Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25217.t1 | RHN48808.1 | 95.8 | 625 | 26 | 0 | 1 | 625 | 1 | 625 | 4.00E-245 | 857.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25217.t1 | A0A396H7N9 | 95.8 | 625 | 26 | 0 | 1 | 625 | 1 | 625 | 2.9e-245 | 857.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene25217 | 0.844903 | 5.67E-59 | -1.69E-46 |
| MS.gene049254 | MS.gene25217 | 0.813721 | 2.22E-51 | -1.69E-46 |
| MS.gene049368 | MS.gene25217 | 0.803429 | 3.50E-49 | -1.69E-46 |
| MS.gene049452 | MS.gene25217 | 0.813287 | 2.76E-51 | -1.69E-46 |
| MS.gene049499 | MS.gene25217 | 0.810713 | 1.01E-50 | -1.69E-46 |
| MS.gene049801 | MS.gene25217 | 0.807131 | 5.87E-50 | -1.69E-46 |
| MS.gene049807 | MS.gene25217 | 0.810958 | 8.90E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene25217 | 0.831975 | 1.23E-55 | -1.69E-46 |
| MS.gene050224 | MS.gene25217 | 0.805784 | 1.13E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene25217 | 0.807243 | 5.56E-50 | -1.69E-46 |
| MS.gene050657 | MS.gene25217 | 0.803552 | 3.30E-49 | -1.69E-46 |
| MS.gene050759 | MS.gene25217 | 0.80819 | 3.50E-50 | -1.69E-46 |
| MS.gene050941 | MS.gene25217 | 0.817075 | 3.98E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene25217 | 0.805108 | 1.57E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene25217 | 0.822377 | 2.45E-53 | -1.69E-46 |
| MS.gene051490 | MS.gene25217 | 0.822188 | 2.71E-53 | -1.69E-46 |
| MS.gene051541 | MS.gene25217 | 0.818163 | 2.26E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene25217 | 0.83939 | 1.63E-57 | -1.69E-46 |
| MS.gene051800 | MS.gene25217 | 0.832446 | 9.41E-56 | -1.69E-46 |
| MS.gene051852 | MS.gene25217 | 0.806685 | 7.29E-50 | -1.69E-46 |
| MS.gene052016 | MS.gene25217 | 0.81343 | 2.57E-51 | -1.69E-46 |
| MS.gene052118 | MS.gene25217 | 0.807291 | 5.43E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene25217 | 0.836414 | 9.49E-57 | -1.69E-46 |
| MS.gene052463 | MS.gene25217 | 0.825366 | 4.88E-54 | -1.69E-46 |
| MS.gene052493 | MS.gene25217 | 0.825376 | 4.85E-54 | -1.69E-46 |
| MS.gene052609 | MS.gene25217 | 0.831499 | 1.61E-55 | -1.69E-46 |
| MS.gene052674 | MS.gene25217 | 0.804051 | 2.60E-49 | -1.69E-46 |
| MS.gene052675 | MS.gene25217 | 0.802105 | 6.57E-49 | -1.69E-46 |
| MS.gene052677 | MS.gene25217 | 0.810877 | 9.26E-51 | -1.69E-46 |
| MS.gene052681 | MS.gene25217 | 0.816584 | 5.13E-52 | -1.69E-46 |
| MS.gene053079 | MS.gene25217 | 0.830467 | 2.89E-55 | -1.69E-46 |
| MS.gene053296 | MS.gene25217 | 0.802744 | 4.85E-49 | -1.69E-46 |
| MS.gene05350 | MS.gene25217 | 0.802191 | 6.31E-49 | -1.69E-46 |
| MS.gene05423 | MS.gene25217 | 0.816275 | 6.01E-52 | -1.69E-46 |
| MS.gene05454 | MS.gene25217 | 0.800522 | 1.39E-48 | -1.69E-46 |
| MS.gene054576 | MS.gene25217 | 0.841997 | 3.38E-58 | -1.69E-46 |
| MS.gene054641 | MS.gene25217 | 0.848165 | 7.29E-60 | -1.69E-46 |
| MS.gene054651 | MS.gene25217 | 0.808906 | 2.46E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene25217 | 0.84023 | 9.85E-58 | -1.69E-46 |
| MS.gene054893 | MS.gene25217 | 0.84068 | 7.52E-58 | -1.69E-46 |
| MS.gene055231 | MS.gene25217 | 0.801512 | 8.69E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene25217 | 0.804423 | 2.18E-49 | -1.69E-46 |
| MS.gene055469 | MS.gene25217 | 0.802431 | 5.63E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene25217 | 0.832475 | 9.26E-56 | -1.69E-46 |
| MS.gene055864 | MS.gene25217 | 0.868744 | 5.20E-66 | -1.69E-46 |
| MS.gene056174 | MS.gene25217 | 0.857218 | 1.90E-62 | -1.69E-46 |
| MS.gene056308 | MS.gene25217 | 0.800017 | 1.76E-48 | -1.69E-46 |
| MS.gene056507 | MS.gene25217 | 0.814943 | 1.19E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene25217 | 0.809379 | 1.95E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene25217 | 0.8443 | 8.24E-59 | -1.69E-46 |
| MS.gene05690 | MS.gene25217 | 0.816621 | 5.03E-52 | -1.69E-46 |
| MS.gene057034 | MS.gene25217 | 0.801656 | 8.12E-49 | -1.69E-46 |
| MS.gene057598 | MS.gene25217 | 0.803729 | 3.03E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene25217 | 0.808976 | 2.38E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene25217 | 0.806691 | 7.27E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene25217 | 0.845642 | 3.58E-59 | -1.69E-46 |
| MS.gene058081 | MS.gene25217 | 0.801598 | 8.35E-49 | -1.69E-46 |
| MS.gene058289 | MS.gene25217 | 0.827818 | 1.27E-54 | -1.69E-46 |
| MS.gene058427 | MS.gene25217 | 0.814716 | 1.34E-51 | -1.69E-46 |
| MS.gene058429 | MS.gene25217 | 0.844957 | 5.48E-59 | -1.69E-46 |
| MS.gene058979 | MS.gene25217 | 0.806823 | 6.82E-50 | -1.69E-46 |
| MS.gene05897 | MS.gene25217 | 0.804768 | 1.84E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene25217 | 0.861681 | 8.65E-64 | -1.69E-46 |
| MS.gene059283 | MS.gene25217 | 0.845364 | 4.25E-59 | -1.69E-46 |
| MS.gene059439 | MS.gene25217 | 0.816731 | 4.75E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene25217 | 0.810074 | 1.38E-50 | -1.69E-46 |
| MS.gene059570 | MS.gene25217 | 0.830918 | 2.24E-55 | -1.69E-46 |
| MS.gene059634 | MS.gene25217 | 0.823442 | 1.38E-53 | -1.69E-46 |
| MS.gene059774 | MS.gene25217 | 0.838035 | 3.65E-57 | -1.69E-46 |
| MS.gene060167 | MS.gene25217 | 0.817069 | 3.99E-52 | -1.69E-46 |
| MS.gene060259 | MS.gene25217 | 0.807749 | 4.34E-50 | -1.69E-46 |
| MS.gene060373 | MS.gene25217 | 0.806997 | 6.27E-50 | -1.69E-46 |
| MS.gene060380 | MS.gene25217 | 0.800541 | 1.37E-48 | -1.69E-46 |
| MS.gene060435 | MS.gene25217 | 0.808715 | 2.70E-50 | -1.69E-46 |
| MS.gene060520 | MS.gene25217 | 0.801732 | 7.84E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene25217 | 0.856186 | 3.81E-62 | -1.69E-46 |
| MS.gene060697 | MS.gene25217 | 0.838671 | 2.50E-57 | -1.69E-46 |
| MS.gene060785 | MS.gene25217 | 0.827333 | 1.66E-54 | -1.69E-46 |
| MS.gene060840 | MS.gene25217 | 0.813568 | 2.40E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene25217 | 0.834576 | 2.77E-56 | -1.69E-46 |
| MS.gene060933 | MS.gene25217 | 0.811292 | 7.53E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene25217 | 0.805782 | 1.13E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene25217 | 0.832145 | 1.12E-55 | -1.69E-46 |
| MS.gene06121 | MS.gene25217 | 0.802161 | 6.40E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25217.t1 | MTR_7g106640 | 94.382 | 623 | 35 | 0 | 1 | 623 | 1 | 623 | 0.0 | 1154 |
| MS.gene25217.t1 | MTR_7g106640 | 94.382 | 623 | 35 | 0 | 1 | 623 | 1 | 623 | 0.0 | 1154 |
| MS.gene25217.t1 | MTR_7g106640 | 93.726 | 526 | 33 | 0 | 98 | 623 | 1 | 526 | 0.0 | 961 |
| MS.gene25217.t1 | MTR_7g106640 | 94.079 | 456 | 27 | 0 | 168 | 623 | 1 | 456 | 0.0 | 819 |
| MS.gene25217.t1 | MTR_1g055315 | 61.707 | 410 | 128 | 7 | 1 | 391 | 1 | 400 | 3.64e-164 | 483 |
| MS.gene25217.t1 | MTR_1g055315 | 38.017 | 121 | 67 | 3 | 506 | 625 | 371 | 484 | 4.42e-13 | 72.8 |
| MS.gene25217.t1 | MTR_1g055315 | 60.641 | 343 | 109 | 5 | 67 | 391 | 1 | 335 | 3.05e-137 | 411 |
| MS.gene25217.t1 | MTR_1g055315 | 38.017 | 121 | 67 | 3 | 506 | 625 | 306 | 419 | 3.70e-13 | 72.8 |
| MS.gene25217.t1 | MTR_2g066850 | 70.614 | 228 | 44 | 4 | 123 | 349 | 732 | 937 | 1.57e-88 | 298 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25217.t1 | AT5G06440 | 53.165 | 316 | 135 | 3 | 1 | 315 | 1 | 304 | 6.32e-116 | 355 |
| MS.gene25217.t1 | AT5G06440 | 53.165 | 316 | 135 | 3 | 1 | 315 | 1 | 304 | 6.32e-116 | 355 |
| MS.gene25217.t1 | AT5G06440 | 51.852 | 324 | 134 | 5 | 1 | 315 | 1 | 311 | 1.18e-111 | 344 |
| MS.gene25217.t1 | AT5G06440 | 53.310 | 287 | 119 | 4 | 1 | 285 | 1 | 274 | 3.76e-103 | 315 |
| MS.gene25217.t1 | AT5G06440 | 59.565 | 230 | 88 | 2 | 87 | 315 | 5 | 230 | 1.40e-98 | 307 |
| MS.gene25217.t1 | AT5G06440 | 59.817 | 219 | 83 | 2 | 98 | 315 | 1 | 215 | 1.03e-94 | 296 |
| MS.gene25217.t1 | AT3G11720 | 44.411 | 331 | 152 | 6 | 1 | 326 | 1 | 304 | 6.16e-94 | 300 |
| MS.gene25217.t1 | AT3G11720 | 44.411 | 331 | 152 | 6 | 1 | 326 | 1 | 304 | 6.16e-94 | 300 |
| MS.gene25217.t1 | AT3G11720 | 44.411 | 331 | 152 | 6 | 1 | 326 | 55 | 358 | 6.88e-93 | 298 |
| MS.gene25217.t1 | AT3G11720 | 49.130 | 230 | 97 | 4 | 98 | 326 | 1 | 211 | 3.70e-74 | 245 |
Find 103 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGTAATTATTTGCATTT+TGG | 0.186628 | 7.3:+7438919 | None:intergenic |
| ATCTTCAATATTTGCTTCTA+TGG | 0.193108 | 7.3:+7438458 | None:intergenic |
| ATTCTCACCATTTCTTATAA+AGG | 0.226461 | 7.3:+7440427 | None:intergenic |
| CGACAATCTCACAATTCTTT+TGG | 0.239123 | 7.3:+7438499 | None:intergenic |
| TTGTAGGGCAATAGGGAATT+TGG | 0.245211 | 7.3:-7439341 | MS.gene25217:intron |
| TTCATTTCAAGGCAACTTAT+TGG | 0.246795 | 7.3:-7439280 | MS.gene25217:CDS |
| GCCTTGAAATGAAATTTATA+AGG | 0.259631 | 7.3:+7439290 | None:intergenic |
| TTCAATAAGCAATGTATTAT+AGG | 0.275063 | 7.3:+7440621 | None:intergenic |
| CTCACAACACCCTTTGCTTC+AGG | 0.277935 | 7.3:+7439689 | None:intergenic |
| TATGTTGCTGCTTGGTCCTT+TGG | 0.311330 | 7.3:+7438146 | None:intergenic |
| TTCTCACCATTTCTTATAAA+GGG | 0.318688 | 7.3:+7440428 | None:intergenic |
| CATCTGAAAGAAGTTATTTC+CGG | 0.324574 | 7.3:-7439628 | MS.gene25217:intron |
| GATGTATTGCTTTCCTCAAA+TGG | 0.327557 | 7.3:+7438681 | None:intergenic |
| GTGCTATTTGTTCTCCAGTC+TGG | 0.329723 | 7.3:+7440101 | None:intergenic |
| CCCTTATAAATTTCATTTCA+AGG | 0.335848 | 7.3:-7439291 | MS.gene25217:CDS |
| GAGAACAAATAGCACTAATA+AGG | 0.341307 | 7.3:-7440093 | MS.gene25217:intron |
| CTTATTGAAGGCTATGTAGA+TGG | 0.348985 | 7.3:-7440607 | MS.gene25217:CDS |
| GAGATCGCAGAAGCAGATAT+TGG | 0.371598 | 7.3:-7438606 | MS.gene25217:CDS |
| AAAATTAATGAGACTATTGA+TGG | 0.372387 | 7.3:-7439731 | MS.gene25217:CDS |
| AATCATCCCTTTATAAGAAA+TGG | 0.382734 | 7.3:-7440434 | MS.gene25217:intron |
| TCAATAAGCAATGTATTATA+GGG | 0.386854 | 7.3:+7440622 | None:intergenic |
| TATAATACATTGCTTATTGA+AGG | 0.397643 | 7.3:-7440619 | MS.gene25217:CDS |
| TTCACAATCAGAGATGGAAT+TGG | 0.399834 | 7.3:-7441114 | MS.gene25217:CDS |
| TATCAGCTCAAATGTAAAAC+AGG | 0.404649 | 7.3:-7438340 | MS.gene25217:CDS |
| ATTTCATCAGTTCAGAAATA+CGG | 0.409322 | 7.3:-7438294 | MS.gene25217:CDS |
| CCTTGAAATGAAATTTATAA+GGG | 0.411284 | 7.3:+7439291 | None:intergenic |
| TTAGTCAAAGTAAGCAAGAT+TGG | 0.417597 | 7.3:-7438974 | MS.gene25217:CDS |
| CTTCTTTCGACAGTTAAAAC+AGG | 0.422510 | 7.3:-7440692 | MS.gene25217:intron |
| ATTGAATATGATAATATAAG+AGG | 0.428070 | 7.3:-7438390 | MS.gene25217:CDS |
| TTAGCACATCAAGGACTGAT+TGG | 0.429890 | 7.3:-7440915 | MS.gene25217:CDS |
| CTCCATGGCCACTGTCTACA+AGG | 0.436068 | 7.3:-7439954 | MS.gene25217:CDS |
| TGATACATCTATTGTGCTAA+AGG | 0.436279 | 7.3:-7438523 | MS.gene25217:CDS |
| GGGAGGTTATGTTATACAAA+AGG | 0.451155 | 7.3:-7439654 | MS.gene25217:CDS |
| ATGAACGGCGACAAAGAATT+CGG | 0.464485 | 7.3:-7439119 | MS.gene25217:CDS |
| TCCCGTAGTATGTTGCTGCT+TGG | 0.470591 | 7.3:+7438138 | None:intergenic |
| TGTGACTGACCAACATCAAC+AGG | 0.471454 | 7.3:+7440583 | None:intergenic |
| GTTGTGAGAATTGATTTGTT+GGG | 0.475038 | 7.3:-7439674 | MS.gene25217:CDS |
| AGTACACGACATTCCATTTG+AGG | 0.475441 | 7.3:-7438694 | MS.gene25217:CDS |
| TGTGCAATATAGGGAGAGGT+TGG | 0.477595 | 7.3:-7441213 | MS.gene25217:CDS |
| AGGCTTTAGAAACATTAGAA+AGG | 0.478529 | 7.3:-7438320 | MS.gene25217:CDS |
| GATACATCTATTGTGCTAAA+GGG | 0.484119 | 7.3:-7438522 | MS.gene25217:CDS |
| GATACATAAAGATGGACAAA+AGG | 0.484559 | 7.3:-7441244 | None:intergenic |
| ATCCATAGCATTTGATTCAT+CGG | 0.487059 | 7.3:+7439043 | None:intergenic |
| GGCTTTAGAAACATTAGAAA+GGG | 0.487114 | 7.3:-7438319 | MS.gene25217:CDS |
| AGATATTGTACAAATTGAAA+AGG | 0.488307 | 7.3:-7438439 | MS.gene25217:CDS |
| GTATTATAGGGAGTTCCCTC+TGG | 0.491261 | 7.3:+7440634 | None:intergenic |
| TGACAGCTTTATGCGTCTCA+TGG | 0.495714 | 7.3:-7440458 | MS.gene25217:intron |
| CTTTGACTAAGCTCTTCAGC+AGG | 0.503153 | 7.3:+7438987 | None:intergenic |
| TGTTGTGAGAATTGATTTGT+TGG | 0.503261 | 7.3:-7439675 | MS.gene25217:CDS |
| TAGTCAAAGTAAGCAAGATT+GGG | 0.503463 | 7.3:-7438973 | MS.gene25217:CDS |
| GACCAAGCAGCAACATACTA+CGG | 0.504286 | 7.3:-7438140 | MS.gene25217:CDS |
| TCAAGGCAACTTATTGGCAG+TGG | 0.505086 | 7.3:-7439274 | MS.gene25217:CDS |
| TGTTTGCAGAAGGTCCAGAC+TGG | 0.509433 | 7.3:-7440115 | MS.gene25217:CDS |
| AAGTAAATGACATTTCAGTC+GGG | 0.509863 | 7.3:-7438551 | MS.gene25217:CDS |
| GATGCAGTAACTTTGAAAGT+AGG | 0.512463 | 7.3:+7440142 | None:intergenic |
| TGCATCTGATTGTTTGCAGA+AGG | 0.516483 | 7.3:-7440125 | MS.gene25217:CDS |
| TACCGATGAATCAAATGCTA+TGG | 0.518027 | 7.3:-7439045 | MS.gene25217:CDS |
| AAAGTAAATGACATTTCAGT+CGG | 0.519463 | 7.3:-7438552 | MS.gene25217:CDS |
| ATGAAATTTATAAGGGATGG+AGG | 0.526404 | 7.3:+7439298 | None:intergenic |
| AGGGAATTTGGATATCAAGC+TGG | 0.527263 | 7.3:-7439329 | MS.gene25217:CDS |
| TCTCTGATTGTGAAGAATGA+TGG | 0.539462 | 7.3:+7441123 | None:intergenic |
| GAAATGAAATTTATAAGGGA+TGG | 0.541927 | 7.3:+7439295 | None:intergenic |
| AAAAGATGTATCACCTTCCT+CGG | 0.546283 | 7.3:+7438821 | None:intergenic |
| GACAGCTTTATGCGTCTCAT+GGG | 0.548438 | 7.3:-7440457 | MS.gene25217:intron |
| AGAGATTGTACAAATTGAGA+AGG | 0.555855 | 7.3:-7438727 | MS.gene25217:CDS |
| AGTGCTTCTGCAGATGAAAG+TGG | 0.566002 | 7.3:-7440943 | MS.gene25217:CDS |
| CATGACATTTCAACCGAGGA+AGG | 0.569041 | 7.3:-7438834 | MS.gene25217:CDS |
| AGAGATTGTACAAAGTGAGA+AGG | 0.571592 | 7.3:-7438871 | MS.gene25217:CDS |
| TCCCTTGTAGACAGTGGCCA+TGG | 0.571642 | 7.3:+7439952 | None:intergenic |
| ATAATTTGTAAGATCAAATG+AGG | 0.571787 | 7.3:+7441178 | None:intergenic |
| TCATTCTTCACAATCAGAGA+TGG | 0.573861 | 7.3:-7441120 | MS.gene25217:CDS |
| AAGAAAGGATGAAGCCTCCA+TGG | 0.577075 | 7.3:-7439969 | MS.gene25217:intron |
| ACCAAGCAGCAACATACTAC+GGG | 0.580272 | 7.3:-7438139 | MS.gene25217:CDS |
| TTCGGTTCATTCAGGCACAC+AGG | 0.582875 | 7.3:-7437818 | MS.gene25217:intron |
| TGAATCAAATGCTATGGATG+AGG | 0.587498 | 7.3:-7439039 | MS.gene25217:CDS |
| AGGAGCAGATCTTAGCATGA+AGG | 0.589267 | 7.3:-7437798 | None:intergenic |
| TGGTTTCAGACTTTATCAGA+AGG | 0.594007 | 7.3:-7439254 | MS.gene25217:intron |
| GAAAATGATGTCAGTGCCAA+AGG | 0.594639 | 7.3:-7438162 | MS.gene25217:CDS |
| GTGGAGGATTTAGCACATCA+AGG | 0.603076 | 7.3:-7440924 | MS.gene25217:CDS |
| GTGAGAATTGATTTGTTGGG+AGG | 0.607741 | 7.3:-7439671 | MS.gene25217:CDS |
| ATATTGTGCAATATAGGGAG+AGG | 0.608785 | 7.3:-7441217 | MS.gene25217:CDS |
| CTTGTAGACAGTGGCCATGG+AGG | 0.613608 | 7.3:+7439955 | None:intergenic |
| TGATGTGATTCCTGAAGCAA+AGG | 0.614045 | 7.3:-7439699 | MS.gene25217:CDS |
| AACATACAACAAGTCAGTCA+AGG | 0.623049 | 7.3:+7439091 | None:intergenic |
| GCTGTAGCTTCTAAGATGAA+CGG | 0.631947 | 7.3:-7439134 | MS.gene25217:CDS |
| AGTAAATGACATTTCAGTCG+GGG | 0.634575 | 7.3:-7438550 | MS.gene25217:CDS |
| CAATCAGAGATGGAATTGGA+AGG | 0.638150 | 7.3:-7441110 | MS.gene25217:intron |
| GTAGATGGACCTGTTGATGT+TGG | 0.638645 | 7.3:-7440592 | MS.gene25217:intron |
| TTCCGCGTTATGTATCGTGA+AGG | 0.644276 | 7.3:-7440658 | MS.gene25217:CDS |
| CAAAATGCAAATAATTACAA+TGG | 0.645911 | 7.3:-7438918 | MS.gene25217:CDS |
| TCCATGGCCACTGTCTACAA+GGG | 0.652310 | 7.3:-7439953 | MS.gene25217:CDS |
| AATACGGATTTCGTTCACGC+AGG | 0.658313 | 7.3:-7438278 | MS.gene25217:CDS |
| ATGGCCACTGTCTACAAGGG+AGG | 0.663692 | 7.3:-7439950 | MS.gene25217:CDS |
| ATGTATCGTGAAGGACCAGA+GGG | 0.667773 | 7.3:-7440649 | MS.gene25217:CDS |
| TATGTATCGTGAAGGACCAG+AGG | 0.674519 | 7.3:-7440650 | MS.gene25217:CDS |
| CGGCGACAAAGAATTCGGCA+AGG | 0.680174 | 7.3:-7439114 | MS.gene25217:CDS |
| GATGTGATTCCTGAAGCAAA+GGG | 0.685960 | 7.3:-7439698 | MS.gene25217:CDS |
| ACAGCCTCCCTTGTAGACAG+TGG | 0.690378 | 7.3:+7439946 | None:intergenic |
| GCTTCTGCAGATGAAAGTGG+AGG | 0.692008 | 7.3:-7440940 | MS.gene25217:CDS |
| AAAGTAGGAACAGTAAACTG+TGG | 0.716270 | 7.3:+7440157 | None:intergenic |
| AGTGCATGACATTTCAACCG+AGG | 0.717008 | 7.3:-7438838 | MS.gene25217:CDS |
| ACAGTTAAAACAGGATAACG+AGG | 0.723822 | 7.3:-7440683 | MS.gene25217:intron |
| GTCCTTCACGATACATAACG+CGG | 0.774533 | 7.3:+7440656 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATATCAAAATATATAATA+TGG | + | chr7.3:7438530-7438549 | None:intergenic | 10.0% |
| !! | AGAACAATTAATGAAAATTA+TGG | - | chr7.3:7438752-7438771 | MS.gene25217:CDS | 15.0% |
| !! | ATTGAATATGATAATATAAG+AGG | - | chr7.3:7440644-7440663 | MS.gene25217:CDS | 15.0% |
| !! | GAATAATTACAAAAATTACT+TGG | - | chr7.3:7441069-7441088 | MS.gene25217:intron | 15.0% |
| !! | GATAAAAATAAAACAAAACT+TGG | + | chr7.3:7438174-7438193 | None:intergenic | 15.0% |
| !! | TGAAACAAAATATTACTTAT+TGG | + | chr7.3:7439620-7439639 | None:intergenic | 15.0% |
| !!! | ATAAGTAATATTTTGTTTCA+TGG | - | chr7.3:7439620-7439639 | MS.gene25217:intron | 15.0% |
| !!! | ATTTTATATCATTTGTTGAT+TGG | - | chr7.3:7439476-7439495 | MS.gene25217:intron | 15.0% |
| !!! | ATTTTTCAATTAAATTCTCA+AGG | - | chr7.3:7438302-7438321 | MS.gene25217:CDS | 15.0% |
| !!! | ATTTTTTGTCAAATTTTGTA+GGG | - | chr7.3:7439678-7439697 | MS.gene25217:CDS | 15.0% |
| !!! | TATTTTTTGTCAAATTTTGT+AGG | - | chr7.3:7439677-7439696 | MS.gene25217:CDS | 15.0% |
| !! | AAAATTAATGAGACTATTGA+TGG | - | chr7.3:7439303-7439322 | MS.gene25217:CDS | 20.0% |
| !! | AGAAATGAAAATTGTGATAA+AGG | + | chr7.3:7438850-7438869 | None:intergenic | 20.0% |
| !! | AGATATTGTACAAATTGAAA+AGG | - | chr7.3:7440595-7440614 | MS.gene25217:CDS | 20.0% |
| !! | CAAAATGCAAATAATTACAA+TGG | - | chr7.3:7440116-7440135 | MS.gene25217:CDS | 20.0% |
| !! | CCTTGAAATGAAATTTATAA+GGG | + | chr7.3:7439746-7439765 | None:intergenic | 20.0% |
| !! | GAAAAATATTGTGCAATATA+GGG | - | chr7.3:7437812-7437831 | MS.gene25217:intron | 20.0% |
| !! | TATAATACATTGCTTATTGA+AGG | - | chr7.3:7438415-7438434 | MS.gene25217:CDS | 20.0% |
| !! | TATGATTGTTTGGAAATATT+AGG | - | chr7.3:7441140-7441159 | MS.gene25217:CDS | 20.0% |
| !! | TATTGTTACATATGATTGTT+TGG | - | chr7.3:7441130-7441149 | MS.gene25217:CDS | 20.0% |
| !! | TCAATAAGCAATGTATTATA+GGG | + | chr7.3:7438415-7438434 | None:intergenic | 20.0% |
| !! | TTAGAAATTTCTCTTTCATT+GGG | - | chr7.3:7439522-7439541 | MS.gene25217:intron | 20.0% |
| !! | TTCAATAAGCAATGTATTAT+AGG | + | chr7.3:7438416-7438435 | None:intergenic | 20.0% |
| !! | TTCGTTGTTAAACTTAAAAA+GGG | + | chr7.3:7438505-7438524 | None:intergenic | 20.0% |
| !!! | AATACATCTTTTGTACTAAA+AGG | - | chr7.3:7440368-7440387 | MS.gene25217:intron | 20.0% |
| !!! | ATAATTTGTAAGATCAAATG+AGG | + | chr7.3:7437859-7437878 | None:intergenic | 20.0% |
| !!! | CATTGTAATTATTTGCATTT+TGG | + | chr7.3:7440118-7440137 | None:intergenic | 20.0% |
| !!! | TTTATGCTTAATTTTATCTC+AGG | - | chr7.3:7439266-7439285 | MS.gene25217:CDS | 20.0% |
| ! | AAAGTAAATGACATTTCAGT+CGG | - | chr7.3:7440482-7440501 | MS.gene25217:intron | 25.0% |
| ! | AATCATCCCTTTATAAGAAA+TGG | - | chr7.3:7438600-7438619 | MS.gene25217:CDS | 25.0% |
| ! | ACTCATGAATATCTATGTAA+GGG | - | chr7.3:7438721-7438740 | MS.gene25217:CDS | 25.0% |
| ! | ATCTTCAATATTTGCTTCTA+TGG | + | chr7.3:7440579-7440598 | None:intergenic | 25.0% |
| ! | ATTCTCACCATTTCTTATAA+AGG | + | chr7.3:7438610-7438629 | None:intergenic | 25.0% |
| ! | ATTTCATCAGTTCAGAAATA+CGG | - | chr7.3:7440740-7440759 | MS.gene25217:intron | 25.0% |
| ! | CCCTTATAAATTTCATTTCA+AGG | - | chr7.3:7439743-7439762 | MS.gene25217:CDS | 25.0% |
| ! | CTTCGTTGTTAAACTTAAAA+AGG | + | chr7.3:7438506-7438525 | None:intergenic | 25.0% |
| ! | GAAATGAAATTTATAAGGGA+TGG | + | chr7.3:7439742-7439761 | None:intergenic | 25.0% |
| ! | GCCTTGAAATGAAATTTATA+AGG | + | chr7.3:7439747-7439766 | None:intergenic | 25.0% |
| ! | GGAAAAATATTGTGCAATAT+AGG | - | chr7.3:7437811-7437830 | MS.gene25217:intron | 25.0% |
| ! | GTATGCTTAATAATATCAGT+TGG | + | chr7.3:7438788-7438807 | None:intergenic | 25.0% |
| ! | GTTAGAAATTTCTCTTTCAT+TGG | - | chr7.3:7439521-7439540 | MS.gene25217:intron | 25.0% |
| ! | TCATCCTTTCTTACAAAATA+TGG | + | chr7.3:7439057-7439076 | None:intergenic | 25.0% |
| ! | TTCTCACCATTTCTTATAAA+GGG | + | chr7.3:7438609-7438628 | None:intergenic | 25.0% |
| !! | ATTGATAACTTCATTTCAGA+AGG | - | chr7.3:7438196-7438215 | MS.gene25217:CDS | 25.0% |
| !! | TATCACAATTTTCATTTCTC+AGG | - | chr7.3:7438851-7438870 | MS.gene25217:CDS | 25.0% |
| !! | TCTGAAATGAAGTTATCAAT+TGG | + | chr7.3:7438196-7438215 | None:intergenic | 25.0% |
| !! | TGTTCCATATTTTGTAAGAA+AGG | - | chr7.3:7439050-7439069 | MS.gene25217:CDS | 25.0% |
| !! | TTGATAACTTCATTTCAGAA+GGG | - | chr7.3:7438197-7438216 | MS.gene25217:CDS | 25.0% |
| !!! | GATAGTAGTTCTTTTGAAAA+CGG | - | chr7.3:7439150-7439169 | MS.gene25217:intron | 25.0% |
| !!! | TCTAAGCACTGATTATAAAT+GGG | + | chr7.3:7441005-7441024 | None:intergenic | 25.0% |
| !!! | TCTATTTCTTTTTTTGTTGC+AGG | - | chr7.3:7438007-7438026 | MS.gene25217:intron | 25.0% |
| !!! | TTGACACTTTTATTTCCTTT+CGG | - | chr7.3:7441198-7441217 | MS.gene25217:CDS | 25.0% |
| AAGTAAATGACATTTCAGTC+GGG | - | chr7.3:7440483-7440502 | MS.gene25217:intron | 30.0% | |
| ACTCACTTAAAAAAACTCAC+CGG | + | chr7.3:7439428-7439447 | None:intergenic | 30.0% | |
| AGAAACAGAAAAAAAGATCG+AGG | + | chr7.3:7439182-7439201 | None:intergenic | 30.0% | |
| AGAGATTGTACAAATTGAGA+AGG | - | chr7.3:7440307-7440326 | MS.gene25217:intron | 30.0% | |
| AGATAAACTCATGATACTAG+TGG | + | chr7.3:7437990-7438009 | None:intergenic | 30.0% | |
| ATACAAGCATTCAAAAGTGA+AGG | + | chr7.3:7439030-7439049 | None:intergenic | 30.0% | |
| ATCCATAGCATTTGATTCAT+CGG | + | chr7.3:7439994-7440013 | None:intergenic | 30.0% | |
| ATGAAATTTATAAGGGATGG+AGG | + | chr7.3:7439739-7439758 | None:intergenic | 30.0% | |
| ATTGGGTGAAAAATATGTCT+CGG | - | chr7.3:7440078-7440097 | MS.gene25217:intron | 30.0% | |
| ATTGTTACACAAGATTGCAT+TGG | + | chr7.3:7438239-7438258 | None:intergenic | 30.0% | |
| CACTCATGAATATCTATGTA+AGG | - | chr7.3:7438720-7438739 | MS.gene25217:CDS | 30.0% | |
| GAGAACAAATAGCACTAATA+AGG | - | chr7.3:7438941-7438960 | MS.gene25217:CDS | 30.0% | |
| GATACATCTATTGTGCTAAA+GGG | - | chr7.3:7440512-7440531 | MS.gene25217:intron | 30.0% | |
| TACAATGTGAGATTCTTGAA+TGG | - | chr7.3:7441036-7441055 | MS.gene25217:intron | 30.0% | |
| TAGTCAAAGTAAGCAAGATT+GGG | - | chr7.3:7440061-7440080 | MS.gene25217:intron | 30.0% | |
| TATCAGCTCAAATGTAAAAC+AGG | - | chr7.3:7440694-7440713 | MS.gene25217:intron | 30.0% | |
| TGATAACTTCATTTCAGAAG+GGG | - | chr7.3:7438198-7438217 | MS.gene25217:CDS | 30.0% | |
| TGATACATCTATTGTGCTAA+AGG | - | chr7.3:7440511-7440530 | MS.gene25217:intron | 30.0% | |
| TTAGTCAAAGTAAGCAAGAT+TGG | - | chr7.3:7440060-7440079 | MS.gene25217:intron | 30.0% | |
| TTCATTTCAAGGCAACTTAT+TGG | - | chr7.3:7439754-7439773 | MS.gene25217:intron | 30.0% | |
| ! | AATGGTCAGATTTTAGATAC+AGG | - | chr7.3:7440134-7440153 | MS.gene25217:CDS | 30.0% |
| ! | CATCTGAAAGAAGTTATTTC+CGG | - | chr7.3:7439406-7439425 | MS.gene25217:intron | 30.0% |
| ! | CCTTGGTTATTTAACTTCTT+CGG | - | chr7.3:7439551-7439570 | MS.gene25217:intron | 30.0% |
| ! | GATACATCTTTTGTACTACA+TGG | - | chr7.3:7440224-7440243 | MS.gene25217:intron | 30.0% |
| ! | TAATAATATCAGTTGGTGTC+TGG | + | chr7.3:7438781-7438800 | None:intergenic | 30.0% |
| ! | TATATGATTTGAGCTTGTTC+TGG | - | chr7.3:7437949-7437968 | MS.gene25217:intron | 30.0% |
| ! | TCAAATTTTGTAGGGCAATA+GGG | - | chr7.3:7439686-7439705 | MS.gene25217:CDS | 30.0% |
| ! | TGAACAAGTTTTGCAGAATA+CGG | + | chr7.3:7440842-7440861 | None:intergenic | 30.0% |
| !! | AAAAGTGAAGGCGTTTAATA+TGG | + | chr7.3:7439018-7439037 | None:intergenic | 30.0% |
| !! | AGGCTTTAGAAACATTAGAA+AGG | - | chr7.3:7440714-7440733 | MS.gene25217:intron | 30.0% |
| !! | GGCTTTAGAAACATTAGAAA+GGG | - | chr7.3:7440715-7440734 | MS.gene25217:intron | 30.0% |
| !! | GTCTAAGCACTGATTATAAA+TGG | + | chr7.3:7441006-7441025 | None:intergenic | 30.0% |
| !! | GTTGTGAGAATTGATTTGTT+GGG | - | chr7.3:7439360-7439379 | MS.gene25217:intron | 30.0% |
| !! | TGTTGTGAGAATTGATTTGT+TGG | - | chr7.3:7439359-7439378 | MS.gene25217:intron | 30.0% |
| !!! | TTTTTTTGTTGCAGGATATG+AGG | - | chr7.3:7438015-7438034 | MS.gene25217:intron | 30.0% |
| AAAAGATGTATCACCTTCCT+CGG | + | chr7.3:7440216-7440235 | None:intergenic | 35.0% | |
| AAAGTAGGAACAGTAAACTG+TGG | + | chr7.3:7438880-7438899 | None:intergenic | 35.0% | |
| AACATACAACAAGTCAGTCA+AGG | + | chr7.3:7439946-7439965 | None:intergenic | 35.0% | |
| AACATTAGTAGTAGCTTGGA+AGG | - | chr7.3:7439453-7439472 | MS.gene25217:intron | 35.0% | |
| ACAGTTAAAACAGGATAACG+AGG | - | chr7.3:7438351-7438370 | MS.gene25217:CDS | 35.0% | |
| AGAGATTGTACAAAGTGAGA+AGG | - | chr7.3:7440163-7440182 | MS.gene25217:CDS | 35.0% | |
| AGTAAATGACATTTCAGTCG+GGG | - | chr7.3:7440484-7440503 | MS.gene25217:intron | 35.0% | |
| ATATTGTGCAATATAGGGAG+AGG | - | chr7.3:7437817-7437836 | MS.gene25217:intron | 35.0% | |
| ATCTCGAAATCCAAAACTTC+AGG | - | chr7.3:7440930-7440949 | MS.gene25217:CDS | 35.0% | |
| ATGGCGAGTGAGATTAAAAT+GGG | + | chr7.3:7438999-7439018 | None:intergenic | 35.0% | |
| CAGAAGGGGAAAAAATTCAA+TGG | - | chr7.3:7438212-7438231 | MS.gene25217:CDS | 35.0% | |
| CATGAATATCTATGTAAGGG+TGG | - | chr7.3:7438724-7438743 | MS.gene25217:CDS | 35.0% | |
| CCGAAGAAGTTAAATAACCA+AGG | + | chr7.3:7439554-7439573 | None:intergenic | 35.0% | |
| CTCAAACATTAGTAGTAGCT+TGG | - | chr7.3:7439449-7439468 | MS.gene25217:intron | 35.0% | |
| CTTATTGAAGGCTATGTAGA+TGG | - | chr7.3:7438427-7438446 | MS.gene25217:CDS | 35.0% | |
| CTTCTTTCGACAGTTAAAAC+AGG | - | chr7.3:7438342-7438361 | MS.gene25217:CDS | 35.0% | |
| GATGTATTGCTTTCCTCAAA+TGG | + | chr7.3:7440356-7440375 | None:intergenic | 35.0% | |
| GGGAGGTTATGTTATACAAA+AGG | - | chr7.3:7439380-7439399 | MS.gene25217:intron | 35.0% | |
| TACCGATGAATCAAATGCTA+TGG | - | chr7.3:7439989-7440008 | MS.gene25217:intron | 35.0% | |
| TATGGCGAGTGAGATTAAAA+TGG | + | chr7.3:7439000-7439019 | None:intergenic | 35.0% | |
| TATTTCCTTTCGGTTCATTC+AGG | - | chr7.3:7441208-7441227 | MS.gene25217:CDS | 35.0% | |
| TCATTCTTCACAATCAGAGA+TGG | - | chr7.3:7437914-7437933 | MS.gene25217:intron | 35.0% | |
| TCTCTGATTGTGAAGAATGA+TGG | + | chr7.3:7437914-7437933 | None:intergenic | 35.0% | |
| TGAATCAAATGCTATGGATG+AGG | - | chr7.3:7439995-7440014 | MS.gene25217:intron | 35.0% | |
| TGGTTTCAGACTTTATCAGA+AGG | - | chr7.3:7439780-7439799 | MS.gene25217:intron | 35.0% | |
| TTCACAATCAGAGATGGAAT+TGG | - | chr7.3:7437920-7437939 | MS.gene25217:intron | 35.0% | |
| TTGGGTGAAAAATATGTCTC+GGG | - | chr7.3:7440079-7440098 | MS.gene25217:intron | 35.0% | |
| ! | CACAATTTTCATTTCTCAGG+TGG | - | chr7.3:7438854-7438873 | MS.gene25217:CDS | 35.0% |
| ! | CGACAATCTCACAATTCTTT+TGG | + | chr7.3:7440538-7440557 | None:intergenic | 35.0% |
| ! | CTGACATCATTTTCAACAGA+TGG | + | chr7.3:7440866-7440885 | None:intergenic | 35.0% |
| ! | GATGCAGTAACTTTGAAAGT+AGG | + | chr7.3:7438895-7438914 | None:intergenic | 35.0% |
| ! | GTCAAATTTTGTAGGGCAAT+AGG | - | chr7.3:7439685-7439704 | MS.gene25217:CDS | 35.0% |
| ! | GTTAGACTTACCTGAAGTTT+TGG | + | chr7.3:7440943-7440962 | None:intergenic | 35.0% |
| ACAGCCTATAACAACACCAA+GGG | + | chr7.3:7439885-7439904 | None:intergenic | 40.0% | |
| AGGGAATTTGGATATCAAGC+TGG | - | chr7.3:7439705-7439724 | MS.gene25217:CDS | 40.0% | |
| AGTACACGACATTCCATTTG+AGG | - | chr7.3:7440340-7440359 | MS.gene25217:intron | 40.0% | |
| ATGAACGGCGACAAAGAATT+CGG | - | chr7.3:7439915-7439934 | MS.gene25217:CDS | 40.0% | |
| CAAAACTGCTTTGTAAGGTG+AGG | - | chr7.3:7440972-7440991 | MS.gene25217:CDS | 40.0% | |
| CAATCAGAGATGGAATTGGA+AGG | - | chr7.3:7437924-7437943 | MS.gene25217:intron | 40.0% | |
| CCTCACAAAACTGCTTTGTA+AGG | - | chr7.3:7440967-7440986 | MS.gene25217:CDS | 40.0% | |
| CTTTCATTGGGTTTGAACCT+TGG | - | chr7.3:7439534-7439553 | MS.gene25217:intron | 40.0% | |
| GAAAATGATGTCAGTGCCAA+AGG | - | chr7.3:7440872-7440891 | MS.gene25217:intron | 40.0% | |
| GATGTGATTCCTGAAGCAAA+GGG | - | chr7.3:7439336-7439355 | MS.gene25217:CDS | 40.0% | |
| TACAGCCTATAACAACACCA+AGG | + | chr7.3:7439886-7439905 | None:intergenic | 40.0% | |
| TCAAGGACTGATTGGAAAGT+AGG | - | chr7.3:7438127-7438146 | MS.gene25217:intron | 40.0% | |
| TGATGTGATTCCTGAAGCAA+AGG | - | chr7.3:7439335-7439354 | MS.gene25217:CDS | 40.0% | |
| TGCATCTGATTGTTTGCAGA+AGG | - | chr7.3:7438909-7438928 | MS.gene25217:CDS | 40.0% | |
| TTAGCACATCAAGGACTGAT+TGG | - | chr7.3:7438119-7438138 | MS.gene25217:intron | 40.0% | |
| TTGTAGGGCAATAGGGAATT+TGG | - | chr7.3:7439693-7439712 | MS.gene25217:CDS | 40.0% | |
| ! | CTTTTGTACTACATGGCAGT+AGG | - | chr7.3:7440231-7440250 | MS.gene25217:intron | 40.0% |
| !! | CCTTACAAAGCAGTTTTGTG+AGG | + | chr7.3:7440970-7440989 | None:intergenic | 40.0% |
| !! | GCTGTAGCTTCTAAGATGAA+CGG | - | chr7.3:7439900-7439919 | MS.gene25217:CDS | 40.0% |
| !! | GTGAGAATTGATTTGTTGGG+AGG | - | chr7.3:7439363-7439382 | MS.gene25217:intron | 40.0% |
| !! | TACAAAGCAGTTTTGTGAGG+TGG | + | chr7.3:7440967-7440986 | None:intergenic | 40.0% |
| AAGAAAGGATGAAGCCTCCA+TGG | - | chr7.3:7439065-7439084 | MS.gene25217:CDS | 45.0% | |
| AATACGGATTTCGTTCACGC+AGG | - | chr7.3:7440756-7440775 | MS.gene25217:intron | 45.0% | |
| ACCAAGCAGCAACATACTAC+GGG | - | chr7.3:7440895-7440914 | MS.gene25217:intron | 45.0% | |
| AGTGCATGACATTTCAACCG+AGG | - | chr7.3:7440196-7440215 | MS.gene25217:intron | 45.0% | |
| AGTGCTTCTGCAGATGAAAG+TGG | - | chr7.3:7438091-7438110 | MS.gene25217:intron | 45.0% | |
| ATGTATCGTGAAGGACCAGA+GGG | - | chr7.3:7438385-7438404 | MS.gene25217:CDS | 45.0% | |
| CATGACATTTCAACCGAGGA+AGG | - | chr7.3:7440200-7440219 | MS.gene25217:intron | 45.0% | |
| CTTTGACTAAGCTCTTCAGC+AGG | + | chr7.3:7440050-7440069 | None:intergenic | 45.0% | |
| GACCAAGCAGCAACATACTA+CGG | - | chr7.3:7440894-7440913 | MS.gene25217:intron | 45.0% | |
| GAGATCGCAGAAGCAGATAT+TGG | - | chr7.3:7440428-7440447 | MS.gene25217:intron | 45.0% | |
| GGTGAAAAATATGTCTCGGG+AGG | - | chr7.3:7440082-7440101 | MS.gene25217:intron | 45.0% | |
| GTAGATGGACCTGTTGATGT+TGG | - | chr7.3:7438442-7438461 | MS.gene25217:CDS | 45.0% | |
| GTATTATAGGGAGTTCCCTC+TGG | + | chr7.3:7438403-7438422 | None:intergenic | 45.0% | |
| GTCCTTCACGATACATAACG+CGG | + | chr7.3:7438381-7438400 | None:intergenic | 45.0% | |
| GTGGAGGATTTAGCACATCA+AGG | - | chr7.3:7438110-7438129 | MS.gene25217:intron | 45.0% | |
| TATGTATCGTGAAGGACCAG+AGG | - | chr7.3:7438384-7438403 | MS.gene25217:CDS | 45.0% | |
| TCAAGGCAACTTATTGGCAG+TGG | - | chr7.3:7439760-7439779 | MS.gene25217:intron | 45.0% | |
| TGTGACTGACCAACATCAAC+AGG | + | chr7.3:7438454-7438473 | None:intergenic | 45.0% | |
| TGTGCAATATAGGGAGAGGT+TGG | - | chr7.3:7437821-7437840 | MS.gene25217:intron | 45.0% | |
| TTCCGCGTTATGTATCGTGA+AGG | - | chr7.3:7438376-7438395 | MS.gene25217:CDS | 45.0% | |
| ! | GACAGCTTTATGCGTCTCAT+GGG | - | chr7.3:7438577-7438596 | MS.gene25217:CDS | 45.0% |
| ! | TATGTTGCTGCTTGGTCCTT+TGG | + | chr7.3:7440891-7440910 | None:intergenic | 45.0% |
| ! | TGACAGCTTTATGCGTCTCA+TGG | - | chr7.3:7438576-7438595 | MS.gene25217:CDS | 45.0% |
| !! | GTGCTATTTGTTCTCCAGTC+TGG | + | chr7.3:7438936-7438955 | None:intergenic | 45.0% |
| CCTATAACAACACCAAGGGC+TGG | + | chr7.3:7439881-7439900 | None:intergenic | 50.0% | |
| CTCACAACACCCTTTGCTTC+AGG | + | chr7.3:7439348-7439367 | None:intergenic | 50.0% | |
| GCTTCTGCAGATGAAAGTGG+AGG | - | chr7.3:7438094-7438113 | MS.gene25217:intron | 50.0% | |
| GTGTGCCTGAATGAACCGAA+AGG | + | chr7.3:7441216-7441235 | None:intergenic | 50.0% | |
| TCCATGGCCACTGTCTACAA+GGG | - | chr7.3:7439081-7439100 | MS.gene25217:CDS | 50.0% | |
| TCCCGTAGTATGTTGCTGCT+TGG | + | chr7.3:7440899-7440918 | None:intergenic | 50.0% | |
| TGTTTGCAGAAGGTCCAGAC+TGG | - | chr7.3:7438919-7438938 | MS.gene25217:CDS | 50.0% | |
| TTCGGTTCATTCAGGCACAC+AGG | - | chr7.3:7441216-7441235 | MS.gene25217:CDS | 50.0% | |
| TTCTGACACTAACCAGCCCT+TGG | - | chr7.3:7439866-7439885 | MS.gene25217:intron | 50.0% | |
| !! | CCAGCCCTTGGTGTTGTTAT+AGG | - | chr7.3:7439878-7439897 | MS.gene25217:intron | 50.0% |
| ACAGCCTCCCTTGTAGACAG+TGG | + | chr7.3:7439091-7439110 | None:intergenic | 55.0% | |
| ATGGCCACTGTCTACAAGGG+AGG | - | chr7.3:7439084-7439103 | MS.gene25217:CDS | 55.0% | |
| CGGCGACAAAGAATTCGGCA+AGG | - | chr7.3:7439920-7439939 | MS.gene25217:CDS | 55.0% | |
| CTCCATGGCCACTGTCTACA+AGG | - | chr7.3:7439080-7439099 | MS.gene25217:CDS | 55.0% | |
| CTTGTAGACAGTGGCCATGG+AGG | + | chr7.3:7439082-7439101 | None:intergenic | 55.0% | |
| TCCCTTGTAGACAGTGGCCA+TGG | + | chr7.3:7439085-7439104 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 7437801 | 7441255 | 7437801 | ID=MS.gene25217 |
| chr7.3 | mRNA | 7437801 | 7441255 | 7437801 | ID=MS.gene25217.t1;Parent=MS.gene25217 |
| chr7.3 | exon | 7441111 | 7441255 | 7441111 | ID=MS.gene25217.t1.exon1;Parent=MS.gene25217.t1 |
| chr7.3 | CDS | 7441111 | 7441255 | 7441111 | ID=cds.MS.gene25217.t1;Parent=MS.gene25217.t1 |
| chr7.3 | exon | 7440912 | 7441027 | 7440912 | ID=MS.gene25217.t1.exon2;Parent=MS.gene25217.t1 |
| chr7.3 | CDS | 7440912 | 7441027 | 7440912 | ID=cds.MS.gene25217.t1;Parent=MS.gene25217.t1 |
| chr7.3 | exon | 7440593 | 7440701 | 7440593 | ID=MS.gene25217.t1.exon3;Parent=MS.gene25217.t1 |
| chr7.3 | CDS | 7440593 | 7440701 | 7440593 | ID=cds.MS.gene25217.t1;Parent=MS.gene25217.t1 |
| chr7.3 | exon | 7440435 | 7440474 | 7440435 | ID=MS.gene25217.t1.exon4;Parent=MS.gene25217.t1 |
| chr7.3 | CDS | 7440435 | 7440474 | 7440435 | ID=cds.MS.gene25217.t1;Parent=MS.gene25217.t1 |
| chr7.3 | exon | 7440094 | 7440183 | 7440094 | ID=MS.gene25217.t1.exon5;Parent=MS.gene25217.t1 |
| chr7.3 | CDS | 7440094 | 7440183 | 7440094 | ID=cds.MS.gene25217.t1;Parent=MS.gene25217.t1 |
| chr7.3 | exon | 7439885 | 7439984 | 7439885 | ID=MS.gene25217.t1.exon6;Parent=MS.gene25217.t1 |
| chr7.3 | CDS | 7439885 | 7439984 | 7439885 | ID=cds.MS.gene25217.t1;Parent=MS.gene25217.t1 |
| chr7.3 | exon | 7439629 | 7439768 | 7439629 | ID=MS.gene25217.t1.exon7;Parent=MS.gene25217.t1 |
| chr7.3 | CDS | 7439629 | 7439768 | 7439629 | ID=cds.MS.gene25217.t1;Parent=MS.gene25217.t1 |
| chr7.3 | exon | 7439255 | 7439357 | 7439255 | ID=MS.gene25217.t1.exon8;Parent=MS.gene25217.t1 |
| chr7.3 | CDS | 7439255 | 7439357 | 7439255 | ID=cds.MS.gene25217.t1;Parent=MS.gene25217.t1 |
| chr7.3 | exon | 7438136 | 7439156 | 7438136 | ID=MS.gene25217.t1.exon9;Parent=MS.gene25217.t1 |
| chr7.3 | CDS | 7438136 | 7439156 | 7438136 | ID=cds.MS.gene25217.t1;Parent=MS.gene25217.t1 |
| chr7.3 | exon | 7437801 | 7437826 | 7437801 | ID=MS.gene25217.t1.exon10;Parent=MS.gene25217.t1 |
| chr7.3 | CDS | 7437801 | 7437826 | 7437801 | ID=cds.MS.gene25217.t1;Parent=MS.gene25217.t1 |
| Gene Sequence |
| Protein sequence |
