGAATACATGCATAAACACTGGTTCAGAATTGAATATTACACAGGAACTGGAAATACATAGACATGGTTTCGGCCATGGTTAGAGGTTGGTTCTCTCCCACTCAAATAACCACTCTAACTTCTTGATAACAGCATGCTTATCCTTTCGCTCTTTCTTCTTAGTTCTTGATACAAACAGACACAATTGACAACATAATTAATTAATAAAAACTATAATTACCATTTATTGAATTATAAAACAACAGCAACCAAAGCCAGTTTTAATAATATCGTCCCATCCTATTATAATGTCTAAAATGAGAGGTCTAGCACATGTCTACTGCTAGTACCTCTCAACAATTCTCTGTTAAATATTACAAGATCAGCAATGATACAAGTTAACCTAGTGCAAAAAAGGTTTTGTTATTGTTTTGTATAAATAATAGACATGTTTTGTGTTTGTTCACAGAAAGGTGCAGCTGTTGTCACGGAAGATTTGGATGAGGAGGATGAGGAAGACATTGACTTTGATGATGATGAGGATTTCGAAGGTATCTTATGCTCTCTATCCTTACTTTATATTCTATTTTGTCCAGAAAGTTTACATGTAATGATAAAATACATGTTTTATCTGTTTCTTGGCAGATGATGAAGATGATATGCTTGAGCATTATCTTGCTGAAAAATCTGATTCATCCACACATTCTTCCATGCGAGCGAGTTAA

Protein sequence

>MS.gene072150.t1

MTDYAQEQEMEIEALEAILMDEFKEIHSGESGLSTSNRCFQIKITAQEEDGDESNTNPAQQLALIFAHTEKYPDEPPLLNVSSLQGISSEDLRILKDKLQQEASENLGMAMIYTLVSSAKEWLTERYCEDSDGDAEAEEAAKEDIVVPHGEAVTVETFLAWRERFEAELALERAKLMPESVLATSKEKKLTGRQWFESGRMKGAAVVTEDLDEEDEEDIDFDDDEDFEDDEDDMLEHYLAEKSDSSTHSSMRAS